Started by upstream project "Trigger" build number 220 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 189 [Pipeline] sh > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.3.2 cryptography-43.0.1 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-09-22 00:40:57,448 [ scc.config] DEBUG Found github.token 2024-09-22 00:40:57,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-22 00:40:57,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:40:58,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:40:58,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-22 00:40:58,397 [ scc.gh] DEBUG 4024 remaining from 5000 (Reset at 00:09 2024-09-22 00:40:58,398 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:40:58,402 [ scc.git] DEBUG Check current status 2024-09-22 00:40:58,403 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:40:58,406 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-22 00:40:58,407 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:40:58,451 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-22 00:40:58,453 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-22 00:40:58,456 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-22 00:40:58,458 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-22 00:40:58,462 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-22 00:40:58,465 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-22 00:40:58,469 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-22 00:40:58,494 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-22 00:40:58,497 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-22 00:40:58,500 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-22 00:40:58,503 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-22 00:40:58,505 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-22 00:40:58,508 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-22 00:40:58,511 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-22 00:40:58,529 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-22 00:40:58,532 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-22 00:40:58,535 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-22 00:40:58,537 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-22 00:40:58,540 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-22 00:40:58,542 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-22 00:40:58,545 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-22 00:40:58,549 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-22 00:40:58,554 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:40:58,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-22 00:40:59,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:40:59,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:00,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:00,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:00,578 [ scc.git] DEBUG Resetting... 2024-09-22 00:41:00,578 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-22 00:41:00,589 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-22 00:41:00,589 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-22 00:41:00,703 [ scc.git] DEBUG Check current status 2024-09-22 00:41:00,703 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:00,708 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-22 00:41:00,708 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:00,759 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-22 00:41:00,762 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-22 00:41:00,765 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-22 00:41:00,769 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-22 00:41:00,774 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-22 00:41:00,778 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-22 00:41:00,781 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-22 00:41:00,785 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-22 00:41:00,789 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-22 00:41:00,793 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-22 00:41:00,797 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-22 00:41:00,800 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-22 00:41:00,804 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-22 00:41:00,807 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-22 00:41:00,810 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-22 00:41:00,813 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-22 00:41:00,816 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-22 00:41:00,818 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-22 00:41:00,821 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-22 00:41:00,823 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-22 00:41:00,826 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-22 00:41:00,830 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-22 00:41:00,830 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-22 00:41:00,831 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-22 00:41:00,831 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-22 00:41:00,831 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-22 00:41:00,831 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-22 00:41:00,831 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:41:01,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-22 00:41:01,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/390 HTTP/1.1" 200 None 2024-09-22 00:41:01,509 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-22 00:41:01,509 [ scc.repo] DEBUG - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-22 00:41:01,509 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:41:01,509 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:41:01,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:41:01,514 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:41:01,519 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:41:01,519 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:41:01,524 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:41:01,529 [ scc.git] DEBUG Already up to date. 2024-09-22 00:41:01,529 [ scc.git] DEBUG Calling 'git fetch origin pull/390/head' 2024-09-22 00:41:01,854 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-22 00:41:01,854 [ scc.git] DEBUG * branch refs/pull/390/head -> FETCH_HEAD 2024-09-22 00:41:01,860 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:41:01,861 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:41:01,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:41:01,866 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-22 00:41:01,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:41:01,875 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 390 (Bump omero-figure from `5f62399` to `f9a321d`) 89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-22 00:41:01,891 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:41:01,894 [ scc.git] DEBUG omero-figure | 2 +- 2024-09-22 00:41:01,894 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-22 00:41:02,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:41:02,027 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:41:02,113 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53' 2024-09-22 00:41:02,114 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:41:02,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:41:02,119 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:41:03,061 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f21206e6b80> has no local changes 2024-09-22 00:41:03,061 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:41:03,145 [ scc.git] DEBUG [detached HEAD f152aae] merge master -Dorg -Snone 2024-09-22 00:41:03,145 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-22 00:41:03,145 [ scc.merge] INFO Already up to date. 2024-09-22 00:41:03,145 [ scc.merge] INFO 2024-09-22 00:41:03,145 [ scc.merge] INFO Merged PRs: 2024-09-22 00:41:03,145 [ scc.merge] INFO - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-22 00:41:03,145 [ scc.merge] INFO 2024-09-22 00:41:03,145 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-22 00:41:03,145 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-09-22 00:41:10,900 [ scc.config] DEBUG Found github.token 2024-09-22 00:41:10,903 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-22 00:41:11,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:41:11,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:41:11,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-22 00:41:11,835 [ scc.gh] DEBUG 4014 remaining from 5000 (Reset at 00:09 2024-09-22 00:41:11,835 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:11,839 [ scc.git] DEBUG Check current status 2024-09-22 00:41:11,839 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:11,843 [ scc.git] DEBUG f152aae merge master -Dorg -Snone 2024-09-22 00:41:11,843 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:11,887 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-22 00:41:11,889 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-22 00:41:11,892 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-22 00:41:11,895 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-22 00:41:11,921 [ scc.git] DEBUG f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 omero-figure (v7.1.0-23-gf9a321dd) 2024-09-22 00:41:11,924 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-22 00:41:11,927 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-22 00:41:11,930 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-22 00:41:11,933 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-22 00:41:11,936 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-22 00:41:11,938 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-22 00:41:11,940 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-22 00:41:11,943 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-22 00:41:11,946 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-22 00:41:11,949 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-22 00:41:11,952 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-22 00:41:11,954 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-22 00:41:11,956 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-22 00:41:11,959 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-22 00:41:11,961 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-22 00:41:11,964 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-22 00:41:11,967 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-22 00:41:11,971 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:11,972 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-09-22 00:41:11,974 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-09-22 00:41:12,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-22 00:41:12,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:13,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:13,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:13,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:13,943 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:14,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-22 00:41:14,021 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:14,025 [ scc.git] DEBUG Check current status 2024-09-22 00:41:14,026 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:14,030 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-09-22 00:41:14,031 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:14,077 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:14,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-09-22 00:41:14,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:15,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:15,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:16,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:16,240 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:16,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:16,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-22 00:41:16,280 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:16,284 [ scc.git] DEBUG Check current status 2024-09-22 00:41:16,285 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:16,289 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-09-22 00:41:16,289 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:16,336 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:16,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-09-22 00:41:17,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:17,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:17,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:18,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:18,348 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:18,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:18,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-22 00:41:18,386 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:18,390 [ scc.git] DEBUG Check current status 2024-09-22 00:41:18,390 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:18,394 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-09-22 00:41:18,394 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:18,436 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:18,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-09-22 00:41:19,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:19,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:20,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:20,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:20,471 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:20,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:20,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-22 00:41:20,510 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:20,514 [ scc.git] DEBUG Check current status 2024-09-22 00:41:20,514 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:20,517 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-22 00:41:20,518 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:20,558 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:20,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-09-22 00:41:21,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:21,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:22,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:22,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:22,596 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:22,638 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:22,640 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-22 00:41:22,640 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:22,644 [ scc.git] DEBUG Check current status 2024-09-22 00:41:22,644 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:22,663 [ scc.git] DEBUG f9a321dd Merge pull request #549 from will-moore/inset_feature 2024-09-22 00:41:22,663 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:22,709 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:23,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-09-22 00:41:23,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:23,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:24,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:24,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:24,710 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:24,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:24,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-22 00:41:24,748 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:24,753 [ scc.git] DEBUG Check current status 2024-09-22 00:41:24,753 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:24,757 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-22 00:41:24,757 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:24,796 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:25,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-09-22 00:41:25,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:26,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:26,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:26,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:26,790 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:26,829 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:26,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-22 00:41:26,830 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:26,834 [ scc.git] DEBUG Check current status 2024-09-22 00:41:26,834 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:26,837 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-09-22 00:41:26,838 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:26,877 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:27,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-09-22 00:41:27,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:28,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:28,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:28,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:28,936 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:28,982 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:28,984 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-22 00:41:28,984 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:28,990 [ scc.git] DEBUG Check current status 2024-09-22 00:41:28,990 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:28,996 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-09-22 00:41:28,996 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:29,045 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:29,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-09-22 00:41:29,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:30,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:30,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:31,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:31,122 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:31,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:31,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-22 00:41:31,161 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:31,165 [ scc.git] DEBUG Check current status 2024-09-22 00:41:31,165 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:31,169 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-09-22 00:41:31,169 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:31,211 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:31,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-09-22 00:41:32,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:32,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:32,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:33,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:33,298 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:33,340 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:33,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-22 00:41:33,341 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:33,345 [ scc.git] DEBUG Check current status 2024-09-22 00:41:33,345 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:33,350 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-22 00:41:33,350 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:33,393 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:33,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-09-22 00:41:34,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:34,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:35,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:35,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:35,592 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:35,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:35,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-22 00:41:35,633 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:35,638 [ scc.git] DEBUG Check current status 2024-09-22 00:41:35,638 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:35,643 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-09-22 00:41:35,643 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:35,687 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:36,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-09-22 00:41:36,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:36,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:37,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:37,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:37,701 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:37,745 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:37,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-22 00:41:37,747 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:37,753 [ scc.git] DEBUG Check current status 2024-09-22 00:41:37,753 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:37,759 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-09-22 00:41:37,760 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:37,805 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:38,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-09-22 00:41:38,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:39,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:39,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:39,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:39,821 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:39,859 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:39,860 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-22 00:41:39,860 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:39,865 [ scc.git] DEBUG Check current status 2024-09-22 00:41:39,866 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:39,870 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-09-22 00:41:39,870 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:39,928 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:40,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-09-22 00:41:40,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:41,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:41,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:41,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:41,947 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:41,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:41,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-22 00:41:41,989 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:41,994 [ scc.git] DEBUG Check current status 2024-09-22 00:41:41,994 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:41,999 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-22 00:41:42,000 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:42,053 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:42,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-09-22 00:41:42,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:43,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:43,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:44,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:44,036 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:44,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:44,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-22 00:41:44,076 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:44,081 [ scc.git] DEBUG Check current status 2024-09-22 00:41:44,081 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:44,086 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-09-22 00:41:44,086 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:44,132 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:44,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-22 00:41:44,445 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-22 00:41:44,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-09-22 00:41:45,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:45,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:45,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:46,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:46,324 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:46,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:46,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-22 00:41:46,365 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:46,370 [ scc.git] DEBUG Check current status 2024-09-22 00:41:46,370 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:46,374 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-09-22 00:41:46,375 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:46,420 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:46,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-09-22 00:41:47,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:47,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:48,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:48,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:48,479 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:48,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:48,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-22 00:41:48,527 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:48,533 [ scc.git] DEBUG Check current status 2024-09-22 00:41:48,533 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:48,538 [ scc.git] DEBUG deab817 update setup-python to v4 2024-09-22 00:41:48,538 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:48,584 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:48,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-09-22 00:41:49,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:49,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:50,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:50,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:50,591 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:50,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:50,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-22 00:41:50,633 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:50,639 [ scc.git] DEBUG Check current status 2024-09-22 00:41:50,639 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:50,644 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-22 00:41:50,645 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:50,687 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:50,688 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-09-22 00:41:51,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-09-22 00:41:51,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:51,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:52,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:52,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:52,871 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:52,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:52,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-22 00:41:52,914 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:52,920 [ scc.git] DEBUG Check current status 2024-09-22 00:41:52,920 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:52,926 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-22 00:41:52,926 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:52,977 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:53,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-22 00:41:53,270 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-22 00:41:53,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-09-22 00:41:53,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:54,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:54,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:55,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:55,282 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:55,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:55,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-22 00:41:55,345 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:55,356 [ scc.git] DEBUG Check current status 2024-09-22 00:41:55,357 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:55,363 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-09-22 00:41:55,364 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:55,415 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:55,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-22 00:41:55,691 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-22 00:41:55,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-09-22 00:41:56,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:56,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:57,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:57,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:57,560 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:57,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:57,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-22 00:41:57,602 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:57,608 [ scc.git] DEBUG Check current status 2024-09-22 00:41:57,608 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:57,614 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-22 00:41:57,614 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:57,661 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:58,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-09-22 00:41:58,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:41:58,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:41:59,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:41:59,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:41:59,799 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:41:59,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:41:59,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-22 00:41:59,855 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-22 00:41:59,861 [ scc.git] DEBUG Check current status 2024-09-22 00:41:59,861 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:41:59,878 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-22 00:41:59,878 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:41:59,924 [ scc.config] DEBUG Found remote.origin.url 2024-09-22 00:41:59,925 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-09-22 00:42:00,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-22 00:42:00,201 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-22 00:42:00,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-09-22 00:42:00,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-22 00:42:01,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-22 00:42:01,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-22 00:42:02,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-22 00:42:02,043 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:42:02,081 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:42:02,081 [ scc.git] DEBUG Resetting... 2024-09-22 00:42:02,081 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-22 00:42:02,091 [ scc.git] DEBUG HEAD is now at f152aae merge master -Dorg -Snone 2024-09-22 00:42:02,091 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-22 00:42:02,192 [ scc.git] DEBUG Check current status 2024-09-22 00:42:02,192 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-22 00:42:02,199 [ scc.git] DEBUG f152aae merge master -Dorg -Snone 2024-09-22 00:42:02,199 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-22 00:42:02,247 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-22 00:42:02,249 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-22 00:42:02,252 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-22 00:42:02,255 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-22 00:42:02,264 [ scc.git] DEBUG f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 omero-figure (v7.1.0-23-gf9a321dd) 2024-09-22 00:42:02,267 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-22 00:42:02,270 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-22 00:42:02,274 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-22 00:42:02,276 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-22 00:42:02,279 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-22 00:42:02,282 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-22 00:42:02,285 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-22 00:42:02,288 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-22 00:42:02,290 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-22 00:42:02,293 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-22 00:42:02,296 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-22 00:42:02,298 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-22 00:42:02,301 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-22 00:42:02,303 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-22 00:42:02,306 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-22 00:42:02,309 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-22 00:42:02,312 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-22 00:42:02,313 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-22 00:42:02,313 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-22 00:42:02,314 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-22 00:42:02,314 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-22 00:42:02,314 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-22 00:42:02,314 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-09-22 00:42:02,314 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:42:02,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-22 00:42:03,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/390 HTTP/1.1" 200 None 2024-09-22 00:42:03,033 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-22 00:42:03,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518 HTTP/1.1" 200 None 2024-09-22 00:42:03,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:42:04,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518 HTTP/1.1" 200 None 2024-09-22 00:42:04,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:42:04,950 [ scc.repo] DEBUG - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-22 00:42:04,950 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:42:04,950 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:42:04,950 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:04,961 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:42:04,968 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:42:04,968 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:42:04,974 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:42:04,980 [ scc.git] DEBUG Already up to date. 2024-09-22 00:42:04,980 [ scc.git] DEBUG Calling 'git fetch origin pull/390/head' 2024-09-22 00:42:05,314 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-22 00:42:05,315 [ scc.git] DEBUG * branch refs/pull/390/head -> FETCH_HEAD 2024-09-22 00:42:05,323 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:42:05,324 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:42:05,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:05,332 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-22 00:42:05,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:05,348 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 390 (Bump omero-figure from `5f62399` to `f9a321d`) 89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-22 00:42:05,354 [ scc.git] DEBUG Already up to date. 2024-09-22 00:42:05,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:42:05,482 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:42:05,532 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:42:05,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:05,538 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:42:05,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-09-22 00:42:06,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-09-22 00:42:06,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-22 00:42:07,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:42:07,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:42:08,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-22 00:42:08,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:42:08,739 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-09-22 00:42:08,739 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:42:08,739 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-22 00:42:08,739 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:42:08,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:08,745 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:42:08,750 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:42:08,750 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:42:08,756 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:42:08,761 [ scc.git] DEBUG Already up to date. 2024-09-22 00:42:08,762 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-09-22 00:42:09,205 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-09-22 00:42:09,205 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-09-22 00:42:09,210 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:42:09,210 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:42:09,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:09,216 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-22 00:42:09,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:09,226 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-22 00:42:09,237 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:42:09,239 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-09-22 00:42:09,239 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-09-22 00:42:09,239 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-09-22 00:42:09,239 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-09-22 00:42:09,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:42:09,379 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:42:09,422 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:42:09,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:09,427 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:42:09,471 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:42:09,477 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f042261ce50> has no local changes 2024-09-22 00:42:09,478 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:42:09,487 [ scc.git] DEBUG [detached HEAD d50923f] merge master -Dorg -Ssuccess-only 2024-09-22 00:42:09,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:42:09,487 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:42:09,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-09-22 00:42:10,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-09-22 00:42:10,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-09-22 00:42:11,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-22 00:42:11,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:42:12,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:42:12,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-22 00:42:13,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:42:13,234 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-09-22 00:42:13,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-09-22 00:42:14,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-09-22 00:42:14,137 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:42:14,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-22 00:42:14,137 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:42:14,137 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:14,144 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:42:14,150 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:42:14,150 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:42:14,156 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:42:14,162 [ scc.git] DEBUG Already up to date. 2024-09-22 00:42:14,162 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-09-22 00:42:14,507 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-09-22 00:42:14,507 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-09-22 00:42:14,512 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:42:14,512 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:42:14,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:14,517 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-22 00:42:14,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:14,528 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-22 00:42:14,537 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:42:14,539 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-09-22 00:42:14,539 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-09-22 00:42:14,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:42:14,682 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:42:14,720 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:42:14,720 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:14,726 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:42:14,763 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:42:14,769 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f042085be20> has no local changes 2024-09-22 00:42:14,769 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:42:14,778 [ scc.git] DEBUG [detached HEAD 4fefc3c] merge master -Dorg -Ssuccess-only 2024-09-22 00:42:14,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:42:14,778 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:42:15,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-09-22 00:42:15,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-09-22 00:42:16,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-09-22 00:42:16,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-09-22 00:42:17,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-09-22 00:42:17,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-22 00:42:17,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:42:18,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-22 00:42:18,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:42:18,872 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-09-22 00:42:19,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-09-22 00:42:19,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-09-22 00:42:20,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-09-22 00:42:20,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-09-22 00:42:21,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-09-22 00:42:21,152 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:42:21,152 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-22 00:42:21,152 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:42:21,152 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:21,158 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:42:21,163 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:42:21,163 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:42:21,169 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:42:21,174 [ scc.git] DEBUG Already up to date. 2024-09-22 00:42:21,174 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-09-22 00:42:21,699 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-09-22 00:42:21,699 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-09-22 00:42:21,706 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:42:21,706 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:42:21,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:21,712 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-22 00:42:21,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:21,723 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-22 00:42:21,732 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-09-22 00:42:21,733 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:42:21,736 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-09-22 00:42:21,736 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-09-22 00:42:21,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:42:21,877 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:42:21,916 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:42:21,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:21,923 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:42:21,962 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:42:21,969 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f042086dd00> has no local changes 2024-09-22 00:42:21,969 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:42:21,977 [ scc.git] DEBUG [detached HEAD 0878ad2] merge master -Dorg -Ssuccess-only 2024-09-22 00:42:21,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:42:21,978 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:42:22,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-09-22 00:42:22,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-09-22 00:42:23,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-09-22 00:42:23,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-09-22 00:42:24,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-22 00:42:24,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:42:25,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:42:25,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-22 00:42:26,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-09-22 00:42:26,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-22 00:42:27,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-09-22 00:42:27,058 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-09-22 00:42:27,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-09-22 00:42:28,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-09-22 00:42:28,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-09-22 00:42:29,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-22 00:42:29,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:42:29,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-22 00:42:30,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:42:30,393 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-22 00:42:30,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-09-22 00:42:31,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-09-22 00:42:31,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-22 00:42:32,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:42:32,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-22 00:42:33,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:42:33,199 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-09-22 00:42:33,199 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:42:33,199 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-22 00:42:33,200 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:42:33,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:33,205 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:42:33,210 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:42:33,210 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:42:33,215 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:42:33,224 [ scc.git] DEBUG Already up to date. 2024-09-22 00:42:33,225 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-09-22 00:42:33,640 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-22 00:42:33,640 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-09-22 00:42:33,646 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-09-22 00:42:34,000 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-22 00:42:34,001 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-09-22 00:42:34,006 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-09-22 00:42:34,405 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-22 00:42:34,405 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-09-22 00:42:34,410 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:42:34,411 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:42:34,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:34,418 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-22 00:42:34,426 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:34,432 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-22 00:42:34,487 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-22 00:42:34,488 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-22 00:42:34,488 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-22 00:42:34,488 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-22 00:42:34,488 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-22 00:42:34,494 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-22 00:42:34,502 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-22 00:42:34,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:42:34,643 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-22 00:42:34,654 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-22 00:42:34,662 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#191](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-09-22 00:42:34,668 [ scc.config] DEBUG Found github.token 2024-09-22 00:42:34,668 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-09-22 00:42:34,668 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-22 00:42:34,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:34,688 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-22 00:42:34,729 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-09-22 00:42:34,730 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-09-22 00:42:34,730 [ scc.git] DEBUG Auto-merging setup.py 2024-09-22 00:42:34,730 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-22 00:42:34,730 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-22 00:42:34,730 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-22 00:42:34,731 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-22 00:42:34,733 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-09-22 00:42:34,734 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-22 00:42:34,737 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-22 00:42:34,747 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-22 00:42:35,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:42:35,044 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-22 00:42:35,051 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-22 00:42:35,056 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#191](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-09-22 00:42:35,060 [ scc.config] DEBUG Found github.token 2024-09-22 00:42:35,061 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-09-22 00:42:35,061 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-22 00:42:35,066 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:35,071 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-22 00:42:35,083 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-09-22 00:42:35,084 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-22 00:42:35,084 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:42:35,087 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-09-22 00:42:35,087 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-09-22 00:42:35,087 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-09-22 00:42:35,087 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-09-22 00:42:35,088 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-09-22 00:42:35,088 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-09-22 00:42:35,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:42:35,429 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:42:35,469 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:42:35,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:42:35,474 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:42:35,511 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:42:35,517 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0420886ee0> has no local changes 2024-09-22 00:42:35,518 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:42:35,526 [ scc.git] DEBUG [detached HEAD 9138643] merge master -Dorg -Ssuccess-only 2024-09-22 00:42:35,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:42:35,527 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:42:36,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-09-22 00:42:36,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-09-22 00:42:37,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/590 HTTP/1.1" 200 None 2024-09-22 00:42:37,005 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-22 00:42:37,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a7d483b1917b72d90c571703f5d4187bcb7711f9 HTTP/1.1" 200 None 2024-09-22 00:42:38,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a7d483b1917b72d90c571703f5d4187bcb7711f9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:42:38,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a7d483b1917b72d90c571703f5d4187bcb7711f9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:42:38,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a7d483b1917b72d90c571703f5d4187bcb7711f9 HTTP/1.1" 200 None 2024-09-22 00:42:39,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/a7d483b1917b72d90c571703f5d4187bcb7711f9?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:42:39,341 [ scc.repo] DEBUG - PR 590 dependabot[bot] 'Bump vite from 3.2.10 to 3.2.11' 2024-09-22 00:42:39,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/589 HTTP/1.1" 200 None 2024-09-22 00:42:40,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/589/comments HTTP/1.1" 200 None 2024-09-22 00:42:40,264 [ scc.repo] DEBUG # ... Include label: include 2024-09-22 00:42:40,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bafdba12cea778932f288783a45850dd66d047ff HTTP/1.1" 200 None 2024-09-22 00:42:41,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bafdba12cea778932f288783a45850dd66d047ff/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:42:41,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bafdba12cea778932f288783a45850dd66d047ff/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:42:42,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/588 HTTP/1.1" 200 None 2024-09-22 00:42:42,160 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-22 00:42:42,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9c8bd3449455ae780654d47d06384c7ddd8a34cd HTTP/1.1" 200 None 2024-09-22 00:42:43,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9c8bd3449455ae780654d47d06384c7ddd8a34cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:42:43,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9c8bd3449455ae780654d47d06384c7ddd8a34cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:42:44,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/587 HTTP/1.1" 200 None 2024-09-22 00:42:44,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742 HTTP/1.1" 200 None 2024-09-22 00:42:45,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:42:45,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:42:45,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742 HTTP/1.1" 200 None 2024-09-22 00:42:46,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea8f8e2cd52811def9584dc64139b846d5724742?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:42:46,370 [ scc.repo] DEBUG - PR 587 will-moore 'Update licenses.txt' 2024-09-22 00:42:46,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-09-22 00:42:47,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-09-22 00:42:47,321 [ scc.repo] DEBUG # ... Include label: include 2024-09-22 00:42:47,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8 HTTP/1.1" 200 None 2024-09-22 00:42:48,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:42:48,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:42:49,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8 HTTP/1.1" 200 None 2024-09-22 00:42:49,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15d28a393f071234c3a7355829cbc9a4521246f8?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:42:49,801 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-09-22 00:42:50,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583 HTTP/1.1" 200 None 2024-09-22 00:42:50,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583/comments HTTP/1.1" 200 None 2024-09-22 00:42:50,695 [ scc.repo] DEBUG # ... Include label: include 2024-09-22 00:42:51,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4 HTTP/1.1" 200 None 2024-09-22 00:42:51,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:42:52,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:42:52,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4 HTTP/1.1" 200 None 2024-09-22 00:42:53,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/767908ccac79aaeebd261b698f6f56d5bd95beb4?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:42:53,098 [ scc.repo] DEBUG - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-22 00:42:53,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-09-22 00:42:53,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-09-22 00:42:54,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-09-22 00:42:54,542 [ scc.repo] DEBUG # ... Include label: include 2024-09-22 00:42:55,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0 HTTP/1.1" 200 None 2024-09-22 00:42:55,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:42:55,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:42:56,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0 HTTP/1.1" 200 None 2024-09-22 00:42:56,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:42:56,779 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-09-22 00:42:57,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-09-22 00:42:57,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-09-22 00:42:57,804 [ scc.repo] DEBUG # ... Include label: include 2024-09-22 00:42:58,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7 HTTP/1.1" 200 None 2024-09-22 00:42:58,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:42:59,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:42:59,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7 HTTP/1.1" 200 None 2024-09-22 00:43:00,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/05cc29816c5dc4252e0704936ab7463bd719dab7?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:43:00,171 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-09-22 00:43:00,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-09-22 00:43:01,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-09-22 00:43:01,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-22 00:43:02,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:43:02,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:43:03,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-22 00:43:03,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:43:03,496 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-22 00:43:03,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-09-22 00:43:04,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-09-22 00:43:04,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d HTTP/1.1" 200 None 2024-09-22 00:43:05,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:43:05,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:43:06,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d HTTP/1.1" 200 None 2024-09-22 00:43:06,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41b3686e00f764da75b8ad9697f20488a5163b9d?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:43:06,834 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-09-22 00:43:06,834 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:43:06,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-22 00:43:06,835 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:43:06,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:06,841 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:43:06,847 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:43:06,847 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:43:06,854 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:43:06,860 [ scc.git] DEBUG Already up to date. 2024-09-22 00:43:06,860 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-09-22 00:43:07,360 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-22 00:43:07,360 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-09-22 00:43:07,367 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-09-22 00:43:07,682 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-22 00:43:07,682 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-09-22 00:43:07,689 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-09-22 00:43:08,111 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-22 00:43:08,111 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-09-22 00:43:08,137 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-09-22 00:43:08,458 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-22 00:43:08,459 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-09-22 00:43:08,464 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head' 2024-09-22 00:43:09,242 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-22 00:43:09,243 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD 2024-09-22 00:43:09,248 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-09-22 00:43:09,541 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-22 00:43:09,541 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-09-22 00:43:09,547 [ scc.git] DEBUG Calling 'git fetch origin pull/587/head' 2024-09-22 00:43:09,866 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-22 00:43:09,866 [ scc.git] DEBUG * branch refs/pull/587/head -> FETCH_HEAD 2024-09-22 00:43:09,872 [ scc.git] DEBUG Calling 'git fetch origin pull/590/head' 2024-09-22 00:43:10,172 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-22 00:43:10,172 [ scc.git] DEBUG * branch refs/pull/590/head -> FETCH_HEAD 2024-09-22 00:43:10,179 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:43:10,179 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:43:10,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:10,188 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41b3686e00f764da75b8ad9697f20488a5163b9d' 2024-09-22 00:43:10,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:10,207 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 41b3686e00f764da75b8ad9697f20488a5163b9d' 2024-09-22 00:43:10,338 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-22 00:43:10,339 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-22 00:43:10,339 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-22 00:43:10,339 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-09-22 00:43:10,339 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-22 00:43:10,340 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:10,369 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-09-22 00:43:10,369 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-09-22 00:43:10,370 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-09-22 00:43:10,370 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-09-22 00:43:10,370 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-09-22 00:43:10,370 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 4 +- 2024-09-22 00:43:10,370 [ scc.git] DEBUG src/js/shape_editor/point.js | 477 +++++++++++++++++++++ 2024-09-22 00:43:10,370 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 11 +- 2024-09-22 00:43:10,370 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-09-22 00:43:10,370 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-09-22 00:43:10,370 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-09-22 00:43:10,370 [ scc.git] DEBUG 11 files changed, 510 insertions(+), 9 deletions(-) 2024-09-22 00:43:10,370 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-09-22 00:43:10,370 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/point.js 2024-09-22 00:43:10,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:10,501 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-22 00:43:10,520 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:10,531 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-22 00:43:10,570 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:10,575 [ scc.git] DEBUG setup.py | 2 +- 2024-09-22 00:43:10,576 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-22 00:43:11,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:11,008 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-22 00:43:11,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:11,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-22 00:43:11,283 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-22 00:43:11,284 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-22 00:43:11,284 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-22 00:43:11,284 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2024-09-22 00:43:11,284 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-22 00:43:11,284 [ scc.git] DEBUG Auto-merging src/templates/shapes/shape_toolbar.template.html 2024-09-22 00:43:11,284 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-22 00:43:11,284 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-22 00:43:11,295 [ scc.git] DEBUG Calling 'git reset --hard 47a90b94e06ad2fb653a82b17e1b73b5ae88bdab' 2024-09-22 00:43:11,308 [ scc.git] DEBUG HEAD is now at 47a90b94 merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 2024-09-22 00:43:11,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:11,445 [ scc.git] DEBUG Calling 'git merge-base f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-22 00:43:11,453 [ scc.git] DEBUG Calling 'git diff --name-only f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53..f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53' 2024-09-22 00:43:11,460 [ scc.git] INFO - PR 577 Rdornier 'Fill rois' Conflicting PR. Removed from build [OMERO-plugins-push#191](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/consoleText) for more details. Possible conflicts: - PR #555 will-moore 'Points in shape editor' - omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py --conflicts 2024-09-22 00:43:11,470 [ scc.config] DEBUG Found github.token 2024-09-22 00:43:11,471 [ scc.git] DEBUG Adding comment to issue #577. 2024-09-22 00:43:12,181 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 201 2024 2024-09-22 00:43:12,182 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...243ea0cf6ee3b040b93543ddddf0458dd05d8cf0' 2024-09-22 00:43:12,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:12,198 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) 243ea0cf6ee3b040b93543ddddf0458dd05d8cf0' 2024-09-22 00:43:12,355 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-22 00:43:12,356 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-22 00:43:12,356 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-22 00:43:12,356 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:12,364 [ scc.git] DEBUG .gitignore | 2 + 2024-09-22 00:43:12,364 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-09-22 00:43:12,364 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-09-22 00:43:12,364 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-09-22 00:43:12,364 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-09-22 00:43:12,364 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-09-22 00:43:12,364 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 1 - 2024-09-22 00:43:12,364 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-09-22 00:43:12,364 [ scc.git] DEBUG 8 files changed, 363 insertions(+), 80 deletions(-) 2024-09-22 00:43:12,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:12,562 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...767908ccac79aaeebd261b698f6f56d5bd95beb4' 2024-09-22 00:43:12,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:12,605 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Add Hilo Checkbox for LUT Toggling in Channel Slider View) 767908ccac79aaeebd261b698f6f56d5bd95beb4' 2024-09-22 00:43:12,782 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-22 00:43:12,784 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:12,791 [ scc.git] DEBUG src/js/models/panel_model.js | 25 ++++++++++++++--- 2024-09-22 00:43:12,791 [ scc.git] DEBUG src/js/models/undo.js | 3 +- 2024-09-22 00:43:12,791 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 53 ++++++++++++++++++++++++++++++++++-- 2024-09-22 00:43:12,791 [ scc.git] DEBUG src/templates/checkbox_template.html | 4 +++ 2024-09-22 00:43:12,791 [ scc.git] DEBUG 4 files changed, 77 insertions(+), 8 deletions(-) 2024-09-22 00:43:12,791 [ scc.git] DEBUG create mode 100644 src/templates/checkbox_template.html 2024-09-22 00:43:12,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:12,946 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15d28a393f071234c3a7355829cbc9a4521246f8' 2024-09-22 00:43:12,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:12,978 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) 15d28a393f071234c3a7355829cbc9a4521246f8' 2024-09-22 00:43:13,010 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:13,018 [ scc.git] DEBUG omero_figure/views.py | 130 ++++++++++++++++++++++++++++++++++++------ 2024-09-22 00:43:13,018 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-09-22 00:43:13,019 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-09-22 00:43:13,019 [ scc.git] DEBUG 3 files changed, 124 insertions(+), 26 deletions(-) 2024-09-22 00:43:13,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:13,333 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea8f8e2cd52811def9584dc64139b846d5724742' 2024-09-22 00:43:13,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:13,358 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 587 (Update licenses.txt) ea8f8e2cd52811def9584dc64139b846d5724742' 2024-09-22 00:43:13,391 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:13,396 [ scc.git] DEBUG licenses.txt | 30 +++++++++++++++++++----------- 2024-09-22 00:43:13,397 [ scc.git] DEBUG 1 file changed, 19 insertions(+), 11 deletions(-) 2024-09-22 00:43:13,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:13,726 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d483b1917b72d90c571703f5d4187bcb7711f9' 2024-09-22 00:43:13,771 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:13,791 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 590 (Bump vite from 3.2.10 to 3.2.11) a7d483b1917b72d90c571703f5d4187bcb7711f9' 2024-09-22 00:43:13,854 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:13,863 [ scc.git] DEBUG package-lock.json | 14 ++++++++++---- 2024-09-22 00:43:13,863 [ scc.git] DEBUG package.json | 2 +- 2024-09-22 00:43:13,863 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 5 deletions(-) 2024-09-22 00:43:14,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:14,112 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:43:14,173 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:43:14,174 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:14,182 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:43:14,243 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:43:14,260 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f042082c7c0> has no local changes 2024-09-22 00:43:14,262 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' (status: action_required) - PR 588 dependabot[bot] 'Bump dompurify from 2.4.3 to 2.5.4' (status: failure) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' - PR 587 will-moore 'Update licenses.txt' - PR 590 dependabot[bot] 'Bump vite from 3.2.10 to 3.2.11' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:43:14,285 [ scc.git] DEBUG [detached HEAD 56c41992] merge master -Dorg -Ssuccess-only 2024-09-22 00:43:14,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:43:14,287 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:43:14,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-09-22 00:43:15,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-09-22 00:43:15,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-09-22 00:43:16,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-22 00:43:16,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:43:17,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-22 00:43:17,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:43:17,484 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-09-22 00:43:17,484 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:43:17,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-22 00:43:17,484 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:43:17,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:17,492 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:43:17,498 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:43:17,498 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:43:17,508 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:43:17,521 [ scc.git] DEBUG Already up to date. 2024-09-22 00:43:17,522 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-09-22 00:43:17,897 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-09-22 00:43:17,897 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-09-22 00:43:17,906 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:43:17,906 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:43:17,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:17,917 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-22 00:43:17,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:17,937 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-22 00:43:17,984 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-09-22 00:43:17,985 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:17,989 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-09-22 00:43:17,989 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-09-22 00:43:18,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:18,144 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:43:18,218 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:43:18,219 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:18,238 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:43:18,305 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:43:18,318 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0423cd17f0> has no local changes 2024-09-22 00:43:18,319 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:43:18,337 [ scc.git] DEBUG [detached HEAD f704ac8] merge master -Dorg -Ssuccess-only 2024-09-22 00:43:18,338 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:43:18,338 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:43:18,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-09-22 00:43:19,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-09-22 00:43:19,103 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-22 00:43:19,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-22 00:43:20,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:43:20,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:43:21,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-22 00:43:21,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:43:21,543 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-22 00:43:21,543 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:43:21,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-22 00:43:21,543 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:43:21,543 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:21,549 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:43:21,556 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:43:21,557 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:43:21,563 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:43:21,570 [ scc.git] DEBUG Already up to date. 2024-09-22 00:43:21,570 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-09-22 00:43:21,886 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-09-22 00:43:21,887 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-09-22 00:43:21,891 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:43:21,891 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:43:21,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:21,898 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-22 00:43:21,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:21,910 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-22 00:43:21,921 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:21,926 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-09-22 00:43:21,926 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-09-22 00:43:22,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:22,066 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:43:22,113 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:43:22,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:22,120 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:43:22,165 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:43:22,174 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0420832d60> has no local changes 2024-09-22 00:43:22,174 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:43:22,184 [ scc.git] DEBUG [detached HEAD 76df1f8] merge master -Dorg -Ssuccess-only 2024-09-22 00:43:22,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:43:22,185 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:43:22,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-09-22 00:43:23,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-09-22 00:43:23,101 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-22 00:43:23,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-22 00:43:24,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:43:24,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:43:25,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-22 00:43:25,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:43:25,566 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-22 00:43:26,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-09-22 00:43:26,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-09-22 00:43:26,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-22 00:43:27,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:43:27,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:43:28,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-22 00:43:28,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:43:28,806 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-22 00:43:29,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-09-22 00:43:29,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-09-22 00:43:29,691 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-22 00:43:30,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-22 00:43:30,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:43:31,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:43:31,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-22 00:43:32,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:43:32,393 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-22 00:43:32,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-09-22 00:43:32,860 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-22 00:43:33,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-22 00:43:33,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:43:34,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:43:34,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-22 00:43:35,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:43:35,293 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-22 00:43:35,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-09-22 00:43:36,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-09-22 00:43:36,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-22 00:43:37,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:43:37,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:43:38,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-22 00:43:38,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:43:38,419 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-22 00:43:38,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-09-22 00:43:39,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-09-22 00:43:39,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-22 00:43:40,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:43:40,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:43:41,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-22 00:43:41,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:43:41,628 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-09-22 00:43:42,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-09-22 00:43:42,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-09-22 00:43:43,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-22 00:43:43,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:43:43,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-22 00:43:44,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:43:44,279 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-09-22 00:43:44,279 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:43:44,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-22 00:43:44,280 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:43:44,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:44,289 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:43:44,298 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:43:44,299 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:43:44,316 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:43:44,325 [ scc.git] DEBUG Already up to date. 2024-09-22 00:43:44,325 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-09-22 00:43:44,749 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-22 00:43:44,749 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-09-22 00:43:44,754 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-09-22 00:43:45,440 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-22 00:43:45,440 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-09-22 00:43:45,446 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-09-22 00:43:45,757 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-22 00:43:45,758 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-09-22 00:43:45,763 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-09-22 00:43:46,067 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-22 00:43:46,067 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-09-22 00:43:46,072 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-09-22 00:43:46,358 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-22 00:43:46,358 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-09-22 00:43:46,363 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-09-22 00:43:46,721 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-22 00:43:46,722 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-09-22 00:43:46,726 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-09-22 00:43:47,022 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-22 00:43:47,022 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-09-22 00:43:47,027 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:43:47,027 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:43:47,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:47,035 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-22 00:43:47,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:47,050 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-22 00:43:47,076 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-22 00:43:47,077 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:47,081 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-09-22 00:43:47,081 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-09-22 00:43:47,081 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-09-22 00:43:47,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:47,218 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-22 00:43:47,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:47,235 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-22 00:43:47,306 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-09-22 00:43:47,306 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-22 00:43:47,306 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-22 00:43:47,306 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-09-22 00:43:47,307 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:47,311 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-09-22 00:43:47,311 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-09-22 00:43:47,311 [ scc.git] DEBUG src/app/header.html | 5 + 2024-09-22 00:43:47,311 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-09-22 00:43:47,311 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-09-22 00:43:47,311 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-09-22 00:43:47,311 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-09-22 00:43:47,311 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-09-22 00:43:47,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:47,612 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-22 00:43:47,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:47,626 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-22 00:43:47,682 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-09-22 00:43:47,682 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:47,686 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-09-22 00:43:47,687 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-09-22 00:43:47,687 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-09-22 00:43:48,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:48,680 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-22 00:43:48,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:48,715 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-22 00:43:48,733 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:48,745 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-09-22 00:43:48,745 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-09-22 00:43:49,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:49,062 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-22 00:43:49,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:49,076 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-22 00:43:49,122 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-22 00:43:49,123 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:49,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:49,466 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-22 00:43:49,474 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:49,481 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-22 00:43:49,532 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-22 00:43:49,533 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-22 00:43:49,533 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-22 00:43:49,533 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:49,538 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-09-22 00:43:49,538 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-09-22 00:43:49,538 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-09-22 00:43:49,538 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-09-22 00:43:49,538 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-09-22 00:43:49,538 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-09-22 00:43:49,538 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-09-22 00:43:49,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:49,851 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-22 00:43:49,859 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:49,865 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-22 00:43:49,900 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-22 00:43:49,901 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:49,911 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-09-22 00:43:49,911 [ scc.git] DEBUG package.json | 2 +- 2024-09-22 00:43:49,911 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-09-22 00:43:50,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:50,230 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:43:50,274 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:43:50,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:50,280 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:43:50,319 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:43:50,330 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f041077a340> has no local changes 2024-09-22 00:43:50,331 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:43:50,344 [ scc.git] DEBUG [detached HEAD 413e879] merge master -Dorg -Ssuccess-only 2024-09-22 00:43:50,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:43:50,346 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:43:50,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-09-22 00:43:51,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-09-22 00:43:51,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-09-22 00:43:52,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-22 00:43:52,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:43:53,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:43:53,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-22 00:43:53,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:43:53,944 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-09-22 00:43:53,944 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:43:53,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-22 00:43:53,945 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:43:53,945 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:53,951 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:43:53,958 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:43:53,959 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:43:53,966 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:43:53,973 [ scc.git] DEBUG Already up to date. 2024-09-22 00:43:53,974 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-09-22 00:43:54,294 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-09-22 00:43:54,294 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-09-22 00:43:54,301 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:43:54,302 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:43:54,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:54,310 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-22 00:43:54,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:54,329 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-22 00:43:54,344 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:43:54,347 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-09-22 00:43:54,348 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-09-22 00:43:54,348 [ scc.git] DEBUG requirements.txt | 2 +- 2024-09-22 00:43:54,348 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-09-22 00:43:54,348 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-09-22 00:43:54,348 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-09-22 00:43:54,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:43:54,482 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:43:54,526 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:43:54,526 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:43:54,533 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:43:54,586 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:43:54,594 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f041077a2e0> has no local changes 2024-09-22 00:43:54,595 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:43:54,605 [ scc.git] DEBUG [detached HEAD 70d10b7] merge master -Dorg -Ssuccess-only 2024-09-22 00:43:54,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:43:54,606 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:43:55,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-09-22 00:43:55,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-09-22 00:43:55,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-09-22 00:43:56,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-22 00:43:56,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:43:57,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-22 00:43:57,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:43:57,756 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-09-22 00:43:58,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-09-22 00:43:58,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-09-22 00:43:59,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-22 00:43:59,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:44:00,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-22 00:44:00,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:44:00,615 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-22 00:44:01,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-09-22 00:44:01,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-09-22 00:44:02,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-22 00:44:02,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:44:03,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-22 00:44:03,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:44:03,396 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-22 00:44:03,396 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:44:03,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-22 00:44:03,396 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:03,397 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:03,406 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:44:03,417 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:44:03,418 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:44:03,429 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:44:03,441 [ scc.git] DEBUG Already up to date. 2024-09-22 00:44:03,441 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-09-22 00:44:03,943 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-22 00:44:03,943 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-09-22 00:44:03,948 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-09-22 00:44:04,599 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-22 00:44:04,599 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-09-22 00:44:04,604 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-09-22 00:44:04,886 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-22 00:44:04,887 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-09-22 00:44:04,891 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:44:04,891 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:04,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:04,897 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-22 00:44:04,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:04,910 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-22 00:44:05,104 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-09-22 00:44:05,104 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-09-22 00:44:05,104 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-22 00:44:05,104 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-22 00:44:05,105 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-22 00:44:05,105 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-22 00:44:05,111 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-22 00:44:05,120 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-22 00:44:05,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:05,252 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-22 00:44:05,260 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-22 00:44:05,267 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#191](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-09-22 00:44:05,273 [ scc.config] DEBUG Found github.token 2024-09-22 00:44:05,274 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-09-22 00:44:05,274 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-22 00:44:05,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:05,288 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-22 00:44:05,337 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-22 00:44:05,338 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-22 00:44:05,338 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-09-22 00:44:05,339 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-22 00:44:05,341 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-22 00:44:05,359 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-22 00:44:05,376 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-22 00:44:05,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:05,642 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-22 00:44:05,651 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-22 00:44:05,657 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#191](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-09-22 00:44:05,663 [ scc.config] DEBUG Found github.token 2024-09-22 00:44:05,663 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-09-22 00:44:05,663 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-22 00:44:05,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:05,673 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-22 00:44:05,685 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:44:05,688 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-09-22 00:44:05,688 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-09-22 00:44:06,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:06,029 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:44:06,082 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:06,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:06,091 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:44:06,150 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:44:06,177 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f04137dff70> has no local changes 2024-09-22 00:44:06,178 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:44:06,199 [ scc.git] DEBUG [detached HEAD 50e5729] merge master -Dorg -Ssuccess-only 2024-09-22 00:44:06,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:44:06,200 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:44:06,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-09-22 00:44:07,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-09-22 00:44:07,058 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-22 00:44:07,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-22 00:44:08,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:44:08,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:44:08,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-22 00:44:09,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:44:09,404 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-22 00:44:09,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-09-22 00:44:09,866 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-22 00:44:10,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-22 00:44:10,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:44:11,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:44:11,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-22 00:44:12,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:44:12,324 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-22 00:44:12,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-09-22 00:44:12,764 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-22 00:44:13,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-22 00:44:13,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:44:14,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:44:14,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-22 00:44:15,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:44:15,112 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-22 00:44:15,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-09-22 00:44:16,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-09-22 00:44:16,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-09-22 00:44:16,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-09-22 00:44:17,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-09-22 00:44:17,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-09-22 00:44:17,903 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:44:17,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-22 00:44:17,904 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:17,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:17,911 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:44:17,916 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:44:17,917 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:44:17,922 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:44:17,928 [ scc.git] DEBUG Already up to date. 2024-09-22 00:44:17,929 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-09-22 00:44:18,253 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-22 00:44:18,254 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-09-22 00:44:18,259 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-09-22 00:44:18,566 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-22 00:44:18,566 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-09-22 00:44:18,571 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-09-22 00:44:18,865 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-22 00:44:18,865 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-09-22 00:44:18,870 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:44:18,870 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:18,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:18,876 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-22 00:44:18,884 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:18,891 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-22 00:44:18,903 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:44:18,906 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-09-22 00:44:18,906 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-09-22 00:44:19,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:19,053 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-22 00:44:19,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:19,064 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-22 00:44:19,087 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-22 00:44:19,087 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:44:19,090 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-09-22 00:44:19,091 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-09-22 00:44:19,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:19,437 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-22 00:44:19,444 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:19,449 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-22 00:44:19,460 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-22 00:44:19,461 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:44:19,464 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-09-22 00:44:19,464 [ scc.git] DEBUG package.json | 2 +- 2024-09-22 00:44:19,464 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-09-22 00:44:19,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:19,812 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:44:19,855 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:19,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:19,861 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:44:19,902 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:44:19,909 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f042083ac40> has no local changes 2024-09-22 00:44:19,910 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:44:19,919 [ scc.git] DEBUG [detached HEAD 9ebfd5d] merge master -Dorg -Ssuccess-only 2024-09-22 00:44:19,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:44:19,920 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:44:20,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-09-22 00:44:20,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-09-22 00:44:21,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-22 00:44:21,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:44:22,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-22 00:44:22,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:44:22,497 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-09-22 00:44:22,498 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:44:22,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-22 00:44:22,498 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:22,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:22,504 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:44:22,511 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:44:22,511 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:44:22,518 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:44:22,525 [ scc.git] DEBUG Already up to date. 2024-09-22 00:44:22,526 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-22 00:44:22,820 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-09-22 00:44:22,820 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-22 00:44:22,825 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:44:22,825 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:22,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:22,832 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-22 00:44:22,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:22,847 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-22 00:44:22,859 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:44:22,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:22,995 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:44:23,034 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:23,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:23,040 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:44:23,079 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:44:23,086 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f04107b3b80> has no local changes 2024-09-22 00:44:23,086 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:44:23,095 [ scc.git] DEBUG [detached HEAD 7b48607] merge master -Dorg -Ssuccess-only 2024-09-22 00:44:23,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:44:23,096 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:44:23,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-09-22 00:44:23,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-09-22 00:44:24,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-09-22 00:44:24,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-09-22 00:44:25,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-22 00:44:25,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:44:26,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-22 00:44:26,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:44:26,658 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-22 00:44:26,658 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:44:26,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-22 00:44:26,658 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:26,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:26,665 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:44:26,670 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:44:26,671 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:44:26,677 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:44:26,683 [ scc.git] DEBUG Already up to date. 2024-09-22 00:44:26,684 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-09-22 00:44:27,216 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-09-22 00:44:27,217 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-09-22 00:44:27,224 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:44:27,224 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:27,224 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:27,230 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-22 00:44:27,237 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:27,243 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-22 00:44:27,253 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-09-22 00:44:27,254 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:44:27,256 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-09-22 00:44:27,256 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-09-22 00:44:27,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:27,424 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:44:27,464 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:27,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:27,470 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:44:27,508 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:44:27,515 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f04137ccf10> has no local changes 2024-09-22 00:44:27,516 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:44:27,525 [ scc.git] DEBUG [detached HEAD f4676fd] merge master -Dorg -Ssuccess-only 2024-09-22 00:44:27,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:44:27,526 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:44:27,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-09-22 00:44:28,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-09-22 00:44:28,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-09-22 00:44:29,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-22 00:44:29,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:44:30,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-22 00:44:30,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:44:30,638 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-22 00:44:30,638 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:44:30,638 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-22 00:44:30,638 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:30,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:30,645 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:44:30,650 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:44:30,651 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:44:30,657 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:44:30,663 [ scc.git] DEBUG Already up to date. 2024-09-22 00:44:30,663 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-22 00:44:31,017 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-09-22 00:44:31,017 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-22 00:44:31,022 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:44:31,022 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:31,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:31,028 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-22 00:44:31,035 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:31,040 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-22 00:44:31,082 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-09-22 00:44:31,083 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-09-22 00:44:31,083 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-09-22 00:44:31,083 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-09-22 00:44:31,083 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-09-22 00:44:31,083 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-09-22 00:44:31,083 [ scc.git] DEBUG Auto-merging setup.py 2024-09-22 00:44:31,083 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-09-22 00:44:31,083 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-22 00:44:31,083 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-22 00:44:31,090 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-22 00:44:31,098 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-22 00:44:31,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:31,243 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-22 00:44:31,251 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-22 00:44:31,258 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#191](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - setup.py - omero_signup/signup_settings.py - omero_signup/views.py --conflicts 2024-09-22 00:44:31,264 [ scc.config] DEBUG Found github.token 2024-09-22 00:44:31,264 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-09-22 00:44:31,265 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:44:31,303 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:31,304 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:31,310 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:44:31,351 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:44:31,359 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f041079fe50> has no local changes 2024-09-22 00:44:31,359 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:44:31,369 [ scc.git] DEBUG [detached HEAD ec005db] merge master -Dorg -Ssuccess-only 2024-09-22 00:44:31,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:44:31,369 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:44:31,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-09-22 00:44:32,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-09-22 00:44:32,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-09-22 00:44:33,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-22 00:44:33,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:44:33,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-22 00:44:34,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:44:34,379 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-22 00:44:34,379 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:44:34,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-22 00:44:34,379 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:34,379 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:34,385 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:44:34,391 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:44:34,391 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:44:34,398 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:44:34,404 [ scc.git] DEBUG Already up to date. 2024-09-22 00:44:34,405 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-09-22 00:44:34,964 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-09-22 00:44:34,964 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-09-22 00:44:34,968 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:44:34,969 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:34,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:34,974 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-09-22 00:44:34,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:34,987 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-09-22 00:44:34,999 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:44:35,002 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-09-22 00:44:35,002 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-09-22 00:44:35,002 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-09-22 00:44:35,002 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-09-22 00:44:35,002 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-09-22 00:44:35,002 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-09-22 00:44:35,003 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-09-22 00:44:35,003 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-09-22 00:44:35,003 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-09-22 00:44:35,004 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-09-22 00:44:35,005 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-09-22 00:44:35,005 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-09-22 00:44:35,005 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-09-22 00:44:35,005 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-09-22 00:44:35,005 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-09-22 00:44:35,005 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-09-22 00:44:35,005 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-09-22 00:44:35,005 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-09-22 00:44:35,005 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-09-22 00:44:35,005 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-09-22 00:44:35,005 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-09-22 00:44:35,005 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-09-22 00:44:35,005 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-09-22 00:44:35,005 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-09-22 00:44:35,005 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-09-22 00:44:35,005 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-09-22 00:44:35,005 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-09-22 00:44:35,005 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-09-22 00:44:35,005 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-09-22 00:44:35,005 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-09-22 00:44:35,005 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-09-22 00:44:35,005 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-09-22 00:44:35,005 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-09-22 00:44:35,005 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-09-22 00:44:35,006 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-09-22 00:44:35,006 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-09-22 00:44:35,006 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-09-22 00:44:35,006 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-09-22 00:44:35,006 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-09-22 00:44:35,006 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-09-22 00:44:35,006 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-09-22 00:44:35,006 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-09-22 00:44:35,006 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-09-22 00:44:35,006 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-09-22 00:44:35,006 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-09-22 00:44:35,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:35,130 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:44:35,169 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:35,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:35,175 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:44:35,214 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:44:35,221 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f041076bfd0> has no local changes 2024-09-22 00:44:35,221 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:44:35,230 [ scc.git] DEBUG [detached HEAD 6a9678d] merge master -Dorg -Ssuccess-only 2024-09-22 00:44:35,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:44:35,231 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:44:35,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-09-22 00:44:35,545 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:44:35,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-22 00:44:35,546 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:35,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:35,551 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:44:35,557 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:44:35,558 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:44:35,565 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:44:35,571 [ scc.git] DEBUG Already up to date. 2024-09-22 00:44:35,571 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:44:35,571 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:35,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:35,577 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:44:35,615 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:35,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:35,627 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:44:35,666 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:44:35,672 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f04107729a0> has no local changes 2024-09-22 00:44:35,673 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:44:35,683 [ scc.git] DEBUG [detached HEAD c320994] merge master -Dorg -Ssuccess-only 2024-09-22 00:44:35,684 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:44:35,684 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:44:35,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-09-22 00:44:35,961 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:44:35,962 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-22 00:44:35,962 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:35,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:35,970 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:44:35,978 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:44:35,978 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:44:35,987 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:44:35,996 [ scc.git] DEBUG Already up to date. 2024-09-22 00:44:35,996 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:44:35,997 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:35,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:36,007 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:44:36,063 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:36,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:36,073 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:44:36,127 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:44:36,137 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f041073ad90> has no local changes 2024-09-22 00:44:36,138 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:44:36,151 [ scc.git] DEBUG [detached HEAD f1cb24e] merge master -Dorg -Ssuccess-only 2024-09-22 00:44:36,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:44:36,152 [ scc.git] INFO Overriding base-branch from master to main 2024-09-22 00:44:36,152 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:44:36,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-09-22 00:44:36,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-09-22 00:44:37,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-09-22 00:44:37,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-09-22 00:44:38,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-22 00:44:38,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:44:39,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-22 00:44:39,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:44:39,679 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-22 00:44:39,679 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:44:39,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-22 00:44:39,679 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:39,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:39,685 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-09-22 00:44:39,691 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:44:39,691 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-09-22 00:44:39,697 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-09-22 00:44:39,703 [ scc.git] DEBUG Already up to date. 2024-09-22 00:44:39,703 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-09-22 00:44:40,027 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-09-22 00:44:40,027 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-09-22 00:44:40,032 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:44:40,032 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:40,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:40,039 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-22 00:44:40,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:40,054 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-22 00:44:40,102 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-09-22 00:44:40,102 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-09-22 00:44:40,102 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-22 00:44:40,102 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-22 00:44:40,109 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-22 00:44:40,116 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-22 00:44:40,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:40,328 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-22 00:44:40,334 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-22 00:44:40,340 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#191](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-09-22 00:44:40,345 [ scc.config] DEBUG Found github.token 2024-09-22 00:44:40,346 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-09-22 00:44:40,346 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:44:40,387 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:40,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:40,393 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:44:40,438 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:44:40,445 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f04106c01c0> has no local changes 2024-09-22 00:44:40,445 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:44:40,456 [ scc.git] DEBUG [detached HEAD 9a65d3c] merge master -Dorg -Ssuccess-only 2024-09-22 00:44:40,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:44:40,456 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:44:40,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-09-22 00:44:40,739 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:44:40,739 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-22 00:44:40,739 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:40,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:40,746 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:44:40,754 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:44:40,754 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:44:40,763 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:44:40,771 [ scc.git] DEBUG Already up to date. 2024-09-22 00:44:40,772 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:44:40,772 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:40,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:40,780 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:44:40,821 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:40,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:40,827 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:44:40,867 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:44:40,875 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f041073deb0> has no local changes 2024-09-22 00:44:40,875 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:44:40,884 [ scc.git] DEBUG [detached HEAD f5ba55e] merge master -Dorg -Ssuccess-only 2024-09-22 00:44:40,885 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:44:40,885 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:44:41,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-09-22 00:44:41,166 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:44:41,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-22 00:44:41,166 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:41,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:41,172 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:44:41,177 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:44:41,177 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:44:41,183 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:44:41,188 [ scc.git] DEBUG Already up to date. 2024-09-22 00:44:41,189 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:44:41,189 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:41,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:41,194 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:44:41,236 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:41,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:41,242 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:44:41,280 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:44:41,287 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0410730340> has no local changes 2024-09-22 00:44:41,287 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:44:41,296 [ scc.git] DEBUG [detached HEAD 46947e4] merge master -Dorg -Ssuccess-only 2024-09-22 00:44:41,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:44:41,296 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:44:41,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-09-22 00:44:42,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-09-22 00:44:42,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-09-22 00:44:43,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-22 00:44:43,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:44:44,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-22 00:44:44,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:44:44,442 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-09-22 00:44:44,442 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:44:44,442 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-22 00:44:44,442 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:44,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:44,448 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-22 00:44:44,453 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:44:44,453 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-22 00:44:44,459 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-22 00:44:44,464 [ scc.git] DEBUG Already up to date. 2024-09-22 00:44:44,464 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-09-22 00:44:44,780 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-09-22 00:44:44,780 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-09-22 00:44:44,786 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:44:44,786 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:44,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:44,792 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-22 00:44:44,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:44,804 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-22 00:44:44,904 [ scc.git] DEBUG Auto-merging Dockerfile 2024-09-22 00:44:44,904 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-09-22 00:44:44,904 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-22 00:44:44,905 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-22 00:44:44,913 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-22 00:44:44,925 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-22 00:44:45,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:45,062 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-22 00:44:45,069 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-22 00:44:45,075 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#191](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-09-22 00:44:45,081 [ scc.config] DEBUG Found github.token 2024-09-22 00:44:45,081 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-09-22 00:44:45,081 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:44:45,122 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:45,122 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:45,128 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:44:45,168 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:44:45,175 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f041072ea90> has no local changes 2024-09-22 00:44:45,175 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:44:45,184 [ scc.git] DEBUG [detached HEAD 1548543] merge master -Dorg -Ssuccess-only 2024-09-22 00:44:45,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:44:45,185 [ scc.git] INFO Overriding base-branch from master to develop 2024-09-22 00:44:45,185 [ scc.repo] DEBUG ## PRs found: 2024-09-22 00:44:45,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-09-22 00:44:46,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-09-22 00:44:46,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-09-22 00:44:46,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:44:47,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-22 00:44:47,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-09-22 00:44:48,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:44:48,185 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-09-22 00:44:48,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-09-22 00:44:49,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-09-22 00:44:49,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-09-22 00:44:50,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-09-22 00:44:50,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-09-22 00:44:51,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-09-22 00:44:51,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-22 00:44:51,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-22 00:44:52,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-22 00:44:52,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-09-22 00:44:52,779 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-22 00:44:53,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-09-22 00:44:53,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-09-22 00:44:54,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-09-22 00:44:54,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-09-22 00:44:54,670 [ scc.repo] DEBUG ## Branches found: 2024-09-22 00:44:54,670 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-22 00:44:54,670 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:54,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:54,676 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-09-22 00:44:54,681 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-22 00:44:54,681 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-09-22 00:44:54,687 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-09-22 00:44:54,693 [ scc.git] DEBUG Already up to date. 2024-09-22 00:44:54,693 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-09-22 00:44:55,135 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-09-22 00:44:55,135 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-09-22 00:44:55,140 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-09-22 00:44:55,499 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-09-22 00:44:55,500 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-09-22 00:44:55,508 [ scc.git] DEBUG ## Unique users: [] 2024-09-22 00:44:55,508 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:55,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:55,518 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-22 00:44:55,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:55,530 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-22 00:44:55,595 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-09-22 00:44:55,596 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-09-22 00:44:55,596 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-22 00:44:55,596 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-22 00:44:55,603 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-22 00:44:55,611 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-22 00:44:55,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:55,754 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-22 00:44:55,763 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-22 00:44:55,773 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#191](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-09-22 00:44:55,779 [ scc.config] DEBUG Found github.token 2024-09-22 00:44:55,779 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-09-22 00:44:55,779 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-09-22 00:44:55,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:55,790 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-09-22 00:44:55,799 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-22 00:44:55,802 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-09-22 00:44:55,802 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-09-22 00:44:56,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:56,141 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-22 00:44:56,180 [ scc.git] DEBUG Get sha1 of %s 2024-09-22 00:44:56,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-22 00:44:56,186 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:44:56,224 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:44:56,233 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f04106f8640> has no local changes 2024-09-22 00:44:56,234 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:44:56,244 [ scc.git] DEBUG [detached HEAD ceb9c64] merge master -Dorg -Ssuccess-only 2024-09-22 00:44:56,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:44:56,244 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-22 00:44:56,326 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-09-22 00:44:56,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:56,535 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-09-22 00:44:56,540 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-09-22 00:44:56,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:56,922 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-09-22 00:44:56,928 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-09-22 00:44:57,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:57,323 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-09-22 00:44:57,328 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-09-22 00:44:57,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:57,749 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-09-22 00:44:58,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:58,130 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-09-22 00:44:58,135 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-09-22 00:44:58,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:58,514 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-09-22 00:44:58,519 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-09-22 00:44:58,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:58,933 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-09-22 00:44:58,938 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-09-22 00:44:59,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:59,317 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-09-22 00:44:59,323 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-09-22 00:44:59,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:44:59,698 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-09-22 00:44:59,705 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-09-22 00:45:00,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:45:00,093 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-09-22 00:45:00,101 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-09-22 00:45:00,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:45:00,485 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-09-22 00:45:00,509 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-09-22 00:45:00,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:45:00,870 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-09-22 00:45:00,877 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-09-22 00:45:01,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:45:01,306 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-09-22 00:45:01,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:45:01,700 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-09-22 00:45:02,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:45:02,084 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-09-22 00:45:02,089 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-09-22 00:45:02,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:45:02,480 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-09-22 00:45:02,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:45:02,872 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-09-22 00:45:03,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:45:03,247 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-09-22 00:45:03,252 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-09-22 00:45:03,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:45:03,636 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-09-22 00:45:03,644 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-09-22 00:45:04,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:45:04,033 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-09-22 00:45:04,044 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-09-22 00:45:04,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:45:04,422 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-09-22 00:45:04,433 [ scc.config] DEBUG Found submodule.scripts.url 2024-09-22 00:45:04,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-22 00:45:04,797 [ scc.config] DEBUG Found submodule.scripts.branch 2024-09-22 00:45:04,797 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-22 00:45:04,882 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0421b67b80> has local changes 2024-09-22 00:45:04,882 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' (status: action_required) - PR 588 dependabot[bot] 'Bump dompurify from 2.4.3 to 2.5.4' (status: failure) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' - PR 587 will-moore 'Update licenses.txt' - PR 590 dependabot[bot] 'Bump vite from 3.2.10 to 3.2.11' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#191 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/191/)' 2024-09-22 00:45:04,897 [ scc.git] DEBUG [detached HEAD 97ba55f] merge master -Dorg -Ssuccess-only 2024-09-22 00:45:04,897 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-22 00:45:04,898 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-09-22 00:45:04,898 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,898 [ scc.merge] INFO 2024-09-22 00:45:04,898 [ scc.merge] INFO Merged PRs: 2024-09-22 00:45:04,898 [ scc.merge] INFO - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-22 00:45:04,898 [ scc.merge] INFO 2024-09-22 00:45:04,898 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-09-22 00:45:04,898 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,898 [ scc.merge] INFO 2024-09-22 00:45:04,898 [ scc.merge] INFO Merged PRs: 2024-09-22 00:45:04,898 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-09-22 00:45:04,898 [ scc.merge] INFO 2024-09-22 00:45:04,898 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-09-22 00:45:04,898 [ scc.merge] INFO Excluded PRs: 2024-09-22 00:45:04,898 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-09-22 00:45:04,898 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,898 [ scc.merge] INFO 2024-09-22 00:45:04,898 [ scc.merge] INFO Merged PRs: 2024-09-22 00:45:04,898 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-09-22 00:45:04,898 [ scc.merge] INFO 2024-09-22 00:45:04,898 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-09-22 00:45:04,898 [ scc.merge] INFO Excluded PRs: 2024-09-22 00:45:04,898 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-09-22 00:45:04,898 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-09-22 00:45:04,898 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-09-22 00:45:04,898 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-09-22 00:45:04,898 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,898 [ scc.merge] INFO 2024-09-22 00:45:04,899 [ scc.merge] INFO Merged PRs: 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-09-22 00:45:04,899 [ scc.merge] INFO 2024-09-22 00:45:04,899 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-09-22 00:45:04,899 [ scc.merge] INFO Excluded PRs: 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-22 00:45:04,899 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,899 [ scc.merge] INFO 2024-09-22 00:45:04,899 [ scc.merge] INFO Merged PRs: 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-09-22 00:45:04,899 [ scc.merge] INFO 2024-09-22 00:45:04,899 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-22 00:45:04,899 [ scc.merge] INFO 2024-09-22 00:45:04,899 [ scc.merge] INFO Repository: ome/omero-figure 2024-09-22 00:45:04,899 [ scc.merge] INFO Excluded PRs: 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' (status: action_required) 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 588 dependabot[bot] 'Bump dompurify from 2.4.3 to 2.5.4' (status: failure) 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-09-22 00:45:04,899 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,899 [ scc.merge] INFO 2024-09-22 00:45:04,899 [ scc.merge] INFO Merged PRs: 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 587 will-moore 'Update licenses.txt' 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 590 dependabot[bot] 'Bump vite from 3.2.10 to 3.2.11' 2024-09-22 00:45:04,899 [ scc.merge] INFO 2024-09-22 00:45:04,899 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-22 00:45:04,899 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-09-22 00:45:04,899 [ scc.merge] INFO 2024-09-22 00:45:04,899 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-09-22 00:45:04,900 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,900 [ scc.merge] INFO 2024-09-22 00:45:04,900 [ scc.merge] INFO Merged PRs: 2024-09-22 00:45:04,900 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-09-22 00:45:04,900 [ scc.merge] INFO 2024-09-22 00:45:04,900 [ scc.merge] INFO Repository: ome/omero-gallery 2024-09-22 00:45:04,900 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,900 [ scc.merge] INFO 2024-09-22 00:45:04,900 [ scc.merge] INFO Merged PRs: 2024-09-22 00:45:04,900 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-22 00:45:04,900 [ scc.merge] INFO 2024-09-22 00:45:04,900 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-09-22 00:45:04,900 [ scc.merge] INFO Excluded PRs: 2024-09-22 00:45:04,900 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-09-22 00:45:04,900 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-09-22 00:45:04,900 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-09-22 00:45:04,900 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,900 [ scc.merge] INFO 2024-09-22 00:45:04,900 [ scc.merge] INFO Merged PRs: 2024-09-22 00:45:04,900 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-09-22 00:45:04,900 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-09-22 00:45:04,900 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-22 00:45:04,900 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-22 00:45:04,900 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-22 00:45:04,900 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-22 00:45:04,900 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-22 00:45:04,900 [ scc.merge] INFO 2024-09-22 00:45:04,900 [ scc.merge] INFO Repository: ome/omero-mapr 2024-09-22 00:45:04,900 [ scc.merge] INFO Excluded PRs: 2024-09-22 00:45:04,900 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-09-22 00:45:04,900 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,900 [ scc.merge] INFO 2024-09-22 00:45:04,900 [ scc.merge] INFO Merged PRs: 2024-09-22 00:45:04,900 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-09-22 00:45:04,900 [ scc.merge] INFO 2024-09-22 00:45:04,900 [ scc.merge] INFO Repository: ome/omero-metadata 2024-09-22 00:45:04,900 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,901 [ scc.merge] INFO 2024-09-22 00:45:04,901 [ scc.merge] INFO Merged PRs: 2024-09-22 00:45:04,901 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-09-22 00:45:04,901 [ scc.merge] INFO 2024-09-22 00:45:04,901 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-22 00:45:04,901 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-22 00:45:04,901 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-22 00:45:04,901 [ scc.merge] INFO 2024-09-22 00:45:04,901 [ scc.merge] INFO Repository: ome/omero-parade 2024-09-22 00:45:04,901 [ scc.merge] INFO Excluded PRs: 2024-09-22 00:45:04,901 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-09-22 00:45:04,901 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-09-22 00:45:04,901 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-09-22 00:45:04,901 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,901 [ scc.merge] INFO 2024-09-22 00:45:04,901 [ scc.merge] INFO Merged PRs: 2024-09-22 00:45:04,901 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-22 00:45:04,901 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-22 00:45:04,901 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-22 00:45:04,901 [ scc.merge] INFO 2024-09-22 00:45:04,901 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-09-22 00:45:04,901 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,901 [ scc.merge] INFO 2024-09-22 00:45:04,901 [ scc.merge] INFO Merged PRs: 2024-09-22 00:45:04,901 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-09-22 00:45:04,901 [ scc.merge] INFO 2024-09-22 00:45:04,901 [ scc.merge] INFO Repository: ome/omero-rois 2024-09-22 00:45:04,901 [ scc.merge] INFO Excluded PRs: 2024-09-22 00:45:04,901 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-22 00:45:04,901 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,901 [ scc.merge] INFO 2024-09-22 00:45:04,901 [ scc.merge] INFO Merged PRs: 2024-09-22 00:45:04,901 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-22 00:45:04,901 [ scc.merge] INFO 2024-09-22 00:45:04,901 [ scc.merge] INFO Repository: ome/omero-signup 2024-09-22 00:45:04,901 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,901 [ scc.merge] INFO 2024-09-22 00:45:04,901 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-22 00:45:04,902 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-22 00:45:04,902 [ scc.merge] INFO 2024-09-22 00:45:04,902 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-09-22 00:45:04,902 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,902 [ scc.merge] INFO 2024-09-22 00:45:04,902 [ scc.merge] INFO Merged PRs: 2024-09-22 00:45:04,902 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-22 00:45:04,902 [ scc.merge] INFO 2024-09-22 00:45:04,902 [ scc.merge] INFO Repository: ome/omero-upload 2024-09-22 00:45:04,902 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,902 [ scc.merge] INFO 2024-09-22 00:45:04,902 [ scc.merge] INFO 2024-09-22 00:45:04,902 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-09-22 00:45:04,902 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,902 [ scc.merge] INFO 2024-09-22 00:45:04,902 [ scc.merge] INFO 2024-09-22 00:45:04,902 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-09-22 00:45:04,902 [ scc.merge] INFO Excluded PRs: 2024-09-22 00:45:04,902 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-09-22 00:45:04,902 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,902 [ scc.merge] INFO 2024-09-22 00:45:04,902 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-22 00:45:04,902 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-22 00:45:04,902 [ scc.merge] INFO 2024-09-22 00:45:04,902 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-09-22 00:45:04,902 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,902 [ scc.merge] INFO 2024-09-22 00:45:04,902 [ scc.merge] INFO 2024-09-22 00:45:04,902 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-09-22 00:45:04,902 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,902 [ scc.merge] INFO 2024-09-22 00:45:04,902 [ scc.merge] INFO 2024-09-22 00:45:04,902 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-09-22 00:45:04,902 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,902 [ scc.merge] INFO 2024-09-22 00:45:04,902 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-22 00:45:04,902 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-09-22 00:45:04,903 [ scc.merge] INFO 2024-09-22 00:45:04,903 [ scc.merge] INFO Repository: ome/scripts 2024-09-22 00:45:04,903 [ scc.merge] INFO Excluded PRs: 2024-09-22 00:45:04,903 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-09-22 00:45:04,903 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-09-22 00:45:04,903 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-09-22 00:45:04,903 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-09-22 00:45:04,903 [ scc.merge] INFO Already up to date. 2024-09-22 00:45:04,903 [ scc.merge] INFO 2024-09-22 00:45:04,903 [ scc.merge] INFO Merged PRs: 2024-09-22 00:45:04,903 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-09-22 00:45:04,903 [ scc.merge] INFO 2024-09-22 00:45:04,903 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-22 00:45:04,903 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-22 00:45:04,903 [ scc.merge] INFO 2024-09-22 00:45:04,903 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-22 00:45:04,903 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:04,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-22 00:45:04,909 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:04,916 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:04,916 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-22 00:45:04,916 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:04,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:04,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-22 00:45:04,924 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:04,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:04,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-22 00:45:04,932 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:04,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:04,940 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-22 00:45:04,940 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:04,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:04,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-22 00:45:04,947 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:04,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:04,954 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-22 00:45:04,954 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:04,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:04,961 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-22 00:45:04,961 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:04,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:04,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-22 00:45:04,968 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:04,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:04,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-22 00:45:04,974 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:04,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:04,982 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-22 00:45:04,982 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:04,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:04,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-22 00:45:04,989 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:04,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:04,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-22 00:45:04,996 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:05,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:05,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-22 00:45:05,002 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:05,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:05,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-22 00:45:05,009 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:05,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:05,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-22 00:45:05,015 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:05,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:05,022 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-22 00:45:05,022 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:05,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:05,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-22 00:45:05,035 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:05,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:05,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-22 00:45:05,044 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:05,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:05,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-22 00:45:05,050 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:05,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:05,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-22 00:45:05,068 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:05,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-22 00:45:05,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-22 00:45:05,091 [ scc.git] DEBUG Calling 'git remote' 2024-09-22 00:45:05,105 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD f4c9c02] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from f9a321dd nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD cc6cc04] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-22 00:45:52,393 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-22 00:46:01,421 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-22 00:46:03,784 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-22 00:46:08,356 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-22 00:46:47,692 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS