Started by upstream project "Trigger" build number 16 originally caused by: Started by timer Obtained Jenkinsfile from git https://github.com/snoopycrimecop/omero-build.git [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-build-build [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: NONE No credentials specified Cloning the remote Git repository Cloning repository https://github.com/snoopycrimecop/omero-build.git > git init /home/omero/workspace/OMERO-build-build # timeout=10 Fetching upstream changes from https://github.com/snoopycrimecop/omero-build.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/omero-build.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch Checking out Revision 3cf853b1d45998740a4983da617f2b1af20ecfbe (origin/merge_ci) Commit message: "Update component versions" First time build. Skipping changelog. > git config remote.origin.url https://github.com/snoopycrimecop/omero-build.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse origin/merge_ci^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 3cf853b1d45998740a4983da617f2b1af20ecfbe # timeout=10 > git rev-list --no-walk 7aaaf55cf4fb111bb8d639fa41d3df87ead406ff # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 Using shallow submodule update with depth 1 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-model.url # timeout=10 > git config -f .gitmodules --get submodule.omero-model.path # timeout=10 > git config --get submodule.omero-common.url # timeout=10 > git config -f .gitmodules --get submodule.omero-common.path # timeout=10 > git config --get submodule.omero-romio.url # timeout=10 > git config -f .gitmodules --get submodule.omero-romio.path # timeout=10 > git config --get submodule.omero-renderer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-renderer.path # timeout=10 > git config --get submodule.omero-server.url # timeout=10 > git config -f .gitmodules --get submodule.omero-server.path # timeout=10 > git config --get submodule.omero-blitz.url # timeout=10 > git config -f .gitmodules --get submodule.omero-blitz.path # timeout=10 > git config --get submodule.omero-gateway-java.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gateway-java.path # timeout=10 > git submodule update --init --recursive --depth=1 omero-model # timeout=10 > git submodule update --init --recursive --depth=1 omero-common # timeout=10 > git submodule update --init --recursive --depth=1 omero-romio # timeout=10 > git submodule update --init --recursive --depth=1 omero-renderer # timeout=10 > git submodule update --init --recursive --depth=1 omero-server # timeout=10 > git submodule update --init --recursive --depth=1 omero-blitz # timeout=10 > git submodule update --init --recursive --depth=1 omero-gateway-java # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Versions) [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-gradle-plugins-build" build number 18 [Pipeline] sh + mkdir /home/omero/workspace/OMERO-build-build/build + cd /home/omero/workspace/OMERO-build-build/build + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + export PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/omero/workspace/OMERO-build-build/build/build-infra-master/ + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/omero/workspace/OMERO-build-build/build/build-infra-master/ + cd .. + find . -name version.properties -exec cp '{}' . ';' cp: './version.properties' and './version.properties' are the same file + test -e version.properties + foreach-get-version-as-property [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Build) [Pipeline] sh + gradle --init-script init-ci.gradle publishToMavenLocal --refresh-dependencies To honour the JVM settings for this build a single-use Daemon process will be forked. See https://docs.gradle.org/6.9.3/userguide/gradle_daemon.html#sec:disabling_the_daemon. Daemon will be stopped at the end of the build Maven publication 'omeroModel' pom metadata warnings (silence with 'suppressPomMetadataWarningsFor(variant)'): - Variant apiElements: - contains dependencies that cannot be represented in a published pom file. - com.google.guava:guava:32.0.1-jre declared with Gradle attributes These issues indicate information that is lost in the published 'pom' metadata file, which may be an issue if the published library is consumed by an old Gradle version or Apache Maven. The 'module' metadata file, which is used by Gradle 6+ is not affected. > Task :omero-gateway-java:processResources NO-SOURCE > Task :omero-romio:processResources NO-SOURCE > Task :omero-renderer:processResources NO-SOURCE > Task :omero-gateway-java:generatePomFileForOmeroGatewayPublication > Task :omero-romio:generatePomFileForOmeroRomioPublication > Task :omero-renderer:generatePomFileForOmeroRendererPublication > Task :omero-common:processResources > Task :omero-common:generatePomFileForOmeroCommonPublication > Task :omero-model:generateEnumsPsql > Task :omero-model:generateHibernatePsql > Task :omero-romio:sourcesJar > Task :omero-server:compileSlice > Task :omero-renderer:sourcesJar > Task :omero-blitz:processResources > Task :omero-blitz:generatePomFileForOmeroBlitzPublication > Task :omero-common:sourcesJar > Task :omero-gateway-java:sourcesJar > Task :omero-server:processResources > Task :omero-server:generatePomFileForOmeroServerPublication > Task :omero-blitz:sourcesJar > Task :omero-model:generateJavaPsql > Task :omero-model:generateSqlPsql > Task :omero-server:sourcesJar > Task :omero-model:compileJava Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-model:processResources > Task :omero-model:classes > Task :omero-model:jar > Task :omero-model:generateMetadataFileForOmeroModelPublication > Task :omero-model:generatePomFileForOmeroModelPublication > Task :omero-model:javadoc > Task :omero-model:javadocJar > Task :omero-model:sourcesJar > Task :omero-model:publishOmeroModelPublicationToMavenLocal > Task :omero-model:publishToMavenLocal > Task :omero-common:compileJava Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-common:classes > Task :omero-common:jar > Task :omero-common:generateMetadataFileForOmeroCommonPublication > Task :omero-common:javadoc > Task :omero-common:javadocJar > Task :omero-common:publishOmeroCommonPublicationToMavenLocal > Task :omero-common:publishToMavenLocal > Task :omero-romio:compileJava Note: /home/omero/workspace/OMERO-build-build/omero-romio/src/main/java/ome/io/bioformats/BfPixelBuffer.java uses or overrides a deprecated API. Note: Recompile with -Xlint:deprecation for details. > Task :omero-romio:classes > Task :omero-romio:jar > Task :omero-romio:generateMetadataFileForOmeroRomioPublication > Task :omero-romio:javadoc > Task :omero-romio:javadocJar > Task :omero-romio:publishOmeroRomioPublicationToMavenLocal > Task :omero-romio:publishToMavenLocal > Task :omero-renderer:compileJava Note: /home/omero/workspace/OMERO-build-build/omero-renderer/src/main/java/omeis/providers/re/Renderer.java uses or overrides a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-renderer:classes > Task :omero-renderer:jar > Task :omero-renderer:generateMetadataFileForOmeroRendererPublication > Task :omero-renderer:javadoc > Task :omero-renderer:javadocJar > Task :omero-renderer:publishOmeroRendererPublicationToMavenLocal > Task :omero-renderer:publishToMavenLocal > Task :omero-server:compileJava Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-server:classes > Task :omero-server:jar > Task :omero-server:generateMetadataFileForOmeroServerPublication > Task :omero-blitz:importDatabaseTypes > Task :omero-blitz:importMappings > Task :omero-server:javadoc /home/omero/workspace/OMERO-build-build/omero-server/src/main/java/ome/api/local/LocalSession.java:19: warning - Tag @link: reference not found: #getSession() > Task :omero-blitz:generateCombinedPsql > Task :omero-server:javadoc /home/omero/workspace/OMERO-build-build/omero-server/src/main/java/ome/api/local/LocalSession.java:19: warning - Tag @link: reference not found: #getSession() 2 warnings > Task :omero-blitz:generateIce > Task :omero-blitz:copySliceFiles > Task :omero-server:javadocJar > Task :omero-server:publishOmeroServerPublicationToMavenLocal > Task :omero-server:publishToMavenLocal > Task :omero-blitz:compileSlice > Task :omero-blitz:generateIceMapPsql > Task :omero-blitz:generateJava > Task :omero-blitz:generateModelObjectFactoryRegistryPsql > Task :omero-blitz:generatePython > Task :omero-blitz:pythonTaskOmero > Task :omero-blitz:pythonTaskOmeroApi > Task :omero-blitz:pythonTaskOmeroCmd > Task :omero-blitz:pythonTaskOmeroModel > Task :omero-blitz:pythonTaskGroup > Task :omero-blitz:generateObjectFactoryRegistrarPsql > Task :omero-blitz:pythonZip > Task :omero-blitz:compileJava > Task :omero-blitz:compileIcedoc > Task :omero-blitz:zipIcedoc > Task :omero-blitz:compileJava Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-blitz:classes > Task :omero-blitz:jar > Task :omero-blitz:generateMetadataFileForOmeroBlitzPublication > Task :omero-gateway-java:compileJava > Task :omero-blitz:javadoc /home/omero/workspace/OMERO-build-build/omero-blitz/build/psql/ice36/omero/api/_ThumbnailStoreDisp.java:555: warning - Tag @link: reference not found: #setPixelsId /home/omero/workspace/OMERO-build-build/omero-blitz/build/psql/ice36/omero/api/_ThumbnailStoreOperations.java:402: warning - Tag @link: reference not found: #setPixelsId /home/omero/workspace/OMERO-build-build/omero-blitz/build/psql/ice36/omero/api/_ThumbnailStoreOperationsNC.java:386: warning - Tag @link: reference not found: #setPixelsId 3 warnings > Task :omero-blitz:javadocJar > Task :omero-blitz:publishOmeroBlitzPublicationToMavenLocal > Task :omero-blitz:publishToMavenLocal > Task :omero-gateway-java:compileJava Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-gateway-java:classes > Task :omero-gateway-java:jar > Task :omero-gateway-java:generateMetadataFileForOmeroGatewayPublication > Task :omero-gateway-java:javadoc > Task :omero-gateway-java:javadocJar > Task :omero-gateway-java:publishOmeroGatewayPublicationToMavenLocal > Task :omero-gateway-java:publishToMavenLocal > Task :publishToMavenLocal Deprecated Gradle features were used in this build, making it incompatible with Gradle 7.0. Use '--warning-mode all' to show the individual deprecation warnings. See https://docs.gradle.org/6.9.3/userguide/command_line_interface.html#sec:command_line_warnings BUILD SUCCESSFUL in 26m 39s [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Deploy) [Pipeline] sh + gradle --init-script init-ci.gradle publish To honour the JVM settings for this build a single-use Daemon process will be forked. See https://docs.gradle.org/6.9.3/userguide/gradle_daemon.html#sec:disabling_the_daemon. Daemon will be stopped at the end of the build Maven publication 'omeroModel' pom metadata warnings (silence with 'suppressPomMetadataWarningsFor(variant)'): - Variant apiElements: - contains dependencies that cannot be represented in a published pom file. - com.google.guava:guava:32.0.1-jre declared with Gradle attributes These issues indicate information that is lost in the published 'pom' metadata file, which may be an issue if the published library is consumed by an old Gradle version or Apache Maven. The 'module' metadata file, which is used by Gradle 6+ is not affected. > Task :omero-romio:processResources NO-SOURCE > Task :omero-renderer:processResources NO-SOURCE > Task :omero-gateway-java:processResources NO-SOURCE > Task :omero-common:processResources UP-TO-DATE > Task :omero-model:generateEnumsPsql UP-TO-DATE > Task :omero-romio:generatePomFileForOmeroRomioPublication > Task :omero-common:generatePomFileForOmeroCommonPublication > Task :omero-model:generateHibernatePsql UP-TO-DATE > Task :omero-blitz:processResources UP-TO-DATE > Task :omero-renderer:generatePomFileForOmeroRendererPublication > Task :omero-gateway-java:generatePomFileForOmeroGatewayPublication > Task :omero-blitz:generatePomFileForOmeroBlitzPublication > Task :omero-romio:sourcesJar UP-TO-DATE > Task :omero-renderer:sourcesJar UP-TO-DATE > Task :omero-gateway-java:sourcesJar UP-TO-DATE > Task :omero-common:sourcesJar UP-TO-DATE > Task :omero-model:generateJavaPsql UP-TO-DATE > Task :omero-model:generateSqlPsql UP-TO-DATE > Task :omero-model:compileJava UP-TO-DATE > Task :omero-model:processResources UP-TO-DATE > Task :omero-model:classes UP-TO-DATE > Task :omero-model:jar UP-TO-DATE > Task :omero-server:compileSlice > Task :omero-model:generateMetadataFileForOmeroModelPublication > Task :omero-model:generatePomFileForOmeroModelPublication > Task :omero-server:processResources UP-TO-DATE > Task :omero-server:generatePomFileForOmeroServerPublication > Task :omero-model:javadoc UP-TO-DATE > Task :omero-model:javadocJar UP-TO-DATE > Task :omero-model:sourcesJar UP-TO-DATE > Task :omero-server:sourcesJar > Task :omero-model:publishOmeroModelPublicationToMavenRepository > Task :omero-model:publish > Task :omero-common:compileJava UP-TO-DATE > Task :omero-common:classes UP-TO-DATE > Task :omero-common:jar UP-TO-DATE > Task :omero-common:generateMetadataFileForOmeroCommonPublication > Task :omero-common:javadoc UP-TO-DATE > Task :omero-common:javadocJar UP-TO-DATE > Task :omero-romio:compileJava UP-TO-DATE > Task :omero-romio:classes UP-TO-DATE > Task :omero-romio:jar UP-TO-DATE > Task :omero-romio:generateMetadataFileForOmeroRomioPublication > Task :omero-romio:javadoc UP-TO-DATE > Task :omero-romio:javadocJar UP-TO-DATE > Task :omero-common:publishOmeroCommonPublicationToMavenRepository > Task :omero-common:publish > Task :omero-romio:publishOmeroRomioPublicationToMavenRepository > Task :omero-romio:publish > Task :omero-renderer:compileJava UP-TO-DATE > Task :omero-renderer:classes UP-TO-DATE > Task :omero-renderer:jar UP-TO-DATE > Task :omero-renderer:generateMetadataFileForOmeroRendererPublication > Task :omero-renderer:javadoc UP-TO-DATE > Task :omero-renderer:javadocJar UP-TO-DATE > Task :omero-blitz:sourcesJar > Task :omero-renderer:publishOmeroRendererPublicationToMavenRepository > Task :omero-renderer:publish > Task :omero-server:compileJava UP-TO-DATE > Task :omero-server:classes UP-TO-DATE > Task :omero-server:jar UP-TO-DATE > Task :omero-blitz:importDatabaseTypes UP-TO-DATE > Task :omero-server:generateMetadataFileForOmeroServerPublication > Task :omero-blitz:importMappings UP-TO-DATE > Task :omero-blitz:generateCombinedPsql UP-TO-DATE > Task :omero-blitz:generateIce UP-TO-DATE > Task :omero-blitz:copySliceFiles UP-TO-DATE > Task :omero-server:javadoc UP-TO-DATE > Task :omero-server:javadocJar UP-TO-DATE > Task :omero-server:publishOmeroServerPublicationToMavenRepository > Task :omero-server:publish > Task :omero-blitz:compileSlice > Task :omero-blitz:generateIceMapPsql UP-TO-DATE > Task :omero-blitz:generateJava UP-TO-DATE > Task :omero-blitz:generateModelObjectFactoryRegistryPsql UP-TO-DATE > Task :omero-blitz:generatePython UP-TO-DATE > Task :omero-blitz:pythonTaskOmero > Task :omero-blitz:pythonTaskOmeroApi > Task :omero-blitz:pythonTaskOmeroCmd > Task :omero-blitz:pythonTaskOmeroModel UP-TO-DATE > Task :omero-blitz:pythonTaskGroup > Task :omero-blitz:generateObjectFactoryRegistrarPsql UP-TO-DATE > Task :omero-blitz:compileJava UP-TO-DATE > Task :omero-blitz:classes UP-TO-DATE > Task :omero-blitz:jar UP-TO-DATE > Task :omero-blitz:generateMetadataFileForOmeroBlitzPublication > Task :omero-blitz:javadoc UP-TO-DATE > Task :omero-blitz:javadocJar UP-TO-DATE > Task :omero-blitz:pythonZip UP-TO-DATE > Task :omero-blitz:compileIcedoc UP-TO-DATE > Task :omero-blitz:zipIcedoc UP-TO-DATE > Task :omero-blitz:publishOmeroBlitzPublicationToMavenRepository > Task :omero-blitz:publish > Task :omero-gateway-java:compileJava UP-TO-DATE > Task :omero-gateway-java:classes UP-TO-DATE > Task :omero-gateway-java:jar UP-TO-DATE > Task :omero-gateway-java:generateMetadataFileForOmeroGatewayPublication > Task :omero-gateway-java:javadoc UP-TO-DATE > Task :omero-gateway-java:javadocJar UP-TO-DATE > Task :omero-gateway-java:publishOmeroGatewayPublicationToMavenRepository > Task :omero-gateway-java:publish > Task :publish Deprecated Gradle features were used in this build, making it incompatible with Gradle 7.0. Use '--warning-mode all' to show the individual deprecation warnings. See https://docs.gradle.org/6.9.3/userguide/command_line_interface.html#sec:command_line_warnings BUILD SUCCESSFUL in 2m 30s [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] deleteDir [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS