Started by upstream project "Trigger" build number 23 originally caused by: Started by user devspace Obtained Jenkinsfile from git https://github.com/snoopycrimecop/omero-build.git [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-build-build [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: NONE No credentials specified Cloning the remote Git repository Cloning repository https://github.com/snoopycrimecop/omero-build.git > git init /home/omero/workspace/OMERO-build-build # timeout=10 Fetching upstream changes from https://github.com/snoopycrimecop/omero-build.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/omero-build.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch Checking out Revision e11ce98aed0b3436747d323165b7e5fcd4a77141 (origin/merge_ci) Commit message: "Update component versions" First time build. Skipping changelog. Using shallow submodule update with depth 1 > git config remote.origin.url https://github.com/snoopycrimecop/omero-build.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse origin/merge_ci^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f e11ce98aed0b3436747d323165b7e5fcd4a77141 # timeout=10 > git rev-list --no-walk bd18c3722bbb4f11035a234bee9b72c9b6f2364a # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-model.url # timeout=10 > git config -f .gitmodules --get submodule.omero-model.path # timeout=10 > git config --get submodule.omero-common.url # timeout=10 > git config -f .gitmodules --get submodule.omero-common.path # timeout=10 > git config --get submodule.omero-romio.url # timeout=10 > git config -f .gitmodules --get submodule.omero-romio.path # timeout=10 > git config --get submodule.omero-renderer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-renderer.path # timeout=10 > git config --get submodule.omero-server.url # timeout=10 > git config -f .gitmodules --get submodule.omero-server.path # timeout=10 > git config --get submodule.omero-blitz.url # timeout=10 > git config -f .gitmodules --get submodule.omero-blitz.path # timeout=10 > git config --get submodule.omero-gateway-java.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gateway-java.path # timeout=10 > git submodule update --init --recursive --depth=1 omero-model # timeout=10 > git submodule update --init --recursive --depth=1 omero-common # timeout=10 > git submodule update --init --recursive --depth=1 omero-romio # timeout=10 > git submodule update --init --recursive --depth=1 omero-renderer # timeout=10 > git submodule update --init --recursive --depth=1 omero-server # timeout=10 > git submodule update --init --recursive --depth=1 omero-blitz # timeout=10 > git submodule update --init --recursive --depth=1 omero-gateway-java # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Versions) [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-gradle-plugins-build" build number 23 [Pipeline] sh + mkdir /home/omero/workspace/OMERO-build-build/build + cd /home/omero/workspace/OMERO-build-build/build + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + export PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/omero/workspace/OMERO-build-build/build/build-infra-master/ + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/omero/workspace/OMERO-build-build/build/build-infra-master/ + cd .. + find . -name version.properties -exec cp '{}' . ';' cp: './version.properties' and './version.properties' are the same file + test -e version.properties + foreach-get-version-as-property [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Build) [Pipeline] sh + gradle --init-script init-ci.gradle publishToMavenLocal --refresh-dependencies To honour the JVM settings for this build a single-use Daemon process will be forked. See https://docs.gradle.org/6.9.3/userguide/gradle_daemon.html#sec:disabling_the_daemon. Daemon will be stopped at the end of the build Maven publication 'omeroModel' pom metadata warnings (silence with 'suppressPomMetadataWarningsFor(variant)'): - Variant apiElements: - contains dependencies that cannot be represented in a published pom file. - com.google.guava:guava:32.0.1-jre declared with Gradle attributes These issues indicate information that is lost in the published 'pom' metadata file, which may be an issue if the published library is consumed by an old Gradle version or Apache Maven. The 'module' metadata file, which is used by Gradle 6+ is not affected. > Task :omero-renderer:processResources NO-SOURCE > Task :omero-romio:processResources NO-SOURCE > Task :omero-gateway-java:processResources NO-SOURCE > Task :omero-gateway-java:generatePomFileForOmeroGatewayPublication > Task :omero-romio:generatePomFileForOmeroRomioPublication > Task :omero-renderer:generatePomFileForOmeroRendererPublication > Task :omero-common:processResources > Task :omero-common:generatePomFileForOmeroCommonPublication > Task :omero-model:generateEnumsPsql > Task :omero-model:generateHibernatePsql > Task :omero-romio:sourcesJar > Task :omero-server:compileSlice > Task :omero-renderer:sourcesJar > Task :omero-blitz:processResources > Task :omero-blitz:generatePomFileForOmeroBlitzPublication > Task :omero-common:sourcesJar > Task :omero-gateway-java:sourcesJar > Task :omero-server:processResources > Task :omero-server:generatePomFileForOmeroServerPublication > Task :omero-blitz:sourcesJar > Task :omero-model:generateJavaPsql > Task :omero-model:generateSqlPsql > Task :omero-server:sourcesJar > Task :omero-model:compileJava Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-model:processResources > Task :omero-model:classes > Task :omero-model:jar > Task :omero-model:generateMetadataFileForOmeroModelPublication > Task :omero-model:generatePomFileForOmeroModelPublication > Task :omero-model:javadoc > Task :omero-model:javadocJar > Task :omero-model:sourcesJar > Task :omero-model:publishOmeroModelPublicationToMavenLocal > Task :omero-model:publishToMavenLocal > Task :omero-common:compileJava Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-common:classes > Task :omero-common:jar > Task :omero-common:generateMetadataFileForOmeroCommonPublication > Task :omero-common:javadoc > Task :omero-common:javadocJar > Task :omero-common:publishOmeroCommonPublicationToMavenLocal > Task :omero-common:publishToMavenLocal > Task :omero-romio:compileJava Note: /home/omero/workspace/OMERO-build-build/omero-romio/src/main/java/ome/io/bioformats/BfPixelBuffer.java uses or overrides a deprecated API. Note: Recompile with -Xlint:deprecation for details. > Task :omero-romio:classes > Task :omero-romio:jar > Task :omero-romio:generateMetadataFileForOmeroRomioPublication > Task :omero-romio:javadoc > Task :omero-romio:javadocJar > Task :omero-romio:publishOmeroRomioPublicationToMavenLocal > Task :omero-romio:publishToMavenLocal > Task :omero-renderer:compileJava Note: /home/omero/workspace/OMERO-build-build/omero-renderer/src/main/java/omeis/providers/re/Renderer.java uses or overrides a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-renderer:classes > Task :omero-renderer:jar > Task :omero-renderer:generateMetadataFileForOmeroRendererPublication > Task :omero-renderer:javadoc > Task :omero-renderer:javadocJar > Task :omero-renderer:publishOmeroRendererPublicationToMavenLocal > Task :omero-renderer:publishToMavenLocal > Task :omero-server:compileJava Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-server:classes > Task :omero-server:jar > Task :omero-server:generateMetadataFileForOmeroServerPublication > Task :omero-blitz:importDatabaseTypes > Task :omero-blitz:importMappings > Task :omero-server:javadoc /home/omero/workspace/OMERO-build-build/omero-server/src/main/java/ome/api/local/LocalSession.java:19: warning - Tag @link: reference not found: #getSession() > Task :omero-blitz:generateCombinedPsql > Task :omero-server:javadoc /home/omero/workspace/OMERO-build-build/omero-server/src/main/java/ome/api/local/LocalSession.java:19: warning - Tag @link: reference not found: #getSession() > Task :omero-blitz:generateIce > Task :omero-server:javadoc 2 warnings > Task :omero-blitz:copySliceFiles > Task :omero-server:javadocJar > Task :omero-server:publishOmeroServerPublicationToMavenLocal > Task :omero-server:publishToMavenLocal > Task :omero-blitz:compileSlice > Task :omero-blitz:generateIceMapPsql > Task :omero-blitz:generateJava > Task :omero-blitz:generateModelObjectFactoryRegistryPsql > Task :omero-blitz:generatePython > Task :omero-blitz:pythonTaskOmero > Task :omero-blitz:pythonTaskOmeroApi > Task :omero-blitz:pythonTaskOmeroCmd > Task :omero-blitz:pythonTaskOmeroModel > Task :omero-blitz:pythonTaskGroup > Task :omero-blitz:generateObjectFactoryRegistrarPsql > Task :omero-blitz:pythonZip > Task :omero-blitz:compileJava > Task :omero-blitz:compileIcedoc > Task :omero-blitz:zipIcedoc > Task :omero-blitz:compileJava Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-blitz:classes > Task :omero-blitz:jar > Task :omero-blitz:generateMetadataFileForOmeroBlitzPublication > Task :omero-gateway-java:compileJava > Task :omero-blitz:javadoc /home/omero/workspace/OMERO-build-build/omero-blitz/build/psql/ice36/omero/api/_ThumbnailStoreDisp.java:555: warning - Tag @link: reference not found: #setPixelsId /home/omero/workspace/OMERO-build-build/omero-blitz/build/psql/ice36/omero/api/_ThumbnailStoreOperations.java:402: warning - Tag @link: reference not found: #setPixelsId /home/omero/workspace/OMERO-build-build/omero-blitz/build/psql/ice36/omero/api/_ThumbnailStoreOperationsNC.java:386: warning - Tag @link: reference not found: #setPixelsId 3 warnings > Task :omero-blitz:javadocJar > Task :omero-blitz:publishOmeroBlitzPublicationToMavenLocal > Task :omero-blitz:publishToMavenLocal > Task :omero-gateway-java:compileJava Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. > Task :omero-gateway-java:classes > Task :omero-gateway-java:jar > Task :omero-gateway-java:generateMetadataFileForOmeroGatewayPublication > Task :omero-gateway-java:javadoc > Task :omero-gateway-java:javadocJar > Task :omero-gateway-java:publishOmeroGatewayPublicationToMavenLocal > Task :omero-gateway-java:publishToMavenLocal > Task :publishToMavenLocal Deprecated Gradle features were used in this build, making it incompatible with Gradle 7.0. Use '--warning-mode all' to show the individual deprecation warnings. See https://docs.gradle.org/6.9.3/userguide/command_line_interface.html#sec:command_line_warnings BUILD SUCCESSFUL in 26m 57s [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Deploy) [Pipeline] sh + gradle --init-script init-ci.gradle publish To honour the JVM settings for this build a single-use Daemon process will be forked. See https://docs.gradle.org/6.9.3/userguide/gradle_daemon.html#sec:disabling_the_daemon. Daemon will be stopped at the end of the build Maven publication 'omeroModel' pom metadata warnings (silence with 'suppressPomMetadataWarningsFor(variant)'): - Variant apiElements: - contains dependencies that cannot be represented in a published pom file. - com.google.guava:guava:32.0.1-jre declared with Gradle attributes These issues indicate information that is lost in the published 'pom' metadata file, which may be an issue if the published library is consumed by an old Gradle version or Apache Maven. The 'module' metadata file, which is used by Gradle 6+ is not affected. > Task :omero-romio:processResources NO-SOURCE > Task :omero-gateway-java:processResources NO-SOURCE > Task :omero-renderer:processResources NO-SOURCE > Task :omero-common:processResources UP-TO-DATE > Task :omero-model:generateEnumsPsql UP-TO-DATE > Task :omero-model:generateHibernatePsql UP-TO-DATE > Task :omero-common:generatePomFileForOmeroCommonPublication > Task :omero-renderer:generatePomFileForOmeroRendererPublication > Task :omero-gateway-java:generatePomFileForOmeroGatewayPublication > Task :omero-romio:generatePomFileForOmeroRomioPublication > Task :omero-blitz:processResources UP-TO-DATE > Task :omero-blitz:generatePomFileForOmeroBlitzPublication > Task :omero-romio:sourcesJar UP-TO-DATE > Task :omero-renderer:sourcesJar UP-TO-DATE > Task :omero-gateway-java:sourcesJar UP-TO-DATE > Task :omero-model:generateJavaPsql UP-TO-DATE > Task :omero-model:generateSqlPsql UP-TO-DATE > Task :omero-common:sourcesJar UP-TO-DATE > Task :omero-model:compileJava UP-TO-DATE > Task :omero-server:compileSlice > Task :omero-model:processResources UP-TO-DATE > Task :omero-model:classes UP-TO-DATE > Task :omero-model:jar UP-TO-DATE > Task :omero-server:processResources UP-TO-DATE > Task :omero-model:generateMetadataFileForOmeroModelPublication > Task :omero-model:generatePomFileForOmeroModelPublication > Task :omero-server:generatePomFileForOmeroServerPublication > Task :omero-model:javadoc UP-TO-DATE > Task :omero-model:javadocJar UP-TO-DATE > Task :omero-model:sourcesJar UP-TO-DATE > Task :omero-server:sourcesJar > Task :omero-model:publishOmeroModelPublicationToMavenRepository > Task :omero-model:publish > Task :omero-common:compileJava UP-TO-DATE > Task :omero-common:classes UP-TO-DATE > Task :omero-common:jar UP-TO-DATE > Task :omero-common:generateMetadataFileForOmeroCommonPublication > Task :omero-common:javadoc UP-TO-DATE > Task :omero-common:javadocJar UP-TO-DATE > Task :omero-common:publishOmeroCommonPublicationToMavenRepository > Task :omero-common:publish > Task :omero-romio:compileJava UP-TO-DATE > Task :omero-romio:classes UP-TO-DATE > Task :omero-romio:jar UP-TO-DATE > Task :omero-romio:generateMetadataFileForOmeroRomioPublication > Task :omero-romio:javadoc UP-TO-DATE > Task :omero-romio:javadocJar UP-TO-DATE > Task :omero-romio:publishOmeroRomioPublicationToMavenRepository > Task :omero-romio:publish > Task :omero-renderer:compileJava UP-TO-DATE > Task :omero-renderer:classes UP-TO-DATE > Task :omero-renderer:jar UP-TO-DATE > Task :omero-renderer:generateMetadataFileForOmeroRendererPublication > Task :omero-renderer:javadoc UP-TO-DATE > Task :omero-renderer:javadocJar UP-TO-DATE > Task :omero-blitz:sourcesJar > Task :omero-renderer:publishOmeroRendererPublicationToMavenRepository > Task :omero-renderer:publish > Task :omero-server:compileJava UP-TO-DATE > Task :omero-server:classes UP-TO-DATE > Task :omero-server:jar UP-TO-DATE > Task :omero-blitz:importDatabaseTypes UP-TO-DATE > Task :omero-blitz:importMappings UP-TO-DATE > Task :omero-server:generateMetadataFileForOmeroServerPublication > Task :omero-blitz:generateCombinedPsql UP-TO-DATE > Task :omero-blitz:generateIce UP-TO-DATE > Task :omero-blitz:copySliceFiles UP-TO-DATE > Task :omero-server:javadoc UP-TO-DATE > Task :omero-server:javadocJar UP-TO-DATE > Task :omero-server:publishOmeroServerPublicationToMavenRepository > Task :omero-server:publish > Task :omero-blitz:compileSlice > Task :omero-blitz:generateIceMapPsql UP-TO-DATE > Task :omero-blitz:generateJava UP-TO-DATE > Task :omero-blitz:generateModelObjectFactoryRegistryPsql UP-TO-DATE > Task :omero-blitz:generatePython UP-TO-DATE > Task :omero-blitz:pythonTaskOmero > Task :omero-blitz:pythonTaskOmeroApi > Task :omero-blitz:pythonTaskOmeroCmd > Task :omero-blitz:pythonTaskOmeroModel UP-TO-DATE > Task :omero-blitz:pythonTaskGroup > Task :omero-blitz:generateObjectFactoryRegistrarPsql UP-TO-DATE > Task :omero-blitz:pythonZip UP-TO-DATE > Task :omero-blitz:compileIcedoc UP-TO-DATE > Task :omero-blitz:zipIcedoc UP-TO-DATE > Task :omero-blitz:compileJava UP-TO-DATE > Task :omero-blitz:classes UP-TO-DATE > Task :omero-blitz:jar UP-TO-DATE > Task :omero-blitz:generateMetadataFileForOmeroBlitzPublication > Task :omero-blitz:javadoc UP-TO-DATE > Task :omero-blitz:javadocJar UP-TO-DATE > Task :omero-blitz:publishOmeroBlitzPublicationToMavenRepository > Task :omero-blitz:publish > Task :omero-gateway-java:compileJava UP-TO-DATE > Task :omero-gateway-java:classes UP-TO-DATE > Task :omero-gateway-java:jar UP-TO-DATE > Task :omero-gateway-java:generateMetadataFileForOmeroGatewayPublication > Task :omero-gateway-java:javadoc UP-TO-DATE > Task :omero-gateway-java:javadocJar UP-TO-DATE > Task :omero-gateway-java:publishOmeroGatewayPublicationToMavenRepository > Task :omero-gateway-java:publish > Task :publish Deprecated Gradle features were used in this build, making it incompatible with Gradle 7.0. Use '--warning-mode all' to show the individual deprecation warnings. See https://docs.gradle.org/6.9.3/userguide/command_line_interface.html#sec:command_line_warnings BUILD SUCCESSFUL in 2m 59s [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] deleteDir [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS