Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 1f37dba8ad79dad8a2455842a213ac50b6987233 (refs/remotes/origin/master) Commit message: "Merge pull request #386 from ome/dependabot/submodules/omero-figure-47f4948" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 1f37dba8ad79dad8a2455842a213ac50b6987233 # timeout=10 > git rev-list --no-walk 1f37dba8ad79dad8a2455842a213ac50b6987233 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 165 [Pipeline] sh > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Downloading urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.8-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.7.4-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Downloading urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.7.4-py3-none-any.whl (162 kB) Using cached cffi-1.17.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (444 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.8-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.7.4 cffi-1.17.0 charset-normalizer-3.3.2 cryptography-43.0.0 future-1.0.0 idna-3.8 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-08-29 16:00:27,325 [ scc.config] DEBUG Found github.token 2024-08-29 16:00:27,328 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-08-29 16:00:27,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:00:27,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:00:28,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-08-29 16:00:28,294 [ scc.gh] DEBUG 4984 remaining from 5000 (Reset at 16:08 2024-08-29 16:00:28,294 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:00:28,297 [ scc.git] DEBUG Check current status 2024-08-29 16:00:28,297 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:00:28,301 [ scc.git] DEBUG 1f37dba Merge pull request #386 from ome/dependabot/submodules/omero-figure-47f4948 2024-08-29 16:00:28,301 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:00:28,342 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-08-29 16:00:28,344 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-08-29 16:00:28,347 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-08-29 16:00:28,350 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-08-29 16:00:28,357 [ scc.git] DEBUG 47f494861cc4a09399833c3f8a63b8399a735e52 omero-figure (v7.0.0-28-g47f49486) 2024-08-29 16:00:28,360 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-08-29 16:00:28,362 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-08-29 16:00:28,365 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-08-29 16:00:28,368 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-08-29 16:00:28,370 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-08-29 16:00:28,373 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-08-29 16:00:28,375 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-08-29 16:00:28,378 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-08-29 16:00:28,381 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-08-29 16:00:28,384 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-08-29 16:00:28,386 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-08-29 16:00:28,388 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-08-29 16:00:28,391 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-08-29 16:00:28,393 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-08-29 16:00:28,395 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-08-29 16:00:28,398 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-08-29 16:00:28,401 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-08-29 16:00:28,404 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:00:28,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-08-29 16:00:29,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:00:29,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:00:30,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:00:30,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:00:30,484 [ scc.git] DEBUG Resetting... 2024-08-29 16:00:30,484 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-08-29 16:00:30,887 [ scc.git] DEBUG HEAD is now at 1f37dba Merge pull request #386 from ome/dependabot/submodules/omero-figure-47f4948 2024-08-29 16:00:30,887 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-08-29 16:00:30,976 [ scc.git] DEBUG Check current status 2024-08-29 16:00:30,976 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:00:30,979 [ scc.git] DEBUG 1f37dba Merge pull request #386 from ome/dependabot/submodules/omero-figure-47f4948 2024-08-29 16:00:30,979 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:00:31,020 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-08-29 16:00:31,022 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-08-29 16:00:31,025 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-08-29 16:00:31,027 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-08-29 16:00:31,035 [ scc.git] DEBUG 47f494861cc4a09399833c3f8a63b8399a735e52 omero-figure (v7.0.0-28-g47f49486) 2024-08-29 16:00:31,037 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-08-29 16:00:31,040 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-08-29 16:00:31,043 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-08-29 16:00:31,046 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-08-29 16:00:31,048 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-08-29 16:00:31,051 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-08-29 16:00:31,053 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-08-29 16:00:31,056 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-08-29 16:00:31,058 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-08-29 16:00:31,061 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-08-29 16:00:31,064 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-08-29 16:00:31,066 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-08-29 16:00:31,068 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-08-29 16:00:31,071 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-08-29 16:00:31,073 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-08-29 16:00:31,075 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-08-29 16:00:31,079 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-08-29 16:00:31,079 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-08-29 16:00:31,079 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-08-29 16:00:31,079 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-08-29 16:00:31,080 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-08-29 16:00:31,080 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-08-29 16:00:31,080 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:00:31,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-08-29 16:00:31,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/387 HTTP/1.1" 200 None 2024-08-29 16:00:31,758 [ scc.repo] DEBUG # ... Include label: dependencies 2024-08-29 16:00:31,758 [ scc.repo] DEBUG - PR 387 dependabot[bot] 'Bump omero-figure from `47f4948` to `cbdd365`' 2024-08-29 16:00:31,758 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:00:31,758 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:00:31,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:00:31,762 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:00:31,765 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:00:31,765 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:00:31,768 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:00:31,772 [ scc.git] DEBUG Already up to date. 2024-08-29 16:00:31,772 [ scc.git] DEBUG Calling 'git fetch origin pull/387/head' 2024-08-29 16:00:32,076 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-08-29 16:00:32,076 [ scc.git] DEBUG * branch refs/pull/387/head -> FETCH_HEAD 2024-08-29 16:00:32,080 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:00:32,080 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:00:32,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:00:32,084 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...28454b857acac695aa8bb02e890603d821470cd6' 2024-08-29 16:00:32,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:00:32,090 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 387 (Bump omero-figure from `47f4948` to `cbdd365`) 28454b857acac695aa8bb02e890603d821470cd6' 2024-08-29 16:00:32,105 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:00:32,107 [ scc.git] DEBUG omero-figure | 2 +- 2024-08-29 16:00:32,107 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-08-29 16:00:32,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:00:32,299 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:00:32,358 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'cbdd365756caa80353d6b3ffd66259efbda098ee' 2024-08-29 16:00:32,358 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:00:32,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:00:32,362 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:00:32,435 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fed2fb06760> has no local changes 2024-08-29 16:00:32,435 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 387 dependabot[bot] 'Bump omero-figure from `47f4948` to `cbdd365`' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:00:32,499 [ scc.git] DEBUG [detached HEAD 80af483] merge master -Dorg -Snone 2024-08-29 16:00:32,499 [ scc.merge] INFO Repository: ome/omero-plugins 2024-08-29 16:00:32,499 [ scc.merge] INFO Already up to date. 2024-08-29 16:00:32,499 [ scc.merge] INFO 2024-08-29 16:00:32,499 [ scc.merge] INFO Merged PRs: 2024-08-29 16:00:32,499 [ scc.merge] INFO - PR 387 dependabot[bot] 'Bump omero-figure from `47f4948` to `cbdd365`' 2024-08-29 16:00:32,499 [ scc.merge] INFO 2024-08-29 16:00:32,499 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-08-29 16:00:32,499 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-08-29 16:00:39,899 [ scc.config] DEBUG Found github.token 2024-08-29 16:00:39,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-08-29 16:00:40,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:00:40,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:00:40,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-08-29 16:00:40,848 [ scc.gh] DEBUG 4974 remaining from 5000 (Reset at 16:08 2024-08-29 16:00:40,849 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:00:40,852 [ scc.git] DEBUG Check current status 2024-08-29 16:00:40,852 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:00:40,855 [ scc.git] DEBUG 80af483 merge master -Dorg -Snone 2024-08-29 16:00:40,855 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:00:40,896 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-08-29 16:00:40,899 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-08-29 16:00:40,901 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-08-29 16:00:40,904 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-08-29 16:00:40,912 [ scc.git] DEBUG cbdd365756caa80353d6b3ffd66259efbda098ee omero-figure (v7.0.0-39-gcbdd3657) 2024-08-29 16:00:40,914 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-08-29 16:00:40,917 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-08-29 16:00:40,920 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-08-29 16:00:40,923 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-08-29 16:00:40,925 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-08-29 16:00:40,928 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-08-29 16:00:40,930 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-08-29 16:00:40,933 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-08-29 16:00:40,935 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-08-29 16:00:40,938 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-08-29 16:00:40,941 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-08-29 16:00:40,943 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-08-29 16:00:40,945 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-08-29 16:00:40,948 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-08-29 16:00:40,950 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-08-29 16:00:40,952 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-08-29 16:00:40,956 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-08-29 16:00:40,959 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:00:40,959 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-08-29 16:00:40,961 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-08-29 16:00:41,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-08-29 16:00:41,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:00:42,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:00:42,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:00:43,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:00:43,002 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:00:43,066 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-08-29 16:00:43,066 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:00:43,069 [ scc.git] DEBUG Check current status 2024-08-29 16:00:43,069 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:00:43,072 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-08-29 16:00:43,073 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:00:43,108 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:00:43,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-08-29 16:00:43,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:00:44,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:00:44,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:00:45,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:00:45,160 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:00:45,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:00:45,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-08-29 16:00:45,195 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:00:45,198 [ scc.git] DEBUG Check current status 2024-08-29 16:00:45,198 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:00:45,201 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-08-29 16:00:45,201 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:00:45,237 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:00:45,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-08-29 16:00:46,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:00:46,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:00:46,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:00:47,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:00:47,339 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:00:47,374 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:00:47,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-08-29 16:00:47,375 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:00:47,378 [ scc.git] DEBUG Check current status 2024-08-29 16:00:47,378 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:00:47,381 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-08-29 16:00:47,382 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:00:47,418 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:00:47,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-08-29 16:00:48,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:00:48,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:00:49,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:00:49,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:00:49,515 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:00:49,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:00:49,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-08-29 16:00:49,549 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:00:49,552 [ scc.git] DEBUG Check current status 2024-08-29 16:00:49,553 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:00:49,556 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-08-29 16:00:49,556 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:00:49,592 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:00:49,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-08-29 16:00:50,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:00:50,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:00:51,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:00:51,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:00:51,688 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:00:51,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:00:51,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-08-29 16:00:51,723 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:00:51,727 [ scc.git] DEBUG Check current status 2024-08-29 16:00:51,727 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:00:51,731 [ scc.git] DEBUG cbdd3657 Merge pull request #576 from Rdornier/fix-color-picker-popup 2024-08-29 16:00:51,731 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:00:51,767 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:00:52,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-08-29 16:00:52,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:00:53,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:00:53,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:00:53,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:00:53,910 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:00:53,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:00:53,945 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-08-29 16:00:53,945 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:00:53,949 [ scc.git] DEBUG Check current status 2024-08-29 16:00:53,949 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:00:53,952 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-08-29 16:00:53,952 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:00:53,989 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:00:54,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-08-29 16:00:54,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:00:55,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:00:55,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:00:56,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:00:56,147 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:00:56,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:00:56,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-08-29 16:00:56,181 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:00:56,185 [ scc.git] DEBUG Check current status 2024-08-29 16:00:56,185 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:00:56,188 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-08-29 16:00:56,188 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:00:56,224 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:00:56,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-08-29 16:00:57,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:00:57,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:00:57,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:00:58,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:00:58,290 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:00:58,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:00:58,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-08-29 16:00:58,325 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:00:58,328 [ scc.git] DEBUG Check current status 2024-08-29 16:00:58,328 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:00:58,332 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-08-29 16:00:58,332 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:00:58,368 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:00:58,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-08-29 16:00:59,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:00:59,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:01:00,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:01:00,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:01:00,509 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:00,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:00,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-08-29 16:01:00,544 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:01:00,547 [ scc.git] DEBUG Check current status 2024-08-29 16:01:00,547 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:01:00,551 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-08-29 16:01:00,551 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:01:00,588 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:01:00,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-08-29 16:01:01,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:01:01,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:01:02,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:01:02,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:01:02,665 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:02,700 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:02,700 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-08-29 16:01:02,701 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:01:02,704 [ scc.git] DEBUG Check current status 2024-08-29 16:01:02,704 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:01:02,708 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-08-29 16:01:02,708 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:01:02,746 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:01:03,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-08-29 16:01:03,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:01:04,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:01:04,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:01:04,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:01:04,915 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:04,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:04,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-08-29 16:01:04,950 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:01:04,954 [ scc.git] DEBUG Check current status 2024-08-29 16:01:04,954 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:01:04,958 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-08-29 16:01:04,958 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:01:04,994 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:01:05,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-08-29 16:01:05,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:01:06,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:01:06,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:01:07,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:01:07,052 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:07,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:07,088 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-08-29 16:01:07,088 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:01:07,091 [ scc.git] DEBUG Check current status 2024-08-29 16:01:07,091 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:01:07,095 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-08-29 16:01:07,095 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:01:07,132 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:01:07,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-08-29 16:01:08,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:01:08,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:01:08,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:01:09,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:01:09,257 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:09,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:09,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-08-29 16:01:09,292 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:01:09,295 [ scc.git] DEBUG Check current status 2024-08-29 16:01:09,295 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:01:09,299 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-08-29 16:01:09,299 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:01:09,336 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:01:09,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-08-29 16:01:10,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:01:10,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:01:11,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:01:11,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:01:11,496 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:11,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:11,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-08-29 16:01:11,531 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:01:11,535 [ scc.git] DEBUG Check current status 2024-08-29 16:01:11,535 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:01:11,539 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-08-29 16:01:11,539 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:01:11,576 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:01:11,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-08-29 16:01:12,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:01:12,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:01:13,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:01:13,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:01:13,712 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:13,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:13,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-08-29 16:01:13,747 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:01:13,751 [ scc.git] DEBUG Check current status 2024-08-29 16:01:13,751 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:01:13,755 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-08-29 16:01:13,755 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:01:13,792 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:01:14,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-08-29 16:01:14,121 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-08-29 16:01:14,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-08-29 16:01:14,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:01:15,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:01:15,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:01:16,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:01:16,031 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:16,066 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:16,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-08-29 16:01:16,067 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:01:16,071 [ scc.git] DEBUG Check current status 2024-08-29 16:01:16,071 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:01:16,075 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-08-29 16:01:16,075 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:01:16,112 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:01:16,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-08-29 16:01:16,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:01:17,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:01:17,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:01:18,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:01:18,198 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:18,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:18,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-08-29 16:01:18,234 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:01:18,238 [ scc.git] DEBUG Check current status 2024-08-29 16:01:18,238 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:01:18,242 [ scc.git] DEBUG deab817 update setup-python to v4 2024-08-29 16:01:18,242 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:01:18,280 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:01:18,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-08-29 16:01:19,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:01:19,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:01:19,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:01:20,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:01:20,347 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:20,382 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:20,382 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-08-29 16:01:20,383 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:01:20,386 [ scc.git] DEBUG Check current status 2024-08-29 16:01:20,386 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:01:20,390 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-08-29 16:01:20,391 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:01:20,428 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:01:20,429 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-08-29 16:01:20,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-08-29 16:01:21,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:01:21,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:01:22,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:01:22,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:01:22,506 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:22,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:22,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-08-29 16:01:22,542 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:01:22,546 [ scc.git] DEBUG Check current status 2024-08-29 16:01:22,546 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:01:22,550 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-08-29 16:01:22,550 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:01:22,588 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:01:22,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-08-29 16:01:22,945 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-08-29 16:01:23,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-08-29 16:01:23,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:01:24,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:01:24,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:01:24,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:01:24,895 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:24,930 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:24,930 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-08-29 16:01:24,930 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:01:24,934 [ scc.git] DEBUG Check current status 2024-08-29 16:01:24,935 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:01:24,939 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-08-29 16:01:24,939 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:01:24,976 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:01:25,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-08-29 16:01:25,300 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-08-29 16:01:25,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-08-29 16:01:25,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:01:26,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:01:26,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:01:27,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:01:27,250 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:27,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:27,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-08-29 16:01:27,285 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:01:27,289 [ scc.git] DEBUG Check current status 2024-08-29 16:01:27,289 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:01:27,293 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-08-29 16:01:27,294 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:01:27,331 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:01:27,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-08-29 16:01:28,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:01:28,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:01:28,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:01:29,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:01:29,376 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:29,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:29,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-08-29 16:01:29,412 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-08-29 16:01:29,416 [ scc.git] DEBUG Check current status 2024-08-29 16:01:29,416 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:01:29,420 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-08-29 16:01:29,420 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:01:29,458 [ scc.config] DEBUG Found remote.origin.url 2024-08-29 16:01:29,458 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-08-29 16:01:29,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-08-29 16:01:29,778 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-08-29 16:01:30,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-08-29 16:01:30,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-08-29 16:01:30,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-08-29 16:01:31,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-08-29 16:01:31,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-08-29 16:01:31,708 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:31,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:31,743 [ scc.git] DEBUG Resetting... 2024-08-29 16:01:31,743 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-08-29 16:01:31,752 [ scc.git] DEBUG HEAD is now at 80af483 merge master -Dorg -Snone 2024-08-29 16:01:31,752 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-08-29 16:01:31,841 [ scc.git] DEBUG Check current status 2024-08-29 16:01:31,841 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-08-29 16:01:31,845 [ scc.git] DEBUG 80af483 merge master -Dorg -Snone 2024-08-29 16:01:31,845 [ scc.git] DEBUG Calling 'git submodule status' 2024-08-29 16:01:31,887 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-08-29 16:01:31,889 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-08-29 16:01:31,892 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-08-29 16:01:31,894 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-08-29 16:01:31,902 [ scc.git] DEBUG cbdd365756caa80353d6b3ffd66259efbda098ee omero-figure (v7.0.0-39-gcbdd3657) 2024-08-29 16:01:31,905 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-08-29 16:01:31,907 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-08-29 16:01:31,910 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-08-29 16:01:31,913 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-08-29 16:01:31,915 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-08-29 16:01:31,918 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-08-29 16:01:31,920 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-08-29 16:01:31,923 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-08-29 16:01:31,925 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-08-29 16:01:31,928 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-08-29 16:01:31,931 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-08-29 16:01:31,933 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-08-29 16:01:31,935 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-08-29 16:01:31,937 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-08-29 16:01:31,940 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-08-29 16:01:31,942 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-08-29 16:01:31,946 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-08-29 16:01:31,946 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-08-29 16:01:31,946 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-08-29 16:01:31,946 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-08-29 16:01:31,947 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-08-29 16:01:31,947 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-08-29 16:01:31,947 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-08-29 16:01:31,947 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:01:32,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-08-29 16:01:32,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/387 HTTP/1.1" 200 None 2024-08-29 16:01:32,817 [ scc.repo] DEBUG # ... Include label: dependencies 2024-08-29 16:01:33,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/28454b857acac695aa8bb02e890603d821470cd6 HTTP/1.1" 200 None 2024-08-29 16:01:33,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/28454b857acac695aa8bb02e890603d821470cd6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:01:34,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/28454b857acac695aa8bb02e890603d821470cd6 HTTP/1.1" 200 None 2024-08-29 16:01:34,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/28454b857acac695aa8bb02e890603d821470cd6?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:01:34,804 [ scc.repo] DEBUG - PR 387 dependabot[bot] 'Bump omero-figure from `47f4948` to `cbdd365`' 2024-08-29 16:01:34,804 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:01:34,804 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:01:34,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:01:34,809 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:01:34,813 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:01:34,813 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:01:34,818 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:01:34,823 [ scc.git] DEBUG Already up to date. 2024-08-29 16:01:34,823 [ scc.git] DEBUG Calling 'git fetch origin pull/387/head' 2024-08-29 16:01:35,156 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-08-29 16:01:35,156 [ scc.git] DEBUG * branch refs/pull/387/head -> FETCH_HEAD 2024-08-29 16:01:35,160 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:01:35,160 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:01:35,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:01:35,165 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...28454b857acac695aa8bb02e890603d821470cd6' 2024-08-29 16:01:35,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:01:35,173 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 387 (Bump omero-figure from `47f4948` to `cbdd365`) 28454b857acac695aa8bb02e890603d821470cd6' 2024-08-29 16:01:35,178 [ scc.git] DEBUG Already up to date. 2024-08-29 16:01:35,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:01:35,336 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:01:35,384 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:01:35,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:01:35,389 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:01:35,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-08-29 16:01:36,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-08-29 16:01:36,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-08-29 16:01:37,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:01:37,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:01:38,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-08-29 16:01:38,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:01:38,504 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-08-29 16:01:38,504 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:01:38,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-08-29 16:01:38,504 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:01:38,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:01:38,509 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:01:38,513 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:01:38,513 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:01:38,518 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:01:38,523 [ scc.git] DEBUG Already up to date. 2024-08-29 16:01:38,523 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-08-29 16:01:38,816 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-08-29 16:01:38,817 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-08-29 16:01:38,820 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:01:38,820 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:01:38,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:01:38,824 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-08-29 16:01:38,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:01:38,833 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-08-29 16:01:38,842 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:01:38,844 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-08-29 16:01:38,844 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-08-29 16:01:38,844 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-08-29 16:01:38,844 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-08-29 16:01:38,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:01:38,978 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:01:39,013 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:01:39,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:01:39,017 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:39,053 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:01:39,058 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92dfc1bb0> has no local changes 2024-08-29 16:01:39,059 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:01:39,066 [ scc.git] DEBUG [detached HEAD a2ac6ac] merge master -Dorg -Ssuccess-only 2024-08-29 16:01:39,066 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:39,066 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:01:39,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-08-29 16:01:40,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-08-29 16:01:40,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-08-29 16:01:41,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-08-29 16:01:41,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:01:41,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:01:42,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-08-29 16:01:42,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:01:42,780 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-08-29 16:01:43,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-08-29 16:01:43,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-08-29 16:01:43,750 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:01:43,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-08-29 16:01:43,750 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:01:43,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:01:43,755 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:01:43,759 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:01:43,759 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:01:43,764 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:01:43,769 [ scc.git] DEBUG Already up to date. 2024-08-29 16:01:43,769 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-08-29 16:01:44,086 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-08-29 16:01:44,087 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-08-29 16:01:44,090 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:01:44,090 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:01:44,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:01:44,094 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-08-29 16:01:44,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:01:44,103 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-08-29 16:01:44,111 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:01:44,113 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-08-29 16:01:44,113 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-08-29 16:01:44,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:01:44,263 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:01:44,298 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:01:44,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:01:44,302 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:44,337 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:01:44,342 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92cf5ab80> has no local changes 2024-08-29 16:01:44,342 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:01:44,349 [ scc.git] DEBUG [detached HEAD 0420360] merge master -Dorg -Ssuccess-only 2024-08-29 16:01:44,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:44,350 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:01:44,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-08-29 16:01:45,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-08-29 16:01:45,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-08-29 16:01:46,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-08-29 16:01:46,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-08-29 16:01:47,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-08-29 16:01:47,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:01:48,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-08-29 16:01:48,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:01:48,516 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-08-29 16:01:48,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-08-29 16:01:49,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-08-29 16:01:49,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-08-29 16:01:50,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-08-29 16:01:50,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-08-29 16:01:50,838 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:01:50,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-08-29 16:01:50,839 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:01:50,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:01:50,843 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:01:50,848 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:01:50,848 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:01:50,852 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:01:50,857 [ scc.git] DEBUG Already up to date. 2024-08-29 16:01:50,857 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-08-29 16:01:51,159 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-08-29 16:01:51,159 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-08-29 16:01:51,162 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:01:51,162 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:01:51,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:01:51,167 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-08-29 16:01:51,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:01:51,176 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-08-29 16:01:51,185 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-08-29 16:01:51,186 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:01:51,189 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-08-29 16:01:51,189 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-08-29 16:01:51,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:01:51,320 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:01:51,355 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:01:51,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:01:51,359 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:01:51,394 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:01:51,399 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92dfc1b80> has no local changes 2024-08-29 16:01:51,399 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:01:51,407 [ scc.git] DEBUG [detached HEAD 13319f5] merge master -Dorg -Ssuccess-only 2024-08-29 16:01:51,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:01:51,407 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:01:51,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-08-29 16:01:52,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-08-29 16:01:52,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-08-29 16:01:53,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-08-29 16:01:53,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-08-29 16:01:54,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:01:54,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:01:54,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-08-29 16:01:55,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-08-29 16:01:55,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-08-29 16:01:56,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-08-29 16:01:56,363 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-08-29 16:01:56,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-08-29 16:01:57,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-08-29 16:01:57,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-08-29 16:01:58,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-08-29 16:01:58,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:01:59,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-08-29 16:01:59,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:01:59,683 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-08-29 16:02:00,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-08-29 16:02:00,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-08-29 16:02:01,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-08-29 16:02:01,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:02:02,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-08-29 16:02:02,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:02:02,688 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-08-29 16:02:02,688 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:02:02,688 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-08-29 16:02:02,688 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:02:02,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:02,693 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:02:02,698 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:02:02,698 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:02:02,703 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:02:02,708 [ scc.git] DEBUG Already up to date. 2024-08-29 16:02:02,708 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-08-29 16:02:03,024 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-08-29 16:02:03,025 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-08-29 16:02:03,028 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-08-29 16:02:03,326 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-08-29 16:02:03,326 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-08-29 16:02:03,329 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-08-29 16:02:03,656 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-08-29 16:02:03,656 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-08-29 16:02:03,659 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:02:03,659 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:02:03,659 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:03,664 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-08-29 16:02:03,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:03,675 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-08-29 16:02:03,686 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-08-29 16:02:03,686 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-08-29 16:02:03,686 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-08-29 16:02:03,686 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-08-29 16:02:03,686 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-08-29 16:02:03,691 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-08-29 16:02:03,697 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-08-29 16:02:03,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:02:03,840 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-08-29 16:02:03,847 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-08-29 16:02:03,851 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#168](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-08-29 16:02:03,855 [ scc.config] DEBUG Found github.token 2024-08-29 16:02:03,856 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-08-29 16:02:03,856 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-08-29 16:02:03,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:03,865 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-08-29 16:02:03,876 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-08-29 16:02:03,876 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-08-29 16:02:03,876 [ scc.git] DEBUG Auto-merging setup.py 2024-08-29 16:02:03,876 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-08-29 16:02:03,876 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-08-29 16:02:03,876 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-08-29 16:02:03,876 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-08-29 16:02:03,876 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-08-29 16:02:03,877 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-08-29 16:02:03,881 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-08-29 16:02:03,887 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-08-29 16:02:04,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:02:04,244 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-08-29 16:02:04,250 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-08-29 16:02:04,254 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#168](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-08-29 16:02:04,258 [ scc.config] DEBUG Found github.token 2024-08-29 16:02:04,258 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-08-29 16:02:04,259 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-08-29 16:02:04,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:04,268 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-08-29 16:02:04,278 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-08-29 16:02:04,278 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-08-29 16:02:04,278 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:02:04,281 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-08-29 16:02:04,281 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-08-29 16:02:04,281 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-08-29 16:02:04,281 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-08-29 16:02:04,281 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-08-29 16:02:04,281 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-08-29 16:02:04,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:02:04,635 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:02:04,670 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:02:04,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:04,674 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:02:04,709 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:02:04,714 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92cf262e0> has no local changes 2024-08-29 16:02:04,714 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:02:04,722 [ scc.git] DEBUG [detached HEAD 2e807f4] merge master -Dorg -Ssuccess-only 2024-08-29 16:02:04,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:02:04,722 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:02:05,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-08-29 16:02:05,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583 HTTP/1.1" 200 None 2024-08-29 16:02:06,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583/comments HTTP/1.1" 200 None 2024-08-29 16:02:06,107 [ scc.repo] DEBUG # ... Include label: include 2024-08-29 16:02:06,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47 HTTP/1.1" 200 None 2024-08-29 16:02:07,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:02:07,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:02:07,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47 HTTP/1.1" 200 None 2024-08-29 16:02:08,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b47792851e0427c1d5fc7ba778783b8e09e21f47?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:02:08,399 [ scc.repo] DEBUG - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-08-29 16:02:08,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-08-29 16:02:09,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-08-29 16:02:09,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-08-29 16:02:09,787 [ scc.repo] DEBUG # ... Include label: include 2024-08-29 16:02:10,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8413745cd617bae91755b48eb35ecccc6c6a0acd HTTP/1.1" 200 None 2024-08-29 16:02:10,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8413745cd617bae91755b48eb35ecccc6c6a0acd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:02:11,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8413745cd617bae91755b48eb35ecccc6c6a0acd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:02:11,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8413745cd617bae91755b48eb35ecccc6c6a0acd HTTP/1.1" 200 None 2024-08-29 16:02:12,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8413745cd617bae91755b48eb35ecccc6c6a0acd?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:02:12,102 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-08-29 16:02:12,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-08-29 16:02:13,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-08-29 16:02:13,064 [ scc.repo] DEBUG # ... Include label: include 2024-08-29 16:02:13,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/23f500849315d7f3e9f74fc5b045f62ebbad9966 HTTP/1.1" 200 None 2024-08-29 16:02:14,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/23f500849315d7f3e9f74fc5b045f62ebbad9966/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:02:14,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/23f500849315d7f3e9f74fc5b045f62ebbad9966/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:02:14,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-08-29 16:02:15,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-08-29 16:02:15,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-08-29 16:02:16,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:02:16,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:02:17,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-08-29 16:02:17,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:02:17,650 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-08-29 16:02:18,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560 HTTP/1.1" 200 None 2024-08-29 16:02:18,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560/comments HTTP/1.1" 200 None 2024-08-29 16:02:19,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/996699f155d2df664d08ff1b8b01c8f6305074be HTTP/1.1" 200 None 2024-08-29 16:02:19,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/996699f155d2df664d08ff1b8b01c8f6305074be/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:02:20,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/996699f155d2df664d08ff1b8b01c8f6305074be/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:02:20,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/996699f155d2df664d08ff1b8b01c8f6305074be HTTP/1.1" 200 None 2024-08-29 16:02:20,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/996699f155d2df664d08ff1b8b01c8f6305074be?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:02:20,948 [ scc.repo] DEBUG - PR 560 will-moore 'Max projection bytes' 2024-08-29 16:02:21,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-08-29 16:02:21,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-08-29 16:02:22,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-08-29 16:02:22,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:02:23,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:02:23,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-08-29 16:02:24,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:02:24,188 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-08-29 16:02:24,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-08-29 16:02:25,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549/comments HTTP/1.1" 200 None 2024-08-29 16:02:25,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7743aea3f138896adc46cd02f3a5028f65b105c HTTP/1.1" 200 None 2024-08-29 16:02:25,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7743aea3f138896adc46cd02f3a5028f65b105c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:02:26,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7743aea3f138896adc46cd02f3a5028f65b105c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:02:26,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7743aea3f138896adc46cd02f3a5028f65b105c HTTP/1.1" 200 None 2024-08-29 16:02:27,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c7743aea3f138896adc46cd02f3a5028f65b105c?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:02:27,308 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-08-29 16:02:27,308 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:02:27,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-08-29 16:02:27,308 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:02:27,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:27,314 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:02:27,318 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:02:27,318 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:02:27,324 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:02:27,329 [ scc.git] DEBUG Already up to date. 2024-08-29 16:02:27,329 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-08-29 16:02:27,662 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-08-29 16:02:27,662 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-08-29 16:02:27,666 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-08-29 16:02:27,953 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-08-29 16:02:27,953 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-08-29 16:02:27,957 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head' 2024-08-29 16:02:28,241 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-08-29 16:02:28,241 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD 2024-08-29 16:02:28,244 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-08-29 16:02:28,524 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-08-29 16:02:28,524 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-08-29 16:02:28,528 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-08-29 16:02:28,998 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-08-29 16:02:28,999 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-08-29 16:02:29,001 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head' 2024-08-29 16:02:29,286 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-08-29 16:02:29,286 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD 2024-08-29 16:02:29,290 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:02:29,290 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:02:29,290 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:29,294 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c7743aea3f138896adc46cd02f3a5028f65b105c' 2024-08-29 16:02:29,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:29,306 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) c7743aea3f138896adc46cd02f3a5028f65b105c' 2024-08-29 16:02:29,325 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-08-29 16:02:29,325 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-08-29 16:02:29,325 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-08-29 16:02:29,325 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:02:29,332 [ scc.git] DEBUG src/css/figure.css | 9 ++++ 2024-08-29 16:02:29,332 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-08-29 16:02:29,332 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++ 2024-08-29 16:02:29,332 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-08-29 16:02:29,332 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 ++++++++++++- 2024-08-29 16:02:29,332 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-08-29 16:02:29,332 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-08-29 16:02:29,332 [ scc.git] DEBUG src/js/views/right_panel_view.js | 79 ++++++++++++++++++++++++++++++- 2024-08-29 16:02:29,332 [ scc.git] DEBUG src/js/views/util.js | 54 +++++++++++++++++++++ 2024-08-29 16:02:29,332 [ scc.git] DEBUG src/templates/rois_form.template.html | 89 ++++++++++++++++++++++++++++++++++- 2024-08-29 16:02:29,332 [ scc.git] DEBUG 10 files changed, 365 insertions(+), 6 deletions(-) 2024-08-29 16:02:29,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:02:29,482 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-08-29 16:02:29,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:29,494 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-08-29 16:02:29,514 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-08-29 16:02:29,514 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-08-29 16:02:29,514 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-08-29 16:02:29,514 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-08-29 16:02:29,515 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:02:29,521 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-08-29 16:02:29,521 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-08-29 16:02:29,521 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-08-29 16:02:29,521 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-08-29 16:02:29,521 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-08-29 16:02:29,521 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-08-29 16:02:29,521 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-08-29 16:02:29,521 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-08-29 16:02:29,521 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-08-29 16:02:29,521 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-08-29 16:02:29,521 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-08-29 16:02:29,521 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-08-29 16:02:29,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:02:29,881 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...996699f155d2df664d08ff1b8b01c8f6305074be' 2024-08-29 16:02:29,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:29,893 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (Max projection bytes) 996699f155d2df664d08ff1b8b01c8f6305074be' 2024-08-29 16:02:30,029 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-08-29 16:02:30,029 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-08-29 16:02:30,029 [ scc.git] DEBUG Auto-merging src/index.html 2024-08-29 16:02:30,029 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2024-08-29 16:02:30,029 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-08-29 16:02:30,029 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-08-29 16:02:30,029 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:02:30,036 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 24 +++++++-- 2024-08-29 16:02:30,036 [ scc.git] DEBUG omero_figure/urls.py | 10 +++- 2024-08-29 16:02:30,036 [ scc.git] DEBUG omero_figure/views.py | 58 ++++++++++++++++++++++ 2024-08-29 16:02:30,036 [ scc.git] DEBUG src/css/figure.css | 5 -- 2024-08-29 16:02:30,036 [ scc.git] DEBUG src/index.html | 1 + 2024-08-29 16:02:30,036 [ scc.git] DEBUG src/js/models/figure_model.js | 29 ++++++++++- 2024-08-29 16:02:30,036 [ scc.git] DEBUG src/js/models/panel_model.js | 29 ++++++++++- 2024-08-29 16:02:30,036 [ scc.git] DEBUG src/js/views/info_panel_view.js | 3 +- 2024-08-29 16:02:30,036 [ scc.git] DEBUG src/js/views/modal_views.js | 2 + 2024-08-29 16:02:30,036 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2024-08-29 16:02:30,036 [ scc.git] DEBUG src/js/views/right_panel_view.js | 5 ++ 2024-08-29 16:02:30,036 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 3 +- 2024-08-29 16:02:30,037 [ scc.git] DEBUG src/templates/image_display_options.template.html | 6 ++- 2024-08-29 16:02:30,037 [ scc.git] DEBUG src/templates/info_panel.template.html | 2 + 2024-08-29 16:02:30,037 [ scc.git] DEBUG 14 files changed, 163 insertions(+), 16 deletions(-) 2024-08-29 16:02:30,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:02:30,269 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-08-29 16:02:30,277 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:30,281 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-08-29 16:02:30,296 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:02:30,299 [ scc.git] DEBUG setup.py | 2 +- 2024-08-29 16:02:30,299 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-08-29 16:02:30,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:02:30,650 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8413745cd617bae91755b48eb35ecccc6c6a0acd' 2024-08-29 16:02:30,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:30,662 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) 8413745cd617bae91755b48eb35ecccc6c6a0acd' 2024-08-29 16:02:30,686 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-08-29 16:02:30,686 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-08-29 16:02:30,686 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-08-29 16:02:30,686 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-08-29 16:02:30,686 [ scc.git] DEBUG Auto-merging src/templates/rois_form.template.html 2024-08-29 16:02:30,686 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/rois_form.template.html 2024-08-29 16:02:30,686 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-08-29 16:02:30,687 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-08-29 16:02:30,693 [ scc.git] DEBUG Calling 'git reset --hard e9ef38a63496f3a1ca26df38085012bc095d72a5' 2024-08-29 16:02:30,702 [ scc.git] DEBUG HEAD is now at e9ef38a6 merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 2024-08-29 16:02:31,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:02:31,036 [ scc.git] DEBUG Calling 'git merge-base cbdd365756caa80353d6b3ffd66259efbda098ee 8413745cd617bae91755b48eb35ecccc6c6a0acd' 2024-08-29 16:02:31,042 [ scc.git] DEBUG Calling 'git diff --name-only cbdd365756caa80353d6b3ffd66259efbda098ee..cbdd365756caa80353d6b3ffd66259efbda098ee' 2024-08-29 16:02:31,047 [ scc.git] INFO - PR 578 Rdornier 'Image outline' Conflicting PR. Removed from build [OMERO-plugins-push#168](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/consoleText) for more details. Possible conflicts: - PR #549 will-moore 'Inset feature' - src/templates/rois_form.template.html --conflicts 2024-08-29 16:02:31,051 [ scc.config] DEBUG Found github.token 2024-08-29 16:02:31,051 [ scc.git] DEBUG Adding comment to issue #578. 2024-08-29 16:02:31,740 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 201 1994 2024-08-29 16:02:31,741 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b47792851e0427c1d5fc7ba778783b8e09e21f47' 2024-08-29 16:02:31,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:31,753 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Add Hilo Checkbox for LUT Toggling in Channel Slider View) b47792851e0427c1d5fc7ba778783b8e09e21f47' 2024-08-29 16:02:31,784 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-08-29 16:02:31,784 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:02:31,789 [ scc.git] DEBUG src/js/models/panel_model.js | 10 +++++++++ 2024-08-29 16:02:31,789 [ scc.git] DEBUG src/js/models/undo.js | 3 ++- 2024-08-29 16:02:31,789 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 42 +++++++++++++++++++++++++++++++++--- 2024-08-29 16:02:31,789 [ scc.git] DEBUG src/templates/checkbox_template.html | 4 ++++ 2024-08-29 16:02:31,789 [ scc.git] DEBUG 4 files changed, 55 insertions(+), 4 deletions(-) 2024-08-29 16:02:31,789 [ scc.git] DEBUG create mode 100644 src/templates/checkbox_template.html 2024-08-29 16:02:32,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:02:32,159 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:02:32,195 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:02:32,195 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:32,199 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:02:32,235 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:02:32,243 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c6c2490> has no local changes 2024-08-29 16:02:32,243 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 577 Rdornier 'Fill rois' (status: failure) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' Conflicting PRs (not included): - PR 578 Rdornier 'Image outline' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:02:32,251 [ scc.git] DEBUG [detached HEAD bdec34f4] merge master -Dorg -Ssuccess-only 2024-08-29 16:02:32,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:02:32,252 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:02:32,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-08-29 16:02:33,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-08-29 16:02:33,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-08-29 16:02:33,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-08-29 16:02:34,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:02:34,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-08-29 16:02:35,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:02:35,313 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-08-29 16:02:35,313 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:02:35,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-08-29 16:02:35,313 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:02:35,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:35,317 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:02:35,322 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:02:35,322 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:02:35,327 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:02:35,332 [ scc.git] DEBUG Already up to date. 2024-08-29 16:02:35,332 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-08-29 16:02:35,634 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-08-29 16:02:35,634 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-08-29 16:02:35,638 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:02:35,638 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:02:35,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:35,642 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-08-29 16:02:35,647 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:35,652 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-08-29 16:02:35,660 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-08-29 16:02:35,660 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:02:35,662 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-08-29 16:02:35,662 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-08-29 16:02:35,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:02:35,793 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:02:35,828 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:02:35,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:35,832 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:02:35,867 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:02:35,872 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92cf0beb0> has no local changes 2024-08-29 16:02:35,872 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:02:35,879 [ scc.git] DEBUG [detached HEAD 2b7678a] merge master -Dorg -Ssuccess-only 2024-08-29 16:02:35,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:02:35,880 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:02:36,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-08-29 16:02:36,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-08-29 16:02:36,702 [ scc.repo] DEBUG # ... Include label: dependencies 2024-08-29 16:02:37,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-08-29 16:02:37,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:02:38,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:02:38,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-08-29 16:02:39,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:02:39,234 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-08-29 16:02:39,234 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:02:39,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-08-29 16:02:39,234 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:02:39,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:39,239 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:02:39,243 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:02:39,243 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:02:39,248 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:02:39,253 [ scc.git] DEBUG Already up to date. 2024-08-29 16:02:39,253 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-08-29 16:02:39,584 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-08-29 16:02:39,584 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-08-29 16:02:39,588 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:02:39,588 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:02:39,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:39,592 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-08-29 16:02:39,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:39,601 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-08-29 16:02:39,611 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:02:39,615 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-08-29 16:02:39,615 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-08-29 16:02:39,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:02:39,752 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:02:39,787 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:02:39,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:39,792 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:02:39,826 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:02:39,832 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c6c2f70> has no local changes 2024-08-29 16:02:39,832 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:02:39,841 [ scc.git] DEBUG [detached HEAD ff6be70] merge master -Dorg -Ssuccess-only 2024-08-29 16:02:39,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:02:39,841 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:02:40,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-08-29 16:02:40,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-08-29 16:02:41,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-08-29 16:02:41,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-08-29 16:02:42,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:02:42,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:02:43,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-08-29 16:02:43,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:02:43,636 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-08-29 16:02:44,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-08-29 16:02:44,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-08-29 16:02:44,562 [ scc.repo] DEBUG # ... Include label: dependencies 2024-08-29 16:02:45,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-08-29 16:02:45,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:02:46,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:02:46,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-08-29 16:02:47,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:02:47,161 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-08-29 16:02:47,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-08-29 16:02:47,602 [ scc.repo] DEBUG # ... Include label: dependencies 2024-08-29 16:02:48,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-08-29 16:02:48,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:02:49,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:02:49,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-08-29 16:02:50,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:02:50,076 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-08-29 16:02:50,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-08-29 16:02:50,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-08-29 16:02:51,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-08-29 16:02:51,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:02:52,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:02:52,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-08-29 16:02:53,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:02:53,240 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-08-29 16:02:53,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-08-29 16:02:54,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-08-29 16:02:54,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-08-29 16:02:55,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:02:55,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:02:56,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-08-29 16:02:56,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:02:56,421 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-08-29 16:02:56,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-08-29 16:02:57,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-08-29 16:02:57,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-08-29 16:02:58,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:02:58,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-08-29 16:02:59,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:02:59,111 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-08-29 16:02:59,111 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:02:59,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-08-29 16:02:59,111 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:02:59,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:02:59,117 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:02:59,121 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:02:59,122 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:02:59,126 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:02:59,131 [ scc.git] DEBUG Already up to date. 2024-08-29 16:02:59,132 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-08-29 16:02:59,458 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-08-29 16:02:59,458 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-08-29 16:02:59,462 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-08-29 16:02:59,750 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-08-29 16:02:59,750 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-08-29 16:02:59,754 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-08-29 16:03:00,056 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-08-29 16:03:00,056 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-08-29 16:03:00,059 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-08-29 16:03:00,335 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-08-29 16:03:00,335 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-08-29 16:03:00,339 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-08-29 16:03:00,613 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-08-29 16:03:00,613 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-08-29 16:03:00,617 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-08-29 16:03:00,905 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-08-29 16:03:00,905 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-08-29 16:03:00,908 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:03:00,908 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:00,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:00,913 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-08-29 16:03:00,919 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:00,923 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-08-29 16:03:00,934 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-08-29 16:03:00,935 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:03:00,938 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-08-29 16:03:00,938 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-08-29 16:03:00,938 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-08-29 16:03:01,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:01,071 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-08-29 16:03:01,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:01,081 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-08-29 16:03:01,098 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-08-29 16:03:01,098 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-08-29 16:03:01,098 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-08-29 16:03:01,098 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-08-29 16:03:01,098 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:03:01,102 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-08-29 16:03:01,102 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-08-29 16:03:01,102 [ scc.git] DEBUG src/app/header.html | 5 + 2024-08-29 16:03:01,102 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-08-29 16:03:01,102 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-08-29 16:03:01,102 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-08-29 16:03:01,102 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-08-29 16:03:01,102 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-08-29 16:03:01,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:01,459 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-08-29 16:03:01,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:01,469 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-08-29 16:03:01,480 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-08-29 16:03:01,481 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:03:01,484 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-08-29 16:03:01,484 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-08-29 16:03:01,484 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-08-29 16:03:01,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:01,844 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-08-29 16:03:01,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:01,855 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-08-29 16:03:01,869 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:03:01,877 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-08-29 16:03:01,877 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-08-29 16:03:02,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:02,238 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-08-29 16:03:02,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:02,249 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-08-29 16:03:02,279 [ scc.git] DEBUG Auto-merging package-lock.json 2024-08-29 16:03:02,280 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:03:02,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:02,625 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-08-29 16:03:02,631 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:02,635 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-08-29 16:03:02,649 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-08-29 16:03:02,649 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-08-29 16:03:02,649 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-08-29 16:03:02,649 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:03:02,653 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-08-29 16:03:02,653 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-08-29 16:03:02,653 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-08-29 16:03:02,653 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-08-29 16:03:02,653 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-08-29 16:03:02,653 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-08-29 16:03:02,653 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-08-29 16:03:03,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:03,002 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:03:03,040 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:03,040 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:03,044 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:03:03,079 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:03:03,087 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c6deb80> has no local changes 2024-08-29 16:03:03,087 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:03:03,096 [ scc.git] DEBUG [detached HEAD 7ae472f] merge master -Dorg -Ssuccess-only 2024-08-29 16:03:03,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:03:03,097 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:03:03,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-08-29 16:03:03,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-08-29 16:03:04,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-08-29 16:03:04,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-08-29 16:03:05,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:03:05,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:03:06,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-08-29 16:03:06,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:03:06,647 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-08-29 16:03:06,647 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:03:06,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-08-29 16:03:06,647 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:06,647 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:06,653 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:03:06,657 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:03:06,657 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:03:06,662 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:03:06,667 [ scc.git] DEBUG Already up to date. 2024-08-29 16:03:06,667 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-08-29 16:03:07,000 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-08-29 16:03:07,000 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-08-29 16:03:07,004 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:03:07,004 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:07,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:07,009 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-08-29 16:03:07,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:07,019 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-08-29 16:03:07,028 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:03:07,030 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-08-29 16:03:07,030 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-08-29 16:03:07,030 [ scc.git] DEBUG requirements.txt | 2 +- 2024-08-29 16:03:07,030 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-08-29 16:03:07,030 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-08-29 16:03:07,030 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-08-29 16:03:07,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:07,160 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:03:07,196 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:07,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:07,201 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:03:07,236 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:03:07,242 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c685730> has no local changes 2024-08-29 16:03:07,242 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:03:07,250 [ scc.git] DEBUG [detached HEAD f759633] merge master -Dorg -Ssuccess-only 2024-08-29 16:03:07,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:03:07,250 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:03:07,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-08-29 16:03:08,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-08-29 16:03:08,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-08-29 16:03:09,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:03:09,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-08-29 16:03:09,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:03:09,998 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-08-29 16:03:10,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-08-29 16:03:11,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-08-29 16:03:11,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-08-29 16:03:12,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:03:12,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-08-29 16:03:12,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:03:12,861 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-08-29 16:03:13,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-08-29 16:03:13,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-08-29 16:03:14,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-08-29 16:03:14,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:03:15,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-08-29 16:03:15,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:03:15,879 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-08-29 16:03:15,879 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:03:15,879 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-08-29 16:03:15,879 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:15,879 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:15,885 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:03:15,889 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:03:15,890 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:03:15,895 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:03:15,899 [ scc.git] DEBUG Already up to date. 2024-08-29 16:03:15,900 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-08-29 16:03:16,223 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-08-29 16:03:16,223 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-08-29 16:03:16,227 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-08-29 16:03:16,501 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-08-29 16:03:16,501 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-08-29 16:03:16,505 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-08-29 16:03:16,786 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-08-29 16:03:16,786 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-08-29 16:03:16,790 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:03:16,790 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:16,790 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:16,795 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-08-29 16:03:16,801 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:16,805 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-08-29 16:03:16,819 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-08-29 16:03:16,819 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-08-29 16:03:16,819 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-08-29 16:03:16,819 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-08-29 16:03:16,819 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-08-29 16:03:16,819 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-08-29 16:03:16,824 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-08-29 16:03:16,830 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-08-29 16:03:16,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:16,969 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-08-29 16:03:16,975 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-08-29 16:03:16,980 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#168](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-08-29 16:03:16,984 [ scc.config] DEBUG Found github.token 2024-08-29 16:03:16,984 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-08-29 16:03:16,984 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-08-29 16:03:16,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:16,995 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-08-29 16:03:17,009 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-08-29 16:03:17,009 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-08-29 16:03:17,009 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-08-29 16:03:17,010 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-08-29 16:03:17,010 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-08-29 16:03:17,015 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-08-29 16:03:17,021 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-08-29 16:03:17,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:17,368 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-08-29 16:03:17,374 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-08-29 16:03:17,379 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#168](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-08-29 16:03:17,383 [ scc.config] DEBUG Found github.token 2024-08-29 16:03:17,383 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-08-29 16:03:17,383 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-08-29 16:03:17,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:17,393 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-08-29 16:03:17,402 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:03:17,404 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-08-29 16:03:17,404 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-08-29 16:03:17,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:17,804 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:03:17,841 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:17,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:17,845 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:03:17,880 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:03:17,886 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c685550> has no local changes 2024-08-29 16:03:17,886 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:03:17,894 [ scc.git] DEBUG [detached HEAD 38b7ad6] merge master -Dorg -Ssuccess-only 2024-08-29 16:03:17,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:03:17,894 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:03:18,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-08-29 16:03:18,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-08-29 16:03:18,860 [ scc.repo] DEBUG # ... Include label: dependencies 2024-08-29 16:03:19,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-08-29 16:03:20,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:03:20,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:03:21,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-08-29 16:03:21,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:03:21,541 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-08-29 16:03:21,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-08-29 16:03:22,001 [ scc.repo] DEBUG # ... Include label: dependencies 2024-08-29 16:03:22,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-08-29 16:03:23,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:03:23,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:03:24,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-08-29 16:03:24,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:03:24,426 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-08-29 16:03:24,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-08-29 16:03:24,892 [ scc.repo] DEBUG # ... Include label: dependencies 2024-08-29 16:03:25,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-08-29 16:03:26,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:03:26,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-08-29 16:03:26,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-08-29 16:03:27,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:03:27,364 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-08-29 16:03:27,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-08-29 16:03:28,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-08-29 16:03:28,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-08-29 16:03:29,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-08-29 16:03:29,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-08-29 16:03:30,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-08-29 16:03:30,179 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:03:30,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-08-29 16:03:30,179 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:30,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:30,185 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:03:30,189 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:03:30,189 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:03:30,194 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:03:30,199 [ scc.git] DEBUG Already up to date. 2024-08-29 16:03:30,199 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-08-29 16:03:30,548 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-08-29 16:03:30,549 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-08-29 16:03:30,552 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-08-29 16:03:30,838 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-08-29 16:03:30,838 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-08-29 16:03:30,843 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-08-29 16:03:31,128 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-08-29 16:03:31,129 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-08-29 16:03:31,132 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:03:31,132 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:31,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:31,137 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-08-29 16:03:31,142 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:31,146 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-08-29 16:03:31,155 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:03:31,157 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-08-29 16:03:31,157 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-08-29 16:03:31,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:31,315 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-08-29 16:03:31,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:31,324 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-08-29 16:03:31,335 [ scc.git] DEBUG Auto-merging package-lock.json 2024-08-29 16:03:31,336 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:03:31,338 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-08-29 16:03:31,338 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-08-29 16:03:31,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:31,695 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-08-29 16:03:31,701 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:31,705 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-08-29 16:03:31,715 [ scc.git] DEBUG Auto-merging package-lock.json 2024-08-29 16:03:31,716 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:03:31,719 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-08-29 16:03:31,719 [ scc.git] DEBUG package.json | 2 +- 2024-08-29 16:03:31,719 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-08-29 16:03:32,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:32,123 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:03:32,159 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:32,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:32,163 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:03:32,200 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:03:32,206 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c6d6c40> has no local changes 2024-08-29 16:03:32,206 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:03:32,214 [ scc.git] DEBUG [detached HEAD 4cb2818] merge master -Dorg -Ssuccess-only 2024-08-29 16:03:32,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:03:32,214 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:03:32,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-08-29 16:03:33,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-08-29 16:03:33,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-08-29 16:03:34,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:03:34,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-08-29 16:03:34,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:03:34,903 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-08-29 16:03:34,903 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:03:34,903 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-08-29 16:03:34,903 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:34,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:34,909 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:03:34,914 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:03:34,914 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:03:34,919 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:03:34,924 [ scc.git] DEBUG Already up to date. 2024-08-29 16:03:34,924 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-08-29 16:03:35,216 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-08-29 16:03:35,216 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-08-29 16:03:35,220 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:03:35,220 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:35,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:35,226 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-08-29 16:03:35,231 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:35,235 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-08-29 16:03:35,243 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:03:35,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:35,384 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:03:35,420 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:35,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:35,425 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:03:35,460 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:03:35,465 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c63c9d0> has no local changes 2024-08-29 16:03:35,465 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:03:35,472 [ scc.git] DEBUG [detached HEAD e2e2648] merge master -Dorg -Ssuccess-only 2024-08-29 16:03:35,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:03:35,473 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:03:35,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-08-29 16:03:36,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-08-29 16:03:36,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-08-29 16:03:37,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-08-29 16:03:37,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-08-29 16:03:38,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:03:38,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-08-29 16:03:39,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:03:39,003 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-08-29 16:03:39,003 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:03:39,003 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-08-29 16:03:39,003 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:39,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:39,009 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:03:39,013 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:03:39,014 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:03:39,018 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:03:39,023 [ scc.git] DEBUG Already up to date. 2024-08-29 16:03:39,023 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-08-29 16:03:39,321 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-08-29 16:03:39,321 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-08-29 16:03:39,325 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:03:39,325 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:39,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:39,331 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-08-29 16:03:39,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:39,341 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-08-29 16:03:39,349 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-08-29 16:03:39,350 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:03:39,352 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-08-29 16:03:39,352 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-08-29 16:03:39,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:39,503 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:03:39,538 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:39,539 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:39,543 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:03:39,577 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:03:39,582 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c696bb0> has no local changes 2024-08-29 16:03:39,582 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:03:39,590 [ scc.git] DEBUG [detached HEAD a675b6b] merge master -Dorg -Ssuccess-only 2024-08-29 16:03:39,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:03:39,590 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:03:39,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-08-29 16:03:40,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-08-29 16:03:40,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-08-29 16:03:41,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-08-29 16:03:41,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:03:42,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-08-29 16:03:42,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:03:42,731 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-08-29 16:03:42,731 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:03:42,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-08-29 16:03:42,731 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:42,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:42,737 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:03:42,741 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:03:42,742 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:03:42,747 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:03:42,751 [ scc.git] DEBUG Already up to date. 2024-08-29 16:03:42,752 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-08-29 16:03:43,053 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-08-29 16:03:43,053 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-08-29 16:03:43,057 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:03:43,057 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:43,057 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:43,062 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-08-29 16:03:43,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:43,072 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-08-29 16:03:43,081 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-08-29 16:03:43,081 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-08-29 16:03:43,081 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-08-29 16:03:43,081 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-08-29 16:03:43,081 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-08-29 16:03:43,081 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-08-29 16:03:43,081 [ scc.git] DEBUG Auto-merging setup.py 2024-08-29 16:03:43,081 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-08-29 16:03:43,082 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-08-29 16:03:43,082 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-08-29 16:03:43,086 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-08-29 16:03:43,092 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-08-29 16:03:43,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:43,252 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-08-29 16:03:43,258 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-08-29 16:03:43,262 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#168](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/consoleText) for more details. Possible conflicts: - Upstream changes - setup.py - omero_signup/signup_settings.py - omero_signup/views.py - omero_signup/urls.py --conflicts 2024-08-29 16:03:43,267 [ scc.config] DEBUG Found github.token 2024-08-29 16:03:43,267 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-08-29 16:03:43,267 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:03:43,302 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:43,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:43,307 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:03:43,342 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:03:43,348 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c64e460> has no local changes 2024-08-29 16:03:43,348 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:03:43,355 [ scc.git] DEBUG [detached HEAD ace1d66] merge master -Dorg -Ssuccess-only 2024-08-29 16:03:43,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:03:43,356 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:03:43,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-08-29 16:03:44,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-08-29 16:03:44,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-08-29 16:03:45,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-08-29 16:03:45,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:03:46,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-08-29 16:03:46,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:03:46,556 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-08-29 16:03:46,556 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:03:46,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-08-29 16:03:46,556 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:46,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:46,562 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:03:46,567 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:03:46,567 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:03:46,573 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:03:46,578 [ scc.git] DEBUG Already up to date. 2024-08-29 16:03:46,578 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-08-29 16:03:46,878 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-08-29 16:03:46,878 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-08-29 16:03:46,881 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:03:46,881 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:46,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:46,887 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-08-29 16:03:46,894 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:46,898 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-08-29 16:03:46,911 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-08-29 16:03:46,914 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-08-29 16:03:46,914 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-08-29 16:03:46,914 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-08-29 16:03:46,914 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-08-29 16:03:46,914 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-08-29 16:03:46,914 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-08-29 16:03:46,914 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-08-29 16:03:46,914 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-08-29 16:03:46,914 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-08-29 16:03:46,914 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-08-29 16:03:46,916 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-08-29 16:03:46,916 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-08-29 16:03:46,916 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-08-29 16:03:46,917 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-08-29 16:03:46,917 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-08-29 16:03:46,917 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-08-29 16:03:46,917 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-08-29 16:03:46,917 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-08-29 16:03:46,917 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-08-29 16:03:46,917 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-08-29 16:03:46,917 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-08-29 16:03:46,917 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-08-29 16:03:46,917 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-08-29 16:03:46,917 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-08-29 16:03:47,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:47,084 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:03:47,122 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:47,122 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:47,127 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:03:47,162 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:03:47,168 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c5f5880> has no local changes 2024-08-29 16:03:47,168 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:03:47,175 [ scc.git] DEBUG [detached HEAD 94501cc] merge master -Dorg -Ssuccess-only 2024-08-29 16:03:47,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:03:47,176 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:03:47,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-08-29 16:03:47,512 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:03:47,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-08-29 16:03:47,512 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:47,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:47,517 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:03:47,521 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:03:47,521 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:03:47,526 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:03:47,531 [ scc.git] DEBUG Already up to date. 2024-08-29 16:03:47,531 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:03:47,531 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:47,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:47,536 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:03:47,571 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:47,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:47,576 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:03:47,610 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:03:47,616 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c649f10> has no local changes 2024-08-29 16:03:47,616 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:03:47,623 [ scc.git] DEBUG [detached HEAD 8a7428f] merge master -Dorg -Ssuccess-only 2024-08-29 16:03:47,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:03:47,623 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:03:47,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-08-29 16:03:47,944 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:03:47,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-08-29 16:03:47,944 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:47,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:47,949 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:03:47,953 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:03:47,953 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:03:47,958 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:03:47,963 [ scc.git] DEBUG Already up to date. 2024-08-29 16:03:47,963 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:03:47,963 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:47,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:47,967 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:03:48,003 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:48,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:48,008 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:03:48,042 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:03:48,048 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c5f56a0> has no local changes 2024-08-29 16:03:48,048 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:03:48,055 [ scc.git] DEBUG [detached HEAD d48e973] merge master -Dorg -Ssuccess-only 2024-08-29 16:03:48,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:03:48,056 [ scc.git] INFO Overriding base-branch from master to main 2024-08-29 16:03:48,056 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:03:48,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-08-29 16:03:48,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-08-29 16:03:49,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-08-29 16:03:49,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-08-29 16:03:50,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-08-29 16:03:50,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:03:51,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-08-29 16:03:51,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:03:51,585 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-08-29 16:03:51,585 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:03:51,585 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-08-29 16:03:51,585 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:51,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:51,591 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-08-29 16:03:51,595 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:03:51,595 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-08-29 16:03:51,600 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-08-29 16:03:51,605 [ scc.git] DEBUG Already up to date. 2024-08-29 16:03:51,605 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-08-29 16:03:51,905 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-08-29 16:03:51,905 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-08-29 16:03:51,909 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:03:51,909 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:51,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:51,915 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-08-29 16:03:51,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:51,924 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-08-29 16:03:51,933 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-08-29 16:03:51,933 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-08-29 16:03:51,933 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-08-29 16:03:51,933 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-08-29 16:03:51,938 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-08-29 16:03:51,943 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-08-29 16:03:52,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:52,092 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-08-29 16:03:52,097 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-08-29 16:03:52,101 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#168](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-08-29 16:03:52,106 [ scc.config] DEBUG Found github.token 2024-08-29 16:03:52,106 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-08-29 16:03:52,106 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:03:52,142 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:52,142 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:52,146 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:03:52,182 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:03:52,187 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c626670> has no local changes 2024-08-29 16:03:52,187 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:03:52,194 [ scc.git] DEBUG [detached HEAD dbfadb5] merge master -Dorg -Ssuccess-only 2024-08-29 16:03:52,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:03:52,195 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:03:52,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-08-29 16:03:52,510 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:03:52,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-08-29 16:03:52,510 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:52,510 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:52,514 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:03:52,519 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:03:52,519 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:03:52,524 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:03:52,528 [ scc.git] DEBUG Already up to date. 2024-08-29 16:03:52,529 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:03:52,529 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:52,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:52,533 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:03:52,568 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:52,568 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:52,573 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:03:52,607 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:03:52,612 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c616e80> has no local changes 2024-08-29 16:03:52,612 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:03:52,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:03:52,620 [ scc.git] DEBUG [detached HEAD 6977b48] merge master -Dorg -Ssuccess-only 2024-08-29 16:03:52,620 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:03:52,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-08-29 16:03:52,938 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:03:52,938 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-08-29 16:03:52,939 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:52,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:52,944 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:03:52,948 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:03:52,949 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:03:52,953 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:03:52,958 [ scc.git] DEBUG Already up to date. 2024-08-29 16:03:52,959 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:03:52,959 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:52,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:52,963 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:03:52,999 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:52,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:53,004 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:03:53,040 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:03:53,045 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c5cc640> has no local changes 2024-08-29 16:03:53,045 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:03:53,053 [ scc.git] DEBUG [detached HEAD c71dc1d] merge master -Dorg -Ssuccess-only 2024-08-29 16:03:53,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:03:53,053 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:03:53,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-08-29 16:03:53,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-08-29 16:03:54,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-08-29 16:03:54,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-08-29 16:03:55,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:03:55,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-08-29 16:03:56,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:03:56,115 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-08-29 16:03:56,115 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:03:56,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-08-29 16:03:56,116 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:56,116 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:56,121 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-08-29 16:03:56,126 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:03:56,126 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-08-29 16:03:56,131 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-08-29 16:03:56,136 [ scc.git] DEBUG Already up to date. 2024-08-29 16:03:56,136 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-08-29 16:03:56,424 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-08-29 16:03:56,424 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-08-29 16:03:56,428 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:03:56,428 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:56,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:56,432 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-08-29 16:03:56,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:56,442 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-08-29 16:03:56,451 [ scc.git] DEBUG Auto-merging Dockerfile 2024-08-29 16:03:56,451 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-08-29 16:03:56,451 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-08-29 16:03:56,452 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-08-29 16:03:56,456 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-08-29 16:03:56,463 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-08-29 16:03:56,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:03:56,618 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-08-29 16:03:56,623 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-08-29 16:03:56,628 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#168](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-08-29 16:03:56,632 [ scc.config] DEBUG Found github.token 2024-08-29 16:03:56,632 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-08-29 16:03:56,632 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:03:56,668 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:03:56,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:03:56,673 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:03:56,708 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:03:56,714 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c5ddd90> has no local changes 2024-08-29 16:03:56,714 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:03:56,722 [ scc.git] DEBUG [detached HEAD 20e4e05] merge master -Dorg -Ssuccess-only 2024-08-29 16:03:56,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:03:56,722 [ scc.git] INFO Overriding base-branch from master to develop 2024-08-29 16:03:56,722 [ scc.repo] DEBUG ## PRs found: 2024-08-29 16:03:57,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-08-29 16:03:57,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-08-29 16:03:58,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-08-29 16:03:58,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-08-29 16:03:59,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-08-29 16:03:59,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-08-29 16:04:00,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-08-29 16:04:00,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-08-29 16:04:01,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-08-29 16:04:01,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-08-29 16:04:01,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-08-29 16:04:01,976 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-08-29 16:04:02,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-08-29 16:04:02,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-08-29 16:04:03,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-08-29 16:04:03,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-08-29 16:04:03,965 [ scc.repo] DEBUG ## Branches found: 2024-08-29 16:04:03,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-08-29 16:04:03,965 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:04:03,965 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:04:03,970 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-08-29 16:04:03,975 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-08-29 16:04:03,975 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-08-29 16:04:03,980 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-08-29 16:04:03,985 [ scc.git] DEBUG Already up to date. 2024-08-29 16:04:03,985 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-08-29 16:04:04,298 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-08-29 16:04:04,298 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-08-29 16:04:04,302 [ scc.git] DEBUG ## Unique users: [] 2024-08-29 16:04:04,302 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:04:04,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:04:04,307 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-08-29 16:04:04,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:04:04,318 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-08-29 16:04:04,327 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-08-29 16:04:04,328 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-08-29 16:04:04,328 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-08-29 16:04:04,328 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-08-29 16:04:04,333 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-08-29 16:04:04,338 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-08-29 16:04:04,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:04,481 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-08-29 16:04:04,487 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-08-29 16:04:04,492 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#168](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-08-29 16:04:04,496 [ scc.config] DEBUG Found github.token 2024-08-29 16:04:04,497 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-08-29 16:04:04,497 [ scc.git] DEBUG Calling 'git submodule update' 2024-08-29 16:04:04,532 [ scc.git] DEBUG Get sha1 of %s 2024-08-29 16:04:04,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-08-29 16:04:04,537 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:04:04,571 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:04:04,576 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92c617e20> has no local changes 2024-08-29 16:04:04,576 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:04:04,584 [ scc.git] DEBUG [detached HEAD ea107f7] merge master -Dorg -Ssuccess-only 2024-08-29 16:04:04,584 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:04,585 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-08-29 16:04:04,653 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-08-29 16:04:04,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:04,877 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-08-29 16:04:04,881 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-08-29 16:04:05,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:05,264 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-08-29 16:04:05,268 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-08-29 16:04:05,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:05,704 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-08-29 16:04:05,709 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-08-29 16:04:06,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:06,103 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-08-29 16:04:06,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:06,496 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-08-29 16:04:06,500 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-08-29 16:04:06,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:06,885 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-08-29 16:04:06,889 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-08-29 16:04:07,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:07,275 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-08-29 16:04:07,279 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-08-29 16:04:07,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:07,665 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-08-29 16:04:07,669 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-08-29 16:04:08,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:08,045 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-08-29 16:04:08,049 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-08-29 16:04:08,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:08,429 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-08-29 16:04:08,433 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-08-29 16:04:08,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:08,816 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-08-29 16:04:08,820 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-08-29 16:04:09,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:09,207 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-08-29 16:04:09,211 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-08-29 16:04:09,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:09,619 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-08-29 16:04:10,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:10,014 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-08-29 16:04:10,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:10,396 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-08-29 16:04:10,400 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-08-29 16:04:10,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:10,791 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-08-29 16:04:11,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:11,173 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-08-29 16:04:11,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:11,569 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-08-29 16:04:11,573 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-08-29 16:04:11,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:11,964 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-08-29 16:04:11,969 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-08-29 16:04:12,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:12,403 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-08-29 16:04:12,407 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-08-29 16:04:12,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:12,782 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-08-29 16:04:12,786 [ scc.config] DEBUG Found submodule.scripts.url 2024-08-29 16:04:13,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-08-29 16:04:13,176 [ scc.config] DEBUG Found submodule.scripts.branch 2024-08-29 16:04:13,176 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-08-29 16:04:13,250 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa92e02e760> has local changes 2024-08-29 16:04:13,250 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 387 dependabot[bot] 'Bump omero-figure from `47f4948` to `cbdd365`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 577 Rdornier 'Fill rois' (status: failure) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' Conflicting PRs (not included): - PR 578 Rdornier 'Image outline' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/168/)' 2024-08-29 16:04:13,263 [ scc.git] DEBUG [detached HEAD 8655fca] merge master -Dorg -Ssuccess-only 2024-08-29 16:04:13,263 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-08-29 16:04:13,263 [ scc.merge] INFO Repository: ome/omero-plugins 2024-08-29 16:04:13,263 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,263 [ scc.merge] INFO 2024-08-29 16:04:13,263 [ scc.merge] INFO Merged PRs: 2024-08-29 16:04:13,263 [ scc.merge] INFO - PR 387 dependabot[bot] 'Bump omero-figure from `47f4948` to `cbdd365`' 2024-08-29 16:04:13,263 [ scc.merge] INFO 2024-08-29 16:04:13,263 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-08-29 16:04:13,263 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,263 [ scc.merge] INFO 2024-08-29 16:04:13,263 [ scc.merge] INFO Merged PRs: 2024-08-29 16:04:13,263 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-08-29 16:04:13,263 [ scc.merge] INFO 2024-08-29 16:04:13,263 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-08-29 16:04:13,263 [ scc.merge] INFO Excluded PRs: 2024-08-29 16:04:13,263 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-08-29 16:04:13,263 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,263 [ scc.merge] INFO 2024-08-29 16:04:13,263 [ scc.merge] INFO Merged PRs: 2024-08-29 16:04:13,263 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-08-29 16:04:13,263 [ scc.merge] INFO 2024-08-29 16:04:13,264 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-08-29 16:04:13,264 [ scc.merge] INFO Excluded PRs: 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-08-29 16:04:13,264 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,264 [ scc.merge] INFO 2024-08-29 16:04:13,264 [ scc.merge] INFO Merged PRs: 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-08-29 16:04:13,264 [ scc.merge] INFO 2024-08-29 16:04:13,264 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-08-29 16:04:13,264 [ scc.merge] INFO Excluded PRs: 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-08-29 16:04:13,264 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,264 [ scc.merge] INFO 2024-08-29 16:04:13,264 [ scc.merge] INFO Merged PRs: 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-08-29 16:04:13,264 [ scc.merge] INFO 2024-08-29 16:04:13,264 [ scc.merge] INFO Conflicting PRs (not included): 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-08-29 16:04:13,264 [ scc.merge] INFO 2024-08-29 16:04:13,264 [ scc.merge] INFO Repository: ome/omero-figure 2024-08-29 16:04:13,264 [ scc.merge] INFO Excluded PRs: 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' (status: failure) 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-08-29 16:04:13,264 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,264 [ scc.merge] INFO 2024-08-29 16:04:13,264 [ scc.merge] INFO Merged PRs: 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-08-29 16:04:13,264 [ scc.merge] INFO 2024-08-29 16:04:13,264 [ scc.merge] INFO Conflicting PRs (not included): 2024-08-29 16:04:13,264 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-08-29 16:04:13,265 [ scc.merge] INFO 2024-08-29 16:04:13,265 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-08-29 16:04:13,265 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,265 [ scc.merge] INFO 2024-08-29 16:04:13,265 [ scc.merge] INFO Merged PRs: 2024-08-29 16:04:13,265 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-08-29 16:04:13,265 [ scc.merge] INFO 2024-08-29 16:04:13,265 [ scc.merge] INFO Repository: ome/omero-gallery 2024-08-29 16:04:13,265 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,265 [ scc.merge] INFO 2024-08-29 16:04:13,265 [ scc.merge] INFO Merged PRs: 2024-08-29 16:04:13,265 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-08-29 16:04:13,265 [ scc.merge] INFO 2024-08-29 16:04:13,265 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-08-29 16:04:13,265 [ scc.merge] INFO Excluded PRs: 2024-08-29 16:04:13,265 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-08-29 16:04:13,265 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-08-29 16:04:13,265 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-08-29 16:04:13,265 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,265 [ scc.merge] INFO 2024-08-29 16:04:13,265 [ scc.merge] INFO Merged PRs: 2024-08-29 16:04:13,265 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-08-29 16:04:13,265 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-08-29 16:04:13,265 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-08-29 16:04:13,265 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-08-29 16:04:13,265 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-08-29 16:04:13,265 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-08-29 16:04:13,265 [ scc.merge] INFO 2024-08-29 16:04:13,265 [ scc.merge] INFO Repository: ome/omero-mapr 2024-08-29 16:04:13,265 [ scc.merge] INFO Excluded PRs: 2024-08-29 16:04:13,265 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-08-29 16:04:13,265 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,265 [ scc.merge] INFO 2024-08-29 16:04:13,265 [ scc.merge] INFO Merged PRs: 2024-08-29 16:04:13,265 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-08-29 16:04:13,265 [ scc.merge] INFO 2024-08-29 16:04:13,265 [ scc.merge] INFO Repository: ome/omero-metadata 2024-08-29 16:04:13,265 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,265 [ scc.merge] INFO 2024-08-29 16:04:13,266 [ scc.merge] INFO Merged PRs: 2024-08-29 16:04:13,266 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-08-29 16:04:13,266 [ scc.merge] INFO 2024-08-29 16:04:13,266 [ scc.merge] INFO Conflicting PRs (not included): 2024-08-29 16:04:13,266 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-08-29 16:04:13,266 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-08-29 16:04:13,266 [ scc.merge] INFO 2024-08-29 16:04:13,266 [ scc.merge] INFO Repository: ome/omero-parade 2024-08-29 16:04:13,266 [ scc.merge] INFO Excluded PRs: 2024-08-29 16:04:13,266 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-08-29 16:04:13,266 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-08-29 16:04:13,266 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-08-29 16:04:13,266 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,266 [ scc.merge] INFO 2024-08-29 16:04:13,266 [ scc.merge] INFO Merged PRs: 2024-08-29 16:04:13,266 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-08-29 16:04:13,266 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-08-29 16:04:13,266 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-08-29 16:04:13,266 [ scc.merge] INFO 2024-08-29 16:04:13,266 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-08-29 16:04:13,266 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,266 [ scc.merge] INFO 2024-08-29 16:04:13,266 [ scc.merge] INFO Merged PRs: 2024-08-29 16:04:13,266 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-08-29 16:04:13,266 [ scc.merge] INFO 2024-08-29 16:04:13,266 [ scc.merge] INFO Repository: ome/omero-rois 2024-08-29 16:04:13,266 [ scc.merge] INFO Excluded PRs: 2024-08-29 16:04:13,266 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-08-29 16:04:13,266 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,266 [ scc.merge] INFO 2024-08-29 16:04:13,266 [ scc.merge] INFO Merged PRs: 2024-08-29 16:04:13,266 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-08-29 16:04:13,266 [ scc.merge] INFO 2024-08-29 16:04:13,266 [ scc.merge] INFO Repository: ome/omero-signup 2024-08-29 16:04:13,266 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,266 [ scc.merge] INFO 2024-08-29 16:04:13,266 [ scc.merge] INFO Conflicting PRs (not included): 2024-08-29 16:04:13,266 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-08-29 16:04:13,266 [ scc.merge] INFO 2024-08-29 16:04:13,266 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-08-29 16:04:13,267 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,267 [ scc.merge] INFO 2024-08-29 16:04:13,267 [ scc.merge] INFO Merged PRs: 2024-08-29 16:04:13,267 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-08-29 16:04:13,267 [ scc.merge] INFO 2024-08-29 16:04:13,267 [ scc.merge] INFO Repository: ome/omero-upload 2024-08-29 16:04:13,267 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,267 [ scc.merge] INFO 2024-08-29 16:04:13,267 [ scc.merge] INFO 2024-08-29 16:04:13,267 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-08-29 16:04:13,267 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,267 [ scc.merge] INFO 2024-08-29 16:04:13,267 [ scc.merge] INFO 2024-08-29 16:04:13,267 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-08-29 16:04:13,267 [ scc.merge] INFO Excluded PRs: 2024-08-29 16:04:13,267 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-08-29 16:04:13,267 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,267 [ scc.merge] INFO 2024-08-29 16:04:13,267 [ scc.merge] INFO Conflicting PRs (not included): 2024-08-29 16:04:13,267 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-08-29 16:04:13,267 [ scc.merge] INFO 2024-08-29 16:04:13,267 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-08-29 16:04:13,267 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,267 [ scc.merge] INFO 2024-08-29 16:04:13,267 [ scc.merge] INFO 2024-08-29 16:04:13,267 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-08-29 16:04:13,267 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,267 [ scc.merge] INFO 2024-08-29 16:04:13,267 [ scc.merge] INFO 2024-08-29 16:04:13,267 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-08-29 16:04:13,267 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,267 [ scc.merge] INFO 2024-08-29 16:04:13,267 [ scc.merge] INFO Conflicting PRs (not included): 2024-08-29 16:04:13,267 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-08-29 16:04:13,267 [ scc.merge] INFO 2024-08-29 16:04:13,267 [ scc.merge] INFO Repository: ome/scripts 2024-08-29 16:04:13,267 [ scc.merge] INFO Excluded PRs: 2024-08-29 16:04:13,267 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-08-29 16:04:13,267 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-08-29 16:04:13,268 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-08-29 16:04:13,268 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-08-29 16:04:13,268 [ scc.merge] INFO Already up to date. 2024-08-29 16:04:13,268 [ scc.merge] INFO 2024-08-29 16:04:13,268 [ scc.merge] INFO Conflicting PRs (not included): 2024-08-29 16:04:13,268 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-08-29 16:04:13,268 [ scc.merge] INFO 2024-08-29 16:04:13,268 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-08-29 16:04:13,268 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,272 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-08-29 16:04:13,272 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,276 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-08-29 16:04:13,277 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-08-29 16:04:13,281 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-08-29 16:04:13,286 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-08-29 16:04:13,290 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-08-29 16:04:13,295 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-08-29 16:04:13,299 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-08-29 16:04:13,304 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-08-29 16:04:13,309 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-08-29 16:04:13,313 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-08-29 16:04:13,318 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-08-29 16:04:13,322 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-08-29 16:04:13,327 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-08-29 16:04:13,331 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-08-29 16:04:13,336 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,340 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,340 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-08-29 16:04:13,341 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-08-29 16:04:13,345 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-08-29 16:04:13,349 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-08-29 16:04:13,354 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-08-29 16:04:13,358 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-08-29 16:04:13,363 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,367 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-08-29 16:04:13,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-08-29 16:04:13,368 [ scc.git] DEBUG Calling 'git remote' 2024-08-29 16:04:13,372 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.3-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 96f7c65] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from cbdd3657 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 10468b7] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-08-29 16:04:56,464 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-08-29 16:05:05,504 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-08-29 16:05:07,866 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-08-29 16:05:12,435 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-08-29 16:05:52,683 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS