Started by upstream project "Trigger" build number 208 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 180 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.8-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.8-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.3.2 cryptography-43.0.1 future-1.0.0 idna-3.8 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-09-12 00:42:24,699 [ scc.config] DEBUG Found github.token 2024-09-12 00:42:24,702 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-12 00:42:24,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:42:25,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:42:25,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-12 00:42:25,746 [ scc.gh] DEBUG 4064 remaining from 5000 (Reset at 01:09 2024-09-12 00:42:25,747 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:42:25,752 [ scc.git] DEBUG Check current status 2024-09-12 00:42:25,752 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:42:25,756 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-12 00:42:25,756 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:42:25,812 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-12 00:42:25,816 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-12 00:42:25,821 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-12 00:42:25,825 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-12 00:42:25,829 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-12 00:42:25,832 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-12 00:42:25,835 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-12 00:42:25,848 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-12 00:42:25,851 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-12 00:42:25,855 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-12 00:42:25,857 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-12 00:42:25,860 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-12 00:42:25,864 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-12 00:42:25,866 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-12 00:42:25,913 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-12 00:42:25,916 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-12 00:42:25,919 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-12 00:42:25,922 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-12 00:42:25,925 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-12 00:42:25,928 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-12 00:42:25,931 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-12 00:42:25,935 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-12 00:42:25,940 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:42:26,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-12 00:42:26,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:42:27,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:42:27,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:42:27,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:42:27,994 [ scc.git] DEBUG Resetting... 2024-09-12 00:42:27,994 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-12 00:42:28,004 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-12 00:42:28,004 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-12 00:42:28,114 [ scc.git] DEBUG Check current status 2024-09-12 00:42:28,114 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:42:28,119 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-12 00:42:28,119 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:42:28,167 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-12 00:42:28,170 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-12 00:42:28,175 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-12 00:42:28,178 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-12 00:42:28,182 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-12 00:42:28,185 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-12 00:42:28,187 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-12 00:42:28,191 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-12 00:42:28,193 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-12 00:42:28,196 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-12 00:42:28,199 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-12 00:42:28,201 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-12 00:42:28,204 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-12 00:42:28,207 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-12 00:42:28,210 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-12 00:42:28,213 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-12 00:42:28,215 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-12 00:42:28,217 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-12 00:42:28,220 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-12 00:42:28,223 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-12 00:42:28,225 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-12 00:42:28,229 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-12 00:42:28,230 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-12 00:42:28,230 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-12 00:42:28,230 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-12 00:42:28,230 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-12 00:42:28,230 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-12 00:42:28,230 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:42:28,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-12 00:42:28,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/390 HTTP/1.1" 200 None 2024-09-12 00:42:28,904 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-12 00:42:28,904 [ scc.repo] DEBUG - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-12 00:42:28,904 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:42:28,905 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:42:28,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:42:28,909 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:42:28,913 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:42:28,913 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:42:28,918 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:42:28,923 [ scc.git] DEBUG Already up to date. 2024-09-12 00:42:28,923 [ scc.git] DEBUG Calling 'git fetch origin pull/390/head' 2024-09-12 00:42:29,247 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-12 00:42:29,247 [ scc.git] DEBUG * branch refs/pull/390/head -> FETCH_HEAD 2024-09-12 00:42:29,252 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:42:29,252 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:42:29,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:42:29,257 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-12 00:42:29,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:42:29,265 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 390 (Bump omero-figure from `5f62399` to `f9a321d`) 89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-12 00:42:29,282 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:42:29,285 [ scc.git] DEBUG omero-figure | 2 +- 2024-09-12 00:42:29,285 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-12 00:42:29,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:42:29,419 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:42:29,515 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53' 2024-09-12 00:42:29,516 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:42:29,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:42:29,520 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:42:31,932 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59750c2e50> has no local changes 2024-09-12 00:42:31,932 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:42:32,005 [ scc.git] DEBUG [detached HEAD 21a8b13] merge master -Dorg -Snone 2024-09-12 00:42:32,005 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-12 00:42:32,005 [ scc.merge] INFO Already up to date. 2024-09-12 00:42:32,005 [ scc.merge] INFO 2024-09-12 00:42:32,005 [ scc.merge] INFO Merged PRs: 2024-09-12 00:42:32,006 [ scc.merge] INFO - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-12 00:42:32,006 [ scc.merge] INFO 2024-09-12 00:42:32,006 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-12 00:42:32,006 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-09-12 00:42:40,229 [ scc.config] DEBUG Found github.token 2024-09-12 00:42:40,232 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-12 00:42:40,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:42:40,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:42:41,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-12 00:42:41,177 [ scc.gh] DEBUG 4054 remaining from 5000 (Reset at 01:09 2024-09-12 00:42:41,178 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:42:41,183 [ scc.git] DEBUG Check current status 2024-09-12 00:42:41,184 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:42:41,188 [ scc.git] DEBUG 21a8b13 merge master -Dorg -Snone 2024-09-12 00:42:41,189 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:42:41,243 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-12 00:42:41,247 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-12 00:42:41,250 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-12 00:42:41,254 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-12 00:42:43,667 [ scc.git] DEBUG f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 omero-figure (v7.1.0-23-gf9a321dd) 2024-09-12 00:42:43,672 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-12 00:42:43,677 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-12 00:42:43,681 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-12 00:42:43,686 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-12 00:42:43,690 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-12 00:42:43,694 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-12 00:42:43,699 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-12 00:42:43,703 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-12 00:42:43,707 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-12 00:42:43,711 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-12 00:42:43,715 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-12 00:42:43,718 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-12 00:42:43,721 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-12 00:42:43,725 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-12 00:42:43,728 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-12 00:42:43,732 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-12 00:42:43,736 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-12 00:42:43,742 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:42:43,743 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-09-12 00:42:43,746 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-09-12 00:42:43,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-12 00:42:44,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:42:44,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:42:45,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:42:45,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:42:45,629 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:42:45,719 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-12 00:42:45,719 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:42:45,723 [ scc.git] DEBUG Check current status 2024-09-12 00:42:45,723 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:42:45,728 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-09-12 00:42:45,728 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:42:45,780 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:42:46,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-09-12 00:42:46,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:42:46,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:42:47,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:42:47,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:42:47,761 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:42:47,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:42:47,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-12 00:42:47,809 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:42:47,815 [ scc.git] DEBUG Check current status 2024-09-12 00:42:47,815 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:42:47,820 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-09-12 00:42:47,820 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:42:47,867 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:42:48,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-09-12 00:42:48,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:42:49,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:42:49,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:42:49,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:42:49,965 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:42:50,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:42:50,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-12 00:42:50,011 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:42:50,017 [ scc.git] DEBUG Check current status 2024-09-12 00:42:50,017 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:42:50,022 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-09-12 00:42:50,022 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:42:50,068 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:42:50,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-09-12 00:42:50,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:42:51,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:42:51,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:42:52,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:42:52,078 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:42:52,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:42:52,136 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-12 00:42:52,136 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:42:52,142 [ scc.git] DEBUG Check current status 2024-09-12 00:42:52,142 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:42:52,147 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-12 00:42:52,148 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:42:52,204 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:42:52,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-09-12 00:42:52,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:42:53,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:42:53,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:42:54,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:42:54,195 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:42:54,247 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:42:54,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-12 00:42:54,248 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:42:54,255 [ scc.git] DEBUG Check current status 2024-09-12 00:42:54,255 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:42:54,301 [ scc.git] DEBUG f9a321dd Merge pull request #549 from will-moore/inset_feature 2024-09-12 00:42:54,302 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:42:54,354 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:42:54,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-09-12 00:42:55,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:42:55,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:42:55,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:42:56,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:42:56,290 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:42:56,340 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:42:56,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-12 00:42:56,341 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:42:56,346 [ scc.git] DEBUG Check current status 2024-09-12 00:42:56,346 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:42:56,350 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-12 00:42:56,351 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:42:56,407 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:42:56,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-09-12 00:42:57,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:42:57,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:42:57,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:42:58,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:42:58,402 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:42:58,445 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:42:58,445 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-12 00:42:58,446 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:42:58,450 [ scc.git] DEBUG Check current status 2024-09-12 00:42:58,450 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:42:58,455 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-09-12 00:42:58,455 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:42:58,504 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:42:58,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-09-12 00:42:59,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:42:59,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:43:00,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:43:00,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:43:00,610 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:00,657 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:00,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-12 00:43:00,658 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:43:00,664 [ scc.git] DEBUG Check current status 2024-09-12 00:43:00,664 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:43:00,671 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-09-12 00:43:00,671 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:43:00,720 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:43:01,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-09-12 00:43:01,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:43:01,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:43:02,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:43:02,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:43:02,820 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:02,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:02,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-12 00:43:02,868 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:43:02,873 [ scc.git] DEBUG Check current status 2024-09-12 00:43:02,873 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:43:02,878 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-09-12 00:43:02,878 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:43:02,924 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:43:03,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-09-12 00:43:03,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:43:04,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:43:04,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:43:04,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:43:04,990 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:05,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:05,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-12 00:43:05,042 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:43:05,048 [ scc.git] DEBUG Check current status 2024-09-12 00:43:05,049 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:43:05,055 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-12 00:43:05,056 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:43:05,113 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:43:05,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-09-12 00:43:05,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:43:06,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:43:06,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:43:07,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:43:07,074 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:07,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:07,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-12 00:43:07,120 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:43:07,125 [ scc.git] DEBUG Check current status 2024-09-12 00:43:07,125 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:43:07,129 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-09-12 00:43:07,129 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:43:07,174 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:43:07,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-09-12 00:43:07,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:43:08,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:43:08,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:43:09,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:43:09,204 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:09,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:09,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-12 00:43:09,255 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:43:09,262 [ scc.git] DEBUG Check current status 2024-09-12 00:43:09,262 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:43:09,268 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-09-12 00:43:09,269 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:43:09,319 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:43:09,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-09-12 00:43:10,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:43:10,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:43:10,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:43:11,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:43:11,351 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:11,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:11,414 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-12 00:43:11,414 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:43:11,424 [ scc.git] DEBUG Check current status 2024-09-12 00:43:11,425 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:43:11,432 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-09-12 00:43:11,433 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:43:11,507 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:43:11,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-09-12 00:43:12,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:43:12,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:43:13,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:43:13,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:43:13,541 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:13,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:13,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-12 00:43:13,601 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:43:13,608 [ scc.git] DEBUG Check current status 2024-09-12 00:43:13,609 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:43:13,615 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-12 00:43:13,615 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:43:13,672 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:43:14,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-09-12 00:43:14,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:43:14,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:43:15,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:43:15,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:43:15,703 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:15,763 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:15,765 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-12 00:43:15,765 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:43:15,771 [ scc.git] DEBUG Check current status 2024-09-12 00:43:15,771 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:43:15,779 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-09-12 00:43:15,779 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:43:15,851 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:43:16,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-12 00:43:16,111 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-12 00:43:16,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-09-12 00:43:16,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:43:17,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:43:17,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:43:17,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:43:17,964 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:18,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:18,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-12 00:43:18,011 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:43:18,021 [ scc.git] DEBUG Check current status 2024-09-12 00:43:18,022 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:43:18,029 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-09-12 00:43:18,029 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:43:18,088 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:43:18,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-09-12 00:43:18,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:43:19,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:43:19,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:43:20,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:43:20,152 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:20,199 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:20,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-12 00:43:20,201 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:43:20,208 [ scc.git] DEBUG Check current status 2024-09-12 00:43:20,208 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:43:20,213 [ scc.git] DEBUG deab817 update setup-python to v4 2024-09-12 00:43:20,214 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:43:20,264 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:43:20,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-09-12 00:43:21,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:43:21,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:43:21,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:43:22,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:43:22,331 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:22,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:22,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-12 00:43:22,392 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:43:22,402 [ scc.git] DEBUG Check current status 2024-09-12 00:43:22,402 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:43:22,410 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-12 00:43:22,410 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:43:22,473 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:43:22,475 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-09-12 00:43:22,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-09-12 00:43:23,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:43:23,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:43:24,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:43:24,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:43:24,419 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:24,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:24,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-12 00:43:24,471 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:43:24,477 [ scc.git] DEBUG Check current status 2024-09-12 00:43:24,477 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:43:24,483 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-12 00:43:24,484 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:43:24,536 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:43:24,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-12 00:43:24,819 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-12 00:43:25,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-09-12 00:43:25,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:43:25,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:43:26,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:43:26,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:43:26,716 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:26,775 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:26,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-12 00:43:26,777 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:43:26,787 [ scc.git] DEBUG Check current status 2024-09-12 00:43:26,787 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:43:26,794 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-09-12 00:43:26,795 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:43:26,848 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:43:27,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-12 00:43:27,123 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-12 00:43:27,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-09-12 00:43:27,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:43:28,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:43:28,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:43:29,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:43:29,070 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:29,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:29,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-12 00:43:29,127 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:43:29,134 [ scc.git] DEBUG Check current status 2024-09-12 00:43:29,134 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:43:29,140 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-12 00:43:29,140 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:43:29,200 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:43:29,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-09-12 00:43:29,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:43:30,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:43:30,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:43:31,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:43:31,212 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:31,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:31,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-12 00:43:31,267 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-12 00:43:31,276 [ scc.git] DEBUG Check current status 2024-09-12 00:43:31,276 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:43:31,328 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-12 00:43:31,328 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:43:31,384 [ scc.config] DEBUG Found remote.origin.url 2024-09-12 00:43:31,385 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-09-12 00:43:31,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-12 00:43:31,610 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-12 00:43:31,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-09-12 00:43:32,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-12 00:43:32,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-12 00:43:33,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-12 00:43:33,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-12 00:43:33,507 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:33,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:33,565 [ scc.git] DEBUG Resetting... 2024-09-12 00:43:33,565 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-12 00:43:33,578 [ scc.git] DEBUG HEAD is now at 21a8b13 merge master -Dorg -Snone 2024-09-12 00:43:33,578 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-12 00:43:33,732 [ scc.git] DEBUG Check current status 2024-09-12 00:43:33,732 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-12 00:43:33,741 [ scc.git] DEBUG 21a8b13 merge master -Dorg -Snone 2024-09-12 00:43:33,742 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-12 00:43:33,807 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-12 00:43:33,811 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-12 00:43:33,815 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-12 00:43:33,819 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-12 00:43:33,831 [ scc.git] DEBUG f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 omero-figure (v7.1.0-23-gf9a321dd) 2024-09-12 00:43:33,835 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-12 00:43:33,839 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-12 00:43:33,848 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-12 00:43:33,852 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-12 00:43:33,856 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-12 00:43:33,860 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-12 00:43:33,863 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-12 00:43:33,867 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-12 00:43:33,871 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-12 00:43:33,875 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-12 00:43:33,879 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-12 00:43:33,882 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-12 00:43:33,885 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-12 00:43:33,890 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-12 00:43:33,894 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-12 00:43:33,897 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-12 00:43:33,902 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-12 00:43:33,903 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-12 00:43:33,904 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-12 00:43:33,904 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-12 00:43:33,904 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-12 00:43:33,904 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-12 00:43:33,904 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-09-12 00:43:33,904 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:43:34,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-12 00:43:34,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/390 HTTP/1.1" 200 None 2024-09-12 00:43:34,631 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-12 00:43:35,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518 HTTP/1.1" 200 None 2024-09-12 00:43:35,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:43:36,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518 HTTP/1.1" 200 None 2024-09-12 00:43:36,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:43:36,555 [ scc.repo] DEBUG - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-12 00:43:36,555 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:43:36,555 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:43:36,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:43:36,563 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:43:36,568 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:43:36,568 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:43:36,574 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:43:36,580 [ scc.git] DEBUG Already up to date. 2024-09-12 00:43:36,581 [ scc.git] DEBUG Calling 'git fetch origin pull/390/head' 2024-09-12 00:43:36,929 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-12 00:43:36,930 [ scc.git] DEBUG * branch refs/pull/390/head -> FETCH_HEAD 2024-09-12 00:43:36,938 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:43:36,938 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:43:36,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:43:36,944 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-12 00:43:36,952 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:43:36,959 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 390 (Bump omero-figure from `5f62399` to `f9a321d`) 89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-12 00:43:36,964 [ scc.git] DEBUG Already up to date. 2024-09-12 00:43:37,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:43:37,097 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:43:37,176 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:43:37,177 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:43:37,187 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:43:37,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-09-12 00:43:38,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-09-12 00:43:38,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-12 00:43:39,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:43:39,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:43:40,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-12 00:43:40,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:43:40,435 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-09-12 00:43:40,435 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:43:40,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-12 00:43:40,435 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:43:40,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:43:40,443 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:43:40,449 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:43:40,450 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:43:40,456 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:43:40,464 [ scc.git] DEBUG Already up to date. 2024-09-12 00:43:40,464 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-09-12 00:43:40,905 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-09-12 00:43:40,905 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-09-12 00:43:40,911 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:43:40,912 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:43:40,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:43:40,919 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-12 00:43:40,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:43:40,933 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-12 00:43:41,006 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:43:41,010 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-09-12 00:43:41,010 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-09-12 00:43:41,010 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-09-12 00:43:41,010 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-09-12 00:43:41,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:43:41,152 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:43:41,200 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:43:41,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:43:41,208 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:41,258 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:43:41,265 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b6646760> has no local changes 2024-09-12 00:43:41,266 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:43:41,276 [ scc.git] DEBUG [detached HEAD e1e1682] merge master -Dorg -Ssuccess-only 2024-09-12 00:43:41,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:41,277 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:43:41,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-09-12 00:43:42,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-09-12 00:43:42,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-09-12 00:43:43,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-12 00:43:43,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:43:44,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:43:44,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-12 00:43:45,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:43:45,230 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-09-12 00:43:45,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-09-12 00:43:46,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-09-12 00:43:46,171 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:43:46,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-12 00:43:46,171 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:43:46,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:43:46,179 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:43:46,185 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:43:46,185 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:43:46,192 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:43:46,200 [ scc.git] DEBUG Already up to date. 2024-09-12 00:43:46,200 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-09-12 00:43:46,532 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-09-12 00:43:46,533 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-09-12 00:43:46,540 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:43:46,540 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:43:46,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:43:46,547 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-12 00:43:46,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:43:46,561 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-12 00:43:46,573 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:43:46,576 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-09-12 00:43:46,576 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-09-12 00:43:46,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:43:46,710 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:43:46,758 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:43:46,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:43:46,765 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:46,814 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:43:46,822 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b5572b80> has no local changes 2024-09-12 00:43:46,822 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:43:46,833 [ scc.git] DEBUG [detached HEAD 41d76f4] merge master -Dorg -Ssuccess-only 2024-09-12 00:43:46,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:46,834 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:43:47,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-09-12 00:43:47,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-09-12 00:43:48,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-09-12 00:43:48,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-09-12 00:43:49,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-09-12 00:43:49,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-12 00:43:50,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:43:50,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-12 00:43:50,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:43:50,977 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-09-12 00:43:51,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-09-12 00:43:51,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-09-12 00:43:52,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-09-12 00:43:52,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-09-12 00:43:53,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-09-12 00:43:53,200 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:43:53,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-12 00:43:53,200 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:43:53,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:43:53,209 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:43:53,215 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:43:53,215 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:43:53,221 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:43:53,228 [ scc.git] DEBUG Already up to date. 2024-09-12 00:43:53,228 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-09-12 00:43:53,900 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-09-12 00:43:53,900 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-09-12 00:43:53,906 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:43:53,906 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:43:53,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:43:53,913 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-12 00:43:53,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:43:53,926 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-12 00:43:54,006 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-09-12 00:43:54,008 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:43:54,011 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-09-12 00:43:54,012 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-09-12 00:43:54,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:43:54,152 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:43:54,198 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:43:54,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:43:54,205 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:43:54,249 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:43:54,256 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b6646b50> has no local changes 2024-09-12 00:43:54,256 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:43:54,267 [ scc.git] DEBUG [detached HEAD 1a3c8b0] merge master -Dorg -Ssuccess-only 2024-09-12 00:43:54,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:43:54,267 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:43:54,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-09-12 00:43:55,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-09-12 00:43:55,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-09-12 00:43:56,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-09-12 00:43:56,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-12 00:43:57,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:43:57,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:43:57,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-12 00:43:58,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-09-12 00:43:58,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-12 00:43:59,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-09-12 00:43:59,251 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-09-12 00:43:59,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-09-12 00:44:00,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-09-12 00:44:00,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-09-12 00:44:01,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-12 00:44:01,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:44:02,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-12 00:44:02,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:44:02,600 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-12 00:44:03,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-09-12 00:44:03,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-09-12 00:44:04,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-12 00:44:04,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:44:05,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-12 00:44:05,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:44:05,517 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-09-12 00:44:05,517 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:44:05,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-12 00:44:05,518 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:44:05,518 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:05,524 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:44:05,529 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:44:05,529 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:44:05,535 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:44:05,541 [ scc.git] DEBUG Already up to date. 2024-09-12 00:44:05,541 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-09-12 00:44:05,910 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-12 00:44:05,911 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-09-12 00:44:05,916 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-09-12 00:44:06,328 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-12 00:44:06,328 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-09-12 00:44:06,335 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-09-12 00:44:06,802 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-12 00:44:06,802 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-09-12 00:44:06,808 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:44:06,808 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:44:06,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:06,814 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-12 00:44:06,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:06,828 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-12 00:44:06,868 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-12 00:44:06,868 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-12 00:44:06,868 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-12 00:44:06,868 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-12 00:44:06,869 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-12 00:44:06,875 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-12 00:44:06,882 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-12 00:44:07,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:44:07,025 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-12 00:44:07,035 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-12 00:44:07,041 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#182](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-09-12 00:44:07,047 [ scc.config] DEBUG Found github.token 2024-09-12 00:44:07,047 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-09-12 00:44:07,047 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-12 00:44:07,057 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:07,064 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-12 00:44:07,083 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-09-12 00:44:07,083 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-09-12 00:44:07,083 [ scc.git] DEBUG Auto-merging setup.py 2024-09-12 00:44:07,083 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-12 00:44:07,083 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-12 00:44:07,083 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-12 00:44:07,083 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-09-12 00:44:07,083 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-12 00:44:07,084 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-12 00:44:07,092 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-12 00:44:07,100 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-12 00:44:07,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:44:07,459 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-12 00:44:07,468 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-12 00:44:07,474 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#182](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-09-12 00:44:07,480 [ scc.config] DEBUG Found github.token 2024-09-12 00:44:07,480 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-09-12 00:44:07,480 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-12 00:44:07,487 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:07,492 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-12 00:44:07,508 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-09-12 00:44:07,508 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-12 00:44:07,508 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:44:07,512 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-09-12 00:44:07,512 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-09-12 00:44:07,512 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-09-12 00:44:07,512 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-09-12 00:44:07,512 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-09-12 00:44:07,512 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-09-12 00:44:07,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:44:07,864 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:44:07,915 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:44:07,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:07,921 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:44:07,962 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:44:07,968 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b553e2e0> has no local changes 2024-09-12 00:44:07,969 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:44:07,978 [ scc.git] DEBUG [detached HEAD 2231f22] merge master -Dorg -Ssuccess-only 2024-09-12 00:44:07,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:44:07,979 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:44:08,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-09-12 00:44:08,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-09-12 00:44:09,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-09-12 00:44:09,361 [ scc.repo] DEBUG # ... Include label: include 2024-09-12 00:44:09,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8 HTTP/1.1" 200 None 2024-09-12 00:44:10,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:44:10,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:44:11,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8 HTTP/1.1" 200 None 2024-09-12 00:44:11,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15d28a393f071234c3a7355829cbc9a4521246f8?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:44:11,907 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-09-12 00:44:12,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583 HTTP/1.1" 200 None 2024-09-12 00:44:12,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583/comments HTTP/1.1" 200 None 2024-09-12 00:44:12,830 [ scc.repo] DEBUG # ... Include label: include 2024-09-12 00:44:13,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47 HTTP/1.1" 200 None 2024-09-12 00:44:13,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:44:14,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:44:14,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47 HTTP/1.1" 200 None 2024-09-12 00:44:15,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b47792851e0427c1d5fc7ba778783b8e09e21f47?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:44:15,199 [ scc.repo] DEBUG - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-12 00:44:15,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-09-12 00:44:16,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-09-12 00:44:16,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-09-12 00:44:16,660 [ scc.repo] DEBUG # ... Include label: include 2024-09-12 00:44:17,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfcbf359daa80eb4f4824f16c1d57e8db959672d HTTP/1.1" 200 None 2024-09-12 00:44:17,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfcbf359daa80eb4f4824f16c1d57e8db959672d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:44:18,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfcbf359daa80eb4f4824f16c1d57e8db959672d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:44:18,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfcbf359daa80eb4f4824f16c1d57e8db959672d HTTP/1.1" 200 None 2024-09-12 00:44:19,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/cfcbf359daa80eb4f4824f16c1d57e8db959672d?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:44:19,043 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-09-12 00:44:19,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-09-12 00:44:20,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-09-12 00:44:20,005 [ scc.repo] DEBUG # ... Include label: include 2024-09-12 00:44:20,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7 HTTP/1.1" 200 None 2024-09-12 00:44:20,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:44:21,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:44:21,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7 HTTP/1.1" 200 None 2024-09-12 00:44:22,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/05cc29816c5dc4252e0704936ab7463bd719dab7?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:44:22,404 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-09-12 00:44:22,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-09-12 00:44:23,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-09-12 00:44:23,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-12 00:44:24,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:44:24,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:44:25,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-12 00:44:25,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:44:25,626 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-12 00:44:26,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-09-12 00:44:26,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-09-12 00:44:27,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-09-12 00:44:27,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:44:27,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:44:28,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-09-12 00:44:28,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:44:28,763 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-09-12 00:44:28,764 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:44:28,764 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-12 00:44:28,764 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:44:28,765 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:28,771 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:44:28,777 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:44:28,778 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:44:28,785 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:44:28,792 [ scc.git] DEBUG Already up to date. 2024-09-12 00:44:28,792 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-09-12 00:44:29,115 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-12 00:44:29,116 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-09-12 00:44:29,121 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-09-12 00:44:29,406 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-12 00:44:29,407 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-09-12 00:44:29,413 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-09-12 00:44:30,284 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-12 00:44:30,284 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-09-12 00:44:30,290 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-09-12 00:44:30,659 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-12 00:44:30,659 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-09-12 00:44:30,665 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head' 2024-09-12 00:44:31,056 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-12 00:44:31,057 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD 2024-09-12 00:44:31,062 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-09-12 00:44:31,354 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-12 00:44:31,354 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-09-12 00:44:31,359 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:44:31,359 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:44:31,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:31,366 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-09-12 00:44:31,374 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:31,379 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-09-12 00:44:31,892 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-12 00:44:31,893 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-12 00:44:31,893 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-12 00:44:31,893 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-09-12 00:44:31,893 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-12 00:44:31,893 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:44:31,900 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-09-12 00:44:31,900 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-09-12 00:44:31,900 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-09-12 00:44:31,900 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-09-12 00:44:31,900 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-09-12 00:44:31,900 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-09-12 00:44:31,900 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-09-12 00:44:31,900 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-09-12 00:44:31,900 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-09-12 00:44:31,900 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-09-12 00:44:31,900 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-09-12 00:44:31,900 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-09-12 00:44:32,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:44:32,041 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-12 00:44:32,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:32,068 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-12 00:44:32,100 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:44:32,104 [ scc.git] DEBUG setup.py | 2 +- 2024-09-12 00:44:32,104 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-12 00:44:32,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:44:32,416 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-12 00:44:32,426 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:32,431 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-12 00:44:32,991 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-12 00:44:32,991 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-12 00:44:32,991 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-12 00:44:32,991 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2024-09-12 00:44:32,991 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-12 00:44:32,991 [ scc.git] DEBUG Auto-merging src/templates/shapes/shape_toolbar.template.html 2024-09-12 00:44:32,991 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-12 00:44:32,992 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-12 00:44:33,000 [ scc.git] DEBUG Calling 'git reset --hard 88c7c0df55bb8c06e0699d12b46c703695361dc6' 2024-09-12 00:44:33,011 [ scc.git] DEBUG HEAD is now at 88c7c0df merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 2024-09-12 00:44:33,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:44:33,185 [ scc.git] DEBUG Calling 'git merge-base f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-12 00:44:33,193 [ scc.git] DEBUG Calling 'git diff --name-only f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53..f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53' 2024-09-12 00:44:33,199 [ scc.git] INFO - PR 577 Rdornier 'Fill rois' Conflicting PR. Removed from build [OMERO-plugins-push#182](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/consoleText) for more details. Possible conflicts: - PR #555 will-moore 'Points in shape editor' - omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py --conflicts 2024-09-12 00:44:33,204 [ scc.config] DEBUG Found github.token 2024-09-12 00:44:33,204 [ scc.git] DEBUG Adding comment to issue #577. 2024-09-12 00:44:33,914 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 201 2024 2024-09-12 00:44:33,916 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cfcbf359daa80eb4f4824f16c1d57e8db959672d' 2024-09-12 00:44:33,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:33,931 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) cfcbf359daa80eb4f4824f16c1d57e8db959672d' 2024-09-12 00:44:34,204 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-12 00:44:34,204 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-12 00:44:34,204 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-12 00:44:34,205 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:44:34,212 [ scc.git] DEBUG .gitignore | 2 + 2024-09-12 00:44:34,212 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-09-12 00:44:34,212 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-09-12 00:44:34,212 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-09-12 00:44:34,212 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-09-12 00:44:34,212 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-09-12 00:44:34,212 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 1 - 2024-09-12 00:44:34,212 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-09-12 00:44:34,212 [ scc.git] DEBUG 8 files changed, 363 insertions(+), 80 deletions(-) 2024-09-12 00:44:34,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:44:34,355 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b47792851e0427c1d5fc7ba778783b8e09e21f47' 2024-09-12 00:44:34,366 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:34,372 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Add Hilo Checkbox for LUT Toggling in Channel Slider View) b47792851e0427c1d5fc7ba778783b8e09e21f47' 2024-09-12 00:44:34,691 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-12 00:44:34,693 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:44:34,699 [ scc.git] DEBUG src/js/models/panel_model.js | 10 +++++++++ 2024-09-12 00:44:34,699 [ scc.git] DEBUG src/js/models/undo.js | 3 ++- 2024-09-12 00:44:34,699 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 42 +++++++++++++++++++++++++++++++++--- 2024-09-12 00:44:34,699 [ scc.git] DEBUG src/templates/checkbox_template.html | 4 ++++ 2024-09-12 00:44:34,699 [ scc.git] DEBUG 4 files changed, 55 insertions(+), 4 deletions(-) 2024-09-12 00:44:34,700 [ scc.git] DEBUG create mode 100644 src/templates/checkbox_template.html 2024-09-12 00:44:34,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:44:34,844 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15d28a393f071234c3a7355829cbc9a4521246f8' 2024-09-12 00:44:34,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:34,859 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) 15d28a393f071234c3a7355829cbc9a4521246f8' 2024-09-12 00:44:34,879 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:44:34,884 [ scc.git] DEBUG omero_figure/views.py | 130 ++++++++++++++++++++++++++++++++++++------ 2024-09-12 00:44:34,884 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-09-12 00:44:34,884 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-09-12 00:44:34,884 [ scc.git] DEBUG 3 files changed, 124 insertions(+), 26 deletions(-) 2024-09-12 00:44:35,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:44:35,267 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:44:35,307 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:44:35,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:35,313 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:44:35,358 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:44:35,368 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b44d4a90> has no local changes 2024-09-12 00:44:35,368 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:44:35,381 [ scc.git] DEBUG [detached HEAD 2cbda4ba] merge master -Dorg -Ssuccess-only 2024-09-12 00:44:35,382 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:44:35,382 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:44:35,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-09-12 00:44:36,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-09-12 00:44:36,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-09-12 00:44:37,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-12 00:44:37,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:44:38,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-12 00:44:38,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:44:38,420 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-09-12 00:44:38,420 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:44:38,420 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-12 00:44:38,420 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:44:38,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:38,429 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:44:38,436 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:44:38,436 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:44:38,443 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:44:38,450 [ scc.git] DEBUG Already up to date. 2024-09-12 00:44:38,450 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-09-12 00:44:38,829 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-09-12 00:44:38,829 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-09-12 00:44:38,834 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:44:38,834 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:44:38,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:38,841 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-12 00:44:38,848 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:38,855 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-12 00:44:38,936 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-09-12 00:44:38,937 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:44:38,941 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-09-12 00:44:38,941 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-09-12 00:44:39,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:44:39,097 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:44:39,141 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:44:39,142 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:39,148 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:44:39,190 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:44:39,197 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b5510ee0> has no local changes 2024-09-12 00:44:39,197 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:44:39,207 [ scc.git] DEBUG [detached HEAD 245c384] merge master -Dorg -Ssuccess-only 2024-09-12 00:44:39,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:44:39,208 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:44:39,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-09-12 00:44:40,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-09-12 00:44:40,014 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-12 00:44:40,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-12 00:44:41,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:44:41,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:44:42,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-12 00:44:42,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:44:42,415 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-12 00:44:42,415 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:44:42,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-12 00:44:42,416 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:44:42,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:42,422 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:44:42,428 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:44:42,428 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:44:42,434 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:44:42,440 [ scc.git] DEBUG Already up to date. 2024-09-12 00:44:42,441 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-09-12 00:44:42,751 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-09-12 00:44:42,752 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-09-12 00:44:42,757 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:44:42,757 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:44:42,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:42,765 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-12 00:44:42,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:42,778 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-12 00:44:42,792 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:44:42,796 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-09-12 00:44:42,796 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-09-12 00:44:42,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:44:42,942 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:44:42,986 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:44:42,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:44:42,992 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:44:43,030 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:44:43,037 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b44d4bb0> has no local changes 2024-09-12 00:44:43,038 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:44:43,046 [ scc.git] DEBUG [detached HEAD 10f6c30] merge master -Dorg -Ssuccess-only 2024-09-12 00:44:43,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:44:43,046 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:44:43,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-09-12 00:44:44,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-09-12 00:44:44,011 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-12 00:44:44,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-12 00:44:45,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:44:45,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:44:46,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-12 00:44:46,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:44:46,471 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-12 00:44:46,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-09-12 00:44:47,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-09-12 00:44:47,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-12 00:44:48,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:44:48,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:44:49,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-12 00:44:49,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:44:49,868 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-12 00:44:50,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-09-12 00:44:50,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-09-12 00:44:50,787 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-12 00:44:51,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-12 00:44:51,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:44:52,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:44:52,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-12 00:44:53,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:44:53,265 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-12 00:44:53,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-09-12 00:44:53,713 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-12 00:44:54,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-12 00:44:54,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:44:55,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:44:55,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-12 00:44:56,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:44:56,208 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-12 00:44:56,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-09-12 00:44:57,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-09-12 00:44:57,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-12 00:44:58,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:44:58,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:44:59,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-12 00:44:59,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:44:59,597 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-12 00:45:00,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-09-12 00:45:00,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-09-12 00:45:01,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-12 00:45:01,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:45:02,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:45:02,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-12 00:45:02,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:45:02,982 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-09-12 00:45:03,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-09-12 00:45:03,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-09-12 00:45:04,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-12 00:45:04,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:45:05,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-12 00:45:05,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:45:05,867 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-09-12 00:45:05,867 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:45:05,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-12 00:45:05,868 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:05,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:05,874 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:45:05,878 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:45:05,879 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:45:05,884 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:45:05,890 [ scc.git] DEBUG Already up to date. 2024-09-12 00:45:05,890 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-09-12 00:45:06,250 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-12 00:45:06,250 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-09-12 00:45:06,255 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-09-12 00:45:08,190 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-12 00:45:08,190 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-09-12 00:45:08,195 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-09-12 00:45:08,642 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-12 00:45:08,642 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-09-12 00:45:08,647 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-09-12 00:45:08,928 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-12 00:45:08,928 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-09-12 00:45:08,933 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-09-12 00:45:09,218 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-12 00:45:09,218 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-09-12 00:45:09,223 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-09-12 00:45:09,682 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-12 00:45:09,682 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-09-12 00:45:09,689 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-09-12 00:45:09,982 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-12 00:45:09,982 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-09-12 00:45:09,988 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:45:09,988 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:09,988 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:09,993 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-12 00:45:09,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:10,004 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-12 00:45:10,016 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-12 00:45:10,016 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:45:10,020 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-09-12 00:45:10,020 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-09-12 00:45:10,020 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-09-12 00:45:10,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:10,190 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-12 00:45:10,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:10,204 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-12 00:45:10,718 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-09-12 00:45:10,719 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-12 00:45:10,719 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-12 00:45:10,719 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-09-12 00:45:10,719 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:45:10,724 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-09-12 00:45:10,724 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-09-12 00:45:10,724 [ scc.git] DEBUG src/app/header.html | 5 + 2024-09-12 00:45:10,724 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-09-12 00:45:10,724 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-09-12 00:45:10,724 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-09-12 00:45:10,724 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-09-12 00:45:10,724 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-09-12 00:45:10,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:10,859 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-12 00:45:10,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:10,877 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-12 00:45:10,955 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-09-12 00:45:10,956 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:45:10,960 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-09-12 00:45:10,960 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-09-12 00:45:10,960 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-09-12 00:45:11,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:11,261 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-12 00:45:11,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:11,275 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-12 00:45:11,464 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:45:11,474 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-09-12 00:45:11,474 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-09-12 00:45:11,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:11,644 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-12 00:45:11,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:11,710 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-12 00:45:11,924 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-12 00:45:11,924 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:45:12,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:12,069 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-12 00:45:12,078 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:12,085 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-12 00:45:12,365 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-12 00:45:12,365 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-12 00:45:12,365 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-12 00:45:12,366 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:45:12,373 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-09-12 00:45:12,373 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-09-12 00:45:12,373 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-09-12 00:45:12,373 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-09-12 00:45:12,373 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-09-12 00:45:12,373 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-09-12 00:45:12,373 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-09-12 00:45:12,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:12,558 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-12 00:45:12,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:12,633 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-12 00:45:12,735 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-12 00:45:12,736 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:45:12,750 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-09-12 00:45:12,750 [ scc.git] DEBUG package.json | 2 +- 2024-09-12 00:45:12,750 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-09-12 00:45:12,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:12,940 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:45:12,987 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:12,987 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:12,994 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:45:13,049 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:45:13,060 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b44f5be0> has no local changes 2024-09-12 00:45:13,060 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:45:13,070 [ scc.git] DEBUG [detached HEAD 4d01685] merge master -Dorg -Ssuccess-only 2024-09-12 00:45:13,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:45:13,070 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:45:13,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-09-12 00:45:13,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-09-12 00:45:14,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-09-12 00:45:14,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-12 00:45:15,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:45:15,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:45:16,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-12 00:45:16,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:45:16,679 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-09-12 00:45:16,680 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:45:16,680 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-12 00:45:16,680 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:16,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:16,686 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:45:16,690 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:45:16,691 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:45:16,696 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:45:16,701 [ scc.git] DEBUG Already up to date. 2024-09-12 00:45:16,701 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-09-12 00:45:17,016 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-09-12 00:45:17,016 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-09-12 00:45:17,021 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:45:17,021 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:17,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:17,026 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-12 00:45:17,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:17,038 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-12 00:45:17,048 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:45:17,050 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-09-12 00:45:17,050 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-09-12 00:45:17,050 [ scc.git] DEBUG requirements.txt | 2 +- 2024-09-12 00:45:17,050 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-09-12 00:45:17,051 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-09-12 00:45:17,051 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-09-12 00:45:17,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:17,185 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:45:17,226 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:17,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:17,233 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:45:17,273 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:45:17,284 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b449e7f0> has no local changes 2024-09-12 00:45:17,285 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:45:17,294 [ scc.git] DEBUG [detached HEAD 9c05ded] merge master -Dorg -Ssuccess-only 2024-09-12 00:45:17,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:45:17,295 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:45:17,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-09-12 00:45:18,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-09-12 00:45:18,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-09-12 00:45:19,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-12 00:45:19,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:45:20,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-12 00:45:20,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:45:20,478 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-09-12 00:45:20,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-09-12 00:45:21,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-09-12 00:45:22,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-12 00:45:22,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:45:22,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-12 00:45:23,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:45:23,371 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-12 00:45:23,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-09-12 00:45:24,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-09-12 00:45:24,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-12 00:45:25,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:45:25,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-12 00:45:26,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:45:26,120 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-12 00:45:26,120 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:45:26,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-12 00:45:26,120 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:26,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:26,127 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:45:26,132 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:45:26,132 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:45:26,137 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:45:26,142 [ scc.git] DEBUG Already up to date. 2024-09-12 00:45:26,142 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-09-12 00:45:26,808 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-12 00:45:26,809 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-09-12 00:45:26,813 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-09-12 00:45:27,325 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-12 00:45:27,326 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-09-12 00:45:27,330 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-09-12 00:45:27,618 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-12 00:45:27,618 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-09-12 00:45:27,624 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:45:27,625 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:27,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:27,630 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-12 00:45:27,636 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:27,641 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-12 00:45:27,668 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-09-12 00:45:27,668 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-09-12 00:45:27,668 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-12 00:45:27,668 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-12 00:45:27,668 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-12 00:45:27,669 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-12 00:45:27,676 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-12 00:45:27,684 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-12 00:45:27,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:27,825 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-12 00:45:27,833 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-12 00:45:27,840 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#182](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-09-12 00:45:27,846 [ scc.config] DEBUG Found github.token 2024-09-12 00:45:27,847 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-09-12 00:45:27,847 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-12 00:45:27,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:27,862 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-12 00:45:27,878 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-12 00:45:27,879 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-12 00:45:27,879 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-09-12 00:45:27,879 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-12 00:45:27,879 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-12 00:45:27,886 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-12 00:45:27,893 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-12 00:45:28,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:28,215 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-12 00:45:28,222 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-12 00:45:28,228 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#182](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-09-12 00:45:28,232 [ scc.config] DEBUG Found github.token 2024-09-12 00:45:28,233 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-09-12 00:45:28,233 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-12 00:45:28,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:28,243 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-12 00:45:28,264 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:45:28,267 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-09-12 00:45:28,267 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-09-12 00:45:28,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:28,594 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:45:28,637 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:28,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:28,642 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:45:28,682 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:45:28,688 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b449e580> has no local changes 2024-09-12 00:45:28,688 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:45:28,697 [ scc.git] DEBUG [detached HEAD 2373d5e] merge master -Dorg -Ssuccess-only 2024-09-12 00:45:28,697 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:45:28,698 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:45:29,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-09-12 00:45:29,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-09-12 00:45:29,621 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-12 00:45:30,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-12 00:45:30,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:45:31,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:45:31,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-12 00:45:32,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:45:32,119 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-12 00:45:32,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-09-12 00:45:32,569 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-12 00:45:33,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-12 00:45:33,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:45:34,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:45:34,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-12 00:45:35,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:45:35,053 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-12 00:45:35,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-09-12 00:45:35,491 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-12 00:45:36,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-12 00:45:36,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:45:37,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-12 00:45:37,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-12 00:45:38,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:45:38,009 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-12 00:45:38,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-09-12 00:45:38,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-09-12 00:45:39,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-09-12 00:45:39,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-09-12 00:45:40,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-09-12 00:45:40,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-09-12 00:45:40,821 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:45:40,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-12 00:45:40,822 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:40,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:40,829 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:45:40,834 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:45:40,835 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:45:40,841 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:45:40,848 [ scc.git] DEBUG Already up to date. 2024-09-12 00:45:40,848 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-09-12 00:45:41,175 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-12 00:45:41,175 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-09-12 00:45:41,181 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-09-12 00:45:41,476 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-12 00:45:41,476 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-09-12 00:45:41,483 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-09-12 00:45:41,776 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-12 00:45:41,777 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-09-12 00:45:41,782 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:45:41,783 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:41,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:41,788 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-12 00:45:41,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:41,799 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-12 00:45:41,809 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:45:41,812 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-09-12 00:45:41,812 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-09-12 00:45:41,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:41,953 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-12 00:45:41,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:41,966 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-12 00:45:42,024 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-12 00:45:42,024 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:45:42,028 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-09-12 00:45:42,028 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-09-12 00:45:42,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:42,379 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-12 00:45:42,386 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:42,391 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-12 00:45:42,403 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-12 00:45:42,404 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:45:42,407 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-09-12 00:45:42,407 [ scc.git] DEBUG package.json | 2 +- 2024-09-12 00:45:42,407 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-09-12 00:45:42,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:42,762 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:45:42,804 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:42,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:42,811 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:45:42,875 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:45:42,886 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b44e1c70> has no local changes 2024-09-12 00:45:42,887 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:45:42,897 [ scc.git] DEBUG [detached HEAD f854964] merge master -Dorg -Ssuccess-only 2024-09-12 00:45:42,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:45:42,898 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:45:43,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-09-12 00:45:43,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-09-12 00:45:44,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-12 00:45:44,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:45:45,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-12 00:45:45,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:45:45,776 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-09-12 00:45:45,776 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:45:45,776 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-12 00:45:45,777 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:45,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:45,785 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:45:45,796 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:45:45,797 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:45:45,802 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:45:45,808 [ scc.git] DEBUG Already up to date. 2024-09-12 00:45:45,808 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-12 00:45:46,139 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-09-12 00:45:46,140 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-12 00:45:46,146 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:45:46,146 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:46,147 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:46,153 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-12 00:45:46,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:46,167 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-12 00:45:46,178 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:45:46,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:46,325 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:45:46,375 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:46,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:46,382 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:45:46,425 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:45:46,432 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b44f3e50> has no local changes 2024-09-12 00:45:46,433 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:45:46,443 [ scc.git] DEBUG [detached HEAD 09622a1] merge master -Dorg -Ssuccess-only 2024-09-12 00:45:46,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:45:46,444 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:45:46,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-09-12 00:45:47,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-09-12 00:45:47,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-09-12 00:45:48,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-09-12 00:45:48,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-12 00:45:49,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:45:49,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-12 00:45:50,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:45:50,066 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-12 00:45:50,067 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:45:50,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-12 00:45:50,067 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:50,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:50,075 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:45:50,084 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:45:50,084 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:45:50,094 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:45:50,121 [ scc.git] DEBUG Already up to date. 2024-09-12 00:45:50,122 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-09-12 00:45:50,534 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-09-12 00:45:50,534 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-09-12 00:45:50,539 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:45:50,540 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:50,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:50,548 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-12 00:45:50,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:50,564 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-12 00:45:50,576 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-09-12 00:45:50,578 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:45:50,582 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-09-12 00:45:50,582 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-09-12 00:45:50,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:50,713 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:45:50,766 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:50,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:50,773 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:45:50,819 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:45:50,826 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b44f1a30> has no local changes 2024-09-12 00:45:50,827 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:45:50,853 [ scc.git] DEBUG [detached HEAD df65635] merge master -Dorg -Ssuccess-only 2024-09-12 00:45:50,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:45:50,854 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:45:51,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-09-12 00:45:51,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-09-12 00:45:52,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-09-12 00:45:52,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-12 00:45:53,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:45:53,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-12 00:45:54,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:45:54,178 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-12 00:45:54,178 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:45:54,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-12 00:45:54,178 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:54,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:54,187 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:45:54,195 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:45:54,196 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:45:54,205 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:45:54,214 [ scc.git] DEBUG Already up to date. 2024-09-12 00:45:54,215 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-12 00:45:54,623 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-09-12 00:45:54,624 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-12 00:45:54,629 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:45:54,629 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:54,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:54,636 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-12 00:45:54,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:54,649 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-12 00:45:54,715 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-09-12 00:45:54,716 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-09-12 00:45:54,716 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-09-12 00:45:54,716 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-09-12 00:45:54,716 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-09-12 00:45:54,716 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-09-12 00:45:54,716 [ scc.git] DEBUG Auto-merging setup.py 2024-09-12 00:45:54,716 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-09-12 00:45:54,716 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-12 00:45:54,717 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-12 00:45:54,724 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-12 00:45:54,731 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-12 00:45:54,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:54,869 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-12 00:45:54,907 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-12 00:45:54,928 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#182](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/urls.py - omero_signup/views.py - setup.py --conflicts 2024-09-12 00:45:54,935 [ scc.config] DEBUG Found github.token 2024-09-12 00:45:54,935 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-09-12 00:45:54,935 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:45:54,981 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:54,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:54,987 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:45:55,031 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:45:55,041 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b4492c40> has no local changes 2024-09-12 00:45:55,041 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:45:55,052 [ scc.git] DEBUG [detached HEAD 065c52a] merge master -Dorg -Ssuccess-only 2024-09-12 00:45:55,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:45:55,052 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:45:55,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-09-12 00:45:55,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-09-12 00:45:56,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-09-12 00:45:56,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-12 00:45:57,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:45:57,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-12 00:45:58,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:45:58,055 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-12 00:45:58,055 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:45:58,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-12 00:45:58,055 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:58,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:58,063 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:45:58,069 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:45:58,070 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:45:58,076 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:45:58,084 [ scc.git] DEBUG Already up to date. 2024-09-12 00:45:58,084 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-09-12 00:45:58,534 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-09-12 00:45:58,535 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-09-12 00:45:58,542 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:45:58,542 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:58,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:58,553 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-09-12 00:45:58,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:58,572 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-09-12 00:45:58,591 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-12 00:45:58,594 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-09-12 00:45:58,595 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-09-12 00:45:58,595 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-09-12 00:45:58,595 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-09-12 00:45:58,595 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-09-12 00:45:58,595 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-09-12 00:45:58,595 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-09-12 00:45:58,595 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-09-12 00:45:58,598 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-09-12 00:45:58,599 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-09-12 00:45:58,599 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-09-12 00:45:58,599 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-09-12 00:45:58,599 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-09-12 00:45:58,599 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-09-12 00:45:58,599 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-09-12 00:45:58,599 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-09-12 00:45:58,599 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-09-12 00:45:58,599 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-09-12 00:45:58,599 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-09-12 00:45:58,599 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-09-12 00:45:58,599 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-09-12 00:45:58,599 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-09-12 00:45:58,599 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-09-12 00:45:58,599 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-09-12 00:45:58,599 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-09-12 00:45:58,599 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-09-12 00:45:58,599 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-09-12 00:45:58,599 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-09-12 00:45:58,599 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-09-12 00:45:58,599 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-09-12 00:45:58,600 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-09-12 00:45:58,600 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-09-12 00:45:58,600 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-09-12 00:45:58,600 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-09-12 00:45:58,600 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-09-12 00:45:58,600 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-09-12 00:45:58,600 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-09-12 00:45:58,600 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-09-12 00:45:58,600 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-09-12 00:45:58,600 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-09-12 00:45:58,600 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-09-12 00:45:58,600 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-09-12 00:45:58,600 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-09-12 00:45:58,600 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-09-12 00:45:58,600 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-09-12 00:45:58,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:45:58,737 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:45:58,780 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:58,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:58,787 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:45:58,831 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:45:58,840 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b440c9d0> has no local changes 2024-09-12 00:45:58,840 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:45:58,882 [ scc.git] DEBUG [detached HEAD 752ec18] merge master -Dorg -Ssuccess-only 2024-09-12 00:45:58,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:45:58,883 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:45:59,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-09-12 00:45:59,152 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:45:59,153 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-12 00:45:59,153 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:59,153 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:59,161 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:45:59,167 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:45:59,167 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:45:59,172 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:45:59,178 [ scc.git] DEBUG Already up to date. 2024-09-12 00:45:59,178 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:45:59,178 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:59,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:59,183 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:45:59,224 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:59,224 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:59,229 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:45:59,274 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:45:59,280 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b444df40> has no local changes 2024-09-12 00:45:59,280 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:45:59,289 [ scc.git] DEBUG [detached HEAD b1cdd86] merge master -Dorg -Ssuccess-only 2024-09-12 00:45:59,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:45:59,290 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:45:59,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-09-12 00:45:59,567 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:45:59,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-12 00:45:59,567 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:59,568 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:59,575 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:45:59,581 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:45:59,582 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:45:59,588 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:45:59,596 [ scc.git] DEBUG Already up to date. 2024-09-12 00:45:59,596 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:45:59,596 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:59,596 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:59,603 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:45:59,646 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:45:59,647 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:45:59,653 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:45:59,698 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:45:59,705 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b4465460> has no local changes 2024-09-12 00:45:59,705 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:45:59,714 [ scc.git] DEBUG [detached HEAD 738f5c1] merge master -Dorg -Ssuccess-only 2024-09-12 00:45:59,715 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:45:59,715 [ scc.git] INFO Overriding base-branch from master to main 2024-09-12 00:45:59,715 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:46:00,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-09-12 00:46:00,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-09-12 00:46:00,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-09-12 00:46:01,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-09-12 00:46:02,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-12 00:46:02,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:46:02,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-12 00:46:03,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:46:03,328 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-12 00:46:03,329 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:46:03,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-12 00:46:03,329 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:46:03,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:03,336 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-09-12 00:46:03,343 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:46:03,343 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-09-12 00:46:03,350 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-09-12 00:46:03,357 [ scc.git] DEBUG Already up to date. 2024-09-12 00:46:03,357 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-09-12 00:46:03,862 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-09-12 00:46:03,862 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-09-12 00:46:03,869 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:46:03,869 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:46:03,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:03,878 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-12 00:46:03,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:03,897 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-12 00:46:04,009 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-09-12 00:46:04,009 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-09-12 00:46:04,009 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-12 00:46:04,010 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-12 00:46:04,018 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-12 00:46:04,026 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-12 00:46:04,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:04,166 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-12 00:46:04,173 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-12 00:46:04,180 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#182](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-09-12 00:46:04,186 [ scc.config] DEBUG Found github.token 2024-09-12 00:46:04,187 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-09-12 00:46:04,187 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:46:04,237 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:46:04,237 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:04,244 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:46:04,289 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:46:04,296 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b443ebb0> has no local changes 2024-09-12 00:46:04,297 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:46:04,306 [ scc.git] DEBUG [detached HEAD 58c3ca9] merge master -Dorg -Ssuccess-only 2024-09-12 00:46:04,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:04,307 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:46:04,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-09-12 00:46:04,588 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:46:04,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-12 00:46:04,588 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:46:04,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:04,594 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:46:04,600 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:46:04,600 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:46:04,605 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:46:04,611 [ scc.git] DEBUG Already up to date. 2024-09-12 00:46:04,611 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:46:04,612 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:46:04,612 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:04,618 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:46:04,663 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:46:04,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:04,670 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:46:04,715 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:46:04,722 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b443beb0> has no local changes 2024-09-12 00:46:04,722 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:46:04,731 [ scc.git] DEBUG [detached HEAD 4fe9c9a] merge master -Dorg -Ssuccess-only 2024-09-12 00:46:04,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:04,731 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:46:05,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-09-12 00:46:05,012 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:46:05,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-12 00:46:05,012 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:46:05,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:05,018 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:46:05,023 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:46:05,023 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:46:05,028 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:46:05,033 [ scc.git] DEBUG Already up to date. 2024-09-12 00:46:05,034 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:46:05,034 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:46:05,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:05,038 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:46:05,078 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:46:05,078 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:05,083 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:46:05,125 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:46:05,136 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b43e4640> has no local changes 2024-09-12 00:46:05,137 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:46:05,159 [ scc.git] DEBUG [detached HEAD 9aefa54] merge master -Dorg -Ssuccess-only 2024-09-12 00:46:05,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:05,160 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:46:05,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-09-12 00:46:06,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-09-12 00:46:06,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-09-12 00:46:07,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-12 00:46:07,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:46:08,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-12 00:46:08,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:46:08,413 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-09-12 00:46:08,413 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:46:08,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-12 00:46:08,414 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:46:08,414 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:08,421 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-12 00:46:08,429 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:46:08,429 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-12 00:46:08,438 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-12 00:46:08,447 [ scc.git] DEBUG Already up to date. 2024-09-12 00:46:08,447 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-09-12 00:46:08,772 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-09-12 00:46:08,772 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-09-12 00:46:08,777 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:46:08,778 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:46:08,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:08,784 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-12 00:46:08,791 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:08,798 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-12 00:46:08,879 [ scc.git] DEBUG Auto-merging Dockerfile 2024-09-12 00:46:08,879 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-09-12 00:46:08,879 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-12 00:46:08,880 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-12 00:46:08,888 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-12 00:46:08,898 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-12 00:46:09,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:09,087 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-12 00:46:09,094 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-12 00:46:09,101 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#182](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-09-12 00:46:09,107 [ scc.config] DEBUG Found github.token 2024-09-12 00:46:09,108 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-09-12 00:46:09,108 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:46:09,157 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:46:09,158 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:09,164 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:46:09,207 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:46:09,215 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b4440c40> has no local changes 2024-09-12 00:46:09,216 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:46:09,226 [ scc.git] DEBUG [detached HEAD 843690d] merge master -Dorg -Ssuccess-only 2024-09-12 00:46:09,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:09,227 [ scc.git] INFO Overriding base-branch from master to develop 2024-09-12 00:46:09,227 [ scc.repo] DEBUG ## PRs found: 2024-09-12 00:46:09,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-09-12 00:46:10,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-09-12 00:46:10,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-09-12 00:46:11,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-09-12 00:46:11,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-09-12 00:46:12,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-09-12 00:46:12,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-09-12 00:46:13,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-12 00:46:13,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-12 00:46:14,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-12 00:46:14,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-09-12 00:46:14,464 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-12 00:46:14,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-09-12 00:46:15,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-09-12 00:46:15,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-09-12 00:46:16,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-09-12 00:46:16,370 [ scc.repo] DEBUG ## Branches found: 2024-09-12 00:46:16,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-12 00:46:16,370 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:46:16,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:16,376 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-09-12 00:46:16,383 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-12 00:46:16,383 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-09-12 00:46:16,389 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-09-12 00:46:16,396 [ scc.git] DEBUG Already up to date. 2024-09-12 00:46:16,396 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-09-12 00:46:16,774 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-09-12 00:46:16,774 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-09-12 00:46:16,781 [ scc.git] DEBUG ## Unique users: [] 2024-09-12 00:46:16,781 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:46:16,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:16,787 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-12 00:46:16,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:16,799 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-12 00:46:16,832 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-09-12 00:46:16,832 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-09-12 00:46:16,833 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-12 00:46:16,834 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-12 00:46:16,839 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-12 00:46:16,845 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-12 00:46:16,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:16,988 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-12 00:46:16,997 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-12 00:46:17,005 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#182](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-09-12 00:46:17,010 [ scc.config] DEBUG Found github.token 2024-09-12 00:46:17,011 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-09-12 00:46:17,011 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-12 00:46:17,051 [ scc.git] DEBUG Get sha1 of %s 2024-09-12 00:46:17,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-12 00:46:17,057 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:46:17,097 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:46:17,104 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b439b910> has no local changes 2024-09-12 00:46:17,104 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:46:17,112 [ scc.git] DEBUG [detached HEAD 09d5ddf] merge master -Dorg -Ssuccess-only 2024-09-12 00:46:17,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:17,113 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-12 00:46:17,196 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-09-12 00:46:17,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:17,383 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-09-12 00:46:17,388 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-09-12 00:46:17,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:17,765 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-09-12 00:46:17,770 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-09-12 00:46:18,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:18,156 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-09-12 00:46:18,163 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-09-12 00:46:18,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:18,548 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-09-12 00:46:18,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:18,939 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-09-12 00:46:18,945 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-09-12 00:46:19,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:19,324 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-09-12 00:46:19,329 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-09-12 00:46:19,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:19,737 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-09-12 00:46:19,743 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-09-12 00:46:20,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:20,129 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-09-12 00:46:20,134 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-09-12 00:46:20,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:20,529 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-09-12 00:46:20,534 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-09-12 00:46:20,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:20,919 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-09-12 00:46:20,924 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-09-12 00:46:21,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:21,339 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-09-12 00:46:21,346 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-09-12 00:46:21,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:21,710 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-09-12 00:46:21,716 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-09-12 00:46:22,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:22,113 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-09-12 00:46:22,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:22,520 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-09-12 00:46:22,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:22,902 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-09-12 00:46:22,909 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-09-12 00:46:23,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:23,304 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-09-12 00:46:23,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:23,678 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-09-12 00:46:24,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:24,093 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-09-12 00:46:24,099 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-09-12 00:46:24,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:24,477 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-09-12 00:46:24,482 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-09-12 00:46:24,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:24,858 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-09-12 00:46:24,864 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-09-12 00:46:25,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:25,259 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-09-12 00:46:25,266 [ scc.config] DEBUG Found submodule.scripts.url 2024-09-12 00:46:25,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-12 00:46:25,640 [ scc.config] DEBUG Found submodule.scripts.branch 2024-09-12 00:46:25,640 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-12 00:46:25,726 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f93b7332e50> has local changes 2024-09-12 00:46:25,726 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#182 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/182/)' 2024-09-12 00:46:25,742 [ scc.git] DEBUG [detached HEAD aeb7d77] merge master -Dorg -Ssuccess-only 2024-09-12 00:46:25,743 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-12 00:46:25,743 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-09-12 00:46:25,743 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,743 [ scc.merge] INFO 2024-09-12 00:46:25,743 [ scc.merge] INFO Merged PRs: 2024-09-12 00:46:25,743 [ scc.merge] INFO - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-12 00:46:25,743 [ scc.merge] INFO 2024-09-12 00:46:25,743 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-09-12 00:46:25,744 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,744 [ scc.merge] INFO 2024-09-12 00:46:25,744 [ scc.merge] INFO Merged PRs: 2024-09-12 00:46:25,744 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-09-12 00:46:25,744 [ scc.merge] INFO 2024-09-12 00:46:25,744 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-09-12 00:46:25,744 [ scc.merge] INFO Excluded PRs: 2024-09-12 00:46:25,744 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-09-12 00:46:25,744 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,744 [ scc.merge] INFO 2024-09-12 00:46:25,744 [ scc.merge] INFO Merged PRs: 2024-09-12 00:46:25,744 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-09-12 00:46:25,744 [ scc.merge] INFO 2024-09-12 00:46:25,744 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-09-12 00:46:25,744 [ scc.merge] INFO Excluded PRs: 2024-09-12 00:46:25,744 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-09-12 00:46:25,744 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-09-12 00:46:25,744 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-09-12 00:46:25,744 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-09-12 00:46:25,744 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,744 [ scc.merge] INFO 2024-09-12 00:46:25,744 [ scc.merge] INFO Merged PRs: 2024-09-12 00:46:25,744 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-09-12 00:46:25,744 [ scc.merge] INFO 2024-09-12 00:46:25,744 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-09-12 00:46:25,744 [ scc.merge] INFO Excluded PRs: 2024-09-12 00:46:25,744 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-12 00:46:25,744 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,744 [ scc.merge] INFO 2024-09-12 00:46:25,744 [ scc.merge] INFO Merged PRs: 2024-09-12 00:46:25,744 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-09-12 00:46:25,744 [ scc.merge] INFO 2024-09-12 00:46:25,744 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-12 00:46:25,744 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-09-12 00:46:25,744 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-12 00:46:25,744 [ scc.merge] INFO 2024-09-12 00:46:25,745 [ scc.merge] INFO Repository: ome/omero-figure 2024-09-12 00:46:25,745 [ scc.merge] INFO Excluded PRs: 2024-09-12 00:46:25,745 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-09-12 00:46:25,745 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-09-12 00:46:25,745 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,745 [ scc.merge] INFO 2024-09-12 00:46:25,745 [ scc.merge] INFO Merged PRs: 2024-09-12 00:46:25,745 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-09-12 00:46:25,745 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-12 00:46:25,745 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-09-12 00:46:25,745 [ scc.merge] INFO - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-12 00:46:25,745 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-09-12 00:46:25,745 [ scc.merge] INFO 2024-09-12 00:46:25,745 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-12 00:46:25,745 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-09-12 00:46:25,745 [ scc.merge] INFO 2024-09-12 00:46:25,745 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-09-12 00:46:25,745 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,745 [ scc.merge] INFO 2024-09-12 00:46:25,745 [ scc.merge] INFO Merged PRs: 2024-09-12 00:46:25,745 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-09-12 00:46:25,745 [ scc.merge] INFO 2024-09-12 00:46:25,745 [ scc.merge] INFO Repository: ome/omero-gallery 2024-09-12 00:46:25,745 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,745 [ scc.merge] INFO 2024-09-12 00:46:25,745 [ scc.merge] INFO Merged PRs: 2024-09-12 00:46:25,745 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-12 00:46:25,745 [ scc.merge] INFO 2024-09-12 00:46:25,745 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-09-12 00:46:25,745 [ scc.merge] INFO Excluded PRs: 2024-09-12 00:46:25,745 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-09-12 00:46:25,745 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-09-12 00:46:25,745 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-09-12 00:46:25,745 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,745 [ scc.merge] INFO 2024-09-12 00:46:25,745 [ scc.merge] INFO Merged PRs: 2024-09-12 00:46:25,745 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-09-12 00:46:25,745 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-09-12 00:46:25,746 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-12 00:46:25,746 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-12 00:46:25,746 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-12 00:46:25,746 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-12 00:46:25,746 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-12 00:46:25,746 [ scc.merge] INFO 2024-09-12 00:46:25,746 [ scc.merge] INFO Repository: ome/omero-mapr 2024-09-12 00:46:25,746 [ scc.merge] INFO Excluded PRs: 2024-09-12 00:46:25,746 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-09-12 00:46:25,746 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,746 [ scc.merge] INFO 2024-09-12 00:46:25,746 [ scc.merge] INFO Merged PRs: 2024-09-12 00:46:25,746 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-09-12 00:46:25,746 [ scc.merge] INFO 2024-09-12 00:46:25,746 [ scc.merge] INFO Repository: ome/omero-metadata 2024-09-12 00:46:25,746 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,746 [ scc.merge] INFO 2024-09-12 00:46:25,746 [ scc.merge] INFO Merged PRs: 2024-09-12 00:46:25,746 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-09-12 00:46:25,746 [ scc.merge] INFO 2024-09-12 00:46:25,746 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-12 00:46:25,746 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-12 00:46:25,746 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-12 00:46:25,746 [ scc.merge] INFO 2024-09-12 00:46:25,746 [ scc.merge] INFO Repository: ome/omero-parade 2024-09-12 00:46:25,746 [ scc.merge] INFO Excluded PRs: 2024-09-12 00:46:25,746 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-09-12 00:46:25,746 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-09-12 00:46:25,746 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-09-12 00:46:25,746 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,746 [ scc.merge] INFO 2024-09-12 00:46:25,746 [ scc.merge] INFO Merged PRs: 2024-09-12 00:46:25,746 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-12 00:46:25,746 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-12 00:46:25,746 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-12 00:46:25,746 [ scc.merge] INFO 2024-09-12 00:46:25,746 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-09-12 00:46:25,747 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,747 [ scc.merge] INFO 2024-09-12 00:46:25,747 [ scc.merge] INFO Merged PRs: 2024-09-12 00:46:25,747 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-09-12 00:46:25,747 [ scc.merge] INFO 2024-09-12 00:46:25,747 [ scc.merge] INFO Repository: ome/omero-rois 2024-09-12 00:46:25,747 [ scc.merge] INFO Excluded PRs: 2024-09-12 00:46:25,747 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-12 00:46:25,747 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,747 [ scc.merge] INFO 2024-09-12 00:46:25,747 [ scc.merge] INFO Merged PRs: 2024-09-12 00:46:25,747 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-12 00:46:25,747 [ scc.merge] INFO 2024-09-12 00:46:25,747 [ scc.merge] INFO Repository: ome/omero-signup 2024-09-12 00:46:25,747 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,747 [ scc.merge] INFO 2024-09-12 00:46:25,747 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-12 00:46:25,747 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-12 00:46:25,747 [ scc.merge] INFO 2024-09-12 00:46:25,747 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-09-12 00:46:25,747 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,747 [ scc.merge] INFO 2024-09-12 00:46:25,747 [ scc.merge] INFO Merged PRs: 2024-09-12 00:46:25,747 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-12 00:46:25,747 [ scc.merge] INFO 2024-09-12 00:46:25,747 [ scc.merge] INFO Repository: ome/omero-upload 2024-09-12 00:46:25,747 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,747 [ scc.merge] INFO 2024-09-12 00:46:25,747 [ scc.merge] INFO 2024-09-12 00:46:25,747 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-09-12 00:46:25,747 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,747 [ scc.merge] INFO 2024-09-12 00:46:25,747 [ scc.merge] INFO 2024-09-12 00:46:25,747 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-09-12 00:46:25,747 [ scc.merge] INFO Excluded PRs: 2024-09-12 00:46:25,747 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-09-12 00:46:25,747 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,747 [ scc.merge] INFO 2024-09-12 00:46:25,748 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-12 00:46:25,748 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-12 00:46:25,748 [ scc.merge] INFO 2024-09-12 00:46:25,748 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-09-12 00:46:25,748 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,748 [ scc.merge] INFO 2024-09-12 00:46:25,748 [ scc.merge] INFO 2024-09-12 00:46:25,748 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-09-12 00:46:25,748 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,748 [ scc.merge] INFO 2024-09-12 00:46:25,748 [ scc.merge] INFO 2024-09-12 00:46:25,748 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-09-12 00:46:25,748 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,748 [ scc.merge] INFO 2024-09-12 00:46:25,748 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-12 00:46:25,748 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-09-12 00:46:25,748 [ scc.merge] INFO 2024-09-12 00:46:25,748 [ scc.merge] INFO Repository: ome/scripts 2024-09-12 00:46:25,748 [ scc.merge] INFO Excluded PRs: 2024-09-12 00:46:25,748 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-09-12 00:46:25,748 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-09-12 00:46:25,748 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-09-12 00:46:25,748 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-09-12 00:46:25,748 [ scc.merge] INFO Already up to date. 2024-09-12 00:46:25,748 [ scc.merge] INFO 2024-09-12 00:46:25,748 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-12 00:46:25,748 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-12 00:46:25,748 [ scc.merge] INFO 2024-09-12 00:46:25,748 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-12 00:46:25,748 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-12 00:46:25,755 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-12 00:46:25,762 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,768 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,768 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-12 00:46:25,768 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,774 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,775 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-12 00:46:25,775 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-12 00:46:25,781 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-12 00:46:25,787 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,794 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,794 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-12 00:46:25,794 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,800 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,800 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-12 00:46:25,800 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-12 00:46:25,807 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-12 00:46:25,812 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-12 00:46:25,818 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,823 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-12 00:46:25,824 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-12 00:46:25,830 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,836 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,836 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-12 00:46:25,836 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,842 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,842 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-12 00:46:25,842 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,848 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,848 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-12 00:46:25,848 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,856 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-12 00:46:25,856 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-12 00:46:25,862 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-12 00:46:25,868 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-12 00:46:25,875 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-12 00:46:25,880 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-12 00:46:25,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-12 00:46:25,887 [ scc.git] DEBUG Calling 'git remote' 2024-09-12 00:46:25,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD bca1127] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from f9a321dd nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD e062c99] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-12 00:47:13,470 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-12 00:47:22,401 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-12 00:47:24,684 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-12 00:47:29,179 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-12 00:48:08,980 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS