Started by upstream project "Trigger" build number 109 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 17debd0389692e2455795d3c9d15b57151d5d590 (refs/remotes/origin/master) Commit message: "Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54" > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 17debd0389692e2455795d3c9d15b57151d5d590 # timeout=10 > git rev-list --no-walk 17debd0389692e2455795d3c9d15b57151d5d590 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 98 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.6.2-py3-none-any.whl (164 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.6.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-06-20 00:42:28,581 [ scc.config] DEBUG Found github.token 2024-06-20 00:42:28,583 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-20 00:42:28,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:42:29,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:42:29,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-20 00:42:29,575 [ scc.gh] DEBUG 3689 remaining from 5000 (Reset at 01:06 2024-06-20 00:42:29,576 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:42:29,579 [ scc.git] DEBUG Check current status 2024-06-20 00:42:29,580 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:42:29,583 [ scc.git] DEBUG 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54 2024-06-20 00:42:29,583 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:42:29,628 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-20 00:42:29,631 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-20 00:42:29,633 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-20 00:42:29,636 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-20 00:42:29,660 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-06-20 00:42:29,663 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-20 00:42:29,665 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-20 00:42:29,669 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-20 00:42:29,671 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-20 00:42:29,674 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-20 00:42:29,677 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-20 00:42:29,679 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-20 00:42:29,682 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-20 00:42:29,685 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-20 00:42:29,688 [ scc.git] DEBUG 7688c540375cf05252c31f216e0248b69a2659c2 omero-test-infra (v0.6.3-57-g7688c54) 2024-06-20 00:42:29,690 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-20 00:42:29,693 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-20 00:42:29,695 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-20 00:42:29,698 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-20 00:42:29,700 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-20 00:42:29,703 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-20 00:42:29,706 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-20 00:42:29,710 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:42:30,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-20 00:42:30,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:42:30,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:42:31,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:42:31,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:42:31,788 [ scc.git] DEBUG Resetting... 2024-06-20 00:42:31,788 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-20 00:42:31,797 [ scc.git] DEBUG HEAD is now at 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54 2024-06-20 00:42:31,797 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-20 00:42:31,898 [ scc.git] DEBUG Check current status 2024-06-20 00:42:31,898 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:42:31,903 [ scc.git] DEBUG 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54 2024-06-20 00:42:31,903 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:42:31,951 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-20 00:42:31,954 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-20 00:42:31,957 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-20 00:42:31,959 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-20 00:42:31,967 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-06-20 00:42:31,969 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-20 00:42:31,972 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-20 00:42:31,976 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-20 00:42:31,978 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-20 00:42:31,981 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-20 00:42:31,983 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-20 00:42:31,986 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-20 00:42:31,989 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-20 00:42:31,991 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-20 00:42:31,994 [ scc.git] DEBUG 7688c540375cf05252c31f216e0248b69a2659c2 omero-test-infra (v0.6.3-57-g7688c54) 2024-06-20 00:42:31,996 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-20 00:42:31,999 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-20 00:42:32,001 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-20 00:42:32,004 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-20 00:42:32,007 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-20 00:42:32,010 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-20 00:42:32,013 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-20 00:42:32,014 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-20 00:42:32,014 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-20 00:42:32,014 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-20 00:42:32,014 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-20 00:42:32,015 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-20 00:42:32,015 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:42:32,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-20 00:42:32,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/375 HTTP/1.1" 200 None 2024-06-20 00:42:32,769 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-20 00:42:32,769 [ scc.repo] DEBUG - PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`' 2024-06-20 00:42:33,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/373 HTTP/1.1" 200 None 2024-06-20 00:42:33,223 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-20 00:42:33,223 [ scc.repo] DEBUG - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-20 00:42:33,224 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:42:33,224 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:42:33,224 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:42:33,228 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:42:33,231 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:42:33,231 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:42:33,235 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:42:33,239 [ scc.git] DEBUG Already up to date. 2024-06-20 00:42:33,240 [ scc.git] DEBUG Calling 'git fetch origin pull/373/head' 2024-06-20 00:42:33,635 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-20 00:42:33,635 [ scc.git] DEBUG * branch refs/pull/373/head -> FETCH_HEAD 2024-06-20 00:42:33,640 [ scc.git] DEBUG Calling 'git fetch origin pull/375/head' 2024-06-20 00:42:34,038 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-20 00:42:34,039 [ scc.git] DEBUG * branch refs/pull/375/head -> FETCH_HEAD 2024-06-20 00:42:34,043 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:42:34,044 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:42:34,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:42:34,049 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-20 00:42:34,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:42:34,058 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 373 (Bump omero-test-infra from `7688c54` to `cda3ec6`) c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-20 00:42:34,075 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:42:34,077 [ scc.git] DEBUG omero-test-infra | 2 +- 2024-06-20 00:42:34,077 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-20 00:42:34,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:42:34,234 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...90e6cc95443ce4747893ad9176814fa340f114e8' 2024-06-20 00:42:34,241 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:42:34,246 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 375 (Bump omero-figure from `3d9e3b8` to `ffc7e07`) 90e6cc95443ce4747893ad9176814fa340f114e8' 2024-06-20 00:42:34,262 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:42:34,265 [ scc.git] DEBUG omero-figure | 2 +- 2024-06-20 00:42:34,265 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-20 00:42:34,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:42:34,646 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:42:34,712 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'ffc7e0758098d2dc59c1db60bece8f7c26b49c5e' 2024-06-20 00:42:34,725 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2024-06-20 00:42:34,726 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:42:34,726 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:42:34,731 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:42:35,031 [ scc.git] DEBUG has no local changes 2024-06-20 00:42:35,031 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' - PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:42:35,105 [ scc.git] DEBUG [detached HEAD 0149619] merge master -Dorg -Snone 2024-06-20 00:42:35,106 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-20 00:42:35,106 [ scc.merge] INFO Already up to date. 2024-06-20 00:42:35,106 [ scc.merge] INFO 2024-06-20 00:42:35,106 [ scc.merge] INFO Merged PRs: 2024-06-20 00:42:35,106 [ scc.merge] INFO - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-20 00:42:35,106 [ scc.merge] INFO - PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`' 2024-06-20 00:42:35,106 [ scc.merge] INFO 2024-06-20 00:42:35,106 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-20 00:42:35,106 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' From https://github.com/ome/omero-figure ffc7e075..9ffbc8b7 master -> origin/master Submodule path 'omero-figure': checked out '9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3' From https://github.com/ome/omero-iviewer * [new branch] dependabot/npm_and_yarn/multi-2d3aef8690 -> origin/dependabot/npm_and_yarn/multi-2d3aef8690 * [new branch] dependabot/npm_and_yarn/socket.io-4.7.5 -> origin/dependabot/npm_and_yarn/socket.io-4.7.5 7b7a637..a8f380f master -> origin/master Submodule path 'omero-iviewer': checked out 'a8f380fabfd839b946e5a5f613f1fce07abb3815' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-06-20 00:42:44,970 [ scc.config] DEBUG Found github.token 2024-06-20 00:42:44,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-20 00:42:45,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:42:45,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:42:46,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-20 00:42:46,015 [ scc.gh] DEBUG 3677 remaining from 5000 (Reset at 01:06 2024-06-20 00:42:46,016 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:42:46,036 [ scc.git] DEBUG Check current status 2024-06-20 00:42:46,037 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:42:46,050 [ scc.git] DEBUG 0149619 merge master -Dorg -Snone 2024-06-20 00:42:46,050 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:42:46,100 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-20 00:42:46,102 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-20 00:42:46,105 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-20 00:42:46,107 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-20 00:42:46,111 [ scc.git] DEBUG +9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-20 00:42:46,114 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-20 00:42:46,116 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-20 00:42:46,120 [ scc.git] DEBUG +a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-20 00:42:46,123 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-20 00:42:46,125 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-20 00:42:46,128 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-20 00:42:46,131 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-20 00:42:46,134 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-20 00:42:46,136 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-20 00:42:46,140 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-20 00:42:46,142 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-20 00:42:46,145 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-20 00:42:46,147 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-20 00:42:46,150 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-20 00:42:46,153 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-20 00:42:46,156 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-20 00:42:46,160 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-20 00:42:46,165 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:42:46,166 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-06-20 00:42:46,168 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-06-20 00:42:46,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-20 00:42:46,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:42:47,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:42:47,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:42:48,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:42:48,263 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:42:48,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-20 00:42:48,344 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:42:48,348 [ scc.git] DEBUG Check current status 2024-06-20 00:42:48,348 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:42:48,354 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-06-20 00:42:48,355 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:42:48,408 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:42:48,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-06-20 00:42:49,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:42:49,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:42:50,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:42:50,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:42:50,501 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:42:50,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:42:50,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-20 00:42:50,546 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:42:50,550 [ scc.git] DEBUG Check current status 2024-06-20 00:42:50,550 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:42:50,555 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-06-20 00:42:50,555 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:42:50,606 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:42:50,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-06-20 00:42:51,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:42:51,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:42:52,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:42:52,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:42:52,731 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:42:52,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:42:52,784 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-20 00:42:52,784 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:42:52,789 [ scc.git] DEBUG Check current status 2024-06-20 00:42:52,789 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:42:52,793 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-06-20 00:42:52,793 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:42:52,836 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:42:53,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-06-20 00:42:53,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:42:54,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:42:54,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:42:54,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:42:54,971 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:42:55,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:42:55,022 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-20 00:42:55,022 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:42:55,028 [ scc.git] DEBUG Check current status 2024-06-20 00:42:55,028 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:42:55,034 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-20 00:42:55,035 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:42:55,089 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:42:55,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-06-20 00:42:55,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:42:56,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:42:56,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:42:57,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:42:57,148 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:42:57,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:42:57,196 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-20 00:42:57,196 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:42:57,203 [ scc.git] DEBUG Check current status 2024-06-20 00:42:57,203 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:42:57,220 [ scc.git] DEBUG 9ffbc8b7 Merge pull request #570 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-06-20 00:42:57,220 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:42:57,269 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:42:57,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-06-20 00:42:58,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:42:58,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:42:59,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:42:59,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:42:59,439 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:42:59,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:42:59,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-20 00:42:59,483 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:42:59,487 [ scc.git] DEBUG Check current status 2024-06-20 00:42:59,487 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:42:59,492 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-20 00:42:59,492 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:42:59,541 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:42:59,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-06-20 00:43:00,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:00,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:01,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:01,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:01,642 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:01,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:01,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-20 00:43:01,687 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:43:01,691 [ scc.git] DEBUG Check current status 2024-06-20 00:43:01,691 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:01,695 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-06-20 00:43:01,695 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:01,740 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:43:02,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-06-20 00:43:02,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:03,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:03,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:03,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:03,897 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:03,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:03,938 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-20 00:43:03,938 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:43:03,943 [ scc.git] DEBUG Check current status 2024-06-20 00:43:03,943 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:03,948 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-06-20 00:43:03,949 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:03,992 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:43:04,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-06-20 00:43:04,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:05,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:05,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:06,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:06,107 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:06,154 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:06,155 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-20 00:43:06,155 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:43:06,161 [ scc.git] DEBUG Check current status 2024-06-20 00:43:06,161 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:06,166 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-06-20 00:43:06,167 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:06,214 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:43:06,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-06-20 00:43:07,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:07,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:07,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:08,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:08,319 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:08,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:08,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-20 00:43:08,366 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:43:08,372 [ scc.git] DEBUG Check current status 2024-06-20 00:43:08,372 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:08,376 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-20 00:43:08,377 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:08,419 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:43:08,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-06-20 00:43:09,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:09,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:10,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:10,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:10,593 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:10,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:10,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-20 00:43:10,643 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:43:10,650 [ scc.git] DEBUG Check current status 2024-06-20 00:43:10,650 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:10,656 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-06-20 00:43:10,656 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:10,707 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:43:11,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-06-20 00:43:11,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:11,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:12,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:12,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:12,938 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:12,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:12,982 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-20 00:43:12,982 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:43:12,989 [ scc.git] DEBUG Check current status 2024-06-20 00:43:12,990 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:12,995 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-06-20 00:43:12,995 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:13,044 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:43:13,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-06-20 00:43:13,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:14,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:14,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:15,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:15,165 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:15,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:15,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-20 00:43:15,209 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:43:15,215 [ scc.git] DEBUG Check current status 2024-06-20 00:43:15,215 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:15,219 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-06-20 00:43:15,219 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:15,265 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:43:15,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-06-20 00:43:16,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:16,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:16,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:17,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:17,421 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:17,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:17,476 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-20 00:43:17,476 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:43:17,484 [ scc.git] DEBUG Check current status 2024-06-20 00:43:17,484 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:17,491 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-20 00:43:17,491 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:17,546 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:43:17,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-06-20 00:43:18,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:18,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:19,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:19,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:19,648 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:19,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:19,695 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-20 00:43:19,695 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:43:19,701 [ scc.git] DEBUG Check current status 2024-06-20 00:43:19,701 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:19,707 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-06-20 00:43:19,707 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:19,764 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:43:20,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-20 00:43:20,060 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-20 00:43:20,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-06-20 00:43:20,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:21,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:21,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:22,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:22,059 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:22,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:22,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-20 00:43:22,102 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:43:22,107 [ scc.git] DEBUG Check current status 2024-06-20 00:43:22,108 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:22,112 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-06-20 00:43:22,112 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:22,157 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:43:22,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-06-20 00:43:22,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:23,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:23,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:24,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:24,338 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:24,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:24,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-20 00:43:24,377 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:43:24,382 [ scc.git] DEBUG Check current status 2024-06-20 00:43:24,382 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:24,387 [ scc.git] DEBUG deab817 update setup-python to v4 2024-06-20 00:43:24,388 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:24,435 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:43:24,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-06-20 00:43:25,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:25,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:26,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:26,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:26,554 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:26,595 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:26,596 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-20 00:43:26,596 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:43:26,602 [ scc.git] DEBUG Check current status 2024-06-20 00:43:26,602 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:26,608 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-20 00:43:26,608 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:26,654 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:43:26,654 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-06-20 00:43:27,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-06-20 00:43:27,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:27,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:28,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:28,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:28,760 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:28,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:28,800 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-20 00:43:28,800 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:43:28,805 [ scc.git] DEBUG Check current status 2024-06-20 00:43:28,805 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:28,809 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-20 00:43:28,810 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:28,852 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:43:29,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-20 00:43:29,188 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-20 00:43:29,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-06-20 00:43:29,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:30,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:30,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:31,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:31,151 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:31,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:31,193 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-20 00:43:31,193 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:43:31,198 [ scc.git] DEBUG Check current status 2024-06-20 00:43:31,198 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:31,203 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-06-20 00:43:31,203 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:31,249 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:43:31,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-20 00:43:31,573 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-20 00:43:31,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-06-20 00:43:32,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:32,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:33,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:33,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:33,559 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:33,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:33,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-20 00:43:33,604 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:43:33,610 [ scc.git] DEBUG Check current status 2024-06-20 00:43:33,610 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:33,615 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-20 00:43:33,615 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:33,663 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:43:34,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-06-20 00:43:34,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:34,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:35,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:35,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:35,792 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:35,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:35,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-20 00:43:35,847 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-20 00:43:35,854 [ scc.git] DEBUG Check current status 2024-06-20 00:43:35,854 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:35,874 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-06-20 00:43:35,875 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:35,926 [ scc.config] DEBUG Found remote.origin.url 2024-06-20 00:43:35,928 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-06-20 00:43:36,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-20 00:43:36,223 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-20 00:43:36,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-06-20 00:43:36,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-20 00:43:37,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-20 00:43:37,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-20 00:43:38,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-20 00:43:38,154 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:38,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:38,202 [ scc.git] DEBUG Resetting... 2024-06-20 00:43:38,202 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-20 00:43:38,214 [ scc.git] DEBUG HEAD is now at 0149619 merge master -Dorg -Snone 2024-06-20 00:43:38,215 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-20 00:43:38,283 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'ffc7e0758098d2dc59c1db60bece8f7c26b49c5e' 2024-06-20 00:43:38,309 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7b7a637c795fea1582f47a6cdec499f77cfcde1e' 2024-06-20 00:43:38,348 [ scc.git] DEBUG Check current status 2024-06-20 00:43:38,348 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-20 00:43:38,354 [ scc.git] DEBUG 0149619 merge master -Dorg -Snone 2024-06-20 00:43:38,355 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-20 00:43:38,406 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-20 00:43:38,409 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-20 00:43:38,411 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-20 00:43:38,414 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-20 00:43:38,418 [ scc.git] DEBUG ffc7e0758098d2dc59c1db60bece8f7c26b49c5e omero-figure (v7.0.0-1-gffc7e075) 2024-06-20 00:43:38,420 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-20 00:43:38,423 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-20 00:43:38,426 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-20 00:43:38,428 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-20 00:43:38,431 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-20 00:43:38,434 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-20 00:43:38,436 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-20 00:43:38,440 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-20 00:43:38,443 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-20 00:43:38,446 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-20 00:43:38,448 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-20 00:43:38,450 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-20 00:43:38,453 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-20 00:43:38,455 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-20 00:43:38,458 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-20 00:43:38,461 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-20 00:43:38,464 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-20 00:43:38,465 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-20 00:43:38,465 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-20 00:43:38,465 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-20 00:43:38,466 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-20 00:43:38,466 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-20 00:43:38,466 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-06-20 00:43:38,466 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:43:38,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-20 00:43:39,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/375 HTTP/1.1" 200 None 2024-06-20 00:43:39,192 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-20 00:43:39,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/90e6cc95443ce4747893ad9176814fa340f114e8 HTTP/1.1" 200 None 2024-06-20 00:43:40,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/90e6cc95443ce4747893ad9176814fa340f114e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:43:40,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/90e6cc95443ce4747893ad9176814fa340f114e8 HTTP/1.1" 200 None 2024-06-20 00:43:41,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/90e6cc95443ce4747893ad9176814fa340f114e8?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:43:41,169 [ scc.repo] DEBUG - PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`' 2024-06-20 00:43:41,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/373 HTTP/1.1" 200 None 2024-06-20 00:43:41,636 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-20 00:43:42,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc HTTP/1.1" 200 None 2024-06-20 00:43:42,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:43:43,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc HTTP/1.1" 200 None 2024-06-20 00:43:43,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/c8279eaae4892995e532fa290a1f76ace85afdbc?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:43:43,642 [ scc.repo] DEBUG - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-20 00:43:43,642 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:43:43,642 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:43:43,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:43:43,649 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:43:43,656 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:43:43,656 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:43:43,663 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:43:43,673 [ scc.git] DEBUG Already up to date. 2024-06-20 00:43:43,673 [ scc.git] DEBUG Calling 'git fetch origin pull/373/head' 2024-06-20 00:43:44,079 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-20 00:43:44,080 [ scc.git] DEBUG * branch refs/pull/373/head -> FETCH_HEAD 2024-06-20 00:43:44,086 [ scc.git] DEBUG Calling 'git fetch origin pull/375/head' 2024-06-20 00:43:44,474 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-20 00:43:44,475 [ scc.git] DEBUG * branch refs/pull/375/head -> FETCH_HEAD 2024-06-20 00:43:44,481 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:43:44,481 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:43:44,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:43:44,487 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-20 00:43:44,493 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:43:44,499 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 373 (Bump omero-test-infra from `7688c54` to `cda3ec6`) c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-20 00:43:44,504 [ scc.git] DEBUG Already up to date. 2024-06-20 00:43:44,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:43:44,659 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...90e6cc95443ce4747893ad9176814fa340f114e8' 2024-06-20 00:43:44,667 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:43:44,674 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 375 (Bump omero-figure from `3d9e3b8` to `ffc7e07`) 90e6cc95443ce4747893ad9176814fa340f114e8' 2024-06-20 00:43:44,681 [ scc.git] DEBUG Already up to date. 2024-06-20 00:43:45,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:43:45,111 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:43:45,170 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:43:45,170 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:43:45,177 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:43:45,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-06-20 00:43:45,545 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:43:45,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-20 00:43:45,545 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:43:45,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:43:45,553 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:43:45,559 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:43:45,560 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:43:45,566 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:43:45,573 [ scc.git] DEBUG Already up to date. 2024-06-20 00:43:45,573 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:43:45,574 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:43:45,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:43:45,585 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:43:45,629 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:43:45,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:43:45,634 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:45,672 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:43:45,679 [ scc.git] DEBUG has no local changes 2024-06-20 00:43:45,679 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:43:45,687 [ scc.git] DEBUG [detached HEAD 9c0b04f] merge master -Dorg -Ssuccess-only 2024-06-20 00:43:45,688 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:45,688 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:43:46,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-06-20 00:43:46,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-06-20 00:43:47,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-06-20 00:43:47,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-20 00:43:48,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:43:48,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-20 00:43:49,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-20 00:43:49,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:43:49,560 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-06-20 00:43:50,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-06-20 00:43:50,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-06-20 00:43:50,522 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:43:50,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-20 00:43:50,523 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:43:50,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:43:50,531 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:43:50,539 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:43:50,539 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:43:50,547 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:43:50,556 [ scc.git] DEBUG Already up to date. 2024-06-20 00:43:50,556 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-06-20 00:43:50,997 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-06-20 00:43:50,998 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-06-20 00:43:51,005 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:43:51,005 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:43:51,005 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:43:51,015 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-20 00:43:51,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:43:51,036 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-20 00:43:51,068 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:43:51,073 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-06-20 00:43:51,073 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-06-20 00:43:51,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:43:51,239 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:43:51,305 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:43:51,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:43:51,316 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:43:51,382 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:43:51,390 [ scc.git] DEBUG has no local changes 2024-06-20 00:43:51,390 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:43:51,404 [ scc.git] DEBUG [detached HEAD fdba6ad] merge master -Dorg -Ssuccess-only 2024-06-20 00:43:51,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:43:51,405 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:43:51,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-06-20 00:43:52,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None 2024-06-20 00:43:52,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None 2024-06-20 00:43:53,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-20 00:43:53,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:43:54,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-20 00:43:54,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:43:54,605 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-20 00:43:55,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None 2024-06-20 00:43:55,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-20 00:43:56,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:43:56,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-20 00:43:56,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:43:56,872 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency' 2024-06-20 00:43:57,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-06-20 00:43:57,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-06-20 00:43:58,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-06-20 00:43:58,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-06-20 00:43:59,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-20 00:43:59,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:44:00,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-20 00:44:00,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:44:00,496 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-06-20 00:44:00,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-06-20 00:44:01,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-06-20 00:44:01,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-06-20 00:44:02,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-06-20 00:44:02,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-06-20 00:44:02,779 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:44:02,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-20 00:44:02,780 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:02,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:02,788 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:44:02,794 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:44:02,795 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:44:02,801 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:44:02,808 [ scc.git] DEBUG Already up to date. 2024-06-20 00:44:02,808 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-06-20 00:44:03,285 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-20 00:44:03,285 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-06-20 00:44:03,291 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head' 2024-06-20 00:44:03,665 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-20 00:44:03,665 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD 2024-06-20 00:44:03,670 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-20 00:44:04,060 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-20 00:44:04,060 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-20 00:44:04,066 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:44:04,067 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:04,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:04,074 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-20 00:44:04,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:04,089 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-20 00:44:04,099 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:44:04,102 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-06-20 00:44:04,103 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-06-20 00:44:04,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:44:04,253 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-20 00:44:04,261 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:04,267 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-20 00:44:04,340 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-20 00:44:04,340 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:44:04,344 [ scc.git] DEBUG setup.py | 3 +-- 2024-06-20 00:44:04,344 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++------- 2024-06-20 00:44:04,344 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +----- 2024-06-20 00:44:04,344 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-) 2024-06-20 00:44:04,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:44:04,674 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-20 00:44:04,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:04,690 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-20 00:44:04,731 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-20 00:44:04,731 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py 2024-06-20 00:44:04,731 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:44:04,735 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++-- 2024-06-20 00:44:04,735 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++ 2024-06-20 00:44:04,735 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-) 2024-06-20 00:44:05,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:44:05,085 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:44:05,130 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:05,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:05,138 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:44:05,179 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:44:05,187 [ scc.git] DEBUG has no local changes 2024-06-20 00:44:05,188 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:44:05,198 [ scc.git] DEBUG [detached HEAD 688a7cf] merge master -Dorg -Ssuccess-only 2024-06-20 00:44:05,199 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:44:05,199 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:44:05,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-06-20 00:44:06,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-06-20 00:44:06,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-06-20 00:44:07,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-06-20 00:44:07,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-20 00:44:08,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:44:08,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-20 00:44:09,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-20 00:44:09,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-06-20 00:44:09,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-20 00:44:10,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-06-20 00:44:10,340 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-06-20 00:44:10,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-06-20 00:44:11,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-06-20 00:44:11,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-06-20 00:44:12,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-20 00:44:12,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:44:13,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-20 00:44:13,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:44:13,847 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-20 00:44:14,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-06-20 00:44:14,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-06-20 00:44:15,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-06-20 00:44:15,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-20 00:44:16,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:44:16,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-20 00:44:17,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:44:17,342 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-06-20 00:44:17,342 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:44:17,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-20 00:44:17,343 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:17,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:17,351 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:44:17,357 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:44:17,357 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:44:17,365 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:44:17,372 [ scc.git] DEBUG Already up to date. 2024-06-20 00:44:17,372 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-06-20 00:44:17,751 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-20 00:44:17,751 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-06-20 00:44:17,757 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-06-20 00:44:18,134 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-20 00:44:18,135 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-06-20 00:44:18,140 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-06-20 00:44:18,512 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-20 00:44:18,512 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-06-20 00:44:18,518 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:44:18,519 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:18,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:18,527 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-20 00:44:18,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:18,545 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-20 00:44:18,565 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-20 00:44:18,566 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-20 00:44:18,566 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-20 00:44:18,566 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-20 00:44:18,567 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-20 00:44:18,573 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-20 00:44:18,580 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-20 00:44:18,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:44:18,736 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-20 00:44:18,754 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-20 00:44:18,773 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#102](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-06-20 00:44:18,789 [ scc.config] DEBUG Found github.token 2024-06-20 00:44:18,789 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-06-20 00:44:18,789 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-20 00:44:18,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:18,808 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-20 00:44:18,829 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-06-20 00:44:18,829 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-06-20 00:44:18,829 [ scc.git] DEBUG Auto-merging setup.py 2024-06-20 00:44:18,829 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-20 00:44:18,830 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-20 00:44:18,830 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-20 00:44:18,830 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-06-20 00:44:18,830 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-20 00:44:18,831 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-20 00:44:18,841 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-20 00:44:18,852 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-20 00:44:19,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:44:19,148 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-20 00:44:19,156 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-20 00:44:19,177 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#102](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-06-20 00:44:19,186 [ scc.config] DEBUG Found github.token 2024-06-20 00:44:19,186 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-06-20 00:44:19,187 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-20 00:44:19,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:19,201 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-20 00:44:19,214 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-06-20 00:44:19,214 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-20 00:44:19,215 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:44:19,218 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-06-20 00:44:19,219 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-06-20 00:44:19,219 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-06-20 00:44:19,219 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-06-20 00:44:19,219 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-06-20 00:44:19,219 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-06-20 00:44:19,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:44:19,555 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:44:19,598 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:19,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:19,605 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:44:19,647 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:44:19,655 [ scc.git] DEBUG has no local changes 2024-06-20 00:44:19,655 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:44:19,665 [ scc.git] DEBUG [detached HEAD 4652705] merge master -Dorg -Ssuccess-only 2024-06-20 00:44:19,666 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:44:19,666 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:44:20,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-06-20 00:44:20,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-06-20 00:44:20,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-06-20 00:44:21,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-06-20 00:44:21,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:44:22,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-20 00:44:22,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-06-20 00:44:23,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:44:23,324 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-06-20 00:44:23,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-06-20 00:44:24,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-06-20 00:44:24,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-20 00:44:25,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:44:25,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-20 00:44:26,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-20 00:44:26,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:44:26,594 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-06-20 00:44:27,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-06-20 00:44:27,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-20 00:44:28,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:44:28,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-20 00:44:29,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-20 00:44:29,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:44:29,497 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-06-20 00:44:29,497 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:44:29,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-20 00:44:29,498 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:29,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:29,504 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:44:29,510 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:44:29,510 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:44:29,518 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:44:29,533 [ scc.git] DEBUG Updating ffc7e075..9ffbc8b7 2024-06-20 00:44:30,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/570 HTTP/1.1" 200 None 2024-06-20 00:44:30,170 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-06-20 00:44:30,605 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-20 00:44:30,606 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-06-20 00:44:30,612 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-06-20 00:44:31,030 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-20 00:44:31,031 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-06-20 00:44:31,037 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-06-20 00:44:31,429 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-20 00:44:31,430 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-06-20 00:44:31,436 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:44:31,436 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:31,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:31,444 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-20 00:44:31,454 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:31,461 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-20 00:44:31,606 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:44:31,615 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-06-20 00:44:31,615 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-06-20 00:44:31,615 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-06-20 00:44:31,615 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-06-20 00:44:31,615 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-06-20 00:44:31,615 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-06-20 00:44:31,615 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-06-20 00:44:31,615 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-06-20 00:44:31,615 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++ 2024-06-20 00:44:31,615 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-) 2024-06-20 00:44:31,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:44:31,766 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-20 00:44:31,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:31,784 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-20 00:44:31,937 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-06-20 00:44:31,938 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-06-20 00:44:31,938 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-06-20 00:44:31,939 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:44:31,948 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-06-20 00:44:31,948 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-06-20 00:44:31,948 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-06-20 00:44:31,948 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-06-20 00:44:31,948 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-06-20 00:44:31,948 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-06-20 00:44:31,948 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-06-20 00:44:31,948 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-06-20 00:44:31,948 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-06-20 00:44:31,948 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-06-20 00:44:31,948 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-06-20 00:44:31,948 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-06-20 00:44:32,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:44:32,164 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-06-20 00:44:32,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:32,180 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-06-20 00:44:32,229 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:44:32,233 [ scc.git] DEBUG setup.py | 2 +- 2024-06-20 00:44:32,233 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-20 00:44:32,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:44:32,579 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:44:32,623 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:32,623 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:32,630 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:44:32,672 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:44:32,682 [ scc.git] DEBUG has no local changes 2024-06-20 00:44:32,683 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating ffc7e075..9ffbc8b7 Previously merged: - PR 570 dependabot[bot] 'Bump braces from 3.0.2 to 3.0.3' Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:44:32,698 [ scc.git] DEBUG [detached HEAD 9cd07eb2] merge master -Dorg -Ssuccess-only 2024-06-20 00:44:32,699 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:44:32,699 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:44:33,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-06-20 00:44:33,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-06-20 00:44:34,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-06-20 00:44:34,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-20 00:44:34,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:44:35,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-20 00:44:35,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:44:35,874 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-06-20 00:44:35,874 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:44:35,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-20 00:44:35,874 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:35,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:35,882 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:44:35,888 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:44:35,889 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:44:35,897 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:44:35,904 [ scc.git] DEBUG Already up to date. 2024-06-20 00:44:35,904 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-06-20 00:44:36,282 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-06-20 00:44:36,282 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-06-20 00:44:36,287 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:44:36,287 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:36,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:36,293 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-20 00:44:36,300 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:36,305 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-20 00:44:36,315 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-06-20 00:44:36,315 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:44:36,318 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-06-20 00:44:36,318 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-06-20 00:44:36,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:44:36,465 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:44:36,507 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:36,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:36,513 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:44:36,555 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:44:36,563 [ scc.git] DEBUG has no local changes 2024-06-20 00:44:36,563 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:44:36,573 [ scc.git] DEBUG [detached HEAD 9d4e32b] merge master -Dorg -Ssuccess-only 2024-06-20 00:44:36,574 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:44:36,574 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:44:36,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-06-20 00:44:37,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-06-20 00:44:37,430 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-20 00:44:37,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-20 00:44:38,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:44:38,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-20 00:44:39,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-20 00:44:39,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:44:39,927 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-20 00:44:39,927 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:44:39,927 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-20 00:44:39,927 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:39,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:39,935 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:44:39,942 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:44:39,942 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:44:39,951 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:44:39,958 [ scc.git] DEBUG Already up to date. 2024-06-20 00:44:39,959 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-06-20 00:44:40,399 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-06-20 00:44:40,400 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-06-20 00:44:40,405 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:44:40,405 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:40,405 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:40,412 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-20 00:44:40,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:40,428 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-20 00:44:40,449 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:44:40,454 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-06-20 00:44:40,458 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-06-20 00:44:40,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:44:40,624 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:44:40,673 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:40,673 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:40,681 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:44:40,730 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:44:40,738 [ scc.git] DEBUG has no local changes 2024-06-20 00:44:40,739 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:44:40,751 [ scc.git] DEBUG [detached HEAD 10c4b30] merge master -Dorg -Ssuccess-only 2024-06-20 00:44:40,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:44:40,751 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:44:41,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-06-20 00:44:41,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-06-20 00:44:41,628 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-20 00:44:42,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-06-20 00:44:42,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:44:43,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-20 00:44:43,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-06-20 00:44:44,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:44:44,018 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-06-20 00:44:44,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-06-20 00:44:44,468 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-20 00:44:45,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-06-20 00:44:45,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:44:46,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-20 00:44:46,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-06-20 00:44:46,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:44:46,927 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-06-20 00:44:47,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-06-20 00:44:47,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-06-20 00:44:48,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-20 00:44:48,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:44:49,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-20 00:44:49,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-20 00:44:50,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:44:50,256 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-20 00:44:50,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-06-20 00:44:51,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-06-20 00:44:51,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-20 00:44:52,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:44:52,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-20 00:44:53,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-20 00:44:53,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:44:53,646 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-06-20 00:44:54,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-06-20 00:44:54,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-06-20 00:44:55,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-20 00:44:55,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:44:56,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-20 00:44:56,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:44:56,463 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-06-20 00:44:56,464 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:44:56,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-20 00:44:56,464 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:56,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:56,473 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:44:56,482 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:44:56,483 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:44:56,492 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:44:56,526 [ scc.git] DEBUG Updating 7b7a637..a8f380f 2024-06-20 00:44:57,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/476 HTTP/1.1" 200 None 2024-06-20 00:44:57,153 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-06-20 00:44:57,591 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-20 00:44:57,591 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-06-20 00:44:57,598 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-06-20 00:44:58,401 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-20 00:44:58,401 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-06-20 00:44:58,408 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-06-20 00:44:58,774 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-20 00:44:58,774 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-06-20 00:44:58,781 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-06-20 00:44:59,204 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-20 00:44:59,204 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-06-20 00:44:59,211 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-06-20 00:44:59,581 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-20 00:44:59,581 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-06-20 00:44:59,588 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:44:59,588 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:44:59,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:59,597 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-20 00:44:59,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:59,612 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-20 00:44:59,629 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-06-20 00:44:59,630 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:44:59,633 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-06-20 00:44:59,633 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-06-20 00:44:59,633 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-06-20 00:44:59,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:44:59,806 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-20 00:44:59,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:44:59,820 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-20 00:44:59,843 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-06-20 00:44:59,843 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-06-20 00:44:59,843 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-06-20 00:44:59,843 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-06-20 00:44:59,844 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:44:59,848 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-06-20 00:44:59,848 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-06-20 00:44:59,848 [ scc.git] DEBUG src/app/header.html | 5 + 2024-06-20 00:44:59,848 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-06-20 00:44:59,848 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-06-20 00:44:59,848 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-06-20 00:44:59,848 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-06-20 00:44:59,848 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-06-20 00:45:00,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:45:00,215 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-20 00:45:00,223 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:00,229 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-20 00:45:00,243 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-06-20 00:45:00,244 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:45:00,247 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-06-20 00:45:00,247 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-06-20 00:45:00,247 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-06-20 00:45:00,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:45:00,617 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-06-20 00:45:00,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:00,635 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-06-20 00:45:00,652 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:45:00,662 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-06-20 00:45:00,662 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-06-20 00:45:01,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:45:01,040 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-06-20 00:45:01,049 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:01,056 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-06-20 00:45:01,090 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-20 00:45:01,091 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:45:01,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:45:01,452 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:45:01,499 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:01,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:01,509 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:45:01,552 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:45:01,560 [ scc.git] DEBUG has no local changes 2024-06-20 00:45:01,560 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7b7a637..a8f380f Previously merged: - PR 476 dependabot[bot] 'Bump braces from 3.0.2 to 3.0.3' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:45:01,571 [ scc.git] DEBUG [detached HEAD a219adb] merge master -Dorg -Ssuccess-only 2024-06-20 00:45:01,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:45:01,572 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:45:01,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-06-20 00:45:02,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-06-20 00:45:02,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-06-20 00:45:03,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-20 00:45:04,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:45:04,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-20 00:45:04,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-20 00:45:05,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:45:05,408 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-06-20 00:45:05,408 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:45:05,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-20 00:45:05,409 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:05,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:05,416 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:45:05,424 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:45:05,424 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:45:05,432 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:45:05,440 [ scc.git] DEBUG Already up to date. 2024-06-20 00:45:05,441 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-06-20 00:45:05,814 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-06-20 00:45:05,814 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-06-20 00:45:05,819 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:45:05,819 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:05,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:05,827 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-20 00:45:05,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:05,842 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-20 00:45:05,856 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:45:05,859 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-06-20 00:45:05,859 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-06-20 00:45:05,859 [ scc.git] DEBUG requirements.txt | 2 +- 2024-06-20 00:45:05,859 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-06-20 00:45:05,862 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-06-20 00:45:05,863 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-06-20 00:45:06,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:45:06,017 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:45:06,067 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:06,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:06,075 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:45:06,127 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:45:06,141 [ scc.git] DEBUG has no local changes 2024-06-20 00:45:06,141 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:45:06,152 [ scc.git] DEBUG [detached HEAD a6026e6] merge master -Dorg -Ssuccess-only 2024-06-20 00:45:06,153 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:45:06,153 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:45:06,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-06-20 00:45:07,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-06-20 00:45:07,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-06-20 00:45:08,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-20 00:45:08,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:45:08,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-20 00:45:09,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:45:09,404 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-20 00:45:09,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-06-20 00:45:10,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-06-20 00:45:10,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-20 00:45:11,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:45:11,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-20 00:45:12,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:45:12,157 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-20 00:45:12,157 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:45:12,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-20 00:45:12,157 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:12,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:12,164 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:45:12,169 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:45:12,170 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:45:12,176 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:45:12,182 [ scc.git] DEBUG Already up to date. 2024-06-20 00:45:12,182 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-06-20 00:45:12,734 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-20 00:45:12,734 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-06-20 00:45:12,739 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-20 00:45:13,129 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-20 00:45:13,129 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-20 00:45:13,134 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:45:13,134 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:13,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:13,141 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-20 00:45:13,148 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:13,154 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-20 00:45:13,207 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-06-20 00:45:13,208 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-06-20 00:45:13,208 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-20 00:45:13,208 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-20 00:45:13,208 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-20 00:45:13,208 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-20 00:45:13,214 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-20 00:45:13,221 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-20 00:45:13,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:45:13,392 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-20 00:45:13,399 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-20 00:45:13,405 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#102](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-06-20 00:45:13,410 [ scc.config] DEBUG Found github.token 2024-06-20 00:45:13,411 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-06-20 00:45:13,411 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-20 00:45:13,417 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:13,423 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-20 00:45:13,440 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-20 00:45:13,440 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-20 00:45:13,440 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-06-20 00:45:13,441 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-20 00:45:13,441 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-20 00:45:13,447 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-20 00:45:13,456 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-20 00:45:13,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:45:13,794 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-20 00:45:13,802 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-20 00:45:13,810 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#102](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-06-20 00:45:13,817 [ scc.config] DEBUG Found github.token 2024-06-20 00:45:13,817 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-06-20 00:45:13,818 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:45:13,859 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:13,859 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:13,866 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:45:13,912 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:45:13,921 [ scc.git] DEBUG has no local changes 2024-06-20 00:45:13,921 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:45:13,943 [ scc.git] DEBUG [detached HEAD a9d9cda] merge master -Dorg -Ssuccess-only 2024-06-20 00:45:13,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:45:13,944 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:45:14,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-06-20 00:45:14,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-06-20 00:45:14,946 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-20 00:45:15,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-20 00:45:16,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:45:16,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-20 00:45:17,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-20 00:45:17,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:45:17,471 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-20 00:45:17,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-06-20 00:45:17,931 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-20 00:45:18,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-20 00:45:19,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:45:19,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-20 00:45:20,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-20 00:45:20,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:45:20,553 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-20 00:45:21,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-06-20 00:45:21,016 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-20 00:45:21,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-20 00:45:22,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:45:22,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-20 00:45:23,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-20 00:45:23,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:45:23,525 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-20 00:45:23,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-06-20 00:45:24,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-06-20 00:45:24,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-06-20 00:45:25,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-06-20 00:45:25,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-06-20 00:45:26,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-06-20 00:45:26,391 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:45:26,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-20 00:45:26,391 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:26,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:26,398 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:45:26,403 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:45:26,404 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:45:26,410 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:45:26,417 [ scc.git] DEBUG Already up to date. 2024-06-20 00:45:26,418 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-06-20 00:45:26,824 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-20 00:45:26,824 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-06-20 00:45:26,829 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-06-20 00:45:27,210 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-20 00:45:27,210 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-06-20 00:45:27,215 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-06-20 00:45:27,587 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-20 00:45:27,587 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-06-20 00:45:27,593 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:45:27,593 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:27,594 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:27,599 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-20 00:45:27,606 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:27,612 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-20 00:45:27,623 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:45:27,626 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-06-20 00:45:27,626 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-06-20 00:45:27,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:45:27,767 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-20 00:45:27,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:27,781 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-20 00:45:27,793 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-20 00:45:27,794 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:45:27,797 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-06-20 00:45:27,797 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-06-20 00:45:28,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:45:28,182 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-20 00:45:28,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:28,196 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-20 00:45:28,208 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-20 00:45:28,209 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:45:28,212 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-06-20 00:45:28,212 [ scc.git] DEBUG package.json | 2 +- 2024-06-20 00:45:28,212 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-06-20 00:45:28,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:45:28,598 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:45:28,642 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:28,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:28,650 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:45:28,697 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:45:28,707 [ scc.git] DEBUG has no local changes 2024-06-20 00:45:28,708 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:45:28,720 [ scc.git] DEBUG [detached HEAD d539b99] merge master -Dorg -Ssuccess-only 2024-06-20 00:45:28,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:45:28,721 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:45:29,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-06-20 00:45:29,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-06-20 00:45:30,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-20 00:45:30,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:45:30,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-20 00:45:31,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:45:31,373 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-06-20 00:45:31,373 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:45:31,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-20 00:45:31,373 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:31,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:31,384 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:45:31,395 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:45:31,395 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:45:31,405 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:45:31,417 [ scc.git] DEBUG Already up to date. 2024-06-20 00:45:31,418 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-20 00:45:31,800 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-06-20 00:45:31,800 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-20 00:45:31,807 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:45:31,807 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:31,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:31,816 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-20 00:45:31,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:31,834 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-20 00:45:31,849 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:45:32,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:45:32,023 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:45:32,066 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:32,066 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:32,074 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:45:32,115 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:45:32,122 [ scc.git] DEBUG has no local changes 2024-06-20 00:45:32,122 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:45:32,132 [ scc.git] DEBUG [detached HEAD 2f3897f] merge master -Dorg -Ssuccess-only 2024-06-20 00:45:32,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:45:32,132 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:45:32,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-06-20 00:45:32,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-06-20 00:45:33,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-06-20 00:45:33,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-06-20 00:45:34,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-20 00:45:34,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:45:35,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-20 00:45:35,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:45:35,803 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-20 00:45:35,803 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:45:35,803 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-20 00:45:35,803 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:35,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:35,814 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:45:35,825 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:45:35,825 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:45:35,837 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:45:35,848 [ scc.git] DEBUG Already up to date. 2024-06-20 00:45:35,849 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-06-20 00:45:36,236 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-06-20 00:45:36,236 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-06-20 00:45:36,243 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:45:36,244 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:36,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:36,253 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-20 00:45:36,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:36,271 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-20 00:45:36,285 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-06-20 00:45:36,286 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:45:36,288 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-06-20 00:45:36,288 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-06-20 00:45:36,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:45:36,457 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:45:36,503 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:36,503 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:36,511 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:45:36,556 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:45:36,563 [ scc.git] DEBUG has no local changes 2024-06-20 00:45:36,563 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:45:36,573 [ scc.git] DEBUG [detached HEAD d910665] merge master -Dorg -Ssuccess-only 2024-06-20 00:45:36,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:45:36,574 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:45:37,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-06-20 00:45:37,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-06-20 00:45:37,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-06-20 00:45:38,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-20 00:45:38,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:45:39,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-20 00:45:39,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:45:39,747 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-20 00:45:39,747 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:45:39,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-20 00:45:39,748 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:39,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:39,756 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:45:39,762 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:45:39,763 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:45:39,771 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:45:39,778 [ scc.git] DEBUG Already up to date. 2024-06-20 00:45:39,778 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-20 00:45:40,184 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-06-20 00:45:40,184 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-20 00:45:40,190 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:45:40,190 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:40,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:40,198 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-20 00:45:40,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:40,220 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-20 00:45:40,348 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-06-20 00:45:40,348 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-06-20 00:45:40,348 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-06-20 00:45:40,348 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-06-20 00:45:40,348 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-06-20 00:45:40,348 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-06-20 00:45:40,348 [ scc.git] DEBUG Auto-merging setup.py 2024-06-20 00:45:40,348 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-06-20 00:45:40,348 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-20 00:45:40,349 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-20 00:45:40,356 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-20 00:45:40,364 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-20 00:45:40,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:45:40,519 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-20 00:45:40,527 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-20 00:45:40,535 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#102](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/signup_settings.py - omero_signup/views.py - setup.py --conflicts 2024-06-20 00:45:40,542 [ scc.config] DEBUG Found github.token 2024-06-20 00:45:40,542 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-06-20 00:45:40,542 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:45:40,590 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:40,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:40,598 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:45:40,649 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:45:40,658 [ scc.git] DEBUG has no local changes 2024-06-20 00:45:40,659 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:45:40,670 [ scc.git] DEBUG [detached HEAD 8317abd] merge master -Dorg -Ssuccess-only 2024-06-20 00:45:40,671 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:45:40,671 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:45:41,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-06-20 00:45:41,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-06-20 00:45:41,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-06-20 00:45:42,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-20 00:45:42,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:45:43,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-20 00:45:43,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:45:43,788 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-20 00:45:43,788 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:45:43,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-20 00:45:43,788 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:43,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:43,795 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:45:43,804 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:45:43,804 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:45:43,814 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:45:43,825 [ scc.git] DEBUG Already up to date. 2024-06-20 00:45:43,825 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-06-20 00:45:44,250 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-06-20 00:45:44,250 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-06-20 00:45:44,256 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:45:44,257 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:44,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:44,265 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-06-20 00:45:44,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:44,282 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-06-20 00:45:44,301 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-20 00:45:44,305 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-06-20 00:45:44,305 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-06-20 00:45:44,305 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-06-20 00:45:44,305 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-06-20 00:45:44,305 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-06-20 00:45:44,305 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-06-20 00:45:44,307 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-06-20 00:45:44,308 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-06-20 00:45:44,308 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-06-20 00:45:44,308 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-06-20 00:45:44,308 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-06-20 00:45:44,308 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-06-20 00:45:44,308 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-06-20 00:45:44,308 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-06-20 00:45:44,308 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-06-20 00:45:44,308 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-06-20 00:45:44,308 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-06-20 00:45:44,308 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-06-20 00:45:44,308 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-06-20 00:45:44,308 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-06-20 00:45:44,308 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-06-20 00:45:44,308 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-06-20 00:45:44,308 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-06-20 00:45:44,308 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-06-20 00:45:44,308 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-06-20 00:45:44,308 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-06-20 00:45:44,308 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-06-20 00:45:44,308 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-06-20 00:45:44,308 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-06-20 00:45:44,308 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-06-20 00:45:44,309 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-06-20 00:45:44,309 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-06-20 00:45:44,309 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-06-20 00:45:44,309 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-06-20 00:45:44,309 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-06-20 00:45:44,309 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-06-20 00:45:44,309 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-06-20 00:45:44,309 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-06-20 00:45:44,309 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-06-20 00:45:44,309 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-06-20 00:45:44,309 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-06-20 00:45:44,309 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-06-20 00:45:44,309 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-06-20 00:45:44,309 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-06-20 00:45:44,309 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-06-20 00:45:44,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:45:44,458 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:45:44,513 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:44,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:44,522 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:45:44,568 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:45:44,577 [ scc.git] DEBUG has no local changes 2024-06-20 00:45:44,577 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:45:44,589 [ scc.git] DEBUG [detached HEAD 60f970e] merge master -Dorg -Ssuccess-only 2024-06-20 00:45:44,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:45:44,590 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:45:44,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-06-20 00:45:44,901 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:45:44,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-20 00:45:44,901 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:44,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:44,910 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:45:44,919 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:45:44,919 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:45:44,928 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:45:44,937 [ scc.git] DEBUG Already up to date. 2024-06-20 00:45:44,938 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:45:44,938 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:44,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:44,945 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:45:44,996 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:44,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:45,004 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:45:45,053 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:45:45,062 [ scc.git] DEBUG has no local changes 2024-06-20 00:45:45,062 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:45:45,073 [ scc.git] DEBUG [detached HEAD 882d23a] merge master -Dorg -Ssuccess-only 2024-06-20 00:45:45,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:45:45,074 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:45:45,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-06-20 00:45:45,339 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:45:45,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-20 00:45:45,339 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:45,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:45,347 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:45:45,353 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:45:45,353 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:45:45,358 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:45:45,364 [ scc.git] DEBUG Already up to date. 2024-06-20 00:45:45,364 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:45:45,364 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:45,364 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:45,370 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:45:45,418 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:45,418 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:45,424 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:45:45,472 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:45:45,480 [ scc.git] DEBUG has no local changes 2024-06-20 00:45:45,481 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:45:45,493 [ scc.git] DEBUG [detached HEAD ae8ba4c] merge master -Dorg -Ssuccess-only 2024-06-20 00:45:45,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:45:45,494 [ scc.git] INFO Overriding base-branch from master to main 2024-06-20 00:45:45,494 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:45:45,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-06-20 00:45:46,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-06-20 00:45:46,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-06-20 00:45:47,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-06-20 00:45:47,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-20 00:45:48,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:45:48,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-20 00:45:49,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-20 00:45:49,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:45:49,626 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-20 00:45:49,626 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:45:49,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-20 00:45:49,626 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:49,626 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:49,634 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-06-20 00:45:49,640 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:45:49,641 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-06-20 00:45:49,647 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-06-20 00:45:49,653 [ scc.git] DEBUG Already up to date. 2024-06-20 00:45:49,654 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-06-20 00:45:50,006 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-06-20 00:45:50,006 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-06-20 00:45:50,012 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:45:50,012 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:50,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:50,018 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-20 00:45:50,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:50,030 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-20 00:45:50,041 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-06-20 00:45:50,042 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-06-20 00:45:50,042 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-20 00:45:50,042 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-20 00:45:50,048 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-20 00:45:50,055 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-20 00:45:50,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:45:50,218 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-20 00:45:50,227 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-20 00:45:50,238 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#102](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-06-20 00:45:50,246 [ scc.config] DEBUG Found github.token 2024-06-20 00:45:50,246 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-06-20 00:45:50,246 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:45:50,295 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:50,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:50,304 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:45:50,350 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:45:50,358 [ scc.git] DEBUG has no local changes 2024-06-20 00:45:50,358 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:45:50,369 [ scc.git] DEBUG [detached HEAD 0aa505d] merge master -Dorg -Ssuccess-only 2024-06-20 00:45:50,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:45:50,370 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:45:50,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-06-20 00:45:50,649 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:45:50,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-20 00:45:50,649 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:50,649 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:50,656 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:45:50,662 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:45:50,662 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:45:50,668 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:45:50,675 [ scc.git] DEBUG Already up to date. 2024-06-20 00:45:50,675 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:45:50,675 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:50,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:50,681 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:45:50,723 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:50,723 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:50,729 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:45:50,772 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:45:50,779 [ scc.git] DEBUG has no local changes 2024-06-20 00:45:50,780 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:45:50,789 [ scc.git] DEBUG [detached HEAD 109496c] merge master -Dorg -Ssuccess-only 2024-06-20 00:45:50,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:45:50,790 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:45:51,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-06-20 00:45:51,083 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:45:51,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-20 00:45:51,083 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:51,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:51,090 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:45:51,096 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:45:51,096 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:45:51,102 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:45:51,109 [ scc.git] DEBUG Already up to date. 2024-06-20 00:45:51,110 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:45:51,110 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:51,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:51,116 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:45:51,161 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:51,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:51,167 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:45:51,209 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:45:51,232 [ scc.git] DEBUG has no local changes 2024-06-20 00:45:51,233 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:45:51,244 [ scc.git] DEBUG [detached HEAD f30aecd] merge master -Dorg -Ssuccess-only 2024-06-20 00:45:51,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:45:51,245 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:45:51,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-06-20 00:45:52,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-06-20 00:45:52,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-06-20 00:45:52,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-20 00:45:53,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:45:53,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-20 00:45:54,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:45:54,300 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-06-20 00:45:54,300 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:45:54,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-20 00:45:54,300 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:54,300 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:54,312 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-20 00:45:54,320 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:45:54,320 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-20 00:45:54,329 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-20 00:45:54,338 [ scc.git] DEBUG Already up to date. 2024-06-20 00:45:54,339 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-06-20 00:45:54,726 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-06-20 00:45:54,726 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-06-20 00:45:54,732 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:45:54,732 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:54,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:54,739 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-20 00:45:54,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:54,752 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-20 00:45:54,763 [ scc.git] DEBUG Auto-merging Dockerfile 2024-06-20 00:45:54,763 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-06-20 00:45:54,763 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-20 00:45:54,764 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-20 00:45:54,770 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-20 00:45:54,779 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-20 00:45:54,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:45:54,940 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-20 00:45:54,948 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-20 00:45:54,956 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#102](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-06-20 00:45:54,962 [ scc.config] DEBUG Found github.token 2024-06-20 00:45:54,962 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-06-20 00:45:54,962 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:45:55,008 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:45:55,008 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:45:55,015 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:45:55,063 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:45:55,072 [ scc.git] DEBUG has no local changes 2024-06-20 00:45:55,073 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:45:55,084 [ scc.git] DEBUG [detached HEAD a2c2c4c] merge master -Dorg -Ssuccess-only 2024-06-20 00:45:55,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:45:55,085 [ scc.git] INFO Overriding base-branch from master to develop 2024-06-20 00:45:55,085 [ scc.repo] DEBUG ## PRs found: 2024-06-20 00:45:55,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-06-20 00:45:56,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-06-20 00:45:56,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-06-20 00:45:57,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-06-20 00:45:57,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-06-20 00:45:57,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-06-20 00:45:58,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-06-20 00:45:58,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-20 00:45:59,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-20 00:45:59,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-20 00:46:00,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-06-20 00:46:00,249 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-20 00:46:00,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-06-20 00:46:01,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-06-20 00:46:01,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-06-20 00:46:02,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-06-20 00:46:02,208 [ scc.repo] DEBUG ## Branches found: 2024-06-20 00:46:02,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-20 00:46:02,209 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:46:02,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:46:02,218 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-06-20 00:46:02,226 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-20 00:46:02,227 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-06-20 00:46:02,237 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-06-20 00:46:02,247 [ scc.git] DEBUG Already up to date. 2024-06-20 00:46:02,248 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-06-20 00:46:02,658 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-06-20 00:46:02,658 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-06-20 00:46:02,663 [ scc.git] DEBUG ## Unique users: [] 2024-06-20 00:46:02,663 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:46:02,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:46:02,670 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-20 00:46:02,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:46:02,686 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-20 00:46:02,699 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-06-20 00:46:02,699 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-06-20 00:46:02,699 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-20 00:46:02,699 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-20 00:46:02,706 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a' 2024-06-20 00:46:02,714 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-06-20 00:46:02,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:02,876 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-20 00:46:02,885 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a' 2024-06-20 00:46:02,892 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#102](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-06-20 00:46:02,898 [ scc.config] DEBUG Found github.token 2024-06-20 00:46:02,898 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-06-20 00:46:02,899 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-20 00:46:02,943 [ scc.git] DEBUG Get sha1 of %s 2024-06-20 00:46:02,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-20 00:46:02,950 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:46:02,994 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:46:03,004 [ scc.git] DEBUG has no local changes 2024-06-20 00:46:03,004 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:46:03,016 [ scc.git] DEBUG [detached HEAD 8de90ee] merge master -Dorg -Ssuccess-only 2024-06-20 00:46:03,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:03,017 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-20 00:46:03,110 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-06-20 00:46:03,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:03,304 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-06-20 00:46:03,311 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-06-20 00:46:03,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:03,712 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-06-20 00:46:03,721 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-06-20 00:46:04,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:04,123 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-06-20 00:46:04,130 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-06-20 00:46:04,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:04,532 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-06-20 00:46:04,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:04,941 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-06-20 00:46:04,948 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-06-20 00:46:05,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:05,348 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-06-20 00:46:05,357 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-06-20 00:46:05,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:05,757 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-06-20 00:46:05,767 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-06-20 00:46:06,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:06,164 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-06-20 00:46:06,170 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-06-20 00:46:06,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:06,586 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-06-20 00:46:06,592 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-06-20 00:46:06,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:07,008 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-06-20 00:46:07,015 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-06-20 00:46:07,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:07,428 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-06-20 00:46:07,437 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-06-20 00:46:07,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:07,835 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-06-20 00:46:07,841 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-06-20 00:46:08,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:08,254 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-06-20 00:46:08,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:08,699 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-06-20 00:46:09,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:09,112 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-06-20 00:46:09,121 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-06-20 00:46:09,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:09,546 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-06-20 00:46:09,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:09,955 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-06-20 00:46:10,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:10,360 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-06-20 00:46:10,370 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-06-20 00:46:10,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:10,757 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-06-20 00:46:10,764 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-06-20 00:46:11,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:11,167 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-06-20 00:46:11,175 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-06-20 00:46:11,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:11,586 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-06-20 00:46:11,593 [ scc.config] DEBUG Found submodule.scripts.url 2024-06-20 00:46:11,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-20 00:46:11,993 [ scc.config] DEBUG Found submodule.scripts.branch 2024-06-20 00:46:11,994 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-20 00:46:12,096 [ scc.git] DEBUG has local changes 2024-06-20 00:46:12,096 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' - PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating ffc7e075..9ffbc8b7 Previously merged: - PR 570 dependabot[bot] 'Bump braces from 3.0.2 to 3.0.3' Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7b7a637..a8f380f Previously merged: - PR 476 dependabot[bot] 'Bump braces from 3.0.2 to 3.0.3' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#102 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/102/)' 2024-06-20 00:46:12,111 [ scc.git] DEBUG [detached HEAD 23f1fc5] merge master -Dorg -Ssuccess-only 2024-06-20 00:46:12,111 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-06-20 00:46:12,112 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-20 00:46:12,112 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,112 [ scc.merge] INFO 2024-06-20 00:46:12,112 [ scc.merge] INFO Merged PRs: 2024-06-20 00:46:12,112 [ scc.merge] INFO - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-20 00:46:12,112 [ scc.merge] INFO - PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`' 2024-06-20 00:46:12,112 [ scc.merge] INFO 2024-06-20 00:46:12,112 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-06-20 00:46:12,112 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,112 [ scc.merge] INFO 2024-06-20 00:46:12,112 [ scc.merge] INFO 2024-06-20 00:46:12,112 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-06-20 00:46:12,112 [ scc.merge] INFO Excluded PRs: 2024-06-20 00:46:12,112 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-06-20 00:46:12,112 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,112 [ scc.merge] INFO 2024-06-20 00:46:12,112 [ scc.merge] INFO Merged PRs: 2024-06-20 00:46:12,112 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-06-20 00:46:12,112 [ scc.merge] INFO 2024-06-20 00:46:12,112 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-06-20 00:46:12,112 [ scc.merge] INFO Excluded PRs: 2024-06-20 00:46:12,112 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-06-20 00:46:12,112 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-06-20 00:46:12,112 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-06-20 00:46:12,112 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-06-20 00:46:12,112 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,112 [ scc.merge] INFO 2024-06-20 00:46:12,112 [ scc.merge] INFO Merged PRs: 2024-06-20 00:46:12,112 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-06-20 00:46:12,112 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency' 2024-06-20 00:46:12,112 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-20 00:46:12,112 [ scc.merge] INFO 2024-06-20 00:46:12,113 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-06-20 00:46:12,113 [ scc.merge] INFO Excluded PRs: 2024-06-20 00:46:12,113 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-20 00:46:12,113 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-06-20 00:46:12,113 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,113 [ scc.merge] INFO 2024-06-20 00:46:12,113 [ scc.merge] INFO Merged PRs: 2024-06-20 00:46:12,113 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-06-20 00:46:12,113 [ scc.merge] INFO 2024-06-20 00:46:12,113 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-20 00:46:12,113 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-06-20 00:46:12,113 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-20 00:46:12,113 [ scc.merge] INFO 2024-06-20 00:46:12,113 [ scc.merge] INFO Repository: ome/omero-figure 2024-06-20 00:46:12,113 [ scc.merge] INFO Excluded PRs: 2024-06-20 00:46:12,113 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' (exclude comment) 2024-06-20 00:46:12,113 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-06-20 00:46:12,113 [ scc.merge] INFO Updating ffc7e075..9ffbc8b7 2024-06-20 00:46:12,113 [ scc.merge] INFO Previously merged: 2024-06-20 00:46:12,113 [ scc.merge] INFO - PR 570 dependabot[bot] 'Bump braces from 3.0.2 to 3.0.3' 2024-06-20 00:46:12,113 [ scc.merge] INFO 2024-06-20 00:46:12,113 [ scc.merge] INFO Merged PRs: 2024-06-20 00:46:12,113 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-06-20 00:46:12,113 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-06-20 00:46:12,113 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-06-20 00:46:12,113 [ scc.merge] INFO 2024-06-20 00:46:12,113 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-06-20 00:46:12,113 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,113 [ scc.merge] INFO 2024-06-20 00:46:12,113 [ scc.merge] INFO Merged PRs: 2024-06-20 00:46:12,114 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-06-20 00:46:12,114 [ scc.merge] INFO 2024-06-20 00:46:12,114 [ scc.merge] INFO Repository: ome/omero-gallery 2024-06-20 00:46:12,114 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,114 [ scc.merge] INFO 2024-06-20 00:46:12,114 [ scc.merge] INFO Merged PRs: 2024-06-20 00:46:12,114 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-20 00:46:12,114 [ scc.merge] INFO 2024-06-20 00:46:12,114 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-06-20 00:46:12,114 [ scc.merge] INFO Excluded PRs: 2024-06-20 00:46:12,114 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-06-20 00:46:12,114 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-06-20 00:46:12,114 [ scc.merge] INFO Updating 7b7a637..a8f380f 2024-06-20 00:46:12,114 [ scc.merge] INFO Previously merged: 2024-06-20 00:46:12,114 [ scc.merge] INFO - PR 476 dependabot[bot] 'Bump braces from 3.0.2 to 3.0.3' 2024-06-20 00:46:12,114 [ scc.merge] INFO 2024-06-20 00:46:12,114 [ scc.merge] INFO Merged PRs: 2024-06-20 00:46:12,114 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-06-20 00:46:12,114 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-06-20 00:46:12,114 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-20 00:46:12,114 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-06-20 00:46:12,115 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-06-20 00:46:12,115 [ scc.merge] INFO 2024-06-20 00:46:12,115 [ scc.merge] INFO Repository: ome/omero-mapr 2024-06-20 00:46:12,115 [ scc.merge] INFO Excluded PRs: 2024-06-20 00:46:12,115 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-06-20 00:46:12,115 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,115 [ scc.merge] INFO 2024-06-20 00:46:12,115 [ scc.merge] INFO Merged PRs: 2024-06-20 00:46:12,115 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-06-20 00:46:12,115 [ scc.merge] INFO 2024-06-20 00:46:12,115 [ scc.merge] INFO Repository: ome/omero-metadata 2024-06-20 00:46:12,115 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,115 [ scc.merge] INFO 2024-06-20 00:46:12,115 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-20 00:46:12,115 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-20 00:46:12,115 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-20 00:46:12,115 [ scc.merge] INFO 2024-06-20 00:46:12,115 [ scc.merge] INFO Repository: ome/omero-parade 2024-06-20 00:46:12,115 [ scc.merge] INFO Excluded PRs: 2024-06-20 00:46:12,115 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-06-20 00:46:12,115 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-06-20 00:46:12,115 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-06-20 00:46:12,116 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,116 [ scc.merge] INFO 2024-06-20 00:46:12,116 [ scc.merge] INFO Merged PRs: 2024-06-20 00:46:12,116 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-20 00:46:12,116 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-20 00:46:12,116 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-20 00:46:12,116 [ scc.merge] INFO 2024-06-20 00:46:12,116 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-06-20 00:46:12,116 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,116 [ scc.merge] INFO 2024-06-20 00:46:12,116 [ scc.merge] INFO Merged PRs: 2024-06-20 00:46:12,116 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-06-20 00:46:12,116 [ scc.merge] INFO 2024-06-20 00:46:12,116 [ scc.merge] INFO Repository: ome/omero-rois 2024-06-20 00:46:12,116 [ scc.merge] INFO Excluded PRs: 2024-06-20 00:46:12,116 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-20 00:46:12,116 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,116 [ scc.merge] INFO 2024-06-20 00:46:12,116 [ scc.merge] INFO Merged PRs: 2024-06-20 00:46:12,116 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-20 00:46:12,116 [ scc.merge] INFO 2024-06-20 00:46:12,116 [ scc.merge] INFO Repository: ome/omero-signup 2024-06-20 00:46:12,117 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,117 [ scc.merge] INFO 2024-06-20 00:46:12,117 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-20 00:46:12,117 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-20 00:46:12,117 [ scc.merge] INFO 2024-06-20 00:46:12,117 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-06-20 00:46:12,117 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,117 [ scc.merge] INFO 2024-06-20 00:46:12,117 [ scc.merge] INFO Merged PRs: 2024-06-20 00:46:12,117 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-20 00:46:12,117 [ scc.merge] INFO 2024-06-20 00:46:12,117 [ scc.merge] INFO Repository: ome/omero-upload 2024-06-20 00:46:12,117 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,117 [ scc.merge] INFO 2024-06-20 00:46:12,117 [ scc.merge] INFO 2024-06-20 00:46:12,117 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-06-20 00:46:12,117 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,117 [ scc.merge] INFO 2024-06-20 00:46:12,117 [ scc.merge] INFO 2024-06-20 00:46:12,117 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-06-20 00:46:12,117 [ scc.merge] INFO Excluded PRs: 2024-06-20 00:46:12,118 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-06-20 00:46:12,118 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,118 [ scc.merge] INFO 2024-06-20 00:46:12,118 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-20 00:46:12,118 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-20 00:46:12,118 [ scc.merge] INFO 2024-06-20 00:46:12,118 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-06-20 00:46:12,118 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,118 [ scc.merge] INFO 2024-06-20 00:46:12,118 [ scc.merge] INFO 2024-06-20 00:46:12,118 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-06-20 00:46:12,118 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,118 [ scc.merge] INFO 2024-06-20 00:46:12,118 [ scc.merge] INFO 2024-06-20 00:46:12,118 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-06-20 00:46:12,118 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,118 [ scc.merge] INFO 2024-06-20 00:46:12,118 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-20 00:46:12,118 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-06-20 00:46:12,118 [ scc.merge] INFO 2024-06-20 00:46:12,118 [ scc.merge] INFO Repository: ome/scripts 2024-06-20 00:46:12,118 [ scc.merge] INFO Excluded PRs: 2024-06-20 00:46:12,119 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-06-20 00:46:12,119 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-06-20 00:46:12,119 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-06-20 00:46:12,119 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-06-20 00:46:12,119 [ scc.merge] INFO Already up to date. 2024-06-20 00:46:12,119 [ scc.merge] INFO 2024-06-20 00:46:12,119 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-20 00:46:12,119 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-20 00:46:12,119 [ scc.merge] INFO 2024-06-20 00:46:12,119 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-20 00:46:12,119 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,128 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-20 00:46:12,128 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,136 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,136 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-20 00:46:12,136 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-20 00:46:12,145 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,153 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,154 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-20 00:46:12,154 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-20 00:46:12,162 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-20 00:46:12,170 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-20 00:46:12,179 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,188 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-20 00:46:12,188 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,196 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,196 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-20 00:46:12,196 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-20 00:46:12,205 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-20 00:46:12,213 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-20 00:46:12,220 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-20 00:46:12,230 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-20 00:46:12,238 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,247 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-20 00:46:12,248 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-20 00:46:12,256 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,266 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,266 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-20 00:46:12,266 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,272 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,272 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-20 00:46:12,272 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,278 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,278 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-20 00:46:12,278 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-20 00:46:12,285 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-20 00:46:12,292 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-20 00:46:12,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-20 00:46:12,298 [ scc.git] DEBUG Calling 'git remote' 2024-06-20 00:46:12,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 2e03a6a] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from ffc7e075 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7b7a637 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 5a90893 nothing to commit, working tree clean [detached HEAD 06fb5dd] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-20 00:47:00,148 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-20 00:47:09,105 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-20 00:47:11,485 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-20 00:47:16,101 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-20 00:48:03,846 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS