Started by upstream project "Trigger" build number 193 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 1f37dba8ad79dad8a2455842a213ac50b6987233 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 1f37dba8ad79dad8a2455842a213ac50b6987233 # timeout=10 Commit message: "Merge pull request #386 from ome/dependabot/submodules/omero-figure-47f4948" > git rev-list --no-walk 1f37dba8ad79dad8a2455842a213ac50b6987233 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 169 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.8-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (444 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.8-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.0 charset-normalizer-3.3.2 cryptography-43.0.0 future-1.0.0 idna-3.8 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-09-02 00:41:26,734 [ scc.config] DEBUG Found github.token 2024-09-02 00:41:26,736 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-02 00:41:26,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:41:27,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:41:27,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-02 00:41:27,709 [ scc.gh] DEBUG 4839 remaining from 5000 (Reset at 01:09 2024-09-02 00:41:27,710 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:41:27,715 [ scc.git] DEBUG Check current status 2024-09-02 00:41:27,715 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:41:27,721 [ scc.git] DEBUG 1f37dba Merge pull request #386 from ome/dependabot/submodules/omero-figure-47f4948 2024-09-02 00:41:27,722 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:41:27,777 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-02 00:41:27,780 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-02 00:41:27,784 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-02 00:41:27,797 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-02 00:41:28,450 [ scc.git] DEBUG 47f494861cc4a09399833c3f8a63b8399a735e52 omero-figure (v7.0.0-28-g47f49486) 2024-09-02 00:41:28,453 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-02 00:41:28,456 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-02 00:41:28,460 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-02 00:41:28,463 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-02 00:41:28,466 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-02 00:41:28,468 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-02 00:41:28,471 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-02 00:41:28,474 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-02 00:41:28,477 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-02 00:41:28,480 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-02 00:41:28,483 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-02 00:41:28,486 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-02 00:41:28,488 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-02 00:41:28,491 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-02 00:41:28,493 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-02 00:41:28,496 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-02 00:41:28,502 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-02 00:41:28,507 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:41:28,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-02 00:41:29,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:41:29,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:41:29,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:41:30,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:41:30,393 [ scc.git] DEBUG Resetting... 2024-09-02 00:41:30,393 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-02 00:41:30,402 [ scc.git] DEBUG HEAD is now at 1f37dba Merge pull request #386 from ome/dependabot/submodules/omero-figure-47f4948 2024-09-02 00:41:30,402 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-02 00:41:30,508 [ scc.git] DEBUG Check current status 2024-09-02 00:41:30,509 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:41:30,514 [ scc.git] DEBUG 1f37dba Merge pull request #386 from ome/dependabot/submodules/omero-figure-47f4948 2024-09-02 00:41:30,514 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:41:30,567 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-02 00:41:30,570 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-02 00:41:30,573 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-02 00:41:30,576 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-02 00:41:30,584 [ scc.git] DEBUG 47f494861cc4a09399833c3f8a63b8399a735e52 omero-figure (v7.0.0-28-g47f49486) 2024-09-02 00:41:30,587 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-02 00:41:30,591 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-02 00:41:30,594 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-02 00:41:30,598 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-02 00:41:30,601 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-02 00:41:30,604 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-02 00:41:30,607 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-02 00:41:30,611 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-02 00:41:30,615 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-02 00:41:30,619 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-02 00:41:30,621 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-02 00:41:30,624 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-02 00:41:30,627 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-02 00:41:30,629 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-02 00:41:30,632 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-02 00:41:30,635 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-02 00:41:30,639 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-02 00:41:30,640 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-02 00:41:30,640 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-02 00:41:30,640 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-02 00:41:30,640 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-02 00:41:30,640 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-02 00:41:30,640 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:41:30,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-02 00:41:31,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/387 HTTP/1.1" 200 None 2024-09-02 00:41:31,317 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-02 00:41:31,317 [ scc.repo] DEBUG - PR 387 dependabot[bot] 'Bump omero-figure from `47f4948` to `cbdd365`' 2024-09-02 00:41:31,317 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:41:31,317 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:41:31,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:41:31,324 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:41:31,328 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:41:31,329 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:41:31,333 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:41:31,339 [ scc.git] DEBUG Already up to date. 2024-09-02 00:41:31,340 [ scc.git] DEBUG Calling 'git fetch origin pull/387/head' 2024-09-02 00:41:31,697 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-02 00:41:31,698 [ scc.git] DEBUG * branch refs/pull/387/head -> FETCH_HEAD 2024-09-02 00:41:31,705 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:41:31,705 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:41:31,705 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:41:31,711 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...28454b857acac695aa8bb02e890603d821470cd6' 2024-09-02 00:41:31,717 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:41:31,722 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 387 (Bump omero-figure from `47f4948` to `cbdd365`) 28454b857acac695aa8bb02e890603d821470cd6' 2024-09-02 00:41:31,744 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:41:31,747 [ scc.git] DEBUG omero-figure | 2 +- 2024-09-02 00:41:31,747 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-02 00:41:31,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:41:31,876 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:41:32,045 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'cbdd365756caa80353d6b3ffd66259efbda098ee' 2024-09-02 00:41:32,047 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:41:32,048 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:41:32,056 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:41:32,939 [ scc.git] DEBUG has no local changes 2024-09-02 00:41:32,940 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 387 dependabot[bot] 'Bump omero-figure from `47f4948` to `cbdd365`' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:41:33,016 [ scc.git] DEBUG [detached HEAD a3cd9b7] merge master -Dorg -Snone 2024-09-02 00:41:33,016 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-02 00:41:33,016 [ scc.merge] INFO Already up to date. 2024-09-02 00:41:33,016 [ scc.merge] INFO 2024-09-02 00:41:33,016 [ scc.merge] INFO Merged PRs: 2024-09-02 00:41:33,016 [ scc.merge] INFO - PR 387 dependabot[bot] 'Bump omero-figure from `47f4948` to `cbdd365`' 2024-09-02 00:41:33,016 [ scc.merge] INFO 2024-09-02 00:41:33,016 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-02 00:41:33,016 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-09-02 00:41:40,629 [ scc.config] DEBUG Found github.token 2024-09-02 00:41:40,631 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-02 00:41:40,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:41:41,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:41:41,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-02 00:41:41,598 [ scc.gh] DEBUG 4829 remaining from 5000 (Reset at 01:09 2024-09-02 00:41:41,599 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:41:41,604 [ scc.git] DEBUG Check current status 2024-09-02 00:41:41,604 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:41:41,608 [ scc.git] DEBUG a3cd9b7 merge master -Dorg -Snone 2024-09-02 00:41:41,608 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:41:41,659 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-02 00:41:41,662 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-02 00:41:41,665 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-02 00:41:41,668 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-02 00:41:41,763 [ scc.git] DEBUG cbdd365756caa80353d6b3ffd66259efbda098ee omero-figure (v7.0.0-39-gcbdd3657) 2024-09-02 00:41:41,766 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-02 00:41:41,769 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-02 00:41:41,773 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-02 00:41:41,776 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-02 00:41:41,779 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-02 00:41:41,783 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-02 00:41:41,786 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-02 00:41:41,789 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-02 00:41:41,792 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-02 00:41:41,796 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-02 00:41:41,799 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-02 00:41:41,802 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-02 00:41:41,805 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-02 00:41:41,808 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-02 00:41:41,810 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-02 00:41:41,813 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-02 00:41:41,817 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-02 00:41:41,822 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:41:41,822 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-09-02 00:41:41,824 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-09-02 00:41:42,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-02 00:41:42,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:41:42,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:41:43,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:41:43,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:41:43,756 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:41:43,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-02 00:41:43,826 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:41:43,830 [ scc.git] DEBUG Check current status 2024-09-02 00:41:43,830 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:41:43,834 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-09-02 00:41:43,834 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:41:43,873 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:41:44,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-09-02 00:41:44,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:41:45,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:41:45,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:41:45,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:41:45,863 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:41:45,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:41:45,907 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-02 00:41:45,907 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:41:45,912 [ scc.git] DEBUG Check current status 2024-09-02 00:41:45,912 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:41:45,916 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-09-02 00:41:45,917 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:41:45,961 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:41:46,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-09-02 00:41:46,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:41:47,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:41:47,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:41:47,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:41:47,973 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:41:48,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:41:48,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-02 00:41:48,016 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:41:48,021 [ scc.git] DEBUG Check current status 2024-09-02 00:41:48,021 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:41:48,026 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-09-02 00:41:48,026 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:41:48,071 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:41:48,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-09-02 00:41:48,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:41:49,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:41:49,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:41:50,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:41:50,080 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:41:50,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:41:50,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-02 00:41:50,120 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:41:50,125 [ scc.git] DEBUG Check current status 2024-09-02 00:41:50,125 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:41:50,128 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-02 00:41:50,129 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:41:50,169 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:41:50,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-09-02 00:41:50,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:41:51,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:41:51,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:41:52,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:41:52,303 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:41:52,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:41:52,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-02 00:41:52,342 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:41:52,348 [ scc.git] DEBUG Check current status 2024-09-02 00:41:52,348 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:41:52,368 [ scc.git] DEBUG cbdd3657 Merge pull request #576 from Rdornier/fix-color-picker-popup 2024-09-02 00:41:52,368 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:41:52,412 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:41:52,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-09-02 00:41:53,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:41:53,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:41:54,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:41:54,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:41:54,398 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:41:54,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:41:54,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-02 00:41:54,444 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:41:54,449 [ scc.git] DEBUG Check current status 2024-09-02 00:41:54,450 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:41:54,454 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-02 00:41:54,454 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:41:54,500 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:41:54,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-09-02 00:41:55,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:41:55,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:41:56,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:41:56,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:41:56,621 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:41:56,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:41:56,661 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-02 00:41:56,661 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:41:56,665 [ scc.git] DEBUG Check current status 2024-09-02 00:41:56,666 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:41:56,669 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-09-02 00:41:56,670 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:41:56,712 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:41:57,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-09-02 00:41:57,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:41:57,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:41:58,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:41:58,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:41:58,808 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:41:58,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:41:58,852 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-02 00:41:58,852 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:41:58,857 [ scc.git] DEBUG Check current status 2024-09-02 00:41:58,857 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:41:58,862 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-09-02 00:41:58,862 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:41:58,909 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:41:59,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-09-02 00:41:59,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:42:00,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:42:00,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:42:00,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:42:00,932 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:00,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:00,976 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-02 00:42:00,976 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:42:00,982 [ scc.git] DEBUG Check current status 2024-09-02 00:42:00,982 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:42:00,987 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-09-02 00:42:00,988 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:42:01,029 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:42:01,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-09-02 00:42:01,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:42:02,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:42:02,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:42:03,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:42:03,023 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:03,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:03,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-02 00:42:03,069 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:42:03,075 [ scc.git] DEBUG Check current status 2024-09-02 00:42:03,075 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:42:03,081 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-02 00:42:03,081 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:42:03,131 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:42:03,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-09-02 00:42:03,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:42:04,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:42:04,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:42:05,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:42:05,141 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:05,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:05,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-02 00:42:05,185 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:42:05,191 [ scc.git] DEBUG Check current status 2024-09-02 00:42:05,191 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:42:05,196 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-09-02 00:42:05,196 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:42:05,246 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:42:05,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-09-02 00:42:06,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:42:06,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:42:06,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:42:07,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:42:07,292 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:07,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:07,340 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-02 00:42:07,340 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:42:07,347 [ scc.git] DEBUG Check current status 2024-09-02 00:42:07,347 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:42:07,353 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-09-02 00:42:07,353 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:42:07,403 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:42:07,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-09-02 00:42:08,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:42:08,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:42:09,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:42:09,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:42:09,431 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:09,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:09,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-02 00:42:09,475 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:42:09,480 [ scc.git] DEBUG Check current status 2024-09-02 00:42:09,480 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:42:09,485 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-09-02 00:42:09,486 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:42:09,538 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:42:09,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-09-02 00:42:10,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:42:10,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:42:11,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:42:11,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:42:11,604 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:11,662 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:11,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-02 00:42:11,664 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:42:11,671 [ scc.git] DEBUG Check current status 2024-09-02 00:42:11,672 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:42:11,680 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-02 00:42:11,680 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:42:11,744 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:42:12,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-09-02 00:42:12,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:42:13,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:42:13,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:42:13,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:42:13,857 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:13,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:13,899 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-02 00:42:13,899 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:42:13,905 [ scc.git] DEBUG Check current status 2024-09-02 00:42:13,905 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:42:13,910 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-09-02 00:42:13,910 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:42:13,959 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:42:14,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-02 00:42:14,255 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-02 00:42:14,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-09-02 00:42:14,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:42:15,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:42:15,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:42:16,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:42:16,108 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:16,155 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:16,156 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-02 00:42:16,157 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:42:16,162 [ scc.git] DEBUG Check current status 2024-09-02 00:42:16,162 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:42:16,168 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-09-02 00:42:16,168 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:42:16,251 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:42:16,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-09-02 00:42:17,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:42:17,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:42:17,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:42:18,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:42:18,249 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:18,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:18,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-02 00:42:18,312 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:42:18,319 [ scc.git] DEBUG Check current status 2024-09-02 00:42:18,319 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:42:18,325 [ scc.git] DEBUG deab817 update setup-python to v4 2024-09-02 00:42:18,325 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:42:18,384 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:42:18,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-09-02 00:42:19,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:42:19,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:42:19,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:42:20,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:42:20,369 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:20,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:20,414 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-02 00:42:20,415 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:42:20,422 [ scc.git] DEBUG Check current status 2024-09-02 00:42:20,422 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:42:20,436 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-02 00:42:20,436 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:42:20,486 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:42:20,487 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-09-02 00:42:20,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-09-02 00:42:21,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:42:21,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:42:22,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:42:22,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:42:22,557 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:22,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:22,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-02 00:42:22,628 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:42:22,635 [ scc.git] DEBUG Check current status 2024-09-02 00:42:22,636 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:42:22,643 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-02 00:42:22,643 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:42:22,719 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:42:22,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-02 00:42:22,950 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-02 00:42:23,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-09-02 00:42:23,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:42:24,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:42:24,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:42:25,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:42:25,046 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:25,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:25,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-02 00:42:25,087 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:42:25,092 [ scc.git] DEBUG Check current status 2024-09-02 00:42:25,092 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:42:25,096 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-09-02 00:42:25,097 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:42:25,142 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:42:25,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-02 00:42:25,445 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-02 00:42:25,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-09-02 00:42:26,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:42:26,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:42:26,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:42:27,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:42:27,377 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:27,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:27,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-02 00:42:27,419 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:42:27,424 [ scc.git] DEBUG Check current status 2024-09-02 00:42:27,424 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:42:27,429 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-02 00:42:27,430 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:42:27,478 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:42:27,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-09-02 00:42:28,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:42:28,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:42:29,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:42:29,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:42:29,542 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:29,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:29,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-02 00:42:29,582 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-02 00:42:29,587 [ scc.git] DEBUG Check current status 2024-09-02 00:42:29,587 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:42:29,602 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-02 00:42:29,602 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:42:29,645 [ scc.config] DEBUG Found remote.origin.url 2024-09-02 00:42:29,646 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-09-02 00:42:29,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-02 00:42:29,966 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-02 00:42:30,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-09-02 00:42:30,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-02 00:42:31,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-02 00:42:31,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-02 00:42:31,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-02 00:42:31,842 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:31,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:31,889 [ scc.git] DEBUG Resetting... 2024-09-02 00:42:31,889 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-02 00:42:31,900 [ scc.git] DEBUG HEAD is now at a3cd9b7 merge master -Dorg -Snone 2024-09-02 00:42:31,900 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-02 00:42:32,011 [ scc.git] DEBUG Check current status 2024-09-02 00:42:32,011 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-02 00:42:32,018 [ scc.git] DEBUG a3cd9b7 merge master -Dorg -Snone 2024-09-02 00:42:32,018 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-02 00:42:32,067 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-02 00:42:32,069 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-02 00:42:32,072 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-02 00:42:32,075 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-02 00:42:32,083 [ scc.git] DEBUG cbdd365756caa80353d6b3ffd66259efbda098ee omero-figure (v7.0.0-39-gcbdd3657) 2024-09-02 00:42:32,086 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-02 00:42:32,089 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-02 00:42:32,092 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-02 00:42:32,095 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-02 00:42:32,098 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-02 00:42:32,101 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-02 00:42:32,104 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-02 00:42:32,108 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-02 00:42:32,113 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-02 00:42:32,119 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-02 00:42:32,123 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-02 00:42:32,127 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-02 00:42:32,133 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-02 00:42:32,138 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-02 00:42:32,142 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-02 00:42:32,147 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-02 00:42:32,151 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-02 00:42:32,153 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-02 00:42:32,153 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-02 00:42:32,153 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-02 00:42:32,153 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-02 00:42:32,153 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-02 00:42:32,154 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-09-02 00:42:32,154 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:42:32,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-02 00:42:32,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/387 HTTP/1.1" 200 None 2024-09-02 00:42:32,839 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-02 00:42:33,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/28454b857acac695aa8bb02e890603d821470cd6 HTTP/1.1" 200 None 2024-09-02 00:42:33,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/28454b857acac695aa8bb02e890603d821470cd6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:42:34,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/28454b857acac695aa8bb02e890603d821470cd6 HTTP/1.1" 200 None 2024-09-02 00:42:34,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/28454b857acac695aa8bb02e890603d821470cd6?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:42:34,842 [ scc.repo] DEBUG - PR 387 dependabot[bot] 'Bump omero-figure from `47f4948` to `cbdd365`' 2024-09-02 00:42:34,842 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:42:34,843 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:42:34,843 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:42:34,848 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:42:34,853 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:42:34,853 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:42:34,859 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:42:34,864 [ scc.git] DEBUG Already up to date. 2024-09-02 00:42:34,865 [ scc.git] DEBUG Calling 'git fetch origin pull/387/head' 2024-09-02 00:42:35,199 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-02 00:42:35,200 [ scc.git] DEBUG * branch refs/pull/387/head -> FETCH_HEAD 2024-09-02 00:42:35,205 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:42:35,205 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:42:35,205 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:42:35,211 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...28454b857acac695aa8bb02e890603d821470cd6' 2024-09-02 00:42:35,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:42:35,222 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 387 (Bump omero-figure from `47f4948` to `cbdd365`) 28454b857acac695aa8bb02e890603d821470cd6' 2024-09-02 00:42:35,227 [ scc.git] DEBUG Already up to date. 2024-09-02 00:42:35,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:42:35,361 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:42:35,418 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:42:35,418 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:42:35,426 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:42:35,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-09-02 00:42:36,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-09-02 00:42:36,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-02 00:42:37,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:42:37,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:42:38,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-02 00:42:38,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:42:38,719 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-09-02 00:42:38,719 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:42:38,719 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-02 00:42:38,719 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:42:38,719 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:42:38,725 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:42:38,732 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:42:38,732 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:42:38,738 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:42:38,745 [ scc.git] DEBUG Already up to date. 2024-09-02 00:42:38,746 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-09-02 00:42:39,145 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-09-02 00:42:39,145 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-09-02 00:42:39,151 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:42:39,152 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:42:39,152 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:42:39,158 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-02 00:42:39,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:42:39,173 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-02 00:42:39,206 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:42:39,210 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-09-02 00:42:39,210 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-09-02 00:42:39,210 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-09-02 00:42:39,210 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-09-02 00:42:39,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:42:39,381 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:42:39,423 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:42:39,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:42:39,429 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:39,468 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:42:39,474 [ scc.git] DEBUG has no local changes 2024-09-02 00:42:39,475 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:42:39,483 [ scc.git] DEBUG [detached HEAD 3251d64] merge master -Dorg -Ssuccess-only 2024-09-02 00:42:39,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:39,484 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:42:39,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-09-02 00:42:40,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-09-02 00:42:40,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-09-02 00:42:41,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-02 00:42:41,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:42:42,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:42:42,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-02 00:42:43,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:42:43,152 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-09-02 00:42:43,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-09-02 00:42:44,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-09-02 00:42:44,159 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:42:44,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-02 00:42:44,159 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:42:44,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:42:44,165 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:42:44,170 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:42:44,170 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:42:44,176 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:42:44,182 [ scc.git] DEBUG Already up to date. 2024-09-02 00:42:44,183 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-09-02 00:42:44,550 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-09-02 00:42:44,550 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-09-02 00:42:44,555 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:42:44,555 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:42:44,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:42:44,561 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-02 00:42:44,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:42:44,570 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-02 00:42:44,595 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:42:44,598 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-09-02 00:42:44,598 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-09-02 00:42:44,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:42:44,743 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:42:44,789 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:42:44,789 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:42:44,795 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:44,833 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:42:44,839 [ scc.git] DEBUG has no local changes 2024-09-02 00:42:44,839 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:42:44,847 [ scc.git] DEBUG [detached HEAD 0a8508c] merge master -Dorg -Ssuccess-only 2024-09-02 00:42:44,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:44,848 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:42:45,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-09-02 00:42:45,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-09-02 00:42:46,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-09-02 00:42:46,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-09-02 00:42:47,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-09-02 00:42:47,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-02 00:42:48,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:42:48,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-02 00:42:49,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:42:49,166 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-09-02 00:42:49,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-09-02 00:42:50,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-09-02 00:42:50,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-09-02 00:42:50,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-09-02 00:42:51,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-09-02 00:42:51,447 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:42:51,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-02 00:42:51,448 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:42:51,448 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:42:51,453 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:42:51,458 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:42:51,458 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:42:51,463 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:42:51,469 [ scc.git] DEBUG Already up to date. 2024-09-02 00:42:51,469 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-09-02 00:42:51,917 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-09-02 00:42:51,917 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-09-02 00:42:51,922 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:42:51,922 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:42:51,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:42:51,928 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-02 00:42:51,935 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:42:51,940 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-02 00:42:51,968 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-09-02 00:42:51,969 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:42:51,972 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-09-02 00:42:51,972 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-09-02 00:42:52,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:42:52,150 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:42:52,191 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:42:52,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:42:52,197 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:42:52,240 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:42:52,248 [ scc.git] DEBUG has no local changes 2024-09-02 00:42:52,248 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:42:52,256 [ scc.git] DEBUG [detached HEAD 20bb525] merge master -Dorg -Ssuccess-only 2024-09-02 00:42:52,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:42:52,257 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:42:52,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-09-02 00:42:53,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-09-02 00:42:53,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-09-02 00:42:54,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-09-02 00:42:54,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-02 00:42:55,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:42:55,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:42:55,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-02 00:42:56,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-09-02 00:42:56,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-02 00:42:57,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-09-02 00:42:57,169 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-09-02 00:42:57,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-09-02 00:42:58,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-09-02 00:42:58,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-09-02 00:42:59,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-02 00:42:59,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:43:00,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-02 00:43:00,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:43:00,560 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-02 00:43:01,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-09-02 00:43:01,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-09-02 00:43:02,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-02 00:43:02,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:43:03,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-02 00:43:03,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:43:03,450 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-09-02 00:43:03,450 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:43:03,450 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-02 00:43:03,450 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:43:03,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:03,459 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:43:03,466 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:43:03,467 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:43:03,476 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:43:03,484 [ scc.git] DEBUG Already up to date. 2024-09-02 00:43:03,484 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-09-02 00:43:03,868 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-02 00:43:03,869 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-09-02 00:43:03,874 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-09-02 00:43:04,224 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-02 00:43:04,224 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-09-02 00:43:04,229 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-09-02 00:43:04,517 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-02 00:43:04,517 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-09-02 00:43:04,522 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:43:04,523 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:43:04,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:04,530 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-02 00:43:04,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:04,549 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-02 00:43:04,678 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-02 00:43:04,678 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-02 00:43:04,678 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-02 00:43:04,678 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-02 00:43:04,678 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-02 00:43:04,686 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-02 00:43:04,692 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-02 00:43:04,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:43:04,836 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-02 00:43:04,844 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-02 00:43:04,850 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#172](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-09-02 00:43:04,856 [ scc.config] DEBUG Found github.token 2024-09-02 00:43:04,856 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-09-02 00:43:04,856 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-02 00:43:04,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:04,872 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-02 00:43:04,902 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-09-02 00:43:04,902 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-09-02 00:43:04,902 [ scc.git] DEBUG Auto-merging setup.py 2024-09-02 00:43:04,903 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-02 00:43:04,903 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-02 00:43:04,903 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-02 00:43:04,903 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-09-02 00:43:04,903 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-02 00:43:04,903 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-02 00:43:04,910 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-02 00:43:04,918 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-02 00:43:05,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:43:05,221 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-02 00:43:05,229 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-02 00:43:05,235 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#172](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-09-02 00:43:05,240 [ scc.config] DEBUG Found github.token 2024-09-02 00:43:05,240 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-09-02 00:43:05,241 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-02 00:43:05,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:05,253 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-02 00:43:05,287 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-09-02 00:43:05,288 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-02 00:43:05,288 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:43:05,291 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-09-02 00:43:05,291 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-09-02 00:43:05,291 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-09-02 00:43:05,292 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-09-02 00:43:05,292 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-09-02 00:43:05,292 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-09-02 00:43:05,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:43:05,603 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:43:05,642 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:43:05,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:05,647 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:43:05,687 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:43:05,695 [ scc.git] DEBUG has no local changes 2024-09-02 00:43:05,695 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:43:05,704 [ scc.git] DEBUG [detached HEAD c644f82] merge master -Dorg -Ssuccess-only 2024-09-02 00:43:05,705 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:43:05,705 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:43:06,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-09-02 00:43:06,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-09-02 00:43:07,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583 HTTP/1.1" 200 None 2024-09-02 00:43:07,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583/comments HTTP/1.1" 200 None 2024-09-02 00:43:07,490 [ scc.repo] DEBUG # ... Include label: include 2024-09-02 00:43:08,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47 HTTP/1.1" 200 None 2024-09-02 00:43:08,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:43:09,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:43:09,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47 HTTP/1.1" 200 None 2024-09-02 00:43:09,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b47792851e0427c1d5fc7ba778783b8e09e21f47?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:43:09,873 [ scc.repo] DEBUG - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-02 00:43:10,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-09-02 00:43:10,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-09-02 00:43:11,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-09-02 00:43:11,302 [ scc.repo] DEBUG # ... Include label: include 2024-09-02 00:43:11,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/08bc8d5ebd74e6532c68ea4e4d2e8a13a22c70ee HTTP/1.1" 200 None 2024-09-02 00:43:12,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/08bc8d5ebd74e6532c68ea4e4d2e8a13a22c70ee/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:43:12,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/08bc8d5ebd74e6532c68ea4e4d2e8a13a22c70ee/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:43:13,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-09-02 00:43:13,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-09-02 00:43:13,696 [ scc.repo] DEBUG # ... Include label: include 2024-09-02 00:43:14,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cde38a507d291b03c4b821a8d4d110985ed17164 HTTP/1.1" 200 None 2024-09-02 00:43:14,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cde38a507d291b03c4b821a8d4d110985ed17164/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:43:15,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cde38a507d291b03c4b821a8d4d110985ed17164/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:43:15,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cde38a507d291b03c4b821a8d4d110985ed17164 HTTP/1.1" 200 None 2024-09-02 00:43:15,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/cde38a507d291b03c4b821a8d4d110985ed17164?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:43:15,933 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-09-02 00:43:16,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-09-02 00:43:16,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-09-02 00:43:17,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-02 00:43:17,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:43:18,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:43:18,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-02 00:43:19,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:43:19,075 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-02 00:43:19,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560 HTTP/1.1" 200 None 2024-09-02 00:43:19,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560/comments HTTP/1.1" 200 None 2024-09-02 00:43:20,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/996699f155d2df664d08ff1b8b01c8f6305074be HTTP/1.1" 200 None 2024-09-02 00:43:20,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/996699f155d2df664d08ff1b8b01c8f6305074be/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:43:21,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/996699f155d2df664d08ff1b8b01c8f6305074be/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:43:21,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/996699f155d2df664d08ff1b8b01c8f6305074be HTTP/1.1" 200 None 2024-09-02 00:43:22,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/996699f155d2df664d08ff1b8b01c8f6305074be?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:43:22,302 [ scc.repo] DEBUG - PR 560 will-moore 'Max projection bytes' 2024-09-02 00:43:22,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-09-02 00:43:23,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-09-02 00:43:23,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-09-02 00:43:24,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:43:24,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:43:25,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-09-02 00:43:25,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:43:25,394 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-09-02 00:43:25,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-09-02 00:43:26,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549/comments HTTP/1.1" 200 None 2024-09-02 00:43:26,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/09ffee7b7320d77fb2be051a0a8bfa3b25fe737a HTTP/1.1" 200 None 2024-09-02 00:43:27,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/09ffee7b7320d77fb2be051a0a8bfa3b25fe737a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:43:27,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/09ffee7b7320d77fb2be051a0a8bfa3b25fe737a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:43:28,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/09ffee7b7320d77fb2be051a0a8bfa3b25fe737a HTTP/1.1" 200 None 2024-09-02 00:43:28,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/09ffee7b7320d77fb2be051a0a8bfa3b25fe737a?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:43:28,604 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-09-02 00:43:28,604 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:43:28,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-02 00:43:28,605 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:43:28,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:28,612 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:43:28,618 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:43:28,618 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:43:28,624 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:43:28,630 [ scc.git] DEBUG Already up to date. 2024-09-02 00:43:28,631 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-09-02 00:43:28,999 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-02 00:43:29,000 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-09-02 00:43:29,005 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-09-02 00:43:29,576 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-02 00:43:29,577 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-09-02 00:43:29,582 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head' 2024-09-02 00:43:29,884 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-02 00:43:29,884 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD 2024-09-02 00:43:29,890 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-09-02 00:43:30,203 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-02 00:43:30,203 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-09-02 00:43:30,208 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-09-02 00:43:30,567 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-02 00:43:30,567 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-09-02 00:43:30,573 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head' 2024-09-02 00:43:31,216 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-02 00:43:31,216 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD 2024-09-02 00:43:31,221 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:43:31,221 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:43:31,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:31,228 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ffee7b7320d77fb2be051a0a8bfa3b25fe737a' 2024-09-02 00:43:31,237 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:31,242 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 09ffee7b7320d77fb2be051a0a8bfa3b25fe737a' 2024-09-02 00:43:31,334 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-02 00:43:31,335 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-02 00:43:31,335 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-09-02 00:43:31,335 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:43:31,345 [ scc.git] DEBUG src/css/figure.css | 9 ++++ 2024-09-02 00:43:31,345 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-09-02 00:43:31,345 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++ 2024-09-02 00:43:31,345 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-09-02 00:43:31,346 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 ++++++++++++- 2024-09-02 00:43:31,346 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-09-02 00:43:31,346 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-09-02 00:43:31,346 [ scc.git] DEBUG src/js/views/right_panel_view.js | 72 +++++++++++++++++++++++++++- 2024-09-02 00:43:31,346 [ scc.git] DEBUG src/js/views/util.js | 54 +++++++++++++++++++++ 2024-09-02 00:43:31,346 [ scc.git] DEBUG src/templates/rois_form.template.html | 88 ++++++++++++++++++++++++++++++++++- 2024-09-02 00:43:31,346 [ scc.git] DEBUG 10 files changed, 357 insertions(+), 6 deletions(-) 2024-09-02 00:43:31,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:43:31,478 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-09-02 00:43:31,487 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:31,492 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-09-02 00:43:31,651 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-02 00:43:31,652 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-02 00:43:31,652 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-09-02 00:43:31,652 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-02 00:43:31,652 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:43:31,659 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-09-02 00:43:31,659 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-09-02 00:43:31,659 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-09-02 00:43:31,659 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-09-02 00:43:31,659 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-09-02 00:43:31,659 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-09-02 00:43:31,659 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-09-02 00:43:31,659 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-09-02 00:43:31,659 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-09-02 00:43:31,659 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-09-02 00:43:31,659 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-09-02 00:43:31,659 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-09-02 00:43:31,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:43:31,872 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...996699f155d2df664d08ff1b8b01c8f6305074be' 2024-09-02 00:43:31,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:31,887 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (Max projection bytes) 996699f155d2df664d08ff1b8b01c8f6305074be' 2024-09-02 00:43:32,013 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-02 00:43:32,013 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-02 00:43:32,013 [ scc.git] DEBUG Auto-merging src/index.html 2024-09-02 00:43:32,013 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2024-09-02 00:43:32,014 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-02 00:43:32,014 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-09-02 00:43:32,014 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:43:32,022 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 24 +++++++-- 2024-09-02 00:43:32,022 [ scc.git] DEBUG omero_figure/urls.py | 10 +++- 2024-09-02 00:43:32,022 [ scc.git] DEBUG omero_figure/views.py | 58 ++++++++++++++++++++++ 2024-09-02 00:43:32,022 [ scc.git] DEBUG src/css/figure.css | 5 -- 2024-09-02 00:43:32,022 [ scc.git] DEBUG src/index.html | 1 + 2024-09-02 00:43:32,022 [ scc.git] DEBUG src/js/models/figure_model.js | 29 ++++++++++- 2024-09-02 00:43:32,022 [ scc.git] DEBUG src/js/models/panel_model.js | 29 ++++++++++- 2024-09-02 00:43:32,022 [ scc.git] DEBUG src/js/views/info_panel_view.js | 3 +- 2024-09-02 00:43:32,022 [ scc.git] DEBUG src/js/views/modal_views.js | 2 + 2024-09-02 00:43:32,022 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2024-09-02 00:43:32,022 [ scc.git] DEBUG src/js/views/right_panel_view.js | 5 ++ 2024-09-02 00:43:32,022 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 3 +- 2024-09-02 00:43:32,022 [ scc.git] DEBUG src/templates/image_display_options.template.html | 6 ++- 2024-09-02 00:43:32,023 [ scc.git] DEBUG src/templates/info_panel.template.html | 2 + 2024-09-02 00:43:32,023 [ scc.git] DEBUG 14 files changed, 163 insertions(+), 16 deletions(-) 2024-09-02 00:43:32,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:43:32,267 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-02 00:43:32,277 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:32,283 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-02 00:43:32,331 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:43:32,335 [ scc.git] DEBUG setup.py | 2 +- 2024-09-02 00:43:32,335 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-02 00:43:32,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:43:32,659 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cde38a507d291b03c4b821a8d4d110985ed17164' 2024-09-02 00:43:32,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:32,675 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) cde38a507d291b03c4b821a8d4d110985ed17164' 2024-09-02 00:43:32,884 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-02 00:43:32,885 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-02 00:43:32,885 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-02 00:43:32,885 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2024-09-02 00:43:32,885 [ scc.git] DEBUG Auto-merging src/js/shape_editor/rect.js 2024-09-02 00:43:32,885 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/rect.js 2024-09-02 00:43:32,885 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-02 00:43:32,885 [ scc.git] DEBUG Auto-merging src/templates/shapes/shape_toolbar.template.html 2024-09-02 00:43:32,885 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-02 00:43:32,885 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-02 00:43:32,895 [ scc.git] DEBUG Calling 'git reset --hard d2b406235e13f2e10612dd50ca7f3ec3f13b0dc9' 2024-09-02 00:43:32,908 [ scc.git] DEBUG HEAD is now at d2b40623 merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 2024-09-02 00:43:33,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:43:33,038 [ scc.git] DEBUG Calling 'git merge-base cbdd365756caa80353d6b3ffd66259efbda098ee cde38a507d291b03c4b821a8d4d110985ed17164' 2024-09-02 00:43:33,046 [ scc.git] DEBUG Calling 'git diff --name-only cbdd365756caa80353d6b3ffd66259efbda098ee..cbdd365756caa80353d6b3ffd66259efbda098ee' 2024-09-02 00:43:33,053 [ scc.git] INFO - PR 577 Rdornier 'Fill rois' Conflicting PR. Removed from build [OMERO-plugins-push#172](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/consoleText) for more details. Possible conflicts: - PR #549 will-moore 'Inset feature' - src/js/shape_editor/rect.js - PR #555 will-moore 'Points in shape editor' - omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py - PR #560 will-moore 'Max projection bytes' - omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py --conflicts 2024-09-02 00:43:33,059 [ scc.config] DEBUG Found github.token 2024-09-02 00:43:33,059 [ scc.git] DEBUG Adding comment to issue #577. 2024-09-02 00:43:33,765 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 201 2212 2024-09-02 00:43:33,766 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b47792851e0427c1d5fc7ba778783b8e09e21f47' 2024-09-02 00:43:33,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:33,790 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Add Hilo Checkbox for LUT Toggling in Channel Slider View) b47792851e0427c1d5fc7ba778783b8e09e21f47' 2024-09-02 00:43:33,875 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-02 00:43:33,876 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:43:33,882 [ scc.git] DEBUG src/js/models/panel_model.js | 10 +++++++++ 2024-09-02 00:43:33,882 [ scc.git] DEBUG src/js/models/undo.js | 3 ++- 2024-09-02 00:43:33,882 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 42 +++++++++++++++++++++++++++++++++--- 2024-09-02 00:43:33,882 [ scc.git] DEBUG src/templates/checkbox_template.html | 4 ++++ 2024-09-02 00:43:33,882 [ scc.git] DEBUG 4 files changed, 55 insertions(+), 4 deletions(-) 2024-09-02 00:43:33,882 [ scc.git] DEBUG create mode 100644 src/templates/checkbox_template.html 2024-09-02 00:43:34,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:43:34,163 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:43:34,207 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:43:34,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:34,214 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:43:34,254 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:43:34,264 [ scc.git] DEBUG has no local changes 2024-09-02 00:43:34,264 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 584 Rdornier 'Link url to image' (user: Rdornier) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 578 Rdornier 'Image outline' (status: failure) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:43:34,275 [ scc.git] DEBUG [detached HEAD e0445b36] merge master -Dorg -Ssuccess-only 2024-09-02 00:43:34,276 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:43:34,276 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:43:34,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-09-02 00:43:35,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-09-02 00:43:35,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-09-02 00:43:36,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-02 00:43:36,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:43:37,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-02 00:43:37,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:43:37,495 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-09-02 00:43:37,495 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:43:37,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-02 00:43:37,495 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:43:37,495 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:37,501 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:43:37,506 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:43:37,506 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:43:37,511 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:43:37,516 [ scc.git] DEBUG Already up to date. 2024-09-02 00:43:37,516 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-09-02 00:43:37,853 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-09-02 00:43:37,853 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-09-02 00:43:37,857 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:43:37,857 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:43:37,858 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:37,864 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-02 00:43:37,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:37,875 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-02 00:43:37,891 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-09-02 00:43:37,892 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:43:37,894 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-09-02 00:43:37,894 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-09-02 00:43:38,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:43:38,032 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:43:38,072 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:43:38,072 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:38,077 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:43:38,115 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:43:38,123 [ scc.git] DEBUG has no local changes 2024-09-02 00:43:38,123 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:43:38,131 [ scc.git] DEBUG [detached HEAD 06e4d1f] merge master -Dorg -Ssuccess-only 2024-09-02 00:43:38,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:43:38,132 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:43:38,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-09-02 00:43:38,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-09-02 00:43:38,965 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-02 00:43:39,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-02 00:43:39,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:43:40,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:43:40,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-02 00:43:41,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:43:41,302 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-02 00:43:41,303 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:43:41,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-02 00:43:41,303 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:43:41,303 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:41,308 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:43:41,313 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:43:41,313 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:43:41,318 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:43:41,323 [ scc.git] DEBUG Already up to date. 2024-09-02 00:43:41,324 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-09-02 00:43:41,678 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-09-02 00:43:41,678 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-09-02 00:43:41,682 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:43:41,682 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:43:41,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:41,687 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-02 00:43:41,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:41,697 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-02 00:43:41,707 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:43:41,711 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-09-02 00:43:41,711 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-09-02 00:43:41,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:43:41,849 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:43:41,892 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:43:41,892 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:43:41,899 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:43:41,942 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:43:41,951 [ scc.git] DEBUG has no local changes 2024-09-02 00:43:41,951 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:43:41,962 [ scc.git] DEBUG [detached HEAD 2768311] merge master -Dorg -Ssuccess-only 2024-09-02 00:43:41,962 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:43:41,963 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:43:42,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-09-02 00:43:42,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-09-02 00:43:42,887 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-02 00:43:43,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-02 00:43:43,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:43:44,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:43:44,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-02 00:43:45,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:43:45,286 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-02 00:43:45,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-09-02 00:43:46,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-09-02 00:43:46,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-02 00:43:47,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:43:47,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:43:48,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-02 00:43:48,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:43:48,532 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-02 00:43:48,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-09-02 00:43:49,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-09-02 00:43:49,421 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-02 00:43:50,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-02 00:43:50,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:43:51,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:43:51,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-02 00:43:52,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:43:52,052 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-02 00:43:52,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-09-02 00:43:52,503 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-02 00:43:53,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-02 00:43:53,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:43:54,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:43:54,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-02 00:43:55,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:43:55,094 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-02 00:43:55,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-09-02 00:43:55,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-09-02 00:43:56,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-02 00:43:56,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:43:57,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:43:57,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-02 00:43:58,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:43:58,392 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-02 00:43:58,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-09-02 00:43:59,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-09-02 00:43:59,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-02 00:44:00,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:44:00,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:44:01,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-02 00:44:01,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:44:01,724 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-09-02 00:44:02,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-09-02 00:44:02,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-09-02 00:44:03,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-02 00:44:03,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:44:04,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-02 00:44:04,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:44:04,429 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-09-02 00:44:04,430 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:44:04,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-02 00:44:04,430 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:04,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:04,436 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:44:04,441 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:44:04,442 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:44:04,447 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:44:04,454 [ scc.git] DEBUG Already up to date. 2024-09-02 00:44:04,455 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-09-02 00:44:04,772 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-02 00:44:04,772 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-09-02 00:44:04,777 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-09-02 00:44:05,735 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-02 00:44:05,735 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-09-02 00:44:05,740 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-09-02 00:44:06,138 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-02 00:44:06,138 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-09-02 00:44:06,143 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-09-02 00:44:06,419 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-02 00:44:06,419 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-09-02 00:44:06,424 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-09-02 00:44:06,700 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-02 00:44:06,701 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-09-02 00:44:06,705 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-09-02 00:44:07,023 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-02 00:44:07,024 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-09-02 00:44:07,028 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-09-02 00:44:07,306 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-02 00:44:07,306 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-09-02 00:44:07,310 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:44:07,310 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:07,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:07,317 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-02 00:44:07,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:07,332 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-02 00:44:07,408 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-02 00:44:07,410 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:44:07,413 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-09-02 00:44:07,414 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-09-02 00:44:07,414 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-09-02 00:44:07,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:07,558 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-02 00:44:07,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:07,570 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-02 00:44:07,673 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-09-02 00:44:07,674 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-02 00:44:07,674 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-02 00:44:07,674 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-09-02 00:44:07,674 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:44:07,678 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-09-02 00:44:07,678 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-09-02 00:44:07,679 [ scc.git] DEBUG src/app/header.html | 5 + 2024-09-02 00:44:07,679 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-09-02 00:44:07,679 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-09-02 00:44:07,679 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-09-02 00:44:07,679 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-09-02 00:44:07,679 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-09-02 00:44:07,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:07,954 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-02 00:44:07,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:07,966 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-02 00:44:08,028 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-09-02 00:44:08,029 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:44:08,032 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-09-02 00:44:08,032 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-09-02 00:44:08,032 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-09-02 00:44:08,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:08,359 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-02 00:44:08,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:08,381 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-02 00:44:08,442 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:44:08,452 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-09-02 00:44:08,452 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-09-02 00:44:08,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:08,761 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-02 00:44:08,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:08,784 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-02 00:44:08,843 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-02 00:44:08,843 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:44:09,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:09,145 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-02 00:44:09,153 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:09,157 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-02 00:44:09,307 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-02 00:44:09,307 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-02 00:44:09,307 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-02 00:44:09,308 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:44:09,313 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-09-02 00:44:09,313 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-09-02 00:44:09,313 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-09-02 00:44:09,313 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-09-02 00:44:09,313 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-09-02 00:44:09,313 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-09-02 00:44:09,313 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-09-02 00:44:09,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:09,535 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-02 00:44:09,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:09,547 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-02 00:44:09,582 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-02 00:44:09,582 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:44:09,592 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-09-02 00:44:09,592 [ scc.git] DEBUG package.json | 2 +- 2024-09-02 00:44:09,592 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-09-02 00:44:09,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:09,920 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:44:09,958 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:09,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:09,964 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:44:10,002 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:44:10,013 [ scc.git] DEBUG has no local changes 2024-09-02 00:44:10,013 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:44:10,022 [ scc.git] DEBUG [detached HEAD a79c4fe] merge master -Dorg -Ssuccess-only 2024-09-02 00:44:10,023 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:44:10,023 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:44:10,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-09-02 00:44:10,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-09-02 00:44:11,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-09-02 00:44:11,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-02 00:44:12,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:44:12,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:44:13,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-02 00:44:13,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:44:13,687 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-09-02 00:44:13,687 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:44:13,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-02 00:44:13,687 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:13,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:13,693 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:44:13,699 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:44:13,699 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:44:13,704 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:44:13,709 [ scc.git] DEBUG Already up to date. 2024-09-02 00:44:13,710 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-09-02 00:44:14,030 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-09-02 00:44:14,031 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-09-02 00:44:14,034 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:44:14,034 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:14,035 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:14,040 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-02 00:44:14,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:14,053 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-02 00:44:14,064 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:44:14,067 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-09-02 00:44:14,067 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-09-02 00:44:14,067 [ scc.git] DEBUG requirements.txt | 2 +- 2024-09-02 00:44:14,067 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-09-02 00:44:14,067 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-09-02 00:44:14,067 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-09-02 00:44:14,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:14,201 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:44:14,241 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:14,241 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:14,246 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:44:14,284 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:44:14,290 [ scc.git] DEBUG has no local changes 2024-09-02 00:44:14,290 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:44:14,298 [ scc.git] DEBUG [detached HEAD f5aab6f] merge master -Dorg -Ssuccess-only 2024-09-02 00:44:14,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:44:14,299 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:44:14,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-09-02 00:44:15,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-09-02 00:44:15,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-09-02 00:44:16,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-02 00:44:16,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:44:17,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-02 00:44:17,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:44:17,449 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-09-02 00:44:17,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-09-02 00:44:18,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-09-02 00:44:18,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-02 00:44:19,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:44:19,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-02 00:44:20,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:44:20,232 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-02 00:44:20,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-09-02 00:44:21,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-09-02 00:44:21,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-02 00:44:22,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:44:22,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-02 00:44:22,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:44:22,904 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-02 00:44:22,904 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:44:22,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-02 00:44:22,904 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:22,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:22,910 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:44:22,915 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:44:22,915 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:44:22,919 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:44:22,924 [ scc.git] DEBUG Already up to date. 2024-09-02 00:44:22,924 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-09-02 00:44:23,233 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-02 00:44:23,233 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-09-02 00:44:23,237 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-09-02 00:44:23,681 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-02 00:44:23,681 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-09-02 00:44:23,685 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-09-02 00:44:23,977 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-02 00:44:23,978 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-09-02 00:44:23,982 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:44:23,982 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:23,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:23,989 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-02 00:44:23,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:24,000 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-02 00:44:24,055 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-09-02 00:44:24,055 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-09-02 00:44:24,055 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-02 00:44:24,055 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-02 00:44:24,055 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-02 00:44:24,056 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-02 00:44:24,062 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-02 00:44:24,068 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-02 00:44:24,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:24,201 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-02 00:44:24,208 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-02 00:44:24,214 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#172](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-09-02 00:44:24,218 [ scc.config] DEBUG Found github.token 2024-09-02 00:44:24,218 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-09-02 00:44:24,218 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-02 00:44:24,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:24,229 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-02 00:44:24,264 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-02 00:44:24,264 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-02 00:44:24,264 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-09-02 00:44:24,264 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-02 00:44:24,265 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-02 00:44:24,271 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-02 00:44:24,278 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-02 00:44:24,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:24,595 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-02 00:44:24,603 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-02 00:44:24,610 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#172](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-09-02 00:44:24,617 [ scc.config] DEBUG Found github.token 2024-09-02 00:44:24,617 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-09-02 00:44:24,617 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-02 00:44:24,623 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:24,629 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-02 00:44:24,645 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:44:24,648 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-09-02 00:44:24,649 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-09-02 00:44:24,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:24,983 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:44:25,023 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:25,024 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:25,030 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:44:25,069 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:44:25,077 [ scc.git] DEBUG has no local changes 2024-09-02 00:44:25,078 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:44:25,086 [ scc.git] DEBUG [detached HEAD 2ca8d47] merge master -Dorg -Ssuccess-only 2024-09-02 00:44:25,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:44:25,087 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:44:25,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-09-02 00:44:25,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-09-02 00:44:26,001 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-02 00:44:26,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-02 00:44:27,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:44:27,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:44:28,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-02 00:44:28,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:44:28,554 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-02 00:44:29,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-09-02 00:44:29,047 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-02 00:44:29,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-02 00:44:30,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:44:30,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:44:31,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-02 00:44:31,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:44:31,482 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-02 00:44:31,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-09-02 00:44:31,920 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-02 00:44:32,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-02 00:44:32,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:44:33,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-02 00:44:33,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-02 00:44:34,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:44:34,247 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-02 00:44:34,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-09-02 00:44:35,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-09-02 00:44:35,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-09-02 00:44:36,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-09-02 00:44:36,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-09-02 00:44:37,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-09-02 00:44:37,070 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:44:37,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-02 00:44:37,071 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:37,071 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:37,078 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:44:37,084 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:44:37,084 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:44:37,090 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:44:37,096 [ scc.git] DEBUG Already up to date. 2024-09-02 00:44:37,097 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-09-02 00:44:37,445 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-02 00:44:37,445 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-09-02 00:44:37,449 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-09-02 00:44:37,734 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-02 00:44:37,734 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-09-02 00:44:37,739 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-09-02 00:44:38,023 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-02 00:44:38,023 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-09-02 00:44:38,027 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:44:38,028 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:38,028 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:38,034 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-02 00:44:38,041 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:38,046 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-02 00:44:38,058 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:44:38,062 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-09-02 00:44:38,062 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-09-02 00:44:38,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:38,212 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-02 00:44:38,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:38,225 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-02 00:44:38,265 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-02 00:44:38,266 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:44:38,269 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-09-02 00:44:38,269 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-09-02 00:44:38,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:38,598 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-02 00:44:38,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:38,609 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-02 00:44:38,621 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-02 00:44:38,621 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:44:38,624 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-09-02 00:44:38,624 [ scc.git] DEBUG package.json | 2 +- 2024-09-02 00:44:38,624 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-09-02 00:44:38,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:38,987 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:44:39,032 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:39,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:39,039 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:44:39,080 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:44:39,088 [ scc.git] DEBUG has no local changes 2024-09-02 00:44:39,089 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:44:39,099 [ scc.git] DEBUG [detached HEAD 4569a99] merge master -Dorg -Ssuccess-only 2024-09-02 00:44:39,100 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:44:39,100 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:44:39,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-09-02 00:44:39,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-09-02 00:44:40,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-02 00:44:40,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:44:41,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-02 00:44:41,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:44:41,692 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-09-02 00:44:41,692 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:44:41,692 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-02 00:44:41,692 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:41,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:41,698 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:44:41,703 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:44:41,703 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:44:41,709 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:44:41,717 [ scc.git] DEBUG Already up to date. 2024-09-02 00:44:41,717 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-02 00:44:42,038 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-09-02 00:44:42,038 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-02 00:44:42,042 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:44:42,042 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:42,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:42,049 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-02 00:44:42,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:42,060 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-02 00:44:42,069 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:44:42,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:42,203 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:44:42,245 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:42,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:42,252 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:44:42,295 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:44:42,302 [ scc.git] DEBUG has no local changes 2024-09-02 00:44:42,302 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:44:42,311 [ scc.git] DEBUG [detached HEAD 57c2765] merge master -Dorg -Ssuccess-only 2024-09-02 00:44:42,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:44:42,311 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:44:42,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-09-02 00:44:43,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-09-02 00:44:43,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-09-02 00:44:44,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-09-02 00:44:44,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-02 00:44:44,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:44:45,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-02 00:44:45,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:44:45,814 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-02 00:44:45,814 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:44:45,814 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-02 00:44:45,814 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:45,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:45,824 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:44:45,830 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:44:45,830 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:44:45,836 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:44:45,842 [ scc.git] DEBUG Already up to date. 2024-09-02 00:44:45,842 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-09-02 00:44:46,168 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-09-02 00:44:46,168 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-09-02 00:44:46,173 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:44:46,173 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:46,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:46,181 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-02 00:44:46,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:46,193 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-02 00:44:46,211 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-09-02 00:44:46,212 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:44:46,215 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-09-02 00:44:46,215 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-09-02 00:44:46,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:46,427 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:44:46,465 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:46,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:46,471 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:44:46,509 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:44:46,516 [ scc.git] DEBUG has no local changes 2024-09-02 00:44:46,516 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:44:46,524 [ scc.git] DEBUG [detached HEAD de51020] merge master -Dorg -Ssuccess-only 2024-09-02 00:44:46,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:44:46,524 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:44:46,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-09-02 00:44:47,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-09-02 00:44:47,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-09-02 00:44:48,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-02 00:44:48,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:44:49,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-02 00:44:49,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:44:49,832 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-02 00:44:49,832 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:44:49,832 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-02 00:44:49,832 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:49,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:49,838 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:44:49,844 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:44:49,844 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:44:49,850 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:44:49,856 [ scc.git] DEBUG Already up to date. 2024-09-02 00:44:49,856 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-02 00:44:50,204 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-09-02 00:44:50,205 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-02 00:44:50,209 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:44:50,210 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:50,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:50,215 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-02 00:44:50,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:50,225 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-02 00:44:50,263 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-09-02 00:44:50,263 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-09-02 00:44:50,263 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-09-02 00:44:50,263 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-09-02 00:44:50,263 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-09-02 00:44:50,263 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-09-02 00:44:50,263 [ scc.git] DEBUG Auto-merging setup.py 2024-09-02 00:44:50,263 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-09-02 00:44:50,263 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-02 00:44:50,264 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-02 00:44:50,271 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-02 00:44:50,277 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-02 00:44:50,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:50,412 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-02 00:44:50,420 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-02 00:44:50,426 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#172](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/consoleText) for more details. Possible conflicts: - Upstream changes - setup.py - omero_signup/views.py - omero_signup/urls.py - omero_signup/signup_settings.py --conflicts 2024-09-02 00:44:50,430 [ scc.config] DEBUG Found github.token 2024-09-02 00:44:50,430 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-09-02 00:44:50,430 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:44:50,471 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:50,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:50,476 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:44:50,517 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:44:50,523 [ scc.git] DEBUG has no local changes 2024-09-02 00:44:50,523 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:44:50,531 [ scc.git] DEBUG [detached HEAD eb20908] merge master -Dorg -Ssuccess-only 2024-09-02 00:44:50,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:44:50,531 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:44:50,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-09-02 00:44:51,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-09-02 00:44:51,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-09-02 00:44:52,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-02 00:44:52,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:44:53,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-02 00:44:53,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:44:53,628 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-02 00:44:53,628 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:44:53,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-02 00:44:53,628 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:53,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:53,634 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:44:53,638 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:44:53,638 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:44:53,643 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:44:53,648 [ scc.git] DEBUG Already up to date. 2024-09-02 00:44:53,649 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-09-02 00:44:53,998 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-09-02 00:44:53,999 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-09-02 00:44:54,004 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:44:54,004 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:54,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:54,009 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-09-02 00:44:54,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:54,020 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-09-02 00:44:54,054 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-02 00:44:54,057 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-09-02 00:44:54,057 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-09-02 00:44:54,058 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-09-02 00:44:54,058 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-09-02 00:44:54,058 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-09-02 00:44:54,058 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-09-02 00:44:54,058 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-09-02 00:44:54,058 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-09-02 00:44:54,058 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-09-02 00:44:54,058 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-09-02 00:44:54,058 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-09-02 00:44:54,058 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-09-02 00:44:54,058 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-09-02 00:44:54,060 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-09-02 00:44:54,060 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-09-02 00:44:54,060 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-09-02 00:44:54,060 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-09-02 00:44:54,060 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-09-02 00:44:54,060 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-09-02 00:44:54,060 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-09-02 00:44:54,060 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-09-02 00:44:54,060 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-09-02 00:44:54,060 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-09-02 00:44:54,060 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-09-02 00:44:54,060 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-09-02 00:44:54,061 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-09-02 00:44:54,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:54,201 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:44:54,240 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:54,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:54,246 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:44:54,282 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:44:54,289 [ scc.git] DEBUG has no local changes 2024-09-02 00:44:54,289 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:44:54,298 [ scc.git] DEBUG [detached HEAD fdaf496] merge master -Dorg -Ssuccess-only 2024-09-02 00:44:54,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:44:54,298 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:44:54,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-09-02 00:44:54,620 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:44:54,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-02 00:44:54,621 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:54,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:54,626 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:44:54,631 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:44:54,631 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:44:54,636 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:44:54,641 [ scc.git] DEBUG Already up to date. 2024-09-02 00:44:54,641 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:44:54,641 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:54,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:54,646 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:44:54,684 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:54,684 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:54,689 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:44:54,728 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:44:54,734 [ scc.git] DEBUG has no local changes 2024-09-02 00:44:54,734 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:44:54,742 [ scc.git] DEBUG [detached HEAD 79b092a] merge master -Dorg -Ssuccess-only 2024-09-02 00:44:54,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:44:54,742 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:44:55,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-09-02 00:44:55,020 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:44:55,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-02 00:44:55,020 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:55,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:55,026 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:44:55,030 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:44:55,030 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:44:55,035 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:44:55,040 [ scc.git] DEBUG Already up to date. 2024-09-02 00:44:55,040 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:44:55,040 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:55,041 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:55,045 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:44:55,084 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:55,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:55,092 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:44:55,133 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:44:55,140 [ scc.git] DEBUG has no local changes 2024-09-02 00:44:55,140 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:44:55,149 [ scc.git] DEBUG [detached HEAD d4a321c] merge master -Dorg -Ssuccess-only 2024-09-02 00:44:55,150 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:44:55,150 [ scc.git] INFO Overriding base-branch from master to main 2024-09-02 00:44:55,150 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:44:55,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-09-02 00:44:55,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-09-02 00:44:56,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-09-02 00:44:56,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-09-02 00:44:57,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-02 00:44:57,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:44:58,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-02 00:44:58,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:44:58,743 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-02 00:44:58,743 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:44:58,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-02 00:44:58,744 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:58,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:58,750 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-09-02 00:44:58,756 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:44:58,756 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-09-02 00:44:58,762 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-09-02 00:44:58,768 [ scc.git] DEBUG Already up to date. 2024-09-02 00:44:58,768 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-09-02 00:44:59,110 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-09-02 00:44:59,111 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-09-02 00:44:59,115 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:44:59,115 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:59,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:59,122 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-02 00:44:59,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:59,132 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-02 00:44:59,166 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-09-02 00:44:59,166 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-09-02 00:44:59,166 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-02 00:44:59,167 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-02 00:44:59,172 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-02 00:44:59,178 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-02 00:44:59,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:44:59,320 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-02 00:44:59,326 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-02 00:44:59,331 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#172](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-09-02 00:44:59,335 [ scc.config] DEBUG Found github.token 2024-09-02 00:44:59,336 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-09-02 00:44:59,336 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:44:59,373 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:59,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:59,378 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:44:59,416 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:44:59,422 [ scc.git] DEBUG has no local changes 2024-09-02 00:44:59,422 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:44:59,430 [ scc.git] DEBUG [detached HEAD 32c384c] merge master -Dorg -Ssuccess-only 2024-09-02 00:44:59,431 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:44:59,431 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:44:59,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-09-02 00:44:59,729 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:44:59,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-02 00:44:59,730 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:59,730 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:59,735 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:44:59,743 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:44:59,744 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:44:59,760 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:44:59,767 [ scc.git] DEBUG Already up to date. 2024-09-02 00:44:59,767 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:44:59,767 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:59,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:59,772 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:44:59,809 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:44:59,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:44:59,814 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:44:59,852 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:44:59,858 [ scc.git] DEBUG has no local changes 2024-09-02 00:44:59,858 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:44:59,865 [ scc.git] DEBUG [detached HEAD 4195ce3] merge master -Dorg -Ssuccess-only 2024-09-02 00:44:59,865 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:44:59,865 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:45:00,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-09-02 00:45:00,135 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:45:00,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-02 00:45:00,136 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:45:00,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:45:00,141 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:45:00,146 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:45:00,146 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:45:00,151 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:45:00,156 [ scc.git] DEBUG Already up to date. 2024-09-02 00:45:00,156 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:45:00,156 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:45:00,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:45:00,162 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:45:00,200 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:45:00,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:45:00,205 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:45:00,242 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:45:00,249 [ scc.git] DEBUG has no local changes 2024-09-02 00:45:00,249 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:45:00,256 [ scc.git] DEBUG [detached HEAD e2cf5b0] merge master -Dorg -Ssuccess-only 2024-09-02 00:45:00,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:00,257 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:45:00,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-09-02 00:45:01,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-09-02 00:45:01,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-09-02 00:45:02,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-02 00:45:02,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:45:02,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-02 00:45:03,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:45:03,362 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-09-02 00:45:03,362 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:45:03,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-02 00:45:03,362 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:45:03,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:45:03,371 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-02 00:45:03,377 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:45:03,377 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-02 00:45:03,384 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-02 00:45:03,391 [ scc.git] DEBUG Already up to date. 2024-09-02 00:45:03,391 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-09-02 00:45:03,753 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-09-02 00:45:03,753 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-09-02 00:45:03,759 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:45:03,759 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:45:03,759 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:45:03,765 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-02 00:45:03,771 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:45:03,778 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-02 00:45:03,862 [ scc.git] DEBUG Auto-merging Dockerfile 2024-09-02 00:45:03,863 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-09-02 00:45:03,863 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-02 00:45:03,863 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-02 00:45:03,871 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-02 00:45:03,881 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-02 00:45:04,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:04,013 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-02 00:45:04,020 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-02 00:45:04,025 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#172](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-09-02 00:45:04,030 [ scc.config] DEBUG Found github.token 2024-09-02 00:45:04,030 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-09-02 00:45:04,030 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:45:04,081 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:45:04,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:45:04,087 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:45:04,130 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:45:04,137 [ scc.git] DEBUG has no local changes 2024-09-02 00:45:04,138 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:45:04,147 [ scc.git] DEBUG [detached HEAD 1b177e8] merge master -Dorg -Ssuccess-only 2024-09-02 00:45:04,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:04,148 [ scc.git] INFO Overriding base-branch from master to develop 2024-09-02 00:45:04,148 [ scc.repo] DEBUG ## PRs found: 2024-09-02 00:45:04,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-09-02 00:45:05,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-09-02 00:45:05,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-09-02 00:45:06,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-09-02 00:45:06,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-09-02 00:45:06,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-09-02 00:45:07,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-09-02 00:45:07,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-02 00:45:08,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-02 00:45:08,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-02 00:45:09,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-09-02 00:45:09,082 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-02 00:45:09,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-09-02 00:45:09,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-09-02 00:45:10,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-09-02 00:45:11,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-09-02 00:45:11,016 [ scc.repo] DEBUG ## Branches found: 2024-09-02 00:45:11,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-02 00:45:11,016 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:45:11,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:45:11,022 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-09-02 00:45:11,027 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-02 00:45:11,027 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-09-02 00:45:11,032 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-09-02 00:45:11,037 [ scc.git] DEBUG Already up to date. 2024-09-02 00:45:11,038 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-09-02 00:45:11,540 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-09-02 00:45:11,540 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-09-02 00:45:11,545 [ scc.git] DEBUG ## Unique users: [] 2024-09-02 00:45:11,546 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:45:11,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:45:11,552 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-02 00:45:11,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:45:11,564 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-02 00:45:11,591 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-09-02 00:45:11,592 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-09-02 00:45:11,592 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-02 00:45:11,592 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-02 00:45:11,600 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-02 00:45:11,609 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-02 00:45:11,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:11,754 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-02 00:45:11,767 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-02 00:45:11,777 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#172](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-09-02 00:45:11,785 [ scc.config] DEBUG Found github.token 2024-09-02 00:45:11,785 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-09-02 00:45:11,785 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-02 00:45:11,840 [ scc.git] DEBUG Get sha1 of %s 2024-09-02 00:45:11,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-02 00:45:11,851 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:45:11,912 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:45:11,936 [ scc.git] DEBUG has no local changes 2024-09-02 00:45:11,936 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:45:11,955 [ scc.git] DEBUG [detached HEAD 9ff23c5] merge master -Dorg -Ssuccess-only 2024-09-02 00:45:11,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:11,955 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-02 00:45:12,080 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-09-02 00:45:12,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:12,255 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-09-02 00:45:12,265 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-09-02 00:45:12,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:12,650 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-09-02 00:45:12,660 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-09-02 00:45:13,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:13,061 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-09-02 00:45:13,069 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-09-02 00:45:13,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:13,484 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-09-02 00:45:13,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:13,867 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-09-02 00:45:13,872 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-09-02 00:45:14,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:14,272 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-09-02 00:45:14,283 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-09-02 00:45:14,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:14,648 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-09-02 00:45:14,656 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-09-02 00:45:15,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:15,139 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-09-02 00:45:15,146 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-09-02 00:45:15,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:15,539 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-09-02 00:45:15,548 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-09-02 00:45:15,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:15,955 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-09-02 00:45:15,961 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-09-02 00:45:16,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:16,360 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-09-02 00:45:16,382 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-09-02 00:45:16,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:16,745 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-09-02 00:45:16,751 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-09-02 00:45:17,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:17,152 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-09-02 00:45:17,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:17,534 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-09-02 00:45:17,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:17,909 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-09-02 00:45:17,917 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-09-02 00:45:18,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:18,311 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-09-02 00:45:18,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:18,678 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-09-02 00:45:19,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:19,050 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-09-02 00:45:19,069 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-09-02 00:45:19,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:19,449 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-09-02 00:45:19,459 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-09-02 00:45:19,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:19,832 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-09-02 00:45:19,841 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-09-02 00:45:20,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:20,225 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-09-02 00:45:20,233 [ scc.config] DEBUG Found submodule.scripts.url 2024-09-02 00:45:20,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-02 00:45:20,627 [ scc.config] DEBUG Found submodule.scripts.branch 2024-09-02 00:45:20,627 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-02 00:45:20,741 [ scc.git] DEBUG has local changes 2024-09-02 00:45:20,742 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 387 dependabot[bot] 'Bump omero-figure from `47f4948` to `cbdd365`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 584 Rdornier 'Link url to image' (user: Rdornier) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 578 Rdornier 'Image outline' (status: failure) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#172 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/172/)' 2024-09-02 00:45:20,758 [ scc.git] DEBUG [detached HEAD c405b92] merge master -Dorg -Ssuccess-only 2024-09-02 00:45:20,758 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-02 00:45:20,759 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-09-02 00:45:20,759 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,759 [ scc.merge] INFO 2024-09-02 00:45:20,759 [ scc.merge] INFO Merged PRs: 2024-09-02 00:45:20,759 [ scc.merge] INFO - PR 387 dependabot[bot] 'Bump omero-figure from `47f4948` to `cbdd365`' 2024-09-02 00:45:20,759 [ scc.merge] INFO 2024-09-02 00:45:20,759 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-09-02 00:45:20,759 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,759 [ scc.merge] INFO 2024-09-02 00:45:20,759 [ scc.merge] INFO Merged PRs: 2024-09-02 00:45:20,759 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-09-02 00:45:20,760 [ scc.merge] INFO 2024-09-02 00:45:20,760 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-09-02 00:45:20,760 [ scc.merge] INFO Excluded PRs: 2024-09-02 00:45:20,760 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-09-02 00:45:20,760 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,760 [ scc.merge] INFO 2024-09-02 00:45:20,760 [ scc.merge] INFO Merged PRs: 2024-09-02 00:45:20,760 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-09-02 00:45:20,760 [ scc.merge] INFO 2024-09-02 00:45:20,760 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-09-02 00:45:20,760 [ scc.merge] INFO Excluded PRs: 2024-09-02 00:45:20,760 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-09-02 00:45:20,760 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-09-02 00:45:20,760 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-09-02 00:45:20,760 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-09-02 00:45:20,760 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,760 [ scc.merge] INFO 2024-09-02 00:45:20,760 [ scc.merge] INFO Merged PRs: 2024-09-02 00:45:20,760 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-09-02 00:45:20,760 [ scc.merge] INFO 2024-09-02 00:45:20,761 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-09-02 00:45:20,761 [ scc.merge] INFO Excluded PRs: 2024-09-02 00:45:20,761 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-02 00:45:20,761 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,761 [ scc.merge] INFO 2024-09-02 00:45:20,761 [ scc.merge] INFO Merged PRs: 2024-09-02 00:45:20,761 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-09-02 00:45:20,761 [ scc.merge] INFO 2024-09-02 00:45:20,761 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-02 00:45:20,761 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-09-02 00:45:20,761 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-02 00:45:20,761 [ scc.merge] INFO 2024-09-02 00:45:20,761 [ scc.merge] INFO Repository: ome/omero-figure 2024-09-02 00:45:20,761 [ scc.merge] INFO Excluded PRs: 2024-09-02 00:45:20,761 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' (user: Rdornier) 2024-09-02 00:45:20,761 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-09-02 00:45:20,761 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' (status: failure) 2024-09-02 00:45:20,761 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-09-02 00:45:20,761 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,761 [ scc.merge] INFO 2024-09-02 00:45:20,761 [ scc.merge] INFO Merged PRs: 2024-09-02 00:45:20,762 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-09-02 00:45:20,762 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-09-02 00:45:20,762 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' 2024-09-02 00:45:20,762 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-02 00:45:20,762 [ scc.merge] INFO - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-02 00:45:20,762 [ scc.merge] INFO 2024-09-02 00:45:20,762 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-02 00:45:20,762 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-09-02 00:45:20,762 [ scc.merge] INFO 2024-09-02 00:45:20,762 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-09-02 00:45:20,762 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,762 [ scc.merge] INFO 2024-09-02 00:45:20,762 [ scc.merge] INFO Merged PRs: 2024-09-02 00:45:20,762 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-09-02 00:45:20,762 [ scc.merge] INFO 2024-09-02 00:45:20,762 [ scc.merge] INFO Repository: ome/omero-gallery 2024-09-02 00:45:20,762 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,762 [ scc.merge] INFO 2024-09-02 00:45:20,762 [ scc.merge] INFO Merged PRs: 2024-09-02 00:45:20,762 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-02 00:45:20,762 [ scc.merge] INFO 2024-09-02 00:45:20,763 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-09-02 00:45:20,763 [ scc.merge] INFO Excluded PRs: 2024-09-02 00:45:20,763 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-09-02 00:45:20,763 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-09-02 00:45:20,763 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-09-02 00:45:20,763 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,763 [ scc.merge] INFO 2024-09-02 00:45:20,763 [ scc.merge] INFO Merged PRs: 2024-09-02 00:45:20,763 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-09-02 00:45:20,763 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-09-02 00:45:20,763 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-02 00:45:20,763 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-02 00:45:20,763 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-02 00:45:20,763 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-02 00:45:20,763 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-02 00:45:20,763 [ scc.merge] INFO 2024-09-02 00:45:20,763 [ scc.merge] INFO Repository: ome/omero-mapr 2024-09-02 00:45:20,763 [ scc.merge] INFO Excluded PRs: 2024-09-02 00:45:20,763 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-09-02 00:45:20,763 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,764 [ scc.merge] INFO 2024-09-02 00:45:20,764 [ scc.merge] INFO Merged PRs: 2024-09-02 00:45:20,764 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-09-02 00:45:20,764 [ scc.merge] INFO 2024-09-02 00:45:20,764 [ scc.merge] INFO Repository: ome/omero-metadata 2024-09-02 00:45:20,764 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,764 [ scc.merge] INFO 2024-09-02 00:45:20,764 [ scc.merge] INFO Merged PRs: 2024-09-02 00:45:20,764 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-09-02 00:45:20,764 [ scc.merge] INFO 2024-09-02 00:45:20,764 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-02 00:45:20,764 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-02 00:45:20,764 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-02 00:45:20,764 [ scc.merge] INFO 2024-09-02 00:45:20,764 [ scc.merge] INFO Repository: ome/omero-parade 2024-09-02 00:45:20,764 [ scc.merge] INFO Excluded PRs: 2024-09-02 00:45:20,764 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-09-02 00:45:20,764 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-09-02 00:45:20,764 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-09-02 00:45:20,764 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,765 [ scc.merge] INFO 2024-09-02 00:45:20,765 [ scc.merge] INFO Merged PRs: 2024-09-02 00:45:20,765 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-02 00:45:20,765 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-02 00:45:20,765 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-02 00:45:20,765 [ scc.merge] INFO 2024-09-02 00:45:20,765 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-09-02 00:45:20,765 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,765 [ scc.merge] INFO 2024-09-02 00:45:20,765 [ scc.merge] INFO Merged PRs: 2024-09-02 00:45:20,765 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-09-02 00:45:20,765 [ scc.merge] INFO 2024-09-02 00:45:20,765 [ scc.merge] INFO Repository: ome/omero-rois 2024-09-02 00:45:20,765 [ scc.merge] INFO Excluded PRs: 2024-09-02 00:45:20,765 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-02 00:45:20,765 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,765 [ scc.merge] INFO 2024-09-02 00:45:20,765 [ scc.merge] INFO Merged PRs: 2024-09-02 00:45:20,765 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-02 00:45:20,765 [ scc.merge] INFO 2024-09-02 00:45:20,765 [ scc.merge] INFO Repository: ome/omero-signup 2024-09-02 00:45:20,765 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,766 [ scc.merge] INFO 2024-09-02 00:45:20,766 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-02 00:45:20,766 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-02 00:45:20,766 [ scc.merge] INFO 2024-09-02 00:45:20,766 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-09-02 00:45:20,766 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,766 [ scc.merge] INFO 2024-09-02 00:45:20,766 [ scc.merge] INFO Merged PRs: 2024-09-02 00:45:20,766 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-02 00:45:20,766 [ scc.merge] INFO 2024-09-02 00:45:20,766 [ scc.merge] INFO Repository: ome/omero-upload 2024-09-02 00:45:20,766 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,766 [ scc.merge] INFO 2024-09-02 00:45:20,766 [ scc.merge] INFO 2024-09-02 00:45:20,766 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-09-02 00:45:20,766 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,766 [ scc.merge] INFO 2024-09-02 00:45:20,766 [ scc.merge] INFO 2024-09-02 00:45:20,766 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-09-02 00:45:20,766 [ scc.merge] INFO Excluded PRs: 2024-09-02 00:45:20,766 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-09-02 00:45:20,766 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,766 [ scc.merge] INFO 2024-09-02 00:45:20,766 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-02 00:45:20,767 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-02 00:45:20,767 [ scc.merge] INFO 2024-09-02 00:45:20,767 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-09-02 00:45:20,767 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,767 [ scc.merge] INFO 2024-09-02 00:45:20,767 [ scc.merge] INFO 2024-09-02 00:45:20,767 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-09-02 00:45:20,767 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,767 [ scc.merge] INFO 2024-09-02 00:45:20,767 [ scc.merge] INFO 2024-09-02 00:45:20,767 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-09-02 00:45:20,767 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,767 [ scc.merge] INFO 2024-09-02 00:45:20,767 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-02 00:45:20,767 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-09-02 00:45:20,767 [ scc.merge] INFO 2024-09-02 00:45:20,767 [ scc.merge] INFO Repository: ome/scripts 2024-09-02 00:45:20,767 [ scc.merge] INFO Excluded PRs: 2024-09-02 00:45:20,767 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-09-02 00:45:20,767 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-09-02 00:45:20,767 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-09-02 00:45:20,767 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-09-02 00:45:20,767 [ scc.merge] INFO Already up to date. 2024-09-02 00:45:20,768 [ scc.merge] INFO 2024-09-02 00:45:20,768 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-02 00:45:20,768 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-02 00:45:20,768 [ scc.merge] INFO 2024-09-02 00:45:20,768 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-02 00:45:20,768 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,776 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-02 00:45:20,776 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-02 00:45:20,781 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,786 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,786 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-02 00:45:20,786 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-02 00:45:20,791 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,795 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-02 00:45:20,796 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,800 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-02 00:45:20,801 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-02 00:45:20,806 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,815 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,816 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-02 00:45:20,816 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-02 00:45:20,824 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,832 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,832 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-02 00:45:20,832 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-02 00:45:20,840 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-02 00:45:20,847 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-02 00:45:20,856 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-02 00:45:20,863 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-02 00:45:20,872 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-02 00:45:20,881 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-02 00:45:20,889 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-02 00:45:20,898 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,907 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-02 00:45:20,907 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,922 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,922 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-02 00:45:20,922 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-02 00:45:20,932 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-02 00:45:20,940 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-02 00:45:20,940 [ scc.git] DEBUG Calling 'git remote' 2024-09-02 00:45:20,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.3-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 6cbded5] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from cbdd3657 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD e06bcc6] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-02 00:46:08,604 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-02 00:46:17,325 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-02 00:46:19,699 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-02 00:46:24,318 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-02 00:47:02,934 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS