Started by upstream project "Trigger" build number 210 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 182 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.8-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.8-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.3.2 cryptography-43.0.1 future-1.0.0 idna-3.8 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-09-14 00:54:11,475 [ scc.config] DEBUG Found github.token 2024-09-14 00:54:11,478 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-14 00:54:11,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:54:12,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:54:12,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-14 00:54:12,440 [ scc.gh] DEBUG 3300 remaining from 5000 (Reset at 01:09 2024-09-14 00:54:12,441 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:12,445 [ scc.git] DEBUG Check current status 2024-09-14 00:54:12,446 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:12,450 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-14 00:54:12,450 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:12,502 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-14 00:54:12,505 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-14 00:54:12,508 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-14 00:54:12,512 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-14 00:54:12,516 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-14 00:54:12,519 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-14 00:54:12,522 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-14 00:54:12,567 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-14 00:54:12,571 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-14 00:54:12,574 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-14 00:54:12,577 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-14 00:54:12,580 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-14 00:54:12,584 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-14 00:54:12,586 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-14 00:54:12,658 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-14 00:54:12,661 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-14 00:54:12,664 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-14 00:54:12,667 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-14 00:54:12,670 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-14 00:54:12,673 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-14 00:54:12,677 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-14 00:54:12,680 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-14 00:54:12,687 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:12,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-14 00:54:13,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:54:13,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:54:14,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:54:14,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:54:14,667 [ scc.git] DEBUG Resetting... 2024-09-14 00:54:14,667 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-14 00:54:14,678 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-14 00:54:14,678 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-14 00:54:14,806 [ scc.git] DEBUG Check current status 2024-09-14 00:54:14,806 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:14,812 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-14 00:54:14,812 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:14,871 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-14 00:54:14,875 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-14 00:54:14,880 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-14 00:54:14,885 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-14 00:54:14,892 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-14 00:54:14,896 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-14 00:54:14,901 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-14 00:54:14,908 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-14 00:54:14,912 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-14 00:54:14,915 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-14 00:54:14,918 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-14 00:54:14,920 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-14 00:54:14,924 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-14 00:54:14,926 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-14 00:54:14,930 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-14 00:54:14,933 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-14 00:54:14,936 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-14 00:54:14,939 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-14 00:54:14,941 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-14 00:54:14,944 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-14 00:54:14,947 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-14 00:54:14,951 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-14 00:54:14,952 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-14 00:54:14,952 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-14 00:54:14,952 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-14 00:54:14,953 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-14 00:54:14,953 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-14 00:54:14,953 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:54:15,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-14 00:54:15,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/390 HTTP/1.1" 200 None 2024-09-14 00:54:15,629 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-14 00:54:15,629 [ scc.repo] DEBUG - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-14 00:54:15,629 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:54:15,629 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:54:15,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:54:15,634 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:54:15,639 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:54:15,640 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:54:15,646 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:54:15,651 [ scc.git] DEBUG Already up to date. 2024-09-14 00:54:15,652 [ scc.git] DEBUG Calling 'git fetch origin pull/390/head' 2024-09-14 00:54:15,961 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-14 00:54:15,962 [ scc.git] DEBUG * branch refs/pull/390/head -> FETCH_HEAD 2024-09-14 00:54:15,968 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:54:15,968 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:54:15,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:54:15,975 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-14 00:54:15,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:54:15,984 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 390 (Bump omero-figure from `5f62399` to `f9a321d`) 89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-14 00:54:16,002 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:54:16,005 [ scc.git] DEBUG omero-figure | 2 +- 2024-09-14 00:54:16,008 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-14 00:54:16,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:54:16,144 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:54:16,233 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53' 2024-09-14 00:54:16,234 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:54:16,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:54:16,239 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:54:16,946 [ scc.git] DEBUG has no local changes 2024-09-14 00:54:16,946 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:54:17,032 [ scc.git] DEBUG [detached HEAD 441cd69] merge master -Dorg -Snone 2024-09-14 00:54:17,032 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-14 00:54:17,032 [ scc.merge] INFO Already up to date. 2024-09-14 00:54:17,032 [ scc.merge] INFO 2024-09-14 00:54:17,032 [ scc.merge] INFO Merged PRs: 2024-09-14 00:54:17,032 [ scc.merge] INFO - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-14 00:54:17,032 [ scc.merge] INFO 2024-09-14 00:54:17,032 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-14 00:54:17,032 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-09-14 00:54:25,132 [ scc.config] DEBUG Found github.token 2024-09-14 00:54:25,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-14 00:54:25,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:54:25,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:54:26,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-14 00:54:26,085 [ scc.gh] DEBUG 3243 remaining from 5000 (Reset at 01:09 2024-09-14 00:54:26,086 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:26,091 [ scc.git] DEBUG Check current status 2024-09-14 00:54:26,091 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:26,095 [ scc.git] DEBUG 441cd69 merge master -Dorg -Snone 2024-09-14 00:54:26,096 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:26,159 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-14 00:54:26,162 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-14 00:54:26,165 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-14 00:54:26,168 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-14 00:54:26,825 [ scc.git] DEBUG f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 omero-figure (v7.1.0-23-gf9a321dd) 2024-09-14 00:54:26,828 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-14 00:54:26,832 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-14 00:54:26,836 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-14 00:54:26,841 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-14 00:54:26,845 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-14 00:54:26,848 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-14 00:54:26,851 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-14 00:54:26,856 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-14 00:54:26,859 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-14 00:54:26,863 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-14 00:54:26,868 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-14 00:54:26,871 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-14 00:54:26,874 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-14 00:54:26,877 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-14 00:54:26,880 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-14 00:54:26,884 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-14 00:54:26,889 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-14 00:54:26,895 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:26,895 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-09-14 00:54:26,898 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-09-14 00:54:27,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-14 00:54:27,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:54:28,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:54:28,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:54:28,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:54:28,852 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:54:28,933 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-14 00:54:28,933 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:28,939 [ scc.git] DEBUG Check current status 2024-09-14 00:54:28,939 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:28,945 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-09-14 00:54:28,945 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:28,994 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:29,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-09-14 00:54:29,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:54:30,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:54:30,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:54:30,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:54:30,974 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:54:31,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:54:31,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-14 00:54:31,018 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:31,024 [ scc.git] DEBUG Check current status 2024-09-14 00:54:31,024 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:31,030 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-09-14 00:54:31,030 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:31,084 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:31,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-09-14 00:54:31,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:54:32,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:54:32,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:54:33,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:54:33,101 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:54:33,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:54:33,148 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-14 00:54:33,148 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:33,154 [ scc.git] DEBUG Check current status 2024-09-14 00:54:33,154 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:33,158 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-09-14 00:54:33,158 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:33,203 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:33,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-09-14 00:54:34,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:54:34,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:54:34,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:54:35,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:54:35,271 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:54:35,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:54:35,316 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-14 00:54:35,316 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:35,321 [ scc.git] DEBUG Check current status 2024-09-14 00:54:35,321 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:35,326 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-14 00:54:35,326 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:35,374 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:35,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-09-14 00:54:36,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:54:36,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:54:36,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:54:37,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:54:37,395 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:54:37,436 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:54:37,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-14 00:54:37,437 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:37,442 [ scc.git] DEBUG Check current status 2024-09-14 00:54:37,442 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:37,461 [ scc.git] DEBUG f9a321dd Merge pull request #549 from will-moore/inset_feature 2024-09-14 00:54:37,462 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:37,507 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:37,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-09-14 00:54:38,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:54:38,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:54:39,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:54:39,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:54:39,499 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:54:39,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:54:39,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-14 00:54:39,548 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:39,552 [ scc.git] DEBUG Check current status 2024-09-14 00:54:39,553 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:39,557 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-14 00:54:39,557 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:39,606 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:39,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-09-14 00:54:40,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:54:40,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:54:41,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:54:41,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:54:41,637 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:54:41,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:54:41,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-14 00:54:41,678 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:41,683 [ scc.git] DEBUG Check current status 2024-09-14 00:54:41,683 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:41,687 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-09-14 00:54:41,687 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:41,729 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:42,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-09-14 00:54:42,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:54:42,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:54:43,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:54:43,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:54:43,764 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:54:43,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:54:43,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-14 00:54:43,809 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:43,815 [ scc.git] DEBUG Check current status 2024-09-14 00:54:43,816 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:43,820 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-09-14 00:54:43,820 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:43,869 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:44,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-09-14 00:54:44,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:54:45,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:54:45,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:54:45,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:54:45,960 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:54:46,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:54:46,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-14 00:54:46,011 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:46,017 [ scc.git] DEBUG Check current status 2024-09-14 00:54:46,017 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:46,023 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-09-14 00:54:46,024 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:46,078 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:46,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-09-14 00:54:46,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:54:47,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:54:47,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:54:48,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:54:48,090 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:54:48,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:54:48,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-14 00:54:48,139 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:48,146 [ scc.git] DEBUG Check current status 2024-09-14 00:54:48,146 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:48,152 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-14 00:54:48,152 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:48,205 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:48,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-09-14 00:54:48,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:54:49,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:54:49,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:54:50,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:54:50,210 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:54:50,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:54:50,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-14 00:54:50,257 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:50,262 [ scc.git] DEBUG Check current status 2024-09-14 00:54:50,262 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:50,266 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-09-14 00:54:50,267 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:50,316 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:50,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-09-14 00:54:51,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:54:51,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:54:51,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:54:52,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:54:52,361 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:54:52,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:54:52,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-14 00:54:52,411 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:52,417 [ scc.git] DEBUG Check current status 2024-09-14 00:54:52,417 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:52,422 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-09-14 00:54:52,423 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:52,477 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:52,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-09-14 00:54:53,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:54:53,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:54:54,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:54:54,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:54:54,442 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:54:54,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:54:54,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-14 00:54:54,507 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:54,525 [ scc.git] DEBUG Check current status 2024-09-14 00:54:54,525 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:54,534 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-09-14 00:54:54,534 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:54,604 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:54,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-09-14 00:54:55,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:54:55,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:54:56,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:54:56,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:54:56,638 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:54:56,690 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:54:56,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-14 00:54:56,691 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:56,698 [ scc.git] DEBUG Check current status 2024-09-14 00:54:56,699 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:56,706 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-14 00:54:56,707 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:56,763 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:57,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-09-14 00:54:57,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:54:57,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:54:58,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:54:58,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:54:58,770 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:54:58,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:54:58,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-14 00:54:58,812 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:54:58,817 [ scc.git] DEBUG Check current status 2024-09-14 00:54:58,817 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:54:58,823 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-09-14 00:54:58,823 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:54:58,870 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:54:59,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-14 00:54:59,171 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-14 00:54:59,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-09-14 00:54:59,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:55:00,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:55:00,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:55:01,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:55:01,076 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:55:01,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:55:01,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-14 00:55:01,121 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:55:01,126 [ scc.git] DEBUG Check current status 2024-09-14 00:55:01,126 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:55:01,131 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-09-14 00:55:01,131 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:55:01,178 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:55:01,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-09-14 00:55:02,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:55:02,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:55:02,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:55:03,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:55:03,233 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:55:03,278 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:55:03,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-14 00:55:03,279 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:55:03,284 [ scc.git] DEBUG Check current status 2024-09-14 00:55:03,284 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:55:03,289 [ scc.git] DEBUG deab817 update setup-python to v4 2024-09-14 00:55:03,289 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:55:03,338 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:55:03,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-09-14 00:55:04,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:55:04,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:55:05,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:55:05,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:55:05,521 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:55:05,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:55:05,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-14 00:55:05,565 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:55:05,570 [ scc.git] DEBUG Check current status 2024-09-14 00:55:05,570 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:55:05,575 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-14 00:55:05,576 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:55:05,624 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:55:05,625 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-09-14 00:55:06,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-09-14 00:55:06,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:55:06,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:55:07,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:55:07,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:55:07,685 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:55:07,732 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:55:07,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-14 00:55:07,733 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:55:07,738 [ scc.git] DEBUG Check current status 2024-09-14 00:55:07,739 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:55:07,745 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-14 00:55:07,745 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:55:07,795 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:55:08,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-14 00:55:08,086 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-14 00:55:08,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-09-14 00:55:08,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:55:09,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:55:09,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:55:09,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:55:09,991 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:55:10,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:55:10,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-14 00:55:10,040 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:55:10,045 [ scc.git] DEBUG Check current status 2024-09-14 00:55:10,045 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:55:10,050 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-09-14 00:55:10,050 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:55:10,095 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:55:10,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-14 00:55:10,403 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-14 00:55:10,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-09-14 00:55:11,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:55:11,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:55:11,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:55:12,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:55:12,258 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:55:12,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:55:12,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-14 00:55:12,304 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:55:12,309 [ scc.git] DEBUG Check current status 2024-09-14 00:55:12,309 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:55:12,314 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-14 00:55:12,315 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:55:12,368 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:55:12,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-09-14 00:55:13,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:55:13,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:55:13,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:55:14,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:55:14,383 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:55:14,429 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:55:14,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-14 00:55:14,430 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-14 00:55:14,436 [ scc.git] DEBUG Check current status 2024-09-14 00:55:14,436 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:55:14,481 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-14 00:55:14,482 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:55:14,529 [ scc.config] DEBUG Found remote.origin.url 2024-09-14 00:55:14,530 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-09-14 00:55:14,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-14 00:55:14,793 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-14 00:55:15,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-09-14 00:55:15,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-14 00:55:15,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-14 00:55:16,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-14 00:55:16,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-14 00:55:16,699 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:55:16,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:55:16,747 [ scc.git] DEBUG Resetting... 2024-09-14 00:55:16,747 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-14 00:55:16,759 [ scc.git] DEBUG HEAD is now at 441cd69 merge master -Dorg -Snone 2024-09-14 00:55:16,760 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-14 00:55:16,935 [ scc.git] DEBUG Check current status 2024-09-14 00:55:16,935 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-14 00:55:16,943 [ scc.git] DEBUG 441cd69 merge master -Dorg -Snone 2024-09-14 00:55:16,943 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-14 00:55:17,051 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-14 00:55:17,054 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-14 00:55:17,065 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-14 00:55:17,068 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-14 00:55:17,080 [ scc.git] DEBUG f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 omero-figure (v7.1.0-23-gf9a321dd) 2024-09-14 00:55:17,085 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-14 00:55:17,090 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-14 00:55:17,096 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-14 00:55:17,100 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-14 00:55:17,104 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-14 00:55:17,107 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-14 00:55:17,110 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-14 00:55:17,113 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-14 00:55:17,116 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-14 00:55:17,120 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-14 00:55:17,124 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-14 00:55:17,127 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-14 00:55:17,131 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-14 00:55:17,133 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-14 00:55:17,136 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-14 00:55:17,155 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-14 00:55:17,159 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-14 00:55:17,160 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-14 00:55:17,161 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-14 00:55:17,161 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-14 00:55:17,161 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-14 00:55:17,161 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-14 00:55:17,161 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-09-14 00:55:17,161 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:55:17,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-14 00:55:17,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/390 HTTP/1.1" 200 None 2024-09-14 00:55:17,823 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-14 00:55:18,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518 HTTP/1.1" 200 None 2024-09-14 00:55:18,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:55:19,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518 HTTP/1.1" 200 None 2024-09-14 00:55:19,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:55:19,633 [ scc.repo] DEBUG - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-14 00:55:19,633 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:55:19,633 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:55:19,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:19,641 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:55:19,645 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:55:19,645 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:55:19,651 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:55:19,658 [ scc.git] DEBUG Already up to date. 2024-09-14 00:55:19,658 [ scc.git] DEBUG Calling 'git fetch origin pull/390/head' 2024-09-14 00:55:20,135 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-14 00:55:20,135 [ scc.git] DEBUG * branch refs/pull/390/head -> FETCH_HEAD 2024-09-14 00:55:20,141 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:55:20,141 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:55:20,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:20,147 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-14 00:55:20,153 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:20,159 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 390 (Bump omero-figure from `5f62399` to `f9a321d`) 89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-14 00:55:20,164 [ scc.git] DEBUG Already up to date. 2024-09-14 00:55:20,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:55:20,309 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:55:20,371 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:55:20,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:20,378 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:55:20,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-09-14 00:55:21,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-09-14 00:55:21,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-14 00:55:22,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:55:22,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:55:23,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-14 00:55:23,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:55:23,463 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-09-14 00:55:23,463 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:55:23,463 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-14 00:55:23,463 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:55:23,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:23,468 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:55:23,473 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:55:23,473 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:55:23,478 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:55:23,484 [ scc.git] DEBUG Already up to date. 2024-09-14 00:55:23,484 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-09-14 00:55:24,123 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-09-14 00:55:24,123 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-09-14 00:55:24,128 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:55:24,128 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:55:24,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:24,134 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-14 00:55:24,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:24,147 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-14 00:55:24,207 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:55:24,301 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-09-14 00:55:24,301 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-09-14 00:55:24,301 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-09-14 00:55:24,301 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-09-14 00:55:24,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:55:24,433 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:55:24,480 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:55:24,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:24,488 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:55:24,534 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:55:24,542 [ scc.git] DEBUG has no local changes 2024-09-14 00:55:24,543 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:55:24,553 [ scc.git] DEBUG [detached HEAD 8baf729] merge master -Dorg -Ssuccess-only 2024-09-14 00:55:24,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:55:24,553 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:55:24,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-09-14 00:55:25,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-09-14 00:55:25,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-09-14 00:55:26,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-14 00:55:26,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:55:27,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:55:27,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-14 00:55:28,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:55:28,172 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-09-14 00:55:28,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-09-14 00:55:29,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-09-14 00:55:29,058 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:55:29,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-14 00:55:29,059 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:55:29,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:29,065 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:55:29,070 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:55:29,070 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:55:29,075 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:55:29,081 [ scc.git] DEBUG Already up to date. 2024-09-14 00:55:29,081 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-09-14 00:55:29,590 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-09-14 00:55:29,590 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-09-14 00:55:29,644 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:55:29,644 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:55:29,644 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:29,650 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-14 00:55:29,656 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:29,661 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-14 00:55:29,719 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:55:29,723 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-09-14 00:55:29,723 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-09-14 00:55:29,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:55:29,854 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:55:29,897 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:55:29,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:29,903 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:55:29,944 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:55:29,951 [ scc.git] DEBUG has no local changes 2024-09-14 00:55:29,951 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:55:29,960 [ scc.git] DEBUG [detached HEAD 17904f4] merge master -Dorg -Ssuccess-only 2024-09-14 00:55:29,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:55:29,960 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:55:30,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-09-14 00:55:30,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-09-14 00:55:31,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-09-14 00:55:31,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-09-14 00:55:32,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-09-14 00:55:32,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-14 00:55:33,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:55:33,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-14 00:55:34,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:55:34,065 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-09-14 00:55:34,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-09-14 00:55:34,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-09-14 00:55:35,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-09-14 00:55:35,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-09-14 00:55:36,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-09-14 00:55:36,277 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:55:36,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-14 00:55:36,277 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:55:36,277 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:36,283 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:55:36,287 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:55:36,288 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:55:36,293 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:55:36,299 [ scc.git] DEBUG Already up to date. 2024-09-14 00:55:36,299 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-09-14 00:55:36,743 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-09-14 00:55:36,743 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-09-14 00:55:36,747 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:55:36,748 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:55:36,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:36,754 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-14 00:55:36,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:36,764 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-14 00:55:36,925 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-09-14 00:55:36,926 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:55:36,929 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-09-14 00:55:36,929 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-09-14 00:55:37,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:55:37,066 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:55:37,108 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:55:37,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:37,114 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:55:37,160 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:55:37,167 [ scc.git] DEBUG has no local changes 2024-09-14 00:55:37,167 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:55:37,176 [ scc.git] DEBUG [detached HEAD c2f6583] merge master -Dorg -Ssuccess-only 2024-09-14 00:55:37,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:55:37,176 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:55:37,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-09-14 00:55:37,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-09-14 00:55:38,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-09-14 00:55:38,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-09-14 00:55:39,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-14 00:55:39,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:55:40,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:55:40,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-14 00:55:41,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-09-14 00:55:41,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-14 00:55:42,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-09-14 00:55:42,081 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-09-14 00:55:42,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-09-14 00:55:43,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-09-14 00:55:43,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-09-14 00:55:43,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-14 00:55:44,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:55:44,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-14 00:55:45,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:55:45,325 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-14 00:55:45,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-09-14 00:55:46,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-09-14 00:55:46,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-14 00:55:47,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:55:47,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-14 00:55:48,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:55:48,170 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-09-14 00:55:48,170 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:55:48,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-14 00:55:48,171 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:55:48,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:48,180 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:55:48,185 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:55:48,185 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:55:48,191 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:55:48,198 [ scc.git] DEBUG Already up to date. 2024-09-14 00:55:48,198 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-09-14 00:55:48,503 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-14 00:55:48,504 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-09-14 00:55:48,509 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-09-14 00:55:48,872 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-14 00:55:48,872 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-09-14 00:55:48,877 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-09-14 00:55:49,226 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-14 00:55:49,226 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-09-14 00:55:49,232 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:55:49,232 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:55:49,232 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:49,238 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-14 00:55:49,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:49,252 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-14 00:55:49,296 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-14 00:55:49,296 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-14 00:55:49,296 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-14 00:55:49,296 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-14 00:55:49,297 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-14 00:55:49,304 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-14 00:55:49,313 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-14 00:55:49,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:55:49,504 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-14 00:55:49,513 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-14 00:55:49,519 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#184](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-09-14 00:55:49,524 [ scc.config] DEBUG Found github.token 2024-09-14 00:55:49,524 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-09-14 00:55:49,524 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-14 00:55:49,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:49,536 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-14 00:55:49,550 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-09-14 00:55:49,550 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-09-14 00:55:49,550 [ scc.git] DEBUG Auto-merging setup.py 2024-09-14 00:55:49,550 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-14 00:55:49,550 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-14 00:55:49,550 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-14 00:55:49,551 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-09-14 00:55:49,551 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-14 00:55:49,551 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-14 00:55:49,556 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-14 00:55:49,563 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-14 00:55:49,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:55:49,892 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-14 00:55:49,900 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-14 00:55:49,907 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#184](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-09-14 00:55:49,913 [ scc.config] DEBUG Found github.token 2024-09-14 00:55:49,913 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-09-14 00:55:49,913 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-14 00:55:49,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:49,929 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-14 00:55:49,946 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-09-14 00:55:49,946 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-14 00:55:49,947 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:55:49,950 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-09-14 00:55:49,950 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-09-14 00:55:49,950 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-09-14 00:55:49,950 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-09-14 00:55:49,951 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-09-14 00:55:49,951 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-09-14 00:55:50,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:55:50,276 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:55:50,323 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:55:50,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:55:50,331 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:55:50,374 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:55:50,382 [ scc.git] DEBUG has no local changes 2024-09-14 00:55:50,382 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:55:50,394 [ scc.git] DEBUG [detached HEAD 321b7da] merge master -Dorg -Ssuccess-only 2024-09-14 00:55:50,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:55:50,395 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:55:50,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-09-14 00:55:51,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/587 HTTP/1.1" 200 None 2024-09-14 00:55:51,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742 HTTP/1.1" 200 None 2024-09-14 00:55:52,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:55:52,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:55:53,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742 HTTP/1.1" 200 None 2024-09-14 00:55:53,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea8f8e2cd52811def9584dc64139b846d5724742?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:55:53,498 [ scc.repo] DEBUG - PR 587 will-moore 'Update licenses.txt' 2024-09-14 00:55:53,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-09-14 00:55:54,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-09-14 00:55:54,386 [ scc.repo] DEBUG # ... Include label: include 2024-09-14 00:55:54,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8 HTTP/1.1" 200 None 2024-09-14 00:55:55,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:55:55,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:55:56,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8 HTTP/1.1" 200 None 2024-09-14 00:55:56,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15d28a393f071234c3a7355829cbc9a4521246f8?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:55:56,873 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-09-14 00:55:57,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583 HTTP/1.1" 200 None 2024-09-14 00:55:57,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583/comments HTTP/1.1" 200 None 2024-09-14 00:55:57,778 [ scc.repo] DEBUG # ... Include label: include 2024-09-14 00:55:58,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4 HTTP/1.1" 200 None 2024-09-14 00:55:58,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:55:59,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:55:59,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4 HTTP/1.1" 200 None 2024-09-14 00:56:00,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/767908ccac79aaeebd261b698f6f56d5bd95beb4?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:56:00,189 [ scc.repo] DEBUG - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-14 00:56:00,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-09-14 00:56:01,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-09-14 00:56:01,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-09-14 00:56:01,617 [ scc.repo] DEBUG # ... Include label: include 2024-09-14 00:56:02,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0 HTTP/1.1" 200 None 2024-09-14 00:56:02,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:56:03,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:56:03,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0 HTTP/1.1" 200 None 2024-09-14 00:56:03,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:56:03,909 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-09-14 00:56:04,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-09-14 00:56:04,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-09-14 00:56:04,892 [ scc.repo] DEBUG # ... Include label: include 2024-09-14 00:56:05,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7 HTTP/1.1" 200 None 2024-09-14 00:56:05,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:56:06,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:56:06,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7 HTTP/1.1" 200 None 2024-09-14 00:56:07,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/05cc29816c5dc4252e0704936ab7463bd719dab7?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:56:07,221 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-09-14 00:56:07,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-09-14 00:56:08,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-09-14 00:56:08,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-14 00:56:09,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:56:09,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:56:10,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-14 00:56:10,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:56:10,431 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-14 00:56:10,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-09-14 00:56:11,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-09-14 00:56:11,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-09-14 00:56:12,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:56:12,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:56:13,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-09-14 00:56:13,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:56:13,708 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-09-14 00:56:13,708 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:56:13,708 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-14 00:56:13,709 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:56:13,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:13,714 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:56:13,721 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:56:13,721 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:56:13,727 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:56:13,734 [ scc.git] DEBUG Already up to date. 2024-09-14 00:56:13,734 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-09-14 00:56:14,756 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-14 00:56:14,756 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-09-14 00:56:14,761 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-09-14 00:56:15,101 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-14 00:56:15,101 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-09-14 00:56:15,106 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-09-14 00:56:15,775 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-14 00:56:15,776 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-09-14 00:56:15,781 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-09-14 00:56:16,323 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-14 00:56:16,324 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-09-14 00:56:16,328 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head' 2024-09-14 00:56:17,828 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-14 00:56:17,829 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD 2024-09-14 00:56:17,835 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-09-14 00:56:18,124 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-14 00:56:18,125 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-09-14 00:56:18,130 [ scc.git] DEBUG Calling 'git fetch origin pull/587/head' 2024-09-14 00:56:18,550 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-14 00:56:18,550 [ scc.git] DEBUG * branch refs/pull/587/head -> FETCH_HEAD 2024-09-14 00:56:18,553 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:56:18,553 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:56:18,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:18,558 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-09-14 00:56:18,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:18,571 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-09-14 00:56:19,531 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-14 00:56:19,531 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-14 00:56:19,531 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-14 00:56:19,531 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-09-14 00:56:19,531 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-14 00:56:19,531 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:56:19,538 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-09-14 00:56:19,538 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-09-14 00:56:19,538 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-09-14 00:56:19,538 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-09-14 00:56:19,538 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-09-14 00:56:19,538 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-09-14 00:56:19,538 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-09-14 00:56:19,539 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-09-14 00:56:19,539 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-09-14 00:56:19,539 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-09-14 00:56:19,539 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-09-14 00:56:19,539 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-09-14 00:56:19,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:56:19,670 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-14 00:56:19,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:19,686 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-14 00:56:19,831 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:56:19,834 [ scc.git] DEBUG setup.py | 2 +- 2024-09-14 00:56:19,834 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-14 00:56:20,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:56:20,058 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-14 00:56:20,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:20,071 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-14 00:56:20,547 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-14 00:56:20,547 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-14 00:56:20,547 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-14 00:56:20,547 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2024-09-14 00:56:20,547 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-14 00:56:20,547 [ scc.git] DEBUG Auto-merging src/templates/shapes/shape_toolbar.template.html 2024-09-14 00:56:20,547 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-14 00:56:20,548 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-14 00:56:20,556 [ scc.git] DEBUG Calling 'git reset --hard 22a9d3573b039c0465efae041eb5966d032632dd' 2024-09-14 00:56:20,567 [ scc.git] DEBUG HEAD is now at 22a9d357 merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 2024-09-14 00:56:20,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:56:20,698 [ scc.git] DEBUG Calling 'git merge-base f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-14 00:56:20,706 [ scc.git] DEBUG Calling 'git diff --name-only f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53..f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53' 2024-09-14 00:56:20,711 [ scc.git] INFO - PR 577 Rdornier 'Fill rois' Conflicting PR. Removed from build [OMERO-plugins-push#184](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/consoleText) for more details. Possible conflicts: - PR #555 will-moore 'Points in shape editor' - omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py --conflicts 2024-09-14 00:56:20,717 [ scc.config] DEBUG Found github.token 2024-09-14 00:56:20,717 [ scc.git] DEBUG Adding comment to issue #577. 2024-09-14 00:56:21,537 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 201 2024 2024-09-14 00:56:21,539 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...243ea0cf6ee3b040b93543ddddf0458dd05d8cf0' 2024-09-14 00:56:21,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:21,554 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) 243ea0cf6ee3b040b93543ddddf0458dd05d8cf0' 2024-09-14 00:56:21,962 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-14 00:56:21,962 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-14 00:56:21,962 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-14 00:56:21,971 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:56:21,978 [ scc.git] DEBUG .gitignore | 2 + 2024-09-14 00:56:21,978 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-09-14 00:56:21,978 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-09-14 00:56:21,978 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-09-14 00:56:21,978 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-09-14 00:56:21,978 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-09-14 00:56:21,978 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 1 - 2024-09-14 00:56:21,978 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-09-14 00:56:21,978 [ scc.git] DEBUG 8 files changed, 363 insertions(+), 80 deletions(-) 2024-09-14 00:56:22,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:56:22,110 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...767908ccac79aaeebd261b698f6f56d5bd95beb4' 2024-09-14 00:56:22,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:22,127 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Add Hilo Checkbox for LUT Toggling in Channel Slider View) 767908ccac79aaeebd261b698f6f56d5bd95beb4' 2024-09-14 00:56:22,254 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-14 00:56:22,290 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:56:22,295 [ scc.git] DEBUG src/js/models/panel_model.js | 25 ++++++++++++++--- 2024-09-14 00:56:22,295 [ scc.git] DEBUG src/js/models/undo.js | 3 +- 2024-09-14 00:56:22,295 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 53 ++++++++++++++++++++++++++++++++++-- 2024-09-14 00:56:22,295 [ scc.git] DEBUG src/templates/checkbox_template.html | 4 +++ 2024-09-14 00:56:22,295 [ scc.git] DEBUG 4 files changed, 77 insertions(+), 8 deletions(-) 2024-09-14 00:56:22,295 [ scc.git] DEBUG create mode 100644 src/templates/checkbox_template.html 2024-09-14 00:56:22,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:56:22,490 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15d28a393f071234c3a7355829cbc9a4521246f8' 2024-09-14 00:56:22,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:22,506 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) 15d28a393f071234c3a7355829cbc9a4521246f8' 2024-09-14 00:56:22,525 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:56:22,529 [ scc.git] DEBUG omero_figure/views.py | 130 ++++++++++++++++++++++++++++++++++++------ 2024-09-14 00:56:22,529 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-09-14 00:56:22,530 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-09-14 00:56:22,530 [ scc.git] DEBUG 3 files changed, 124 insertions(+), 26 deletions(-) 2024-09-14 00:56:22,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:56:22,874 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea8f8e2cd52811def9584dc64139b846d5724742' 2024-09-14 00:56:22,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:22,891 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 587 (Update licenses.txt) ea8f8e2cd52811def9584dc64139b846d5724742' 2024-09-14 00:56:22,909 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:56:22,913 [ scc.git] DEBUG licenses.txt | 30 +++++++++++++++++++----------- 2024-09-14 00:56:22,913 [ scc.git] DEBUG 1 file changed, 19 insertions(+), 11 deletions(-) 2024-09-14 00:56:23,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:56:23,260 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:56:23,304 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:56:23,304 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:23,310 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:56:23,356 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:56:23,365 [ scc.git] DEBUG has no local changes 2024-09-14 00:56:23,365 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' - PR 587 will-moore 'Update licenses.txt' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:56:23,376 [ scc.git] DEBUG [detached HEAD fc29e8d5] merge master -Dorg -Ssuccess-only 2024-09-14 00:56:23,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:56:23,377 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:56:23,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-09-14 00:56:24,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-09-14 00:56:24,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-09-14 00:56:25,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-14 00:56:25,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:56:26,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-14 00:56:26,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:56:26,512 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-09-14 00:56:26,512 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:56:26,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-14 00:56:26,512 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:56:26,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:26,519 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:56:26,526 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:56:26,526 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:56:26,533 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:56:26,539 [ scc.git] DEBUG Already up to date. 2024-09-14 00:56:26,540 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-09-14 00:56:26,868 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-09-14 00:56:26,868 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-09-14 00:56:26,873 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:56:26,873 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:56:26,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:26,879 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-14 00:56:26,884 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:26,889 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-14 00:56:26,970 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-09-14 00:56:26,971 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:56:26,974 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-09-14 00:56:26,974 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-09-14 00:56:27,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:56:27,113 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:56:27,154 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:56:27,154 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:27,160 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:56:27,199 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:56:27,205 [ scc.git] DEBUG has no local changes 2024-09-14 00:56:27,205 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:56:27,214 [ scc.git] DEBUG [detached HEAD 9ac6b11] merge master -Dorg -Ssuccess-only 2024-09-14 00:56:27,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:56:27,214 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:56:27,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-09-14 00:56:28,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-09-14 00:56:28,006 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-14 00:56:28,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-14 00:56:29,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:56:29,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:56:30,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-14 00:56:30,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:56:30,500 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-14 00:56:30,500 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:56:30,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-14 00:56:30,501 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:56:30,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:30,507 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:56:30,513 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:56:30,513 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:56:30,519 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:56:30,525 [ scc.git] DEBUG Already up to date. 2024-09-14 00:56:30,525 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-09-14 00:56:30,851 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-09-14 00:56:30,852 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-09-14 00:56:30,857 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:56:30,857 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:56:30,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:30,866 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-14 00:56:30,878 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:30,890 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-14 00:56:30,904 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:56:30,909 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-09-14 00:56:30,909 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-09-14 00:56:31,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:56:31,039 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:56:31,084 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:56:31,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:31,090 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:56:31,132 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:56:31,140 [ scc.git] DEBUG has no local changes 2024-09-14 00:56:31,140 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:56:31,148 [ scc.git] DEBUG [detached HEAD dac1850] merge master -Dorg -Ssuccess-only 2024-09-14 00:56:31,148 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:56:31,149 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:56:31,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-09-14 00:56:32,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-09-14 00:56:32,123 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-14 00:56:32,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-14 00:56:33,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:56:33,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:56:34,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-14 00:56:34,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:56:34,519 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-14 00:56:34,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-09-14 00:56:35,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-09-14 00:56:35,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-14 00:56:36,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:56:36,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:56:37,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-14 00:56:37,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:56:37,667 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-14 00:56:38,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-09-14 00:56:38,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-09-14 00:56:38,558 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-14 00:56:39,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-14 00:56:39,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:56:40,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:56:40,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-14 00:56:41,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:56:41,084 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-14 00:56:41,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-09-14 00:56:41,527 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-14 00:56:42,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-14 00:56:42,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:56:43,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:56:43,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-14 00:56:43,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:56:43,983 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-14 00:56:44,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-09-14 00:56:44,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-09-14 00:56:45,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-14 00:56:45,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:56:46,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:56:46,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-14 00:56:47,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:56:47,272 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-14 00:56:47,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-09-14 00:56:48,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-09-14 00:56:48,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-14 00:56:49,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:56:49,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:56:50,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-14 00:56:50,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:56:50,516 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-09-14 00:56:50,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-09-14 00:56:51,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-09-14 00:56:51,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-14 00:56:52,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:56:52,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-14 00:56:53,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:56:53,121 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-09-14 00:56:53,122 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:56:53,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-14 00:56:53,122 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:56:53,122 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:53,128 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:56:53,133 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:56:53,134 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:56:53,310 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:56:53,317 [ scc.git] DEBUG Already up to date. 2024-09-14 00:56:53,317 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-09-14 00:56:53,935 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-14 00:56:53,935 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-09-14 00:56:53,941 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-09-14 00:56:54,906 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-14 00:56:54,906 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-09-14 00:56:54,916 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-09-14 00:56:55,320 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-14 00:56:55,320 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-09-14 00:56:55,326 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-09-14 00:56:55,604 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-14 00:56:55,604 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-09-14 00:56:55,610 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-09-14 00:56:55,902 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-14 00:56:55,902 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-09-14 00:56:55,907 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-09-14 00:56:56,337 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-14 00:56:56,337 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-09-14 00:56:56,343 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-09-14 00:56:56,620 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-14 00:56:56,620 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-09-14 00:56:56,625 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:56:56,625 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:56:56,626 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:56,632 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-14 00:56:56,639 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:56,644 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-14 00:56:56,764 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-14 00:56:56,764 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:56:56,768 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-09-14 00:56:56,768 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-09-14 00:56:56,768 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-09-14 00:56:56,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:56:56,909 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-14 00:56:56,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:56,924 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-14 00:56:57,236 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-09-14 00:56:57,237 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-14 00:56:57,237 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-14 00:56:57,237 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-09-14 00:56:57,237 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:56:57,243 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-09-14 00:56:57,243 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-09-14 00:56:57,243 [ scc.git] DEBUG src/app/header.html | 5 + 2024-09-14 00:56:57,243 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-09-14 00:56:57,243 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-09-14 00:56:57,243 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-09-14 00:56:57,243 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-09-14 00:56:57,243 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-09-14 00:56:57,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:56:57,377 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-14 00:56:57,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:57,390 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-14 00:56:57,498 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-09-14 00:56:57,499 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:56:57,503 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-09-14 00:56:57,503 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-09-14 00:56:57,503 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-09-14 00:56:57,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:56:57,896 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-14 00:56:57,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:57,960 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-14 00:56:57,999 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:56:58,009 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-09-14 00:56:58,009 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-09-14 00:56:58,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:56:58,274 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-14 00:56:58,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:58,354 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-14 00:56:58,520 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-14 00:56:58,563 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:56:58,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:56:58,698 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-14 00:56:58,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:58,713 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-14 00:56:59,112 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-14 00:56:59,112 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-14 00:56:59,112 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-14 00:56:59,113 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:56:59,118 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-09-14 00:56:59,118 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-09-14 00:56:59,118 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-09-14 00:56:59,118 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-09-14 00:56:59,118 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-09-14 00:56:59,118 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-09-14 00:56:59,118 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-09-14 00:56:59,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:56:59,247 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-14 00:56:59,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:59,300 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-14 00:56:59,413 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-14 00:56:59,466 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:56:59,477 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-09-14 00:56:59,477 [ scc.git] DEBUG package.json | 2 +- 2024-09-14 00:56:59,477 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-09-14 00:56:59,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:56:59,626 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:56:59,667 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:56:59,667 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:56:59,673 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:56:59,712 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:56:59,722 [ scc.git] DEBUG has no local changes 2024-09-14 00:56:59,722 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:56:59,737 [ scc.git] DEBUG [detached HEAD e47ae5b] merge master -Dorg -Ssuccess-only 2024-09-14 00:56:59,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:56:59,737 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:57:00,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-09-14 00:57:00,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-09-14 00:57:01,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-09-14 00:57:01,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-14 00:57:02,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:57:02,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:57:02,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-14 00:57:03,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:57:03,368 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-09-14 00:57:03,369 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:57:03,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-14 00:57:03,369 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:03,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:03,375 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:57:03,380 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:57:03,380 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:57:03,385 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:57:03,391 [ scc.git] DEBUG Already up to date. 2024-09-14 00:57:03,392 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-09-14 00:57:03,691 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-09-14 00:57:03,691 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-09-14 00:57:03,696 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:57:03,696 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:03,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:03,703 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-14 00:57:03,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:03,714 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-14 00:57:03,725 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:57:03,728 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-09-14 00:57:03,729 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-09-14 00:57:03,729 [ scc.git] DEBUG requirements.txt | 2 +- 2024-09-14 00:57:03,729 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-09-14 00:57:03,729 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-09-14 00:57:03,729 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-09-14 00:57:03,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:57:03,865 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:57:03,906 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:03,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:03,912 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:57:03,959 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:57:03,966 [ scc.git] DEBUG has no local changes 2024-09-14 00:57:03,967 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:57:03,975 [ scc.git] DEBUG [detached HEAD 8eeccb3] merge master -Dorg -Ssuccess-only 2024-09-14 00:57:03,976 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:57:03,976 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:57:04,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-09-14 00:57:04,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-09-14 00:57:05,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-09-14 00:57:05,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-14 00:57:06,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:57:06,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-14 00:57:07,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:57:07,146 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-09-14 00:57:07,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-09-14 00:57:08,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-09-14 00:57:08,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-14 00:57:09,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:57:09,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-14 00:57:10,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:57:10,075 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-14 00:57:10,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-09-14 00:57:10,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-09-14 00:57:11,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-14 00:57:11,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:57:12,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-14 00:57:12,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:57:12,731 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-14 00:57:12,731 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:57:12,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-14 00:57:12,732 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:12,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:12,739 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:57:12,745 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:57:12,746 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:57:12,753 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:57:12,759 [ scc.git] DEBUG Already up to date. 2024-09-14 00:57:12,759 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-09-14 00:57:13,254 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-14 00:57:13,255 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-09-14 00:57:13,260 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-09-14 00:57:13,845 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-14 00:57:13,845 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-09-14 00:57:13,853 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-09-14 00:57:14,167 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-14 00:57:14,167 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-09-14 00:57:14,175 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:57:14,175 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:14,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:14,184 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-14 00:57:14,193 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:14,200 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-14 00:57:14,228 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-09-14 00:57:14,228 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-09-14 00:57:14,228 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-14 00:57:14,228 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-14 00:57:14,228 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-14 00:57:14,229 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-14 00:57:14,238 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-14 00:57:14,248 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-14 00:57:14,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:57:14,382 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-14 00:57:14,394 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-14 00:57:14,405 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#184](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-09-14 00:57:14,417 [ scc.config] DEBUG Found github.token 2024-09-14 00:57:14,417 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-09-14 00:57:14,417 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-14 00:57:14,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:14,439 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-14 00:57:14,467 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-14 00:57:14,468 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-14 00:57:14,468 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-09-14 00:57:14,468 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-14 00:57:14,468 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-14 00:57:14,479 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-14 00:57:14,492 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-14 00:57:14,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:57:14,765 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-14 00:57:14,776 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-14 00:57:14,785 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#184](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-09-14 00:57:14,792 [ scc.config] DEBUG Found github.token 2024-09-14 00:57:14,793 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-09-14 00:57:14,793 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-14 00:57:14,802 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:14,810 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-14 00:57:14,837 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:57:14,841 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-09-14 00:57:14,841 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-09-14 00:57:15,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:57:15,151 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:57:15,209 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:15,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:15,216 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:57:15,279 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:57:15,294 [ scc.git] DEBUG has no local changes 2024-09-14 00:57:15,294 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:57:15,308 [ scc.git] DEBUG [detached HEAD b48015d] merge master -Dorg -Ssuccess-only 2024-09-14 00:57:15,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:57:15,309 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:57:15,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-09-14 00:57:16,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-09-14 00:57:16,130 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-14 00:57:16,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-14 00:57:17,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:57:17,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:57:18,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-14 00:57:18,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:57:18,653 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-14 00:57:19,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-09-14 00:57:19,126 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-14 00:57:19,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-14 00:57:20,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:57:20,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:57:21,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-14 00:57:21,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:57:21,601 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-14 00:57:22,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-09-14 00:57:22,056 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-14 00:57:22,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-14 00:57:23,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:57:23,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:57:24,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-14 00:57:24,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:57:24,399 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-14 00:57:24,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-09-14 00:57:25,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-09-14 00:57:25,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-09-14 00:57:26,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-09-14 00:57:26,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-09-14 00:57:27,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-09-14 00:57:27,160 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:57:27,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-14 00:57:27,161 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:27,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:27,167 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:57:27,172 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:57:27,172 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:57:27,178 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:57:27,184 [ scc.git] DEBUG Already up to date. 2024-09-14 00:57:27,184 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-09-14 00:57:27,521 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-14 00:57:27,521 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-09-14 00:57:27,526 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-09-14 00:57:27,822 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-14 00:57:27,822 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-09-14 00:57:27,827 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-09-14 00:57:28,112 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-14 00:57:28,113 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-09-14 00:57:28,118 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:57:28,118 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:28,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:28,124 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-14 00:57:28,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:28,137 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-14 00:57:28,147 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:57:28,150 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-09-14 00:57:28,150 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-09-14 00:57:28,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:57:28,274 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-14 00:57:28,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:28,287 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-14 00:57:28,323 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-14 00:57:28,323 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:57:28,327 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-09-14 00:57:28,327 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-09-14 00:57:28,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:57:28,655 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-14 00:57:28,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:28,669 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-14 00:57:28,683 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-14 00:57:28,690 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:57:28,694 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-09-14 00:57:28,694 [ scc.git] DEBUG package.json | 2 +- 2024-09-14 00:57:28,694 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-09-14 00:57:29,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:57:29,028 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:57:29,069 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:29,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:29,075 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:57:29,117 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:57:29,125 [ scc.git] DEBUG has no local changes 2024-09-14 00:57:29,125 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:57:29,135 [ scc.git] DEBUG [detached HEAD 1dccbf5] merge master -Dorg -Ssuccess-only 2024-09-14 00:57:29,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:57:29,135 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:57:29,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-09-14 00:57:29,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-09-14 00:57:30,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-14 00:57:30,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:57:31,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-14 00:57:31,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:57:31,875 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-09-14 00:57:31,875 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:57:31,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-14 00:57:31,876 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:31,876 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:31,881 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:57:31,887 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:57:31,887 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:57:31,892 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:57:31,897 [ scc.git] DEBUG Already up to date. 2024-09-14 00:57:31,897 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-14 00:57:32,215 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-09-14 00:57:32,215 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-14 00:57:32,219 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:57:32,219 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:32,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:32,225 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-14 00:57:32,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:32,235 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-14 00:57:32,244 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:57:32,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:57:32,383 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:57:32,424 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:32,424 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:32,429 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:57:32,467 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:57:32,474 [ scc.git] DEBUG has no local changes 2024-09-14 00:57:32,474 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:57:32,482 [ scc.git] DEBUG [detached HEAD 3f443c8] merge master -Dorg -Ssuccess-only 2024-09-14 00:57:32,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:57:32,482 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:57:32,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-09-14 00:57:33,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-09-14 00:57:33,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-09-14 00:57:34,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-09-14 00:57:34,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-14 00:57:35,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:57:35,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-14 00:57:36,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:57:36,047 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-14 00:57:36,047 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:57:36,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-14 00:57:36,047 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:36,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:36,053 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:57:36,060 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:57:36,060 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:57:36,066 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:57:36,072 [ scc.git] DEBUG Already up to date. 2024-09-14 00:57:36,073 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-09-14 00:57:36,466 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-09-14 00:57:36,467 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-09-14 00:57:36,472 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:57:36,473 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:36,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:36,479 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-14 00:57:36,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:36,492 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-14 00:57:36,503 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-09-14 00:57:36,503 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:57:36,506 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-09-14 00:57:36,506 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-09-14 00:57:36,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:57:36,677 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:57:36,722 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:36,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:36,728 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:57:36,772 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:57:36,779 [ scc.git] DEBUG has no local changes 2024-09-14 00:57:36,779 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:57:36,791 [ scc.git] DEBUG [detached HEAD 3198a17] merge master -Dorg -Ssuccess-only 2024-09-14 00:57:36,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:57:36,792 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:57:37,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-09-14 00:57:37,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-09-14 00:57:38,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-09-14 00:57:38,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-14 00:57:39,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:57:39,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-14 00:57:39,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:57:39,954 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-14 00:57:39,954 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:57:39,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-14 00:57:39,955 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:39,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:39,961 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:57:39,966 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:57:39,967 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:57:39,973 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:57:39,979 [ scc.git] DEBUG Already up to date. 2024-09-14 00:57:39,979 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-14 00:57:40,358 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-09-14 00:57:40,359 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-14 00:57:40,365 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:57:40,365 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:40,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:40,373 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-14 00:57:40,381 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:40,389 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-14 00:57:40,510 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-09-14 00:57:40,511 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-09-14 00:57:40,511 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-09-14 00:57:40,511 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-09-14 00:57:40,511 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-09-14 00:57:40,511 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-09-14 00:57:40,511 [ scc.git] DEBUG Auto-merging setup.py 2024-09-14 00:57:40,511 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-09-14 00:57:40,511 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-14 00:57:40,511 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-14 00:57:40,520 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-14 00:57:40,528 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-14 00:57:40,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:57:40,668 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-14 00:57:40,675 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-14 00:57:40,683 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#184](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/signup_settings.py - setup.py - omero_signup/views.py --conflicts 2024-09-14 00:57:40,690 [ scc.config] DEBUG Found github.token 2024-09-14 00:57:40,690 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-09-14 00:57:40,690 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:57:40,738 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:40,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:40,746 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:57:40,802 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:57:40,814 [ scc.git] DEBUG has no local changes 2024-09-14 00:57:40,815 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:57:40,830 [ scc.git] DEBUG [detached HEAD a3fbf1a] merge master -Dorg -Ssuccess-only 2024-09-14 00:57:40,831 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:57:40,831 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:57:41,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-09-14 00:57:41,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-09-14 00:57:42,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-09-14 00:57:42,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-14 00:57:43,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:57:43,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-14 00:57:43,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:57:43,882 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-14 00:57:43,883 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:57:43,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-14 00:57:43,883 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:43,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:43,890 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:57:43,896 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:57:43,896 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:57:43,902 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:57:43,909 [ scc.git] DEBUG Already up to date. 2024-09-14 00:57:43,909 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-09-14 00:57:44,248 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-09-14 00:57:44,248 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-09-14 00:57:44,254 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:57:44,254 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:44,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:44,260 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-09-14 00:57:44,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:44,275 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-09-14 00:57:44,293 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:57:44,296 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-09-14 00:57:44,296 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-09-14 00:57:44,296 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-09-14 00:57:44,296 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-09-14 00:57:44,296 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-09-14 00:57:44,296 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-09-14 00:57:44,296 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-09-14 00:57:44,296 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-09-14 00:57:44,296 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-09-14 00:57:44,296 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-09-14 00:57:44,296 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-09-14 00:57:44,296 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-09-14 00:57:44,299 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-09-14 00:57:44,299 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-09-14 00:57:44,299 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-09-14 00:57:44,299 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-09-14 00:57:44,299 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-09-14 00:57:44,299 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-09-14 00:57:44,299 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-09-14 00:57:44,299 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-09-14 00:57:44,299 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-09-14 00:57:44,300 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-09-14 00:57:44,300 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-09-14 00:57:44,300 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-09-14 00:57:44,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:57:44,447 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:57:44,490 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:44,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:44,497 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:57:44,542 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:57:44,550 [ scc.git] DEBUG has no local changes 2024-09-14 00:57:44,550 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:57:44,564 [ scc.git] DEBUG [detached HEAD 2225dfd] merge master -Dorg -Ssuccess-only 2024-09-14 00:57:44,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:57:44,566 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:57:44,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-09-14 00:57:44,872 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:57:44,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-14 00:57:44,873 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:44,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:44,879 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:57:44,885 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:57:44,886 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:57:44,892 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:57:44,899 [ scc.git] DEBUG Already up to date. 2024-09-14 00:57:44,900 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:57:44,900 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:44,900 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:44,906 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:57:44,961 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:44,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:44,968 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:57:45,017 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:57:45,024 [ scc.git] DEBUG has no local changes 2024-09-14 00:57:45,025 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:57:45,035 [ scc.git] DEBUG [detached HEAD 5821283] merge master -Dorg -Ssuccess-only 2024-09-14 00:57:45,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:57:45,036 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:57:45,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-09-14 00:57:45,298 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:57:45,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-14 00:57:45,298 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:45,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:45,306 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:57:45,312 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:57:45,312 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:57:45,318 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:57:45,326 [ scc.git] DEBUG Already up to date. 2024-09-14 00:57:45,326 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:57:45,326 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:45,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:45,332 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:57:45,382 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:45,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:45,388 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:57:45,439 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:57:45,446 [ scc.git] DEBUG has no local changes 2024-09-14 00:57:45,446 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:57:45,456 [ scc.git] DEBUG [detached HEAD 40cede5] merge master -Dorg -Ssuccess-only 2024-09-14 00:57:45,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:57:45,457 [ scc.git] INFO Overriding base-branch from master to main 2024-09-14 00:57:45,457 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:57:45,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-09-14 00:57:46,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-09-14 00:57:46,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-09-14 00:57:47,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-09-14 00:57:47,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-14 00:57:48,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:57:48,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-14 00:57:48,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:57:48,964 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-14 00:57:48,964 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:57:48,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-14 00:57:48,964 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:48,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:48,972 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-09-14 00:57:48,978 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:57:48,978 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-09-14 00:57:48,985 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-09-14 00:57:48,991 [ scc.git] DEBUG Already up to date. 2024-09-14 00:57:48,991 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-09-14 00:57:49,362 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-09-14 00:57:49,363 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-09-14 00:57:49,368 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:57:49,368 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:49,368 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:49,375 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-14 00:57:49,381 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:49,388 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-14 00:57:49,422 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-09-14 00:57:49,422 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-09-14 00:57:49,422 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-14 00:57:49,423 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-14 00:57:49,429 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-14 00:57:49,437 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-14 00:57:49,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:57:49,583 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-14 00:57:49,592 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-14 00:57:49,599 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#184](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-09-14 00:57:49,604 [ scc.config] DEBUG Found github.token 2024-09-14 00:57:49,605 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-09-14 00:57:49,605 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:57:49,649 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:49,649 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:49,655 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:57:49,696 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:57:49,703 [ scc.git] DEBUG has no local changes 2024-09-14 00:57:49,703 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:57:49,713 [ scc.git] DEBUG [detached HEAD 2bb91c1] merge master -Dorg -Ssuccess-only 2024-09-14 00:57:49,713 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:57:49,714 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:57:49,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-09-14 00:57:49,993 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:57:49,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-14 00:57:49,993 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:49,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:50,002 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:57:50,010 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:57:50,011 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:57:50,021 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:57:50,030 [ scc.git] DEBUG Already up to date. 2024-09-14 00:57:50,030 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:57:50,030 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:50,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:50,036 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:57:50,082 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:50,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:50,091 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:57:50,143 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:57:50,151 [ scc.git] DEBUG has no local changes 2024-09-14 00:57:50,152 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:57:50,163 [ scc.git] DEBUG [detached HEAD ab73b8f] merge master -Dorg -Ssuccess-only 2024-09-14 00:57:50,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:57:50,164 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:57:50,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-09-14 00:57:50,406 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:57:50,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-14 00:57:50,407 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:50,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:50,413 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:57:50,420 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:57:50,420 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:57:50,428 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:57:50,436 [ scc.git] DEBUG Already up to date. 2024-09-14 00:57:50,436 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:57:50,436 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:50,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:50,443 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:57:50,490 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:50,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:50,498 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:57:50,540 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:57:50,548 [ scc.git] DEBUG has no local changes 2024-09-14 00:57:50,548 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:57:50,661 [ scc.git] DEBUG [detached HEAD e74a4d1] merge master -Dorg -Ssuccess-only 2024-09-14 00:57:50,662 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:57:50,662 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:57:50,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-09-14 00:57:51,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-09-14 00:57:51,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-09-14 00:57:52,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-14 00:57:52,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:57:53,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-14 00:57:53,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:57:53,610 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-09-14 00:57:53,610 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:57:53,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-14 00:57:53,610 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:53,611 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:53,617 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-14 00:57:53,625 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:57:53,625 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-14 00:57:53,633 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-14 00:57:53,641 [ scc.git] DEBUG Already up to date. 2024-09-14 00:57:53,641 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-09-14 00:57:54,069 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-09-14 00:57:54,069 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-09-14 00:57:54,075 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:57:54,075 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:54,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:54,082 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-14 00:57:54,092 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:54,101 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-14 00:57:54,239 [ scc.git] DEBUG Auto-merging Dockerfile 2024-09-14 00:57:54,239 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-09-14 00:57:54,239 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-14 00:57:54,240 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-14 00:57:54,246 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-14 00:57:54,254 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-14 00:57:54,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:57:54,386 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-14 00:57:54,394 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-14 00:57:54,401 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#184](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-09-14 00:57:54,408 [ scc.config] DEBUG Found github.token 2024-09-14 00:57:54,408 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-09-14 00:57:54,409 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:57:54,451 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:57:54,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:57:54,458 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:57:54,529 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:57:54,539 [ scc.git] DEBUG has no local changes 2024-09-14 00:57:54,539 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:57:54,554 [ scc.git] DEBUG [detached HEAD 01ee093] merge master -Dorg -Ssuccess-only 2024-09-14 00:57:54,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:57:54,555 [ scc.git] INFO Overriding base-branch from master to develop 2024-09-14 00:57:54,555 [ scc.repo] DEBUG ## PRs found: 2024-09-14 00:57:54,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-09-14 00:57:55,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-09-14 00:57:55,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-09-14 00:57:56,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:57:56,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-14 00:57:57,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-09-14 00:57:57,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:57:57,582 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-09-14 00:57:58,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-09-14 00:57:58,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-09-14 00:57:59,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-09-14 00:57:59,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-09-14 00:58:00,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-09-14 00:58:00,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-09-14 00:58:00,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-14 00:58:01,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-14 00:58:01,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-14 00:58:02,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-09-14 00:58:02,100 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-14 00:58:02,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-09-14 00:58:03,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-09-14 00:58:03,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-09-14 00:58:03,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-09-14 00:58:03,968 [ scc.repo] DEBUG ## Branches found: 2024-09-14 00:58:03,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-14 00:58:03,969 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:58:03,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:58:03,976 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-09-14 00:58:03,984 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-14 00:58:03,984 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-09-14 00:58:03,993 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-09-14 00:58:04,002 [ scc.git] DEBUG Already up to date. 2024-09-14 00:58:04,002 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-09-14 00:58:04,595 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-09-14 00:58:04,595 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-09-14 00:58:04,603 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-09-14 00:58:05,065 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-09-14 00:58:05,065 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-09-14 00:58:05,068 [ scc.git] DEBUG ## Unique users: [] 2024-09-14 00:58:05,068 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:58:05,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:58:05,076 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-14 00:58:05,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:58:05,092 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-14 00:58:05,215 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-09-14 00:58:05,215 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-09-14 00:58:05,215 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-14 00:58:05,216 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-14 00:58:05,226 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-14 00:58:05,235 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-14 00:58:05,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:05,366 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-14 00:58:05,376 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-14 00:58:05,384 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#184](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-09-14 00:58:05,392 [ scc.config] DEBUG Found github.token 2024-09-14 00:58:05,392 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-09-14 00:58:05,392 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-09-14 00:58:05,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:58:05,409 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-09-14 00:58:05,423 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-14 00:58:05,426 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-09-14 00:58:05,427 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-09-14 00:58:05,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:05,750 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-14 00:58:05,803 [ scc.git] DEBUG Get sha1 of %s 2024-09-14 00:58:05,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-14 00:58:05,814 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:58:05,868 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:58:05,877 [ scc.git] DEBUG has no local changes 2024-09-14 00:58:05,878 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:58:05,892 [ scc.git] DEBUG [detached HEAD ed3239e] merge master -Dorg -Ssuccess-only 2024-09-14 00:58:05,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:05,893 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-14 00:58:06,000 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-09-14 00:58:06,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:06,174 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-09-14 00:58:06,180 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-09-14 00:58:06,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:06,568 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-09-14 00:58:06,577 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-09-14 00:58:06,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:06,960 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-09-14 00:58:06,967 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-09-14 00:58:07,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:07,356 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-09-14 00:58:07,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:07,726 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-09-14 00:58:07,733 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-09-14 00:58:08,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:08,100 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-09-14 00:58:08,105 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-09-14 00:58:08,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:08,480 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-09-14 00:58:08,487 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-09-14 00:58:08,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:08,869 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-09-14 00:58:08,875 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-09-14 00:58:09,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:09,263 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-09-14 00:58:09,269 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-09-14 00:58:09,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:09,638 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-09-14 00:58:09,645 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-09-14 00:58:10,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:10,039 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-09-14 00:58:10,044 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-09-14 00:58:10,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:10,423 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-09-14 00:58:10,437 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-09-14 00:58:10,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:10,818 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-09-14 00:58:11,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:11,208 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-09-14 00:58:11,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:11,613 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-09-14 00:58:11,631 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-09-14 00:58:11,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:11,990 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-09-14 00:58:12,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:12,368 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-09-14 00:58:12,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:12,745 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-09-14 00:58:12,752 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-09-14 00:58:13,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:13,135 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-09-14 00:58:13,142 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-09-14 00:58:13,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:13,520 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-09-14 00:58:13,529 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-09-14 00:58:13,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:13,910 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-09-14 00:58:13,918 [ scc.config] DEBUG Found submodule.scripts.url 2024-09-14 00:58:14,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-14 00:58:14,298 [ scc.config] DEBUG Found submodule.scripts.branch 2024-09-14 00:58:14,299 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-14 00:58:14,379 [ scc.git] DEBUG has local changes 2024-09-14 00:58:14,380 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' - PR 587 will-moore 'Update licenses.txt' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#184 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/184/)' 2024-09-14 00:58:14,718 [ scc.git] DEBUG [detached HEAD 3e17f74] merge master -Dorg -Ssuccess-only 2024-09-14 00:58:14,718 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-09-14 00:58:14,718 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-14 00:58:14,718 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,718 [ scc.merge] INFO 2024-09-14 00:58:14,719 [ scc.merge] INFO Merged PRs: 2024-09-14 00:58:14,719 [ scc.merge] INFO - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-14 00:58:14,719 [ scc.merge] INFO 2024-09-14 00:58:14,719 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-09-14 00:58:14,719 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,719 [ scc.merge] INFO 2024-09-14 00:58:14,719 [ scc.merge] INFO Merged PRs: 2024-09-14 00:58:14,719 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-09-14 00:58:14,719 [ scc.merge] INFO 2024-09-14 00:58:14,719 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-09-14 00:58:14,719 [ scc.merge] INFO Excluded PRs: 2024-09-14 00:58:14,719 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-09-14 00:58:14,719 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,719 [ scc.merge] INFO 2024-09-14 00:58:14,719 [ scc.merge] INFO Merged PRs: 2024-09-14 00:58:14,719 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-09-14 00:58:14,719 [ scc.merge] INFO 2024-09-14 00:58:14,719 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-09-14 00:58:14,719 [ scc.merge] INFO Excluded PRs: 2024-09-14 00:58:14,719 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-09-14 00:58:14,719 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-09-14 00:58:14,719 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-09-14 00:58:14,719 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-09-14 00:58:14,719 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,719 [ scc.merge] INFO 2024-09-14 00:58:14,719 [ scc.merge] INFO Merged PRs: 2024-09-14 00:58:14,719 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-09-14 00:58:14,719 [ scc.merge] INFO 2024-09-14 00:58:14,719 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-09-14 00:58:14,719 [ scc.merge] INFO Excluded PRs: 2024-09-14 00:58:14,719 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-14 00:58:14,719 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,719 [ scc.merge] INFO 2024-09-14 00:58:14,719 [ scc.merge] INFO Merged PRs: 2024-09-14 00:58:14,719 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-09-14 00:58:14,719 [ scc.merge] INFO 2024-09-14 00:58:14,720 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-14 00:58:14,720 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-09-14 00:58:14,720 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-14 00:58:14,720 [ scc.merge] INFO 2024-09-14 00:58:14,720 [ scc.merge] INFO Repository: ome/omero-figure 2024-09-14 00:58:14,720 [ scc.merge] INFO Excluded PRs: 2024-09-14 00:58:14,720 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-09-14 00:58:14,720 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-09-14 00:58:14,720 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,720 [ scc.merge] INFO 2024-09-14 00:58:14,720 [ scc.merge] INFO Merged PRs: 2024-09-14 00:58:14,720 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-09-14 00:58:14,720 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-14 00:58:14,720 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-09-14 00:58:14,720 [ scc.merge] INFO - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-14 00:58:14,720 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-09-14 00:58:14,720 [ scc.merge] INFO - PR 587 will-moore 'Update licenses.txt' 2024-09-14 00:58:14,720 [ scc.merge] INFO 2024-09-14 00:58:14,720 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-14 00:58:14,720 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-09-14 00:58:14,720 [ scc.merge] INFO 2024-09-14 00:58:14,720 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-09-14 00:58:14,720 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,720 [ scc.merge] INFO 2024-09-14 00:58:14,720 [ scc.merge] INFO Merged PRs: 2024-09-14 00:58:14,720 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-09-14 00:58:14,720 [ scc.merge] INFO 2024-09-14 00:58:14,720 [ scc.merge] INFO Repository: ome/omero-gallery 2024-09-14 00:58:14,720 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,720 [ scc.merge] INFO 2024-09-14 00:58:14,720 [ scc.merge] INFO Merged PRs: 2024-09-14 00:58:14,720 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-14 00:58:14,720 [ scc.merge] INFO 2024-09-14 00:58:14,720 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-09-14 00:58:14,720 [ scc.merge] INFO Excluded PRs: 2024-09-14 00:58:14,720 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-09-14 00:58:14,720 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-09-14 00:58:14,721 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-09-14 00:58:14,721 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,721 [ scc.merge] INFO 2024-09-14 00:58:14,721 [ scc.merge] INFO Merged PRs: 2024-09-14 00:58:14,721 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-09-14 00:58:14,721 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-09-14 00:58:14,721 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-14 00:58:14,721 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-14 00:58:14,721 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-14 00:58:14,721 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-14 00:58:14,721 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-14 00:58:14,721 [ scc.merge] INFO 2024-09-14 00:58:14,721 [ scc.merge] INFO Repository: ome/omero-mapr 2024-09-14 00:58:14,721 [ scc.merge] INFO Excluded PRs: 2024-09-14 00:58:14,721 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-09-14 00:58:14,721 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,721 [ scc.merge] INFO 2024-09-14 00:58:14,721 [ scc.merge] INFO Merged PRs: 2024-09-14 00:58:14,721 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-09-14 00:58:14,721 [ scc.merge] INFO 2024-09-14 00:58:14,721 [ scc.merge] INFO Repository: ome/omero-metadata 2024-09-14 00:58:14,721 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,721 [ scc.merge] INFO 2024-09-14 00:58:14,721 [ scc.merge] INFO Merged PRs: 2024-09-14 00:58:14,721 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-09-14 00:58:14,721 [ scc.merge] INFO 2024-09-14 00:58:14,721 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-14 00:58:14,721 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-14 00:58:14,721 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-14 00:58:14,721 [ scc.merge] INFO 2024-09-14 00:58:14,721 [ scc.merge] INFO Repository: ome/omero-parade 2024-09-14 00:58:14,721 [ scc.merge] INFO Excluded PRs: 2024-09-14 00:58:14,721 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-09-14 00:58:14,721 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-09-14 00:58:14,721 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-09-14 00:58:14,721 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,721 [ scc.merge] INFO 2024-09-14 00:58:14,722 [ scc.merge] INFO Merged PRs: 2024-09-14 00:58:14,722 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-14 00:58:14,722 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-14 00:58:14,722 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-14 00:58:14,722 [ scc.merge] INFO 2024-09-14 00:58:14,722 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-09-14 00:58:14,722 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,722 [ scc.merge] INFO 2024-09-14 00:58:14,722 [ scc.merge] INFO Merged PRs: 2024-09-14 00:58:14,722 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-09-14 00:58:14,722 [ scc.merge] INFO 2024-09-14 00:58:14,722 [ scc.merge] INFO Repository: ome/omero-rois 2024-09-14 00:58:14,722 [ scc.merge] INFO Excluded PRs: 2024-09-14 00:58:14,722 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-14 00:58:14,722 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,722 [ scc.merge] INFO 2024-09-14 00:58:14,722 [ scc.merge] INFO Merged PRs: 2024-09-14 00:58:14,722 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-14 00:58:14,722 [ scc.merge] INFO 2024-09-14 00:58:14,722 [ scc.merge] INFO Repository: ome/omero-signup 2024-09-14 00:58:14,722 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,722 [ scc.merge] INFO 2024-09-14 00:58:14,722 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-14 00:58:14,722 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-14 00:58:14,722 [ scc.merge] INFO 2024-09-14 00:58:14,722 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-09-14 00:58:14,722 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,722 [ scc.merge] INFO 2024-09-14 00:58:14,722 [ scc.merge] INFO Merged PRs: 2024-09-14 00:58:14,722 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-14 00:58:14,722 [ scc.merge] INFO 2024-09-14 00:58:14,722 [ scc.merge] INFO Repository: ome/omero-upload 2024-09-14 00:58:14,722 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,722 [ scc.merge] INFO 2024-09-14 00:58:14,722 [ scc.merge] INFO 2024-09-14 00:58:14,722 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-09-14 00:58:14,722 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,723 [ scc.merge] INFO 2024-09-14 00:58:14,723 [ scc.merge] INFO 2024-09-14 00:58:14,723 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-09-14 00:58:14,723 [ scc.merge] INFO Excluded PRs: 2024-09-14 00:58:14,723 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-09-14 00:58:14,723 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,723 [ scc.merge] INFO 2024-09-14 00:58:14,723 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-14 00:58:14,723 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-14 00:58:14,723 [ scc.merge] INFO 2024-09-14 00:58:14,723 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-09-14 00:58:14,723 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,723 [ scc.merge] INFO 2024-09-14 00:58:14,723 [ scc.merge] INFO 2024-09-14 00:58:14,723 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-09-14 00:58:14,723 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,723 [ scc.merge] INFO 2024-09-14 00:58:14,723 [ scc.merge] INFO 2024-09-14 00:58:14,723 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-09-14 00:58:14,723 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,723 [ scc.merge] INFO 2024-09-14 00:58:14,723 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-14 00:58:14,723 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-09-14 00:58:14,723 [ scc.merge] INFO 2024-09-14 00:58:14,723 [ scc.merge] INFO Repository: ome/scripts 2024-09-14 00:58:14,723 [ scc.merge] INFO Excluded PRs: 2024-09-14 00:58:14,723 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-09-14 00:58:14,723 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-09-14 00:58:14,723 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-09-14 00:58:14,723 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-09-14 00:58:14,723 [ scc.merge] INFO Already up to date. 2024-09-14 00:58:14,723 [ scc.merge] INFO 2024-09-14 00:58:14,723 [ scc.merge] INFO Merged PRs: 2024-09-14 00:58:14,723 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-09-14 00:58:14,723 [ scc.merge] INFO 2024-09-14 00:58:14,723 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-14 00:58:14,723 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-14 00:58:14,724 [ scc.merge] INFO 2024-09-14 00:58:14,724 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-14 00:58:14,724 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,730 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-14 00:58:14,730 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,736 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,736 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-14 00:58:14,736 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-14 00:58:14,744 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-14 00:58:14,753 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-14 00:58:14,762 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,772 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-14 00:58:14,773 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-14 00:58:14,782 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,792 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,792 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-14 00:58:14,792 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,802 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,802 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-14 00:58:14,802 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-14 00:58:14,811 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-14 00:58:14,821 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,829 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-14 00:58:14,830 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,838 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-14 00:58:14,838 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-14 00:58:14,845 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,856 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-14 00:58:14,856 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-14 00:58:14,863 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,869 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-14 00:58:14,869 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,875 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-14 00:58:14,875 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-14 00:58:14,893 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-14 00:58:14,901 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-14 00:58:14,908 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-14 00:58:14,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-14 00:58:14,914 [ scc.git] DEBUG Calling 'git remote' 2024-09-14 00:58:14,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD ef8181d] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from f9a321dd nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD c311685] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-14 00:59:03,761 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-14 00:59:12,482 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-14 00:59:14,764 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-14 00:59:19,178 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-14 00:59:58,539 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS