Started by upstream project "Trigger" build number 135
originally caused by:
Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-plugins-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
Commit message: "Merge pull request #17 from jburel/python3"
> git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision 3ae760e47042efe970407286ec1c6f5fd98f0bc3 (refs/remotes/origin/master)
Commit message: "Merge pull request #380 from ome/dependabot/submodules/omero-figure-6456608"
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-plugins.git
> git --version # timeout=10
> git --version # 'git version 2.39.3'
> git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 3ae760e47042efe970407286ec1c6f5fd98f0bc3 # timeout=10
> git rev-list --no-walk 3ae760e47042efe970407286ec1c6f5fd98f0bc3 # timeout=10
Cleaning workspace
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
> git submodule foreach --recursive git reset --hard # timeout=10
> git submodule foreach --recursive git clean -fdx # timeout=10
> git remote # timeout=10
> git submodule init # timeout=10
> git submodule sync # timeout=10
> git config --get remote.origin.url # timeout=10
> git submodule init # timeout=10
> git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
> git config --get submodule.omero-figure.url # timeout=10
> git config -f .gitmodules --get submodule.omero-figure.path # timeout=10
> git config --get submodule.minimal-omero-client.url # timeout=10
> git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10
> git config --get submodule.scripts.url # timeout=10
> git config -f .gitmodules --get submodule.scripts.path # timeout=10
> git config --get submodule.omero-test-infra.url # timeout=10
> git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10
> git config --get submodule.omero-prometheus-tools.url # timeout=10
> git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10
> git config --get submodule.omero-parade.url # timeout=10
> git config -f .gitmodules --get submodule.omero-parade.path # timeout=10
> git config --get submodule.omero-mapr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10
> git config --get submodule.omero-fpbioimage.url # timeout=10
> git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10
> git config --get submodule.omero-iviewer.url # timeout=10
> git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10
> git config --get submodule.omero-gallery.url # timeout=10
> git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10
> git config --get submodule.rOMERO-gateway.url # timeout=10
> git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10
> git config --get submodule.omero-weberror.url # timeout=10
> git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10
> git config --get submodule.omero-cli-render.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10
> git config --get submodule.omero-cli-duplicate.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10
> git config --get submodule.omero-metadata.url # timeout=10
> git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10
> git config --get submodule.omero-webtest.url # timeout=10
> git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10
> git config --get submodule.omero-upload.url # timeout=10
> git config -f .gitmodules --get submodule.omero-upload.path # timeout=10
> git config --get submodule.omero-virtual-microscope.url # timeout=10
> git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10
> git config --get submodule.omero-rois.url # timeout=10
> git config -f .gitmodules --get submodule.omero-rois.path # timeout=10
> git config --get submodule.omero-signup.url # timeout=10
> git config -f .gitmodules --get submodule.omero-signup.path # timeout=10
> git config --get submodule.omero-web-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10
> git config --get submodule.omero-cli-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10
> git submodule update --init --recursive omero-figure # timeout=10
> git submodule update --init --recursive minimal-omero-client # timeout=10
> git submodule update --init --recursive scripts # timeout=10
> git submodule update --init --recursive omero-test-infra # timeout=10
> git submodule update --init --recursive omero-prometheus-tools # timeout=10
> git submodule update --init --recursive omero-parade # timeout=10
> git submodule update --init --recursive omero-mapr # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 117
[Pipeline] sh
> git submodule update --init --recursive omero-fpbioimage # timeout=10
> git submodule update --init --recursive omero-iviewer # timeout=10
> git submodule update --init --recursive omero-gallery # timeout=10
> git submodule update --init --recursive rOMERO-gateway # timeout=10
> git submodule update --init --recursive omero-weberror # timeout=10
> git submodule update --init --recursive omero-cli-render # timeout=10
> git submodule update --init --recursive omero-cli-duplicate # timeout=10
> git submodule update --init --recursive omero-metadata # timeout=10
> git submodule update --init --recursive omero-webtest # timeout=10
> git submodule update --init --recursive omero-upload # timeout=10
> git submodule update --init --recursive omero-virtual-microscope # timeout=10
> git submodule update --init --recursive omero-rois # timeout=10
> git submodule update --init --recursive omero-signup # timeout=10
> git submodule update --init --recursive omero-web-zarr # timeout=10
> git submodule update --init --recursive omero-cli-zarr # timeout=10
+ pushd build
~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-plugins-push
+ python3 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ python3 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3)
Collecting pip
Using cached pip-24.1.2-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 21.2.3
Uninstalling pip-21.2.3:
Successfully uninstalled pip-21.2.3
Successfully installed pip-24.1.2
+ python3 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB)
Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
Collecting Deprecated (from PyGithub>=1.54->scc)
Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB)
Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc)
Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2024.7.4-py3-none-any.whl.metadata (2.2 kB)
Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB)
Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc)
Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB)
Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB)
Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached requests-2.32.3-py3-none-any.whl (64 kB)
Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB)
Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB)
Using cached certifi-2024.7.4-py3-none-any.whl (162 kB)
Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB)
Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB)
Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB)
Using cached idna-3.7-py3-none-any.whl (66 kB)
Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.7.4 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-plugins.git
+ BASE_REPO=omero-plugins.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-07-12 00:42:26,623 [ scc.config] DEBUG Found github.token
2024-07-12 00:42:26,626 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-07-12 00:42:26,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:42:27,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:42:27,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-07-12 00:42:27,674 [ scc.gh] DEBUG 3622 remaining from 5000 (Reset at 00:07
2024-07-12 00:42:27,675 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:42:27,682 [ scc.git] DEBUG Check current status
2024-07-12 00:42:27,683 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:42:27,688 [ scc.git] DEBUG 3ae760e Merge pull request #380 from ome/dependabot/submodules/omero-figure-6456608
2024-07-12 00:42:27,688 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:42:27,745 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD)
2024-07-12 00:42:27,749 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6)
2024-07-12 00:42:27,753 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42)
2024-07-12 00:42:27,756 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9)
2024-07-12 00:42:27,764 [ scc.git] DEBUG 64566080f813fb5d70a77c3cd1a141bf30eaddba omero-figure (v7.0.0-7-g64566080)
2024-07-12 00:42:27,767 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3)
2024-07-12 00:42:27,771 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435)
2024-07-12 00:42:27,775 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f)
2024-07-12 00:42:27,781 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15)
2024-07-12 00:42:27,785 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec)
2024-07-12 00:42:27,789 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2)
2024-07-12 00:42:27,792 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6)
2024-07-12 00:42:27,795 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5)
2024-07-12 00:42:27,799 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db)
2024-07-12 00:42:27,803 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2024-07-12 00:42:27,807 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c)
2024-07-12 00:42:27,812 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2024-07-12 00:42:27,815 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245)
2024-07-12 00:42:27,819 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132)
2024-07-12 00:42:27,823 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1)
2024-07-12 00:42:27,827 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2024-07-12 00:42:27,832 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273)
2024-07-12 00:42:27,839 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:42:28,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2024-07-12 00:42:28,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:42:29,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:42:29,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:42:29,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:42:29,910 [ scc.git] DEBUG Resetting...
2024-07-12 00:42:29,910 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-07-12 00:42:29,920 [ scc.git] DEBUG HEAD is now at 3ae760e Merge pull request #380 from ome/dependabot/submodules/omero-figure-6456608
2024-07-12 00:42:29,920 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-07-12 00:42:30,031 [ scc.git] DEBUG Check current status
2024-07-12 00:42:30,032 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:42:30,036 [ scc.git] DEBUG 3ae760e Merge pull request #380 from ome/dependabot/submodules/omero-figure-6456608
2024-07-12 00:42:30,037 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:42:30,098 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD)
2024-07-12 00:42:30,101 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6)
2024-07-12 00:42:30,105 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42)
2024-07-12 00:42:30,109 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9)
2024-07-12 00:42:30,117 [ scc.git] DEBUG 64566080f813fb5d70a77c3cd1a141bf30eaddba omero-figure (v7.0.0-7-g64566080)
2024-07-12 00:42:30,123 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3)
2024-07-12 00:42:30,128 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435)
2024-07-12 00:42:30,132 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f)
2024-07-12 00:42:30,136 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15)
2024-07-12 00:42:30,139 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec)
2024-07-12 00:42:30,142 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2)
2024-07-12 00:42:30,145 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6)
2024-07-12 00:42:30,148 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5)
2024-07-12 00:42:30,151 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db)
2024-07-12 00:42:30,155 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2024-07-12 00:42:30,158 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c)
2024-07-12 00:42:30,163 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2024-07-12 00:42:30,166 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245)
2024-07-12 00:42:30,170 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132)
2024-07-12 00:42:30,172 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1)
2024-07-12 00:42:30,176 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2024-07-12 00:42:30,180 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273)
2024-07-12 00:42:30,181 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-07-12 00:42:30,181 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-07-12 00:42:30,181 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-07-12 00:42:30,181 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-07-12 00:42:30,181 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-07-12 00:42:30,182 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:42:30,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2
2024-07-12 00:42:30,383 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:42:30,383 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:42:30,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:42:30,399 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:42:30,410 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:42:30,411 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:42:30,419 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:42:30,430 [ scc.git] DEBUG Already up to date.
2024-07-12 00:42:30,430 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:42:30,430 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:42:30,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:42:30,436 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:42:30,502 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:42:30,502 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:42:30,507 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:42:30,601 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f44fcca2af0> has no local changes
2024-07-12 00:42:30,601 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-plugins
Already up to date.
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:42:30,689 [ scc.git] DEBUG [detached HEAD c7b8dc3] merge master -Dorg -Snone
2024-07-12 00:42:30,689 [ scc.merge] INFO Repository: ome/omero-plugins
2024-07-12 00:42:30,689 [ scc.merge] INFO Already up to date.
2024-07-12 00:42:30,689 [ scc.merge] INFO
2024-07-12 00:42:30,689 [ scc.merge] INFO
2024-07-12 00:42:30,690 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-07-12 00:42:30,690 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'minimal-omero-client'
Synchronizing submodule url for 'omero-cli-duplicate'
Synchronizing submodule url for 'omero-cli-render'
Synchronizing submodule url for 'omero-cli-zarr'
Synchronizing submodule url for 'omero-figure'
Synchronizing submodule url for 'omero-fpbioimage'
Synchronizing submodule url for 'omero-gallery'
Synchronizing submodule url for 'omero-iviewer'
Synchronizing submodule url for 'omero-mapr'
Synchronizing submodule url for 'omero-metadata'
Synchronizing submodule url for 'omero-parade'
Synchronizing submodule url for 'omero-prometheus-tools'
Synchronizing submodule url for 'omero-rois'
Synchronizing submodule url for 'omero-signup'
Synchronizing submodule url for 'omero-test-infra'
Synchronizing submodule url for 'omero-upload'
Synchronizing submodule url for 'omero-virtual-microscope'
Synchronizing submodule url for 'omero-web-zarr'
Synchronizing submodule url for 'omero-weberror'
Synchronizing submodule url for 'omero-webtest'
Synchronizing submodule url for 'rOMERO-gateway'
Synchronizing submodule url for 'scripts'
From https://github.com/ome/omero-figure
64566080..fefe87cf master -> origin/master
Submodule path 'omero-figure': checked out 'fefe87cffc62034eb6bf0f596f2eea4937e9bd4e'
Merge all submodules using repository configuration:
base-branch: master
submodules:
scripts:
base-branch: develop
omero-web-zarr:
base-branch: main
2024-07-12 00:42:40,669 [ scc.config] DEBUG Found github.token
2024-07-12 00:42:40,673 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-07-12 00:42:40,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:42:41,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:42:41,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-07-12 00:42:41,693 [ scc.gh] DEBUG 3614 remaining from 5000 (Reset at 00:07
2024-07-12 00:42:41,694 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:42:41,699 [ scc.git] DEBUG Check current status
2024-07-12 00:42:41,700 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:42:41,705 [ scc.git] DEBUG c7b8dc3 merge master -Dorg -Snone
2024-07-12 00:42:41,705 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:42:41,765 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD)
2024-07-12 00:42:41,768 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6)
2024-07-12 00:42:41,772 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42)
2024-07-12 00:42:41,775 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9)
2024-07-12 00:42:41,783 [ scc.git] DEBUG +fefe87cffc62034eb6bf0f596f2eea4937e9bd4e omero-figure (v7.0.0-13-gfefe87cf)
2024-07-12 00:42:41,786 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3)
2024-07-12 00:42:41,790 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435)
2024-07-12 00:42:41,795 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f)
2024-07-12 00:42:41,799 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15)
2024-07-12 00:42:41,804 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec)
2024-07-12 00:42:41,808 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2)
2024-07-12 00:42:41,812 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6)
2024-07-12 00:42:41,816 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5)
2024-07-12 00:42:41,821 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db)
2024-07-12 00:42:41,826 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2024-07-12 00:42:41,831 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c)
2024-07-12 00:42:41,834 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2024-07-12 00:42:41,846 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245)
2024-07-12 00:42:41,857 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132)
2024-07-12 00:42:41,863 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1)
2024-07-12 00:42:41,871 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2024-07-12 00:42:41,876 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273)
2024-07-12 00:42:41,884 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:42:41,884 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-07-12 00:42:41,887 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-web-zarr:
base-branch: main
scripts:
base-branch: develop
2024-07-12 00:42:42,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2024-07-12 00:42:42,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:42:43,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:42:43,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:42:43,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:42:43,918 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:42:43,999 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-07-12 00:42:44,000 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:42:44,007 [ scc.git] DEBUG Check current status
2024-07-12 00:42:44,008 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:42:44,013 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1
2024-07-12 00:42:44,014 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:42:44,067 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:42:44,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None
2024-07-12 00:42:44,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:42:45,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:42:45,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:42:46,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:42:46,127 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:42:46,241 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:42:46,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-07-12 00:42:46,242 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:42:46,253 [ scc.git] DEBUG Check current status
2024-07-12 00:42:46,253 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:42:46,260 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest
2024-07-12 00:42:46,260 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:42:46,326 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:42:46,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None
2024-07-12 00:42:47,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:42:47,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:42:47,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:42:48,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:42:48,313 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:42:48,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:42:48,374 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-07-12 00:42:48,374 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:42:48,379 [ scc.git] DEBUG Check current status
2024-07-12 00:42:48,379 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:42:48,384 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest
2024-07-12 00:42:48,384 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:42:48,662 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:42:48,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None
2024-07-12 00:42:49,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:42:49,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:42:50,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:42:50,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:42:50,637 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:42:50,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:42:50,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-07-12 00:42:50,706 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:42:50,713 [ scc.git] DEBUG Check current status
2024-07-12 00:42:50,714 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:42:50,721 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config
2024-07-12 00:42:50,722 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:42:50,786 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:42:51,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None
2024-07-12 00:42:51,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:42:52,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:42:52,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:42:52,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:42:52,880 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:42:52,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:42:52,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-07-12 00:42:52,942 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:42:52,947 [ scc.git] DEBUG Check current status
2024-07-12 00:42:52,948 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:42:52,957 [ scc.git] DEBUG fefe87cf Merge pull request #575 from Tom-TBT/labelsort
2024-07-12 00:42:52,957 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:42:53,036 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:42:53,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None
2024-07-12 00:42:53,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:42:54,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:42:54,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:42:55,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:42:55,117 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:42:55,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:42:55,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-07-12 00:42:55,165 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:42:55,170 [ scc.git] DEBUG Check current status
2024-07-12 00:42:55,170 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:42:55,175 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0
2024-07-12 00:42:55,176 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:42:55,231 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:42:55,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None
2024-07-12 00:42:56,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:42:56,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:42:56,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:42:57,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:42:57,411 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:42:57,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:42:57,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-07-12 00:42:57,465 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:42:57,472 [ scc.git] DEBUG Check current status
2024-07-12 00:42:57,472 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:42:57,479 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0
2024-07-12 00:42:57,480 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:42:57,533 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:42:57,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None
2024-07-12 00:42:58,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:42:58,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:42:59,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:42:59,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:42:59,604 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:42:59,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:42:59,659 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-07-12 00:42:59,659 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:42:59,666 [ scc.git] DEBUG Check current status
2024-07-12 00:42:59,666 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:42:59,673 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3
2024-07-12 00:42:59,674 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:42:59,733 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:43:00,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None
2024-07-12 00:43:00,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:43:00,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:43:01,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:43:01,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:43:01,841 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:01,935 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:01,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-07-12 00:43:01,937 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:43:01,945 [ scc.git] DEBUG Check current status
2024-07-12 00:43:01,945 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:43:01,953 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master
2024-07-12 00:43:01,954 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:43:02,019 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:43:02,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None
2024-07-12 00:43:02,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:43:03,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:43:03,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:43:04,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:43:04,033 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:04,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:04,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-07-12 00:43:04,099 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:43:04,109 [ scc.git] DEBUG Check current status
2024-07-12 00:43:04,109 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:43:04,115 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging
2024-07-12 00:43:04,115 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:43:04,170 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:43:04,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None
2024-07-12 00:43:04,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:43:05,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:43:05,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:43:06,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:43:06,205 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:06,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:06,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-07-12 00:43:06,252 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:43:06,259 [ scc.git] DEBUG Check current status
2024-07-12 00:43:06,259 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:43:06,264 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0
2024-07-12 00:43:06,264 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:43:06,313 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:43:06,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None
2024-07-12 00:43:07,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:43:07,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:43:08,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:43:08,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:43:08,418 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:08,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:08,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-07-12 00:43:08,466 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:43:08,474 [ scc.git] DEBUG Check current status
2024-07-12 00:43:08,474 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:43:08,479 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4
2024-07-12 00:43:08,479 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:43:08,529 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:43:08,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None
2024-07-12 00:43:09,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:43:09,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:43:10,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:43:10,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:43:10,679 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:10,720 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:10,720 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-07-12 00:43:10,721 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:43:10,725 [ scc.git] DEBUG Check current status
2024-07-12 00:43:10,725 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:43:10,729 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config
2024-07-12 00:43:10,730 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:43:10,774 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:43:11,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None
2024-07-12 00:43:11,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:43:12,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:43:12,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:43:12,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:43:12,856 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:12,915 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:12,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-07-12 00:43:12,917 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:43:12,925 [ scc.git] DEBUG Check current status
2024-07-12 00:43:12,925 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:43:12,932 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0
2024-07-12 00:43:12,933 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:43:12,997 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:43:13,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None
2024-07-12 00:43:13,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:43:14,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:43:14,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:43:15,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:43:15,058 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:15,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:15,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-07-12 00:43:15,160 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:43:15,170 [ scc.git] DEBUG Check current status
2024-07-12 00:43:15,171 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:43:15,179 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support
2024-07-12 00:43:15,180 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:43:15,269 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:43:15,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-07-12 00:43:15,495 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-07-12 00:43:15,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None
2024-07-12 00:43:16,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:43:16,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:43:17,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:43:17,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:43:17,450 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:17,513 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:17,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-07-12 00:43:17,514 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:43:17,521 [ scc.git] DEBUG Check current status
2024-07-12 00:43:17,522 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:43:17,527 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest
2024-07-12 00:43:17,528 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:43:17,586 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:43:17,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None
2024-07-12 00:43:18,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:43:18,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:43:19,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:43:19,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:43:19,646 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:19,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:19,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-07-12 00:43:19,694 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:43:19,700 [ scc.git] DEBUG Check current status
2024-07-12 00:43:19,700 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:43:19,707 [ scc.git] DEBUG deab817 update setup-python to v4
2024-07-12 00:43:19,707 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:43:19,767 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:43:20,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None
2024-07-12 00:43:20,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:43:20,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:43:21,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:43:21,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:43:21,816 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:21,867 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:21,869 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-07-12 00:43:21,869 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:43:21,875 [ scc.git] DEBUG Check current status
2024-07-12 00:43:21,875 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:43:21,881 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-07-12 00:43:21,881 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:43:21,930 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:43:21,931 [ scc.git] DEBUG Repository configuration:
base-branch: main
2024-07-12 00:43:22,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None
2024-07-12 00:43:22,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:43:23,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:43:23,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:43:23,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:43:23,979 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:24,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:24,028 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-07-12 00:43:24,028 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:43:24,035 [ scc.git] DEBUG Check current status
2024-07-12 00:43:24,035 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:43:24,040 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0
2024-07-12 00:43:24,041 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:43:24,108 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:43:24,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-07-12 00:43:24,406 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-07-12 00:43:24,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None
2024-07-12 00:43:25,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:43:25,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:43:25,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:43:26,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:43:26,333 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:26,397 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:26,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-07-12 00:43:26,399 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:43:26,405 [ scc.git] DEBUG Check current status
2024-07-12 00:43:26,405 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:43:26,411 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0
2024-07-12 00:43:26,412 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:43:26,465 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:43:26,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-07-12 00:43:26,755 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-07-12 00:43:26,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None
2024-07-12 00:43:27,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:43:27,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:43:28,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:43:28,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:43:28,686 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:28,736 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:28,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-07-12 00:43:28,737 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:43:28,745 [ scc.git] DEBUG Check current status
2024-07-12 00:43:28,746 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:43:28,752 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-07-12 00:43:28,753 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:43:28,807 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:43:29,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None
2024-07-12 00:43:29,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:43:30,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:43:30,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:43:30,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:43:30,875 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:30,921 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:30,922 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-07-12 00:43:30,922 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-12 00:43:30,930 [ scc.git] DEBUG Check current status
2024-07-12 00:43:30,930 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:43:30,936 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking
2024-07-12 00:43:30,936 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:43:30,989 [ scc.config] DEBUG Found remote.origin.url
2024-07-12 00:43:30,989 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-07-12 00:43:31,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-07-12 00:43:31,305 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-07-12 00:43:31,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None
2024-07-12 00:43:31,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-12 00:43:32,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-12 00:43:32,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-12 00:43:33,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-12 00:43:33,204 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:33,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:33,249 [ scc.git] DEBUG Resetting...
2024-07-12 00:43:33,249 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-07-12 00:43:33,260 [ scc.git] DEBUG HEAD is now at c7b8dc3 merge master -Dorg -Snone
2024-07-12 00:43:33,261 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-07-12 00:43:33,340 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '64566080f813fb5d70a77c3cd1a141bf30eaddba'
2024-07-12 00:43:33,397 [ scc.git] DEBUG Check current status
2024-07-12 00:43:33,398 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-12 00:43:33,403 [ scc.git] DEBUG c7b8dc3 merge master -Dorg -Snone
2024-07-12 00:43:33,404 [ scc.git] DEBUG Calling 'git submodule status'
2024-07-12 00:43:33,459 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD)
2024-07-12 00:43:33,462 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6)
2024-07-12 00:43:33,464 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42)
2024-07-12 00:43:33,468 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9)
2024-07-12 00:43:33,476 [ scc.git] DEBUG 64566080f813fb5d70a77c3cd1a141bf30eaddba omero-figure (v7.0.0-7-g64566080)
2024-07-12 00:43:33,479 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3)
2024-07-12 00:43:33,482 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435)
2024-07-12 00:43:33,486 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f)
2024-07-12 00:43:33,490 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15)
2024-07-12 00:43:33,493 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec)
2024-07-12 00:43:33,496 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2)
2024-07-12 00:43:33,499 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6)
2024-07-12 00:43:33,503 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5)
2024-07-12 00:43:33,505 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db)
2024-07-12 00:43:33,509 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2024-07-12 00:43:33,511 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c)
2024-07-12 00:43:33,515 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2024-07-12 00:43:33,517 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245)
2024-07-12 00:43:33,520 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132)
2024-07-12 00:43:33,523 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1)
2024-07-12 00:43:33,526 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2024-07-12 00:43:33,530 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273)
2024-07-12 00:43:33,531 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-07-12 00:43:33,531 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-07-12 00:43:33,531 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-07-12 00:43:33,532 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-07-12 00:43:33,532 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-07-12 00:43:33,532 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-07-12 00:43:33,532 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:43:33,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2
2024-07-12 00:43:33,721 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:43:33,722 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:43:33,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:43:33,728 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:43:33,734 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:43:33,735 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:43:33,742 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:43:33,751 [ scc.git] DEBUG Already up to date.
2024-07-12 00:43:33,751 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:43:33,751 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:43:33,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:43:33,759 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:43:33,822 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:43:33,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:43:33,833 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:43:34,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2
2024-07-12 00:43:34,149 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:43:34,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-07-12 00:43:34,149 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:43:34,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:43:34,159 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:43:34,166 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:43:34,167 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:43:34,174 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:43:34,181 [ scc.git] DEBUG Already up to date.
2024-07-12 00:43:34,181 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:43:34,181 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:43:34,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:43:34,188 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:43:34,232 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:43:34,232 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:43:34,238 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:34,280 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:43:34,288 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b0d3ddf0> has no local changes
2024-07-12 00:43:34,288 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/minimal-omero-client
Already up to date.
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:43:34,299 [ scc.git] DEBUG [detached HEAD 16d6612] merge master -Dorg -Ssuccess-only
2024-07-12 00:43:34,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:34,300 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:43:34,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None
2024-07-12 00:43:35,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None
2024-07-12 00:43:35,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None
2024-07-12 00:43:36,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None
2024-07-12 00:43:36,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:43:37,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:43:37,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None
2024-07-12 00:43:38,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:43:38,068 [ scc.repo] DEBUG - PR 25 jburel 'review message'
2024-07-12 00:43:38,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None
2024-07-12 00:43:39,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None
2024-07-12 00:43:39,068 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:43:39,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-07-12 00:43:39,069 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:43:39,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:43:39,076 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:43:39,083 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:43:39,083 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:43:39,089 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:43:39,096 [ scc.git] DEBUG Already up to date.
2024-07-12 00:43:39,097 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head'
2024-07-12 00:43:39,506 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate
2024-07-12 00:43:39,507 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD
2024-07-12 00:43:39,514 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:43:39,514 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:43:39,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:43:39,522 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48'
2024-07-12 00:43:39,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:43:39,538 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48'
2024-07-12 00:43:39,552 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:43:39,555 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++----
2024-07-12 00:43:39,555 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-)
2024-07-12 00:43:39,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:43:39,711 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:43:39,757 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:43:39,757 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:43:39,766 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:39,817 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:43:39,829 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b04e9c70> has no local changes
2024-07-12 00:43:39,830 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 25 jburel 'review message'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:43:39,857 [ scc.git] DEBUG [detached HEAD fae81a8] merge master -Dorg -Ssuccess-only
2024-07-12 00:43:39,858 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:39,858 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:43:40,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None
2024-07-12 00:43:40,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None
2024-07-12 00:43:41,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None
2024-07-12 00:43:41,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None
2024-07-12 00:43:42,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:43:42,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None
2024-07-12 00:43:43,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:43:43,339 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition'
2024-07-12 00:43:43,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None
2024-07-12 00:43:44,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None
2024-07-12 00:43:44,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:43:45,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None
2024-07-12 00:43:45,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:43:45,669 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency'
2024-07-12 00:43:46,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None
2024-07-12 00:43:46,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None
2024-07-12 00:43:47,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None
2024-07-12 00:43:47,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None
2024-07-12 00:43:48,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None
2024-07-12 00:43:48,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:43:48,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None
2024-07-12 00:43:49,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:43:49,399 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate'
2024-07-12 00:43:49,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None
2024-07-12 00:43:50,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None
2024-07-12 00:43:50,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None
2024-07-12 00:43:51,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None
2024-07-12 00:43:51,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None
2024-07-12 00:43:51,736 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:43:51,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-07-12 00:43:51,737 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:43:51,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:43:51,744 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:43:51,751 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:43:51,751 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:43:51,762 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:43:51,770 [ scc.git] DEBUG Already up to date.
2024-07-12 00:43:51,770 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head'
2024-07-12 00:43:52,193 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2024-07-12 00:43:52,193 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD
2024-07-12 00:43:52,210 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head'
2024-07-12 00:43:52,985 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2024-07-12 00:43:52,986 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD
2024-07-12 00:43:52,991 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-07-12 00:43:53,364 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2024-07-12 00:43:53,365 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2024-07-12 00:43:53,374 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:43:53,374 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:43:53,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:43:53,382 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede'
2024-07-12 00:43:53,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:43:53,401 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede'
2024-07-12 00:43:53,419 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:43:53,422 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++-----------------
2024-07-12 00:43:53,422 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-)
2024-07-12 00:43:53,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:43:53,590 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae'
2024-07-12 00:43:53,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:43:53,607 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae'
2024-07-12 00:43:53,620 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2024-07-12 00:43:53,622 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:43:53,625 [ scc.git] DEBUG setup.py | 3 +--
2024-07-12 00:43:53,625 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++-------
2024-07-12 00:43:53,625 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +-----
2024-07-12 00:43:53,625 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-)
2024-07-12 00:43:53,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:43:54,000 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639'
2024-07-12 00:43:54,007 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:43:54,014 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639'
2024-07-12 00:43:54,028 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2024-07-12 00:43:54,029 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py
2024-07-12 00:43:54,029 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:43:54,033 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++--
2024-07-12 00:43:54,033 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++
2024-07-12 00:43:54,033 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-)
2024-07-12 00:43:54,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:43:54,405 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:43:54,462 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:43:54,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:43:54,469 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:43:54,520 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:43:54,529 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b0dc8550> has no local changes
2024-07-12 00:43:54,529 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-render
Excluded PRs:
- PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
- PR 54 dominikl 'Change rendering settings spec' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
- PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 63 sbesson 'Remove python-future dependency'
- PR 64 sbesson 'Fix thumbnail generation with missing rendering definition'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:43:54,542 [ scc.git] DEBUG [detached HEAD 71729f9] merge master -Dorg -Ssuccess-only
2024-07-12 00:43:54,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:43:54,542 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:43:54,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None
2024-07-12 00:43:55,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None
2024-07-12 00:43:55,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None
2024-07-12 00:43:56,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None
2024-07-12 00:43:56,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:43:57,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:43:57,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None
2024-07-12 00:43:58,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None
2024-07-12 00:43:58,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None
2024-07-12 00:43:59,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None
2024-07-12 00:43:59,210 [ scc.repo] DEBUG - PR 147 will-moore 'Name option'
2024-07-12 00:43:59,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None
2024-07-12 00:44:00,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None
2024-07-12 00:44:00,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None
2024-07-12 00:44:01,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None
2024-07-12 00:44:01,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:44:02,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None
2024-07-12 00:44:02,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:44:02,521 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID'
2024-07-12 00:44:03,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None
2024-07-12 00:44:03,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None
2024-07-12 00:44:04,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None
2024-07-12 00:44:04,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None
2024-07-12 00:44:04,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:44:05,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None
2024-07-12 00:44:05,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:44:05,919 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests'
2024-07-12 00:44:05,920 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:44:05,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-07-12 00:44:05,920 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:44:05,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:05,927 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:44:05,932 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:44:05,932 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:44:05,937 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:44:05,943 [ scc.git] DEBUG Already up to date.
2024-07-12 00:44:05,943 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head'
2024-07-12 00:44:06,350 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2024-07-12 00:44:06,350 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD
2024-07-12 00:44:06,357 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head'
2024-07-12 00:44:06,726 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2024-07-12 00:44:06,726 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD
2024-07-12 00:44:06,731 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head'
2024-07-12 00:44:07,063 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2024-07-12 00:44:07,063 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD
2024-07-12 00:44:07,070 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:44:07,071 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:44:07,071 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:07,080 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44'
2024-07-12 00:44:07,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:07,099 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44'
2024-07-12 00:44:07,116 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py
2024-07-12 00:44:07,116 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py
2024-07-12 00:44:07,116 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py
2024-07-12 00:44:07,116 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-12 00:44:07,116 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-12 00:44:07,125 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0'
2024-07-12 00:44:07,133 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config
2024-07-12 00:44:07,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:44:07,296 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44'
2024-07-12 00:44:07,306 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0'
2024-07-12 00:44:07,318 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests'
Conflicting PR. Removed from build [OMERO-plugins-push#120](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_zarr/raw_pixels.py
--conflicts
2024-07-12 00:44:07,325 [ scc.config] DEBUG Found github.token
2024-07-12 00:44:07,326 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts.
2024-07-12 00:44:07,326 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737'
2024-07-12 00:44:07,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:07,342 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737'
2024-07-12 00:44:07,357 [ scc.git] DEBUG Auto-merging .isort.cfg
2024-07-12 00:44:07,357 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg
2024-07-12 00:44:07,357 [ scc.git] DEBUG Auto-merging setup.py
2024-07-12 00:44:07,357 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py
2024-07-12 00:44:07,357 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py
2024-07-12 00:44:07,357 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py
2024-07-12 00:44:07,357 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py
2024-07-12 00:44:07,357 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-12 00:44:07,357 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-12 00:44:07,364 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0'
2024-07-12 00:44:07,373 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config
2024-07-12 00:44:07,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:44:07,707 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737'
2024-07-12 00:44:07,717 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0'
2024-07-12 00:44:07,725 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID'
Conflicting PR. Removed from build [OMERO-plugins-push#120](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/consoleText) for more details.
Possible conflicts:
- PR #102 will-moore 'Zarr export tests'
- src/omero_zarr/raw_pixels.py
- Upstream changes
- src/omero_zarr/raw_pixels.py
- .isort.cfg
--conflicts
2024-07-12 00:44:07,732 [ scc.config] DEBUG Found github.token
2024-07-12 00:44:07,732 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts.
2024-07-12 00:44:07,732 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef'
2024-07-12 00:44:07,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:07,747 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef'
2024-07-12 00:44:07,764 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2024-07-12 00:44:07,765 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py
2024-07-12 00:44:07,765 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:44:07,770 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------
2024-07-12 00:44:07,770 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++
2024-07-12 00:44:07,770 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++--
2024-07-12 00:44:07,770 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++-----
2024-07-12 00:44:07,770 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +-
2024-07-12 00:44:07,770 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-)
2024-07-12 00:44:08,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:44:08,114 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:44:08,158 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:44:08,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:08,165 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:44:08,205 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:44:08,215 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b04a04c0> has no local changes
2024-07-12 00:44:08,216 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
Already up to date.
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:44:08,228 [ scc.git] DEBUG [detached HEAD 2e15741] merge master -Dorg -Ssuccess-only
2024-07-12 00:44:08,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:44:08,229 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:44:08,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None
2024-07-12 00:44:09,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None
2024-07-12 00:44:09,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None
2024-07-12 00:44:10,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/576 HTTP/1.1" 200 None
2024-07-12 00:44:10,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/576/comments HTTP/1.1" 200 None
2024-07-12 00:44:10,493 [ scc.repo] DEBUG # ... Include label: include
2024-07-12 00:44:10,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f4b9c3912e5f22ce4ca023e06a5863f5c577598e HTTP/1.1" 200 None
2024-07-12 00:44:11,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f4b9c3912e5f22ce4ca023e06a5863f5c577598e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:44:11,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f4b9c3912e5f22ce4ca023e06a5863f5c577598e/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:44:12,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f4b9c3912e5f22ce4ca023e06a5863f5c577598e HTTP/1.1" 200 None
2024-07-12 00:44:12,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/f4b9c3912e5f22ce4ca023e06a5863f5c577598e?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:44:12,791 [ scc.repo] DEBUG - PR 576 Rdornier 'Color picker - popup update'
2024-07-12 00:44:13,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None
2024-07-12 00:44:13,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None
2024-07-12 00:44:14,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None
2024-07-12 00:44:14,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:44:15,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:44:15,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None
2024-07-12 00:44:16,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:44:16,023 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py'
2024-07-12 00:44:16,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560 HTTP/1.1" 200 None
2024-07-12 00:44:16,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560/comments HTTP/1.1" 200 None
2024-07-12 00:44:17,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c HTTP/1.1" 200 None
2024-07-12 00:44:18,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:44:18,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:44:18,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c HTTP/1.1" 200 None
2024-07-12 00:44:19,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:44:19,463 [ scc.repo] DEBUG - PR 560 will-moore 'Max projection bytes'
2024-07-12 00:44:19,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None
2024-07-12 00:44:20,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None
2024-07-12 00:44:20,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None
2024-07-12 00:44:21,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:44:21,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:44:22,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None
2024-07-12 00:44:22,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:44:22,855 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor'
2024-07-12 00:44:23,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None
2024-07-12 00:44:23,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549/comments HTTP/1.1" 200 None
2024-07-12 00:44:24,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77 HTTP/1.1" 200 None
2024-07-12 00:44:24,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:44:25,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:44:25,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77 HTTP/1.1" 200 None
2024-07-12 00:44:26,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/f7d26b972bfe9a7105c4f94776748446f2395c77?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:44:26,119 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature'
2024-07-12 00:44:26,120 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:44:26,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-07-12 00:44:26,120 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:44:26,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:26,128 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:44:26,135 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:44:26,136 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:44:26,144 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:44:26,162 [ scc.git] DEBUG Updating 64566080..fefe87cf
2024-07-12 00:44:26,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/575 HTTP/1.1" 200 None
2024-07-12 00:44:26,884 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head'
2024-07-12 00:44:27,242 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-07-12 00:44:27,242 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD
2024-07-12 00:44:27,249 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head'
2024-07-12 00:44:27,607 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-07-12 00:44:27,607 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD
2024-07-12 00:44:27,614 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head'
2024-07-12 00:44:28,312 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-07-12 00:44:28,312 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD
2024-07-12 00:44:28,315 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head'
2024-07-12 00:44:28,660 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-07-12 00:44:28,661 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD
2024-07-12 00:44:28,668 [ scc.git] DEBUG Calling 'git fetch origin pull/576/head'
2024-07-12 00:44:29,010 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-07-12 00:44:29,010 [ scc.git] DEBUG * branch refs/pull/576/head -> FETCH_HEAD
2024-07-12 00:44:29,016 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:44:29,017 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:44:29,017 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:29,023 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f7d26b972bfe9a7105c4f94776748446f2395c77'
2024-07-12 00:44:29,031 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:29,037 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) f7d26b972bfe9a7105c4f94776748446f2395c77'
2024-07-12 00:44:29,055 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js
2024-07-12 00:44:29,056 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:44:29,063 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++-
2024-07-12 00:44:29,063 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++
2024-07-12 00:44:29,063 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++
2024-07-12 00:44:29,063 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++-
2024-07-12 00:44:29,063 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 +
2024-07-12 00:44:29,063 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++-
2024-07-12 00:44:29,066 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++-
2024-07-12 00:44:29,066 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++
2024-07-12 00:44:29,066 [ scc.git] DEBUG src/templates/rois_form.template.html | 8 ++++
2024-07-12 00:44:29,066 [ scc.git] DEBUG 9 files changed, 271 insertions(+), 5 deletions(-)
2024-07-12 00:44:29,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:44:29,229 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab'
2024-07-12 00:44:29,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:29,244 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab'
2024-07-12 00:44:29,289 [ scc.git] DEBUG Auto-merging src/css/figure.css
2024-07-12 00:44:29,289 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js
2024-07-12 00:44:29,289 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js
2024-07-12 00:44:29,290 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js
2024-07-12 00:44:29,290 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:44:29,297 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +-
2024-07-12 00:44:29,297 [ scc.git] DEBUG src/css/figure.css | 4 +
2024-07-12 00:44:29,297 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes
2024-07-12 00:44:29,297 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +-
2024-07-12 00:44:29,297 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 +
2024-07-12 00:44:29,297 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++-
2024-07-12 00:44:29,297 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +-
2024-07-12 00:44:29,297 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 +
2024-07-12 00:44:29,297 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +-
2024-07-12 00:44:29,297 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 +
2024-07-12 00:44:29,297 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-)
2024-07-12 00:44:29,297 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png
2024-07-12 00:44:29,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:44:29,650 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c'
2024-07-12 00:44:29,659 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:29,666 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (Max projection bytes) 3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c'
2024-07-12 00:44:29,721 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2024-07-12 00:44:29,721 [ scc.git] DEBUG Auto-merging src/css/figure.css
2024-07-12 00:44:29,721 [ scc.git] DEBUG Auto-merging src/index.html
2024-07-12 00:44:29,721 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js
2024-07-12 00:44:29,721 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js
2024-07-12 00:44:29,721 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js
2024-07-12 00:44:29,722 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:44:29,730 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 24 +++++++--
2024-07-12 00:44:29,730 [ scc.git] DEBUG omero_figure/urls.py | 10 +++-
2024-07-12 00:44:29,730 [ scc.git] DEBUG omero_figure/views.py | 58 ++++++++++++++++++++++
2024-07-12 00:44:29,730 [ scc.git] DEBUG src/css/figure.css | 5 --
2024-07-12 00:44:29,730 [ scc.git] DEBUG src/index.html | 1 +
2024-07-12 00:44:29,730 [ scc.git] DEBUG src/js/models/figure_model.js | 29 ++++++++++-
2024-07-12 00:44:29,730 [ scc.git] DEBUG src/js/models/panel_model.js | 29 ++++++++++-
2024-07-12 00:44:29,730 [ scc.git] DEBUG src/js/views/info_panel_view.js | 3 +-
2024-07-12 00:44:29,730 [ scc.git] DEBUG src/js/views/modal_views.js | 2 +
2024-07-12 00:44:29,730 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +-
2024-07-12 00:44:29,730 [ scc.git] DEBUG src/js/views/right_panel_view.js | 5 ++
2024-07-12 00:44:29,731 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 3 +-
2024-07-12 00:44:29,731 [ scc.git] DEBUG src/templates/image_display_options.template.html | 4 +-
2024-07-12 00:44:29,731 [ scc.git] DEBUG src/templates/info_panel.template.html | 2 +
2024-07-12 00:44:29,731 [ scc.git] DEBUG 14 files changed, 162 insertions(+), 15 deletions(-)
2024-07-12 00:44:30,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:44:30,071 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6'
2024-07-12 00:44:30,092 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:30,114 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6'
2024-07-12 00:44:30,152 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:44:30,157 [ scc.git] DEBUG setup.py | 2 +-
2024-07-12 00:44:30,158 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-07-12 00:44:30,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:44:30,491 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f4b9c3912e5f22ce4ca023e06a5863f5c577598e'
2024-07-12 00:44:30,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:30,552 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 576 (Color picker - popup update) f4b9c3912e5f22ce4ca023e06a5863f5c577598e'
2024-07-12 00:44:30,584 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:44:30,590 [ scc.git] DEBUG src/js/views/colorpicker.js | 5 +++--
2024-07-12 00:44:30,590 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 2 deletions(-)
2024-07-12 00:44:30,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:44:30,895 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:44:30,946 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:44:30,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:30,953 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:44:31,006 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:44:31,018 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b044e430> has no local changes
2024-07-12 00:44:31,018 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-figure
Excluded PRs:
- PR 577 Rdornier 'Fill rois' (user: Rdornier)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 64566080..fefe87cf
Previously merged:
- PR 575 Tom-TBT 'Label sorting with drag and drop'
Merged PRs:
- PR 549 will-moore 'Inset feature'
- PR 555 will-moore 'Points in shape editor'
- PR 560 will-moore 'Max projection bytes'
- PR 568 will-moore 'Remove numpy from tests_require in setup.py'
- PR 576 Rdornier 'Color picker - popup update'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:44:31,032 [ scc.git] DEBUG [detached HEAD 47119a34] merge master -Dorg -Ssuccess-only
2024-07-12 00:44:31,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:44:31,033 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:44:31,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2024-07-12 00:44:31,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2024-07-12 00:44:32,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2024-07-12 00:44:32,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2024-07-12 00:44:33,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:44:33,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2024-07-12 00:44:34,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:44:34,179 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2024-07-12 00:44:34,179 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:44:34,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-07-12 00:44:34,179 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:44:34,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:34,185 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:44:34,191 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:44:34,191 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:44:34,197 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:44:34,204 [ scc.git] DEBUG Already up to date.
2024-07-12 00:44:34,204 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2024-07-12 00:44:34,570 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2024-07-12 00:44:34,570 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2024-07-12 00:44:34,577 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:44:34,577 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:44:34,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:34,584 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-07-12 00:44:34,592 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:34,600 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-07-12 00:44:34,610 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2024-07-12 00:44:34,611 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:44:34,614 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2024-07-12 00:44:34,614 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-07-12 00:44:34,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:44:34,791 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:44:34,838 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:44:34,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:34,844 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:44:34,932 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:44:34,955 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b04ebf40> has no local changes
2024-07-12 00:44:34,956 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:44:34,968 [ scc.git] DEBUG [detached HEAD fcba70b] merge master -Dorg -Ssuccess-only
2024-07-12 00:44:34,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:44:34,969 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:44:35,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2024-07-12 00:44:35,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None
2024-07-12 00:44:35,756 [ scc.repo] DEBUG # ... Include label: dependencies
2024-07-12 00:44:36,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None
2024-07-12 00:44:36,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:44:37,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:44:37,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None
2024-07-12 00:44:38,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:44:38,259 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
2024-07-12 00:44:38,259 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:44:38,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-07-12 00:44:38,260 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:44:38,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:38,277 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:44:38,283 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:44:38,284 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:44:38,293 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:44:38,300 [ scc.git] DEBUG Already up to date.
2024-07-12 00:44:38,301 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head'
2024-07-12 00:44:38,693 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-07-12 00:44:38,694 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD
2024-07-12 00:44:38,705 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:44:38,706 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:44:38,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:38,713 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893'
2024-07-12 00:44:38,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:38,727 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893'
2024-07-12 00:44:38,741 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:44:38,746 [ scc.git] DEBUG package-lock.json | 18 ++++++------------
2024-07-12 00:44:38,746 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-)
2024-07-12 00:44:38,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:44:38,916 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:44:38,963 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:44:38,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:38,970 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:44:39,011 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:44:39,019 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b045cfa0> has no local changes
2024-07-12 00:44:39,019 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:44:39,028 [ scc.git] DEBUG [detached HEAD 857472c] merge master -Dorg -Ssuccess-only
2024-07-12 00:44:39,028 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:44:39,028 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:44:39,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2024-07-12 00:44:39,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None
2024-07-12 00:44:39,922 [ scc.repo] DEBUG # ... Include label: dependencies
2024-07-12 00:44:40,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None
2024-07-12 00:44:40,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:44:41,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:44:41,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None
2024-07-12 00:44:42,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:44:42,386 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5'
2024-07-12 00:44:42,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None
2024-07-12 00:44:42,847 [ scc.repo] DEBUG # ... Include label: dependencies
2024-07-12 00:44:43,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None
2024-07-12 00:44:43,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:44:44,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:44:44,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None
2024-07-12 00:44:45,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:44:45,415 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io'
2024-07-12 00:44:45,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2024-07-12 00:44:46,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2024-07-12 00:44:46,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-07-12 00:44:47,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:44:47,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:44:48,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-07-12 00:44:48,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:44:48,715 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2024-07-12 00:44:49,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2024-07-12 00:44:49,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2024-07-12 00:44:50,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-07-12 00:44:50,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:44:51,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:44:51,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-07-12 00:44:52,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:44:52,185 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2024-07-12 00:44:52,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2024-07-12 00:44:53,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2024-07-12 00:44:53,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-07-12 00:44:54,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:44:54,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-07-12 00:44:55,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:44:55,067 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2024-07-12 00:44:55,067 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:44:55,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-07-12 00:44:55,068 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:44:55,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:55,074 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:44:55,079 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:44:55,080 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:44:55,085 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:44:55,090 [ scc.git] DEBUG Already up to date.
2024-07-12 00:44:55,090 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2024-07-12 00:44:55,434 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-07-12 00:44:55,435 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2024-07-12 00:44:55,439 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2024-07-12 00:44:55,810 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-07-12 00:44:55,810 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2024-07-12 00:44:55,815 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2024-07-12 00:44:56,151 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-07-12 00:44:56,151 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2024-07-12 00:44:56,156 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head'
2024-07-12 00:44:56,514 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-07-12 00:44:56,514 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD
2024-07-12 00:44:56,519 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head'
2024-07-12 00:44:56,856 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-07-12 00:44:56,856 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD
2024-07-12 00:44:56,861 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:44:56,861 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:44:56,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:56,867 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-07-12 00:44:56,875 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:56,882 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-07-12 00:44:56,896 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2024-07-12 00:44:56,897 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:44:56,900 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2024-07-12 00:44:56,901 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2024-07-12 00:44:56,901 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2024-07-12 00:44:57,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:44:57,067 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2024-07-12 00:44:57,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:57,081 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2024-07-12 00:44:57,102 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2024-07-12 00:44:57,103 [ scc.git] DEBUG Auto-merging src/app/context.js
2024-07-12 00:44:57,103 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2024-07-12 00:44:57,103 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2024-07-12 00:44:57,103 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:44:57,108 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2024-07-12 00:44:57,108 [ scc.git] DEBUG src/app/context.js | 6 +-
2024-07-12 00:44:57,108 [ scc.git] DEBUG src/app/header.html | 5 +
2024-07-12 00:44:57,108 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2024-07-12 00:44:57,108 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2024-07-12 00:44:57,108 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2024-07-12 00:44:57,108 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2024-07-12 00:44:57,108 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2024-07-12 00:44:57,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:44:57,478 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2024-07-12 00:44:57,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:57,492 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2024-07-12 00:44:57,509 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2024-07-12 00:44:57,510 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:44:57,514 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2024-07-12 00:44:57,514 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2024-07-12 00:44:57,514 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2024-07-12 00:44:57,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:44:57,891 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5'
2024-07-12 00:44:57,900 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:57,906 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5'
2024-07-12 00:44:57,925 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:44:57,934 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++--------------------
2024-07-12 00:44:57,934 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-)
2024-07-12 00:44:58,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:44:58,313 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11'
2024-07-12 00:44:58,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:58,328 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11'
2024-07-12 00:44:58,368 [ scc.git] DEBUG Auto-merging package-lock.json
2024-07-12 00:44:58,370 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:44:58,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:44:58,726 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:44:58,769 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:44:58,769 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:44:58,776 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:44:58,830 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:44:58,849 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b04dbdf0> has no local changes
2024-07-12 00:44:58,850 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 477 dependabot[bot] 'Bump ws and socket.io'
- PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:44:58,890 [ scc.git] DEBUG [detached HEAD 3dfe923] merge master -Dorg -Ssuccess-only
2024-07-12 00:44:58,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:44:58,892 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:44:59,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2024-07-12 00:44:59,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2024-07-12 00:45:00,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2024-07-12 00:45:00,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-07-12 00:45:01,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:45:01,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:45:02,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-07-12 00:45:02,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:45:02,751 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2024-07-12 00:45:02,751 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:45:02,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-07-12 00:45:02,751 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:02,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:02,758 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:45:02,763 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:45:02,764 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:45:02,769 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:45:02,775 [ scc.git] DEBUG Already up to date.
2024-07-12 00:45:02,775 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2024-07-12 00:45:03,150 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-07-12 00:45:03,151 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2024-07-12 00:45:03,155 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:45:03,156 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:03,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:03,161 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-07-12 00:45:03,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:03,174 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-07-12 00:45:03,185 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:45:03,188 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2024-07-12 00:45:03,188 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2024-07-12 00:45:03,188 [ scc.git] DEBUG requirements.txt | 2 +-
2024-07-12 00:45:03,188 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2024-07-12 00:45:03,188 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2024-07-12 00:45:03,188 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2024-07-12 00:45:03,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:45:03,395 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:45:03,459 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:03,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:03,467 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:45:03,512 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:45:03,520 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b0414610> has no local changes
2024-07-12 00:45:03,520 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:45:03,530 [ scc.git] DEBUG [detached HEAD 2477c75] merge master -Dorg -Ssuccess-only
2024-07-12 00:45:03,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:45:03,531 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:45:03,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2024-07-12 00:45:04,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2024-07-12 00:45:04,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2024-07-12 00:45:05,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-07-12 00:45:05,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:45:06,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-07-12 00:45:07,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:45:07,025 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-07-12 00:45:07,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2024-07-12 00:45:07,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2024-07-12 00:45:08,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-07-12 00:45:08,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:45:09,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-07-12 00:45:09,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:45:09,892 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-07-12 00:45:09,893 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:45:09,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-07-12 00:45:09,893 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:09,893 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:09,901 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:45:09,908 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:45:09,908 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:45:09,915 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:45:09,922 [ scc.git] DEBUG Already up to date.
2024-07-12 00:45:09,923 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2024-07-12 00:45:10,304 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-07-12 00:45:10,304 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2024-07-12 00:45:10,310 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-07-12 00:45:10,702 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-07-12 00:45:10,702 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2024-07-12 00:45:10,707 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:45:10,707 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:10,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:10,713 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-07-12 00:45:10,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:10,728 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-07-12 00:45:10,744 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2024-07-12 00:45:10,744 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2024-07-12 00:45:10,744 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-07-12 00:45:10,744 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-07-12 00:45:10,745 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-12 00:45:10,746 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-12 00:45:10,752 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-07-12 00:45:10,760 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging
2024-07-12 00:45:10,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:45:10,939 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-07-12 00:45:10,948 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-07-12 00:45:10,955 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#120](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2024-07-12 00:45:10,962 [ scc.config] DEBUG Found github.token
2024-07-12 00:45:10,962 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2024-07-12 00:45:10,962 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2024-07-12 00:45:10,970 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:10,977 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2024-07-12 00:45:10,995 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-07-12 00:45:10,996 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-07-12 00:45:10,996 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2024-07-12 00:45:10,996 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-12 00:45:10,996 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-12 00:45:11,004 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-07-12 00:45:11,015 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging
2024-07-12 00:45:11,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:45:11,349 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7'
2024-07-12 00:45:11,357 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-07-12 00:45:11,364 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#120](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2024-07-12 00:45:11,371 [ scc.config] DEBUG Found github.token
2024-07-12 00:45:11,372 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2024-07-12 00:45:11,372 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:45:11,418 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:11,418 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:11,427 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:45:11,473 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:45:11,486 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b04148b0> has no local changes
2024-07-12 00:45:11,486 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Already up to date.
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:45:11,497 [ scc.git] DEBUG [detached HEAD 8eb2efc] merge master -Dorg -Ssuccess-only
2024-07-12 00:45:11,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:45:11,498 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:45:12,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2024-07-12 00:45:12,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None
2024-07-12 00:45:12,535 [ scc.repo] DEBUG # ... Include label: dependencies
2024-07-12 00:45:13,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None
2024-07-12 00:45:13,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:45:14,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:45:14,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None
2024-07-12 00:45:15,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:45:15,191 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-07-12 00:45:15,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None
2024-07-12 00:45:15,644 [ scc.repo] DEBUG # ... Include label: dependencies
2024-07-12 00:45:16,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None
2024-07-12 00:45:16,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:45:17,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:45:17,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None
2024-07-12 00:45:18,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:45:18,099 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-07-12 00:45:18,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None
2024-07-12 00:45:18,581 [ scc.repo] DEBUG # ... Include label: dependencies
2024-07-12 00:45:19,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None
2024-07-12 00:45:19,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:45:20,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:45:20,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None
2024-07-12 00:45:21,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:45:21,145 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-07-12 00:45:21,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2024-07-12 00:45:22,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2024-07-12 00:45:22,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2024-07-12 00:45:22,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2024-07-12 00:45:23,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2024-07-12 00:45:23,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2024-07-12 00:45:23,951 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:45:23,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-07-12 00:45:23,951 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:23,951 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:23,959 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:45:23,965 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:45:23,965 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:45:23,972 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:45:23,979 [ scc.git] DEBUG Already up to date.
2024-07-12 00:45:23,979 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head'
2024-07-12 00:45:24,372 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-07-12 00:45:24,372 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD
2024-07-12 00:45:24,377 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head'
2024-07-12 00:45:24,711 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-07-12 00:45:24,711 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD
2024-07-12 00:45:24,715 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head'
2024-07-12 00:45:25,119 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-07-12 00:45:25,120 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD
2024-07-12 00:45:25,126 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:45:25,126 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:25,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:25,133 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680'
2024-07-12 00:45:25,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:25,147 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680'
2024-07-12 00:45:25,160 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:45:25,163 [ scc.git] DEBUG package-lock.json | 12 ++++++++----
2024-07-12 00:45:25,163 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-)
2024-07-12 00:45:25,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:45:25,311 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec'
2024-07-12 00:45:25,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:25,327 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec'
2024-07-12 00:45:25,348 [ scc.git] DEBUG Auto-merging package-lock.json
2024-07-12 00:45:25,348 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:45:25,351 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++---------------------------
2024-07-12 00:45:25,351 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-)
2024-07-12 00:45:25,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:45:25,784 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f'
2024-07-12 00:45:25,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:25,799 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f'
2024-07-12 00:45:25,813 [ scc.git] DEBUG Auto-merging package-lock.json
2024-07-12 00:45:25,814 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:45:25,817 [ scc.git] DEBUG package-lock.json | 8 ++++----
2024-07-12 00:45:25,817 [ scc.git] DEBUG package.json | 2 +-
2024-07-12 00:45:25,817 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-)
2024-07-12 00:45:26,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:45:26,201 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:45:26,245 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:26,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:26,251 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:45:26,295 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:45:26,302 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b0414670> has no local changes
2024-07-12 00:45:26,303 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:45:26,312 [ scc.git] DEBUG [detached HEAD e587d94] merge master -Dorg -Ssuccess-only
2024-07-12 00:45:26,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:45:26,313 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:45:26,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2024-07-12 00:45:27,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None
2024-07-12 00:45:27,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-07-12 00:45:28,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:45:28,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-07-12 00:45:29,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:45:29,155 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel'
2024-07-12 00:45:29,155 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:45:29,156 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-07-12 00:45:29,156 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:29,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:29,165 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:45:29,172 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:45:29,172 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:45:29,179 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:45:29,186 [ scc.git] DEBUG Already up to date.
2024-07-12 00:45:29,186 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-07-12 00:45:29,588 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2024-07-12 00:45:29,588 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-07-12 00:45:29,595 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:45:29,595 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:29,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:29,603 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-07-12 00:45:29,611 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:29,618 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-07-12 00:45:29,628 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:45:29,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:45:29,797 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:45:29,846 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:29,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:29,854 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:45:29,897 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:45:29,904 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b04cbee0> has no local changes
2024-07-12 00:45:29,904 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:45:29,914 [ scc.git] DEBUG [detached HEAD 9e7841c] merge master -Dorg -Ssuccess-only
2024-07-12 00:45:29,915 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:45:29,915 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:45:30,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2024-07-12 00:45:30,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None
2024-07-12 00:45:31,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None
2024-07-12 00:45:31,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None
2024-07-12 00:45:32,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-07-12 00:45:32,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:45:33,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-07-12 00:45:33,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:45:33,709 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-07-12 00:45:33,709 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:45:33,709 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-07-12 00:45:33,709 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:33,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:33,721 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:45:33,732 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:45:33,733 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:45:33,744 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:45:33,752 [ scc.git] DEBUG Already up to date.
2024-07-12 00:45:33,752 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head'
2024-07-12 00:45:34,117 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-07-12 00:45:34,118 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD
2024-07-12 00:45:34,127 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:45:34,128 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:34,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:34,140 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61'
2024-07-12 00:45:34,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:34,166 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61'
2024-07-12 00:45:34,182 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py
2024-07-12 00:45:34,183 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:45:34,187 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++
2024-07-12 00:45:34,187 [ scc.git] DEBUG 1 file changed, 33 insertions(+)
2024-07-12 00:45:34,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:45:34,360 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:45:34,419 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:34,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:34,428 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:45:34,487 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:45:34,498 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b0425b80> has no local changes
2024-07-12 00:45:34,499 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:45:34,513 [ scc.git] DEBUG [detached HEAD 85a010a] merge master -Dorg -Ssuccess-only
2024-07-12 00:45:34,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:45:34,514 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:45:34,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2024-07-12 00:45:35,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2024-07-12 00:45:35,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2024-07-12 00:45:36,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-07-12 00:45:36,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:45:37,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-07-12 00:45:37,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:45:37,678 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2024-07-12 00:45:37,678 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:45:37,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-07-12 00:45:37,678 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:37,678 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:37,685 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:45:37,692 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:45:37,692 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:45:37,700 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:45:37,707 [ scc.git] DEBUG Already up to date.
2024-07-12 00:45:37,707 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-07-12 00:45:38,095 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-07-12 00:45:38,095 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-07-12 00:45:38,101 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:45:38,101 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:38,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:38,109 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-07-12 00:45:38,116 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:38,121 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-07-12 00:45:38,133 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2024-07-12 00:45:38,133 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2024-07-12 00:45:38,133 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2024-07-12 00:45:38,133 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2024-07-12 00:45:38,133 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2024-07-12 00:45:38,133 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2024-07-12 00:45:38,133 [ scc.git] DEBUG Auto-merging setup.py
2024-07-12 00:45:38,133 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2024-07-12 00:45:38,133 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-12 00:45:38,133 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-12 00:45:38,140 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319'
2024-07-12 00:45:38,146 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0
2024-07-12 00:45:38,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:45:38,313 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-07-12 00:45:38,320 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319'
2024-07-12 00:45:38,326 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#120](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/consoleText) for more details.
Possible conflicts:
- Upstream changes
- setup.py
- omero_signup/signup_settings.py
- omero_signup/urls.py
- omero_signup/views.py
--conflicts
2024-07-12 00:45:38,335 [ scc.config] DEBUG Found github.token
2024-07-12 00:45:38,335 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2024-07-12 00:45:38,335 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:45:38,382 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:38,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:38,389 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:45:38,430 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:45:38,437 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b047af10> has no local changes
2024-07-12 00:45:38,437 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:45:38,445 [ scc.git] DEBUG [detached HEAD b167591] merge master -Dorg -Ssuccess-only
2024-07-12 00:45:38,446 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:45:38,446 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:45:38,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2024-07-12 00:45:39,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2024-07-12 00:45:39,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2024-07-12 00:45:40,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-07-12 00:45:40,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:45:41,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-07-12 00:45:41,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:45:41,617 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-07-12 00:45:41,617 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:45:41,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-07-12 00:45:41,617 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:41,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:41,629 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:45:41,641 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:45:41,641 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:45:41,652 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:45:41,663 [ scc.git] DEBUG Already up to date.
2024-07-12 00:45:41,664 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2024-07-12 00:45:42,061 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2024-07-12 00:45:42,061 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2024-07-12 00:45:42,068 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:45:42,068 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:42,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:42,075 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2024-07-12 00:45:42,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:42,092 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2024-07-12 00:45:42,111 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-12 00:45:42,116 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2024-07-12 00:45:42,117 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2024-07-12 00:45:42,117 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2024-07-12 00:45:42,117 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2024-07-12 00:45:42,117 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2024-07-12 00:45:42,117 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2024-07-12 00:45:42,117 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2024-07-12 00:45:42,117 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2024-07-12 00:45:42,117 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2024-07-12 00:45:42,120 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2024-07-12 00:45:42,120 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2024-07-12 00:45:42,120 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2024-07-12 00:45:42,120 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2024-07-12 00:45:42,120 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2024-07-12 00:45:42,120 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2024-07-12 00:45:42,120 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2024-07-12 00:45:42,120 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2024-07-12 00:45:42,121 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2024-07-12 00:45:42,121 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2024-07-12 00:45:42,121 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2024-07-12 00:45:42,121 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2024-07-12 00:45:42,121 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2024-07-12 00:45:42,121 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2024-07-12 00:45:42,121 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2024-07-12 00:45:42,122 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2024-07-12 00:45:42,122 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2024-07-12 00:45:42,122 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2024-07-12 00:45:42,122 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2024-07-12 00:45:42,122 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2024-07-12 00:45:42,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:45:42,279 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:45:42,346 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:42,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:42,354 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:45:42,428 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:45:42,438 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b041a700> has no local changes
2024-07-12 00:45:42,439 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:45:42,453 [ scc.git] DEBUG [detached HEAD 3f05f28] merge master -Dorg -Ssuccess-only
2024-07-12 00:45:42,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:45:42,454 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:45:42,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2024-07-12 00:45:42,692 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:45:42,692 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-07-12 00:45:42,692 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:42,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:42,702 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:45:42,713 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:45:42,714 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:45:42,729 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:45:42,741 [ scc.git] DEBUG Already up to date.
2024-07-12 00:45:42,742 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:45:42,742 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:42,742 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:42,753 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:45:42,821 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:42,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:42,830 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:45:42,890 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:45:42,900 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b0446e50> has no local changes
2024-07-12 00:45:42,901 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:45:42,913 [ scc.git] DEBUG [detached HEAD d30dae1] merge master -Dorg -Ssuccess-only
2024-07-12 00:45:42,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:45:42,914 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:45:43,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2
2024-07-12 00:45:43,115 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:45:43,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-07-12 00:45:43,116 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:43,116 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:43,129 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:45:43,145 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:45:43,146 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:45:43,156 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:45:43,166 [ scc.git] DEBUG Already up to date.
2024-07-12 00:45:43,167 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:45:43,167 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:43,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:43,176 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:45:43,283 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:43,284 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:43,295 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:45:43,350 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:45:43,358 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b03ee4f0> has no local changes
2024-07-12 00:45:43,359 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Already up to date.
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:45:43,370 [ scc.git] DEBUG [detached HEAD 8999439] merge master -Dorg -Ssuccess-only
2024-07-12 00:45:43,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:45:43,371 [ scc.git] INFO Overriding base-branch from master to main
2024-07-12 00:45:43,371 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:45:43,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2024-07-12 00:45:44,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2024-07-12 00:45:44,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2024-07-12 00:45:45,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2024-07-12 00:45:45,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-07-12 00:45:46,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:45:46,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-12 00:45:47,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-07-12 00:45:47,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:45:47,589 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-07-12 00:45:47,589 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:45:47,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-07-12 00:45:47,590 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:47,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:47,599 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2024-07-12 00:45:47,607 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:45:47,608 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2024-07-12 00:45:47,617 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2024-07-12 00:45:47,628 [ scc.git] DEBUG Already up to date.
2024-07-12 00:45:47,628 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2024-07-12 00:45:48,036 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2024-07-12 00:45:48,037 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2024-07-12 00:45:48,044 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:45:48,044 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:48,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:48,056 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-07-12 00:45:48,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:48,077 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-07-12 00:45:48,094 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2024-07-12 00:45:48,095 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2024-07-12 00:45:48,095 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-12 00:45:48,095 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-12 00:45:48,106 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-07-12 00:45:48,119 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-07-12 00:45:48,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:45:48,302 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-07-12 00:45:48,313 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-07-12 00:45:48,321 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#120](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2024-07-12 00:45:48,327 [ scc.config] DEBUG Found github.token
2024-07-12 00:45:48,327 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2024-07-12 00:45:48,328 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:45:48,396 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:48,397 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:48,406 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:45:48,478 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:45:48,490 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b039e4f0> has no local changes
2024-07-12 00:45:48,490 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:45:48,503 [ scc.git] DEBUG [detached HEAD 80628e0] merge master -Dorg -Ssuccess-only
2024-07-12 00:45:48,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:45:48,504 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:45:48,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2024-07-12 00:45:48,737 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:45:48,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-07-12 00:45:48,737 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:48,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:48,749 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:45:48,758 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:45:48,759 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:45:48,769 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:45:48,780 [ scc.git] DEBUG Already up to date.
2024-07-12 00:45:48,781 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:45:48,781 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:48,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:48,791 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:45:48,862 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:48,863 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:48,874 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:45:48,947 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:45:48,959 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b0408df0> has no local changes
2024-07-12 00:45:48,960 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:45:48,976 [ scc.git] DEBUG [detached HEAD 054cd83] merge master -Dorg -Ssuccess-only
2024-07-12 00:45:48,976 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:45:48,977 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:45:49,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2024-07-12 00:45:49,170 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:45:49,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-07-12 00:45:49,170 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:49,170 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:49,181 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:45:49,191 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:45:49,191 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:45:49,201 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:45:49,212 [ scc.git] DEBUG Already up to date.
2024-07-12 00:45:49,212 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:45:49,212 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:49,212 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:49,222 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:45:49,279 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:49,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:49,289 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:45:49,345 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:45:49,358 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b03c7700> has no local changes
2024-07-12 00:45:49,358 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:45:49,377 [ scc.git] DEBUG [detached HEAD 27d1956] merge master -Dorg -Ssuccess-only
2024-07-12 00:45:49,378 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:45:49,378 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:45:49,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2024-07-12 00:45:50,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2024-07-12 00:45:50,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2024-07-12 00:45:51,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-07-12 00:45:51,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:45:52,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-07-12 00:45:52,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:45:52,484 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2024-07-12 00:45:52,484 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:45:52,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-07-12 00:45:52,484 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:52,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:52,494 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-12 00:45:52,504 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:45:52,505 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-12 00:45:52,514 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-12 00:45:52,523 [ scc.git] DEBUG Already up to date.
2024-07-12 00:45:52,523 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2024-07-12 00:45:52,948 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2024-07-12 00:45:52,949 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2024-07-12 00:45:52,954 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:45:52,954 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:52,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:52,960 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-07-12 00:45:52,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:52,973 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-07-12 00:45:52,985 [ scc.git] DEBUG Auto-merging Dockerfile
2024-07-12 00:45:52,985 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2024-07-12 00:45:52,985 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-12 00:45:52,986 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-12 00:45:52,993 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-07-12 00:45:53,001 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-07-12 00:45:53,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:45:53,162 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-07-12 00:45:53,170 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-07-12 00:45:53,177 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#120](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2024-07-12 00:45:53,185 [ scc.config] DEBUG Found github.token
2024-07-12 00:45:53,185 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2024-07-12 00:45:53,185 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:45:53,228 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:45:53,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:45:53,235 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:45:53,285 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:45:53,294 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b0359df0> has no local changes
2024-07-12 00:45:53,295 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:45:53,305 [ scc.git] DEBUG [detached HEAD edd74f9] merge master -Dorg -Ssuccess-only
2024-07-12 00:45:53,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:45:53,306 [ scc.git] INFO Overriding base-branch from master to develop
2024-07-12 00:45:53,306 [ scc.repo] DEBUG ## PRs found:
2024-07-12 00:45:53,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-07-12 00:45:54,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-07-12 00:45:54,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-07-12 00:45:55,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-07-12 00:45:55,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-07-12 00:45:56,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-07-12 00:45:56,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-07-12 00:45:57,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-07-12 00:45:57,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-12 00:45:57,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-07-12 00:45:58,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-07-12 00:45:58,361 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-07-12 00:45:58,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-07-12 00:45:59,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-07-12 00:45:59,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-07-12 00:46:00,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-07-12 00:46:00,443 [ scc.repo] DEBUG ## Branches found:
2024-07-12 00:46:00,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-07-12 00:46:00,443 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:46:00,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:46:00,450 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-07-12 00:46:00,455 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-12 00:46:00,455 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-07-12 00:46:00,471 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-07-12 00:46:00,478 [ scc.git] DEBUG Already up to date.
2024-07-12 00:46:00,478 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-07-12 00:46:00,865 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-07-12 00:46:00,866 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-07-12 00:46:00,877 [ scc.git] DEBUG ## Unique users: []
2024-07-12 00:46:00,878 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:46:00,878 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:46:00,899 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-12 00:46:00,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:46:00,925 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-12 00:46:00,937 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-07-12 00:46:00,938 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-07-12 00:46:00,938 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-12 00:46:00,938 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-12 00:46:00,945 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636'
2024-07-12 00:46:00,952 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking
2024-07-12 00:46:01,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:01,117 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-12 00:46:01,125 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636'
2024-07-12 00:46:01,132 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#120](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-07-12 00:46:01,139 [ scc.config] DEBUG Found github.token
2024-07-12 00:46:01,139 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-07-12 00:46:01,139 [ scc.git] DEBUG Calling 'git submodule update'
2024-07-12 00:46:01,179 [ scc.git] DEBUG Get sha1 of %s
2024-07-12 00:46:01,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-12 00:46:01,186 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:46:01,261 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:46:01,273 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b039cc70> has no local changes
2024-07-12 00:46:01,273 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:46:01,283 [ scc.git] DEBUG [detached HEAD 7ad02f3] merge master -Dorg -Ssuccess-only
2024-07-12 00:46:01,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:01,283 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-12 00:46:01,363 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2024-07-12 00:46:01,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:01,545 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2024-07-12 00:46:01,551 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2024-07-12 00:46:01,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:01,953 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2024-07-12 00:46:01,959 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2024-07-12 00:46:02,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:02,352 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2024-07-12 00:46:02,359 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2024-07-12 00:46:02,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:02,802 [ scc.config] DEBUG Found submodule.omero-figure.url
2024-07-12 00:46:03,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:03,178 [ scc.config] DEBUG Found submodule.omero-figure.branch
2024-07-12 00:46:03,184 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2024-07-12 00:46:03,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:03,611 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2024-07-12 00:46:03,623 [ scc.config] DEBUG Found submodule.omero-gallery.url
2024-07-12 00:46:03,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:04,010 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2024-07-12 00:46:04,016 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2024-07-12 00:46:04,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:04,428 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2024-07-12 00:46:04,434 [ scc.config] DEBUG Found submodule.omero-mapr.url
2024-07-12 00:46:04,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:04,832 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2024-07-12 00:46:04,837 [ scc.config] DEBUG Found submodule.omero-metadata.url
2024-07-12 00:46:05,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:05,237 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2024-07-12 00:46:05,243 [ scc.config] DEBUG Found submodule.omero-parade.url
2024-07-12 00:46:05,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:05,686 [ scc.config] DEBUG Found submodule.omero-parade.branch
2024-07-12 00:46:05,700 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2024-07-12 00:46:06,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:06,080 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2024-07-12 00:46:06,089 [ scc.config] DEBUG Found submodule.omero-rois.url
2024-07-12 00:46:06,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:06,516 [ scc.config] DEBUG Found submodule.omero-signup.url
2024-07-12 00:46:06,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:06,926 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2024-07-12 00:46:07,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:07,319 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2024-07-12 00:46:07,324 [ scc.config] DEBUG Found submodule.omero-upload.url
2024-07-12 00:46:07,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:07,738 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2024-07-12 00:46:08,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:08,161 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2024-07-12 00:46:08,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:08,582 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2024-07-12 00:46:08,589 [ scc.config] DEBUG Found submodule.omero-weberror.url
2024-07-12 00:46:09,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:09,041 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2024-07-12 00:46:09,049 [ scc.config] DEBUG Found submodule.omero-webtest.url
2024-07-12 00:46:09,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:09,458 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2024-07-12 00:46:09,466 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2024-07-12 00:46:09,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:09,875 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2024-07-12 00:46:09,885 [ scc.config] DEBUG Found submodule.scripts.url
2024-07-12 00:46:10,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-12 00:46:10,282 [ scc.config] DEBUG Found submodule.scripts.branch
2024-07-12 00:46:10,282 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-07-12 00:46:10,370 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe8b0dbaaf0> has local changes
2024-07-12 00:46:10,371 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 25 jburel 'review message'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
- PR 54 dominikl 'Change rendering settings spec' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
- PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 63 sbesson 'Remove python-future dependency'
- PR 64 sbesson 'Fix thumbnail generation with missing rendering definition'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
Already up to date.
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Repository: ome/omero-figure
Excluded PRs:
- PR 577 Rdornier 'Fill rois' (user: Rdornier)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 64566080..fefe87cf
Previously merged:
- PR 575 Tom-TBT 'Label sorting with drag and drop'
Merged PRs:
- PR 549 will-moore 'Inset feature'
- PR 555 will-moore 'Points in shape editor'
- PR 560 will-moore 'Max projection bytes'
- PR 568 will-moore 'Remove numpy from tests_require in setup.py'
- PR 576 Rdornier 'Color picker - popup update'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 477 dependabot[bot] 'Bump ws and socket.io'
- PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Repository: ome/omero-metadata
Already up to date.
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Repository: ome/omero-upload
Already up to date.
Repository: ome/omero-virtual-microscope
Already up to date.
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Repository: openmicroscopy/omero-webtest
Already up to date.
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#120 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/120/)'
2024-07-12 00:46:10,389 [ scc.git] DEBUG [detached HEAD 701fb39] merge master -Dorg -Ssuccess-only
2024-07-12 00:46:10,389 [ scc.merge] INFO Repository: ome/omero-plugins
2024-07-12 00:46:10,389 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2024-07-12 00:46:10,389 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,389 [ scc.merge] INFO
2024-07-12 00:46:10,389 [ scc.merge] INFO
2024-07-12 00:46:10,389 [ scc.merge] INFO Repository: ome/minimal-omero-client
2024-07-12 00:46:10,389 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,389 [ scc.merge] INFO
2024-07-12 00:46:10,390 [ scc.merge] INFO
2024-07-12 00:46:10,390 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2024-07-12 00:46:10,390 [ scc.merge] INFO Excluded PRs:
2024-07-12 00:46:10,390 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2024-07-12 00:46:10,390 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,390 [ scc.merge] INFO
2024-07-12 00:46:10,390 [ scc.merge] INFO Merged PRs:
2024-07-12 00:46:10,390 [ scc.merge] INFO - PR 25 jburel 'review message'
2024-07-12 00:46:10,390 [ scc.merge] INFO
2024-07-12 00:46:10,390 [ scc.merge] INFO Repository: ome/omero-cli-render
2024-07-12 00:46:10,390 [ scc.merge] INFO Excluded PRs:
2024-07-12 00:46:10,390 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
2024-07-12 00:46:10,390 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft)
2024-07-12 00:46:10,390 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2024-07-12 00:46:10,390 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
2024-07-12 00:46:10,390 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,390 [ scc.merge] INFO
2024-07-12 00:46:10,390 [ scc.merge] INFO Merged PRs:
2024-07-12 00:46:10,390 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2024-07-12 00:46:10,390 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency'
2024-07-12 00:46:10,390 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition'
2024-07-12 00:46:10,390 [ scc.merge] INFO
2024-07-12 00:46:10,390 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2024-07-12 00:46:10,390 [ scc.merge] INFO Excluded PRs:
2024-07-12 00:46:10,390 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
2024-07-12 00:46:10,390 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,390 [ scc.merge] INFO
2024-07-12 00:46:10,390 [ scc.merge] INFO Merged PRs:
2024-07-12 00:46:10,390 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2024-07-12 00:46:10,390 [ scc.merge] INFO
2024-07-12 00:46:10,390 [ scc.merge] INFO Conflicting PRs (not included):
2024-07-12 00:46:10,390 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests'
2024-07-12 00:46:10,391 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID'
2024-07-12 00:46:10,391 [ scc.merge] INFO
2024-07-12 00:46:10,391 [ scc.merge] INFO Repository: ome/omero-figure
2024-07-12 00:46:10,391 [ scc.merge] INFO Excluded PRs:
2024-07-12 00:46:10,391 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' (user: Rdornier)
2024-07-12 00:46:10,391 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2024-07-12 00:46:10,391 [ scc.merge] INFO Updating 64566080..fefe87cf
2024-07-12 00:46:10,391 [ scc.merge] INFO Previously merged:
2024-07-12 00:46:10,391 [ scc.merge] INFO - PR 575 Tom-TBT 'Label sorting with drag and drop'
2024-07-12 00:46:10,391 [ scc.merge] INFO
2024-07-12 00:46:10,391 [ scc.merge] INFO Merged PRs:
2024-07-12 00:46:10,391 [ scc.merge] INFO - PR 549 will-moore 'Inset feature'
2024-07-12 00:46:10,391 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor'
2024-07-12 00:46:10,391 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes'
2024-07-12 00:46:10,391 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py'
2024-07-12 00:46:10,391 [ scc.merge] INFO - PR 576 Rdornier 'Color picker - popup update'
2024-07-12 00:46:10,391 [ scc.merge] INFO
2024-07-12 00:46:10,391 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2024-07-12 00:46:10,391 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,391 [ scc.merge] INFO
2024-07-12 00:46:10,391 [ scc.merge] INFO Merged PRs:
2024-07-12 00:46:10,391 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2024-07-12 00:46:10,391 [ scc.merge] INFO
2024-07-12 00:46:10,391 [ scc.merge] INFO Repository: ome/omero-gallery
2024-07-12 00:46:10,391 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,391 [ scc.merge] INFO
2024-07-12 00:46:10,391 [ scc.merge] INFO Merged PRs:
2024-07-12 00:46:10,391 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
2024-07-12 00:46:10,391 [ scc.merge] INFO
2024-07-12 00:46:10,391 [ scc.merge] INFO Repository: ome/omero-iviewer
2024-07-12 00:46:10,391 [ scc.merge] INFO Excluded PRs:
2024-07-12 00:46:10,391 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2024-07-12 00:46:10,391 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2024-07-12 00:46:10,392 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,392 [ scc.merge] INFO
2024-07-12 00:46:10,392 [ scc.merge] INFO Merged PRs:
2024-07-12 00:46:10,392 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2024-07-12 00:46:10,392 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2024-07-12 00:46:10,392 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2024-07-12 00:46:10,392 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io'
2024-07-12 00:46:10,392 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5'
2024-07-12 00:46:10,392 [ scc.merge] INFO
2024-07-12 00:46:10,392 [ scc.merge] INFO Repository: ome/omero-mapr
2024-07-12 00:46:10,392 [ scc.merge] INFO Excluded PRs:
2024-07-12 00:46:10,392 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2024-07-12 00:46:10,392 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,392 [ scc.merge] INFO
2024-07-12 00:46:10,392 [ scc.merge] INFO Merged PRs:
2024-07-12 00:46:10,392 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2024-07-12 00:46:10,392 [ scc.merge] INFO
2024-07-12 00:46:10,392 [ scc.merge] INFO Repository: ome/omero-metadata
2024-07-12 00:46:10,392 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,392 [ scc.merge] INFO
2024-07-12 00:46:10,392 [ scc.merge] INFO Conflicting PRs (not included):
2024-07-12 00:46:10,392 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-07-12 00:46:10,392 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-07-12 00:46:10,392 [ scc.merge] INFO
2024-07-12 00:46:10,392 [ scc.merge] INFO Repository: ome/omero-parade
2024-07-12 00:46:10,392 [ scc.merge] INFO Excluded PRs:
2024-07-12 00:46:10,392 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2024-07-12 00:46:10,392 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2024-07-12 00:46:10,392 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2024-07-12 00:46:10,392 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,392 [ scc.merge] INFO
2024-07-12 00:46:10,392 [ scc.merge] INFO Merged PRs:
2024-07-12 00:46:10,393 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-07-12 00:46:10,393 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-07-12 00:46:10,393 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-07-12 00:46:10,393 [ scc.merge] INFO
2024-07-12 00:46:10,393 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2024-07-12 00:46:10,393 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,393 [ scc.merge] INFO
2024-07-12 00:46:10,393 [ scc.merge] INFO Merged PRs:
2024-07-12 00:46:10,393 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel'
2024-07-12 00:46:10,393 [ scc.merge] INFO
2024-07-12 00:46:10,393 [ scc.merge] INFO Repository: ome/omero-rois
2024-07-12 00:46:10,393 [ scc.merge] INFO Excluded PRs:
2024-07-12 00:46:10,393 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-07-12 00:46:10,393 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,393 [ scc.merge] INFO
2024-07-12 00:46:10,393 [ scc.merge] INFO Merged PRs:
2024-07-12 00:46:10,393 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-07-12 00:46:10,393 [ scc.merge] INFO
2024-07-12 00:46:10,393 [ scc.merge] INFO Repository: ome/omero-signup
2024-07-12 00:46:10,393 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,393 [ scc.merge] INFO
2024-07-12 00:46:10,393 [ scc.merge] INFO Conflicting PRs (not included):
2024-07-12 00:46:10,393 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2024-07-12 00:46:10,393 [ scc.merge] INFO
2024-07-12 00:46:10,393 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2024-07-12 00:46:10,393 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,393 [ scc.merge] INFO
2024-07-12 00:46:10,393 [ scc.merge] INFO Merged PRs:
2024-07-12 00:46:10,394 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-07-12 00:46:10,394 [ scc.merge] INFO
2024-07-12 00:46:10,394 [ scc.merge] INFO Repository: ome/omero-upload
2024-07-12 00:46:10,394 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,394 [ scc.merge] INFO
2024-07-12 00:46:10,394 [ scc.merge] INFO
2024-07-12 00:46:10,394 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2024-07-12 00:46:10,394 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,394 [ scc.merge] INFO
2024-07-12 00:46:10,394 [ scc.merge] INFO
2024-07-12 00:46:10,394 [ scc.merge] INFO Repository: ome/omero-web-zarr
2024-07-12 00:46:10,394 [ scc.merge] INFO Excluded PRs:
2024-07-12 00:46:10,394 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2024-07-12 00:46:10,394 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,394 [ scc.merge] INFO
2024-07-12 00:46:10,394 [ scc.merge] INFO Conflicting PRs (not included):
2024-07-12 00:46:10,394 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-07-12 00:46:10,394 [ scc.merge] INFO
2024-07-12 00:46:10,394 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2024-07-12 00:46:10,394 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,394 [ scc.merge] INFO
2024-07-12 00:46:10,394 [ scc.merge] INFO
2024-07-12 00:46:10,394 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2024-07-12 00:46:10,394 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,394 [ scc.merge] INFO
2024-07-12 00:46:10,394 [ scc.merge] INFO
2024-07-12 00:46:10,394 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2024-07-12 00:46:10,395 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,395 [ scc.merge] INFO
2024-07-12 00:46:10,395 [ scc.merge] INFO Conflicting PRs (not included):
2024-07-12 00:46:10,395 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2024-07-12 00:46:10,395 [ scc.merge] INFO
2024-07-12 00:46:10,395 [ scc.merge] INFO Repository: ome/scripts
2024-07-12 00:46:10,395 [ scc.merge] INFO Excluded PRs:
2024-07-12 00:46:10,395 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-07-12 00:46:10,395 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-07-12 00:46:10,395 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-07-12 00:46:10,395 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-07-12 00:46:10,395 [ scc.merge] INFO Already up to date.
2024-07-12 00:46:10,395 [ scc.merge] INFO
2024-07-12 00:46:10,395 [ scc.merge] INFO Conflicting PRs (not included):
2024-07-12 00:46:10,395 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-07-12 00:46:10,395 [ scc.merge] INFO
2024-07-12 00:46:10,395 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-07-12 00:46:10,395 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-07-12 00:46:10,402 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-07-12 00:46:10,408 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,414 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-07-12 00:46:10,414 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,421 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,421 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-07-12 00:46:10,421 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,428 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,428 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-07-12 00:46:10,428 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-07-12 00:46:10,435 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,441 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,441 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-07-12 00:46:10,441 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,447 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,447 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-07-12 00:46:10,447 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-07-12 00:46:10,453 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,460 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,461 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-07-12 00:46:10,461 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-07-12 00:46:10,469 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-07-12 00:46:10,478 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-07-12 00:46:10,484 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-07-12 00:46:10,491 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-07-12 00:46:10,498 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-07-12 00:46:10,504 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-07-12 00:46:10,511 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-07-12 00:46:10,518 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-07-12 00:46:10,524 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-07-12 00:46:10,532 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-07-12 00:46:10,545 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-07-12 00:46:10,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-07-12 00:46:10,553 [ scc.git] DEBUG Calling 'git remote'
2024-07-12 00:46:10,561 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 1573cb2] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 027b3e6
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from 53e3f42
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 9b73dd9
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 64566080
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from e5b3ca3
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 56f4435
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from a8f380f
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 9631b15
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from e2fc5ec
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from 5d441c2
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from 18bccb6
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from 5c752d5
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from c8610db
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
nothing to commit, working tree clean
Entering 'omero-upload'
HEAD detached from aca9e9c
nothing to commit, working tree clean
Entering 'omero-virtual-microscope'
HEAD detached from deab817
nothing to commit, working tree clean
Entering 'omero-web-zarr'
HEAD detached from 67bb245
nothing to commit, working tree clean
Entering 'omero-weberror'
HEAD detached from adfa132
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 8da48e1
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
nothing to commit, working tree clean
Entering 'scripts'
HEAD detached from c20d273
nothing to commit, working tree clean
[detached HEAD 9c41797] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-07-12 00:46:57,463 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-07-12 00:47:06,517 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-07-12 00:47:08,895 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-07-12 00:47:13,488 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-07-12 00:48:01,880 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS