Started by upstream project "Trigger" build number 31 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/e9d96de4efbb3e39a2ce24824e54985c7c2760a6ed46c5415ea0aa1fd1e18d41/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 31 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.1.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.1.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.9.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.13.0-py3-none-any.whl.metadata (3.4 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-49.0.0-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.3 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.1.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (41 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.18-py3-none-any.whl.metadata (6.1 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.7.22-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.9.1-py3-none-any.whl (449 kB) Using cached pyjwt-2.13.0-py3-none-any.whl (31 kB) Using cached cryptography-49.0.0-cp311-abi3-manylinux_2_34_x86_64.whl (4.7 MB) Using cached cffi-2.1.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (221 kB) Using cached idna-3.18-py3-none-any.whl (65 kB) Using cached certifi-2026.7.22-py3-none-any.whl (136 kB) Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.9.1 PyYAML-6.0.3 certifi-2026.7.22 cffi-2.1.0 charset_normalizer-3.4.9 cryptography-49.0.0 future-1.0.0 idna-3.18 pycparser-3.0 pyjwt-2.13.0 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-07-27 01:28:41,414 [ scc.config] DEBUG Found github.token 2026-07-27 01:28:41,415 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-07-27 01:28:41,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:28:42,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:28:42,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-07-27 01:28:42,519 [ scc.gh] DEBUG 4901 remaining from 5000 (Reset at 02:07 2026-07-27 01:28:42,519 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:28:42,531 [ scc.git] DEBUG Check current status 2026-07-27 01:28:42,531 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:28:42,556 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-07-27 01:28:42,557 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:28:42,763 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-07-27 01:28:42,806 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-07-27 01:28:42,868 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-07-27 01:28:42,914 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-07-27 01:28:42,965 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-07-27 01:28:43,007 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-07-27 01:28:43,062 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-07-27 01:28:43,118 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-07-27 01:28:43,165 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-07-27 01:28:43,206 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-07-27 01:28:43,268 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-07-27 01:28:43,313 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-07-27 01:28:43,357 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-07-27 01:28:43,399 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-07-27 01:28:43,467 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-07-27 01:28:43,509 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-07-27 01:28:43,566 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-07-27 01:28:43,622 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-07-27 01:28:43,667 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-07-27 01:28:43,710 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-07-27 01:28:43,751 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-07-27 01:28:43,776 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-07-27 01:28:43,790 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:28:44,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-07-27 01:28:44,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:28:45,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:28:45,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:28:45,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:28:45,970 [ scc.git] DEBUG Resetting... 2026-07-27 01:28:45,970 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-07-27 01:28:46,268 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-07-27 01:28:46,269 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-07-27 01:28:47,476 [ scc.git] DEBUG Check current status 2026-07-27 01:28:47,476 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:28:47,496 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-07-27 01:28:47,497 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:28:47,703 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-07-27 01:28:47,738 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-07-27 01:28:47,770 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-07-27 01:28:47,806 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-07-27 01:28:47,852 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-07-27 01:28:47,889 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-07-27 01:28:47,930 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-07-27 01:28:47,978 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-07-27 01:28:48,020 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-07-27 01:28:48,059 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-07-27 01:28:48,096 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-07-27 01:28:48,131 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-07-27 01:28:48,162 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-07-27 01:28:48,192 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-07-27 01:28:48,225 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-07-27 01:28:48,262 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-07-27 01:28:48,299 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-07-27 01:28:48,337 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-07-27 01:28:48,371 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-07-27 01:28:48,408 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-07-27 01:28:48,440 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-07-27 01:28:48,460 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-07-27 01:28:48,461 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-07-27 01:28:48,461 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-07-27 01:28:48,461 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-07-27 01:28:48,461 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-07-27 01:28:48,461 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-07-27 01:28:48,461 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:28:48,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-07-27 01:28:49,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-07-27 01:28:49,246 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:28:49,246 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-07-27 01:28:49,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-07-27 01:28:49,744 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:28:49,744 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-07-27 01:28:50,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-07-27 01:28:50,226 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:28:50,226 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-07-27 01:28:50,226 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:28:50,226 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:28:50,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:28:50,239 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:28:50,257 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:28:50,257 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:28:50,276 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:28:50,329 [ scc.git] DEBUG Already up to date. 2026-07-27 01:28:50,329 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-07-27 01:28:50,761 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-27 01:28:50,761 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-07-27 01:28:50,789 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-07-27 01:28:51,198 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-27 01:28:51,198 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-07-27 01:28:51,225 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-07-27 01:28:51,621 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-27 01:28:51,622 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-07-27 01:28:51,651 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:28:51,651 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:28:51,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:28:51,663 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-07-27 01:28:51,686 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:28:51,696 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-07-27 01:28:52,389 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:28:52,470 [ scc.git] DEBUG scripts | 2 +- 2026-07-27 01:28:52,470 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-27 01:28:52,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:28:52,661 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-07-27 01:28:52,686 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:28:52,697 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-07-27 01:28:53,379 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:28:53,445 [ scc.git] DEBUG omero-figure | 2 +- 2026-07-27 01:28:53,445 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-27 01:28:53,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:28:53,634 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-07-27 01:28:53,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:28:53,671 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-07-27 01:28:54,348 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:28:54,408 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-07-27 01:28:54,408 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-27 01:28:54,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:28:54,601 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:28:55,346 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-07-27 01:28:56,197 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-07-27 01:28:56,472 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-07-27 01:28:56,473 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:28:56,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:28:56,485 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:28:58,740 [ scc.git] DEBUG has no local changes 2026-07-27 01:28:58,741 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:29:00,221 [ scc.git] DEBUG [detached HEAD c3b5250] merge master -Dorg -Snone 2026-07-27 01:29:00,223 [ scc.merge] INFO Repository: ome/omero-plugins 2026-07-27 01:29:00,223 [ scc.merge] INFO Already up to date. 2026-07-27 01:29:00,223 [ scc.merge] INFO 2026-07-27 01:29:00,223 [ scc.merge] INFO Merged PRs: 2026-07-27 01:29:00,223 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-07-27 01:29:00,223 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-07-27 01:29:00,223 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-07-27 01:29:00,223 [ scc.merge] INFO 2026-07-27 01:29:00,223 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-07-27 01:29:00,223 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' Submodule path 'omero-figure': checked out '188872793f83c8a30a4cda1d0db1412c61401c00' Submodule path 'omero-iviewer': checked out 'cae0b0260125ca856c05b4ac7d723879827a6e76' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-07-27 01:29:18,800 [ scc.config] DEBUG Found github.token 2026-07-27 01:29:18,802 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-07-27 01:29:19,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:29:19,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:29:19,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-07-27 01:29:19,904 [ scc.gh] DEBUG 4898 remaining from 5000 (Reset at 02:07 2026-07-27 01:29:19,905 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:29:19,918 [ scc.git] DEBUG Check current status 2026-07-27 01:29:19,918 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:29:19,941 [ scc.git] DEBUG c3b5250 merge master -Dorg -Snone 2026-07-27 01:29:19,942 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:29:20,155 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-07-27 01:29:20,196 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-07-27 01:29:20,241 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-07-27 01:29:20,282 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-07-27 01:29:20,327 [ scc.git] DEBUG +188872793f83c8a30a4cda1d0db1412c61401c00 omero-figure (v8.0.1.rc2-14-g18887279) 2026-07-27 01:29:20,365 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-07-27 01:29:20,405 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-07-27 01:29:20,453 [ scc.git] DEBUG +cae0b0260125ca856c05b4ac7d723879827a6e76 omero-iviewer (v0.17.0-3-gcae0b026) 2026-07-27 01:29:20,492 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-07-27 01:29:20,532 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-07-27 01:29:20,573 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-07-27 01:29:20,612 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-07-27 01:29:20,653 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-07-27 01:29:20,687 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-07-27 01:29:20,720 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-07-27 01:29:20,752 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-07-27 01:29:20,786 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-07-27 01:29:20,822 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-07-27 01:29:20,860 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-07-27 01:29:20,894 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-07-27 01:29:20,926 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-07-27 01:29:20,948 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-07-27 01:29:20,959 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:29:20,959 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-07-27 01:29:20,963 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-07-27 01:29:21,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-07-27 01:29:21,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:29:22,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:29:22,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:29:23,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:29:23,206 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:29:23,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-07-27 01:29:23,416 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:29:23,432 [ scc.git] DEBUG Check current status 2026-07-27 01:29:23,432 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:29:23,456 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-07-27 01:29:23,458 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:29:23,592 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:29:23,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-07-27 01:29:24,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:29:24,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:29:25,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:29:25,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:29:25,724 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:29:25,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:29:25,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-07-27 01:29:25,835 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:29:25,849 [ scc.git] DEBUG Check current status 2026-07-27 01:29:25,849 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:29:25,868 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-07-27 01:29:25,869 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:29:25,979 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:29:26,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-07-27 01:29:26,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:29:27,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:29:27,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:29:28,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:29:28,353 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:29:28,458 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:29:28,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-07-27 01:29:28,459 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:29:28,470 [ scc.git] DEBUG Check current status 2026-07-27 01:29:28,470 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:29:28,488 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-07-27 01:29:28,489 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:29:28,606 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:29:28,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-07-27 01:29:29,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:29:30,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:29:30,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:29:31,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:29:31,014 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:29:31,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:29:31,136 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-07-27 01:29:31,136 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:29:31,149 [ scc.git] DEBUG Check current status 2026-07-27 01:29:31,149 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:29:31,168 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-07-27 01:29:31,169 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:29:31,299 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:29:31,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-07-27 01:29:32,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:29:32,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:29:32,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:29:33,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:29:33,434 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:29:33,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:29:33,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-07-27 01:29:33,548 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:29:33,561 [ scc.git] DEBUG Check current status 2026-07-27 01:29:33,561 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:29:33,591 [ scc.git] DEBUG 18887279 Merge pull request #693 from ome/dependabot/npm_and_yarn/dompurify-3.4.9 2026-07-27 01:29:33,592 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:29:33,719 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:29:34,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-07-27 01:29:34,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:29:34,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:29:35,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:29:35,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:29:35,908 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:29:36,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:29:36,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-07-27 01:29:36,019 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:29:36,034 [ scc.git] DEBUG Check current status 2026-07-27 01:29:36,034 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:29:36,054 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-07-27 01:29:36,055 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:29:36,168 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:29:36,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-07-27 01:29:36,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:29:37,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:29:37,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:29:38,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:29:38,322 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:29:38,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:29:38,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-07-27 01:29:38,438 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:29:38,452 [ scc.git] DEBUG Check current status 2026-07-27 01:29:38,452 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:29:38,475 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-07-27 01:29:38,476 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:29:38,599 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:29:38,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-07-27 01:29:39,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:29:39,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:29:40,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:29:40,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:29:40,762 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:29:40,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:29:40,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-07-27 01:29:40,885 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:29:40,901 [ scc.git] DEBUG Check current status 2026-07-27 01:29:40,901 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:29:40,925 [ scc.git] DEBUG cae0b026 Merge pull request #534 from will-moore/fix_docs_settings_link 2026-07-27 01:29:40,927 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:29:41,057 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:29:41,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-07-27 01:29:41,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:29:42,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:29:42,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:29:43,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:29:43,292 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:29:43,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:29:43,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-07-27 01:29:43,407 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:29:43,423 [ scc.git] DEBUG Check current status 2026-07-27 01:29:43,423 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:29:43,445 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-07-27 01:29:43,447 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:29:43,569 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:29:43,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-07-27 01:29:44,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:29:45,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:29:45,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:29:46,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:29:46,066 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:29:46,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:29:46,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-07-27 01:29:46,183 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:29:46,198 [ scc.git] DEBUG Check current status 2026-07-27 01:29:46,198 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:29:46,216 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-07-27 01:29:46,217 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:29:46,331 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:29:46,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-07-27 01:29:47,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:29:47,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:29:48,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:29:48,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:29:48,820 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:29:48,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:29:48,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-07-27 01:29:48,939 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:29:48,955 [ scc.git] DEBUG Check current status 2026-07-27 01:29:48,955 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:29:48,978 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-07-27 01:29:48,979 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:29:49,109 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:29:49,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-07-27 01:29:49,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:29:50,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:29:50,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:29:51,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:29:51,534 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:29:51,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:29:51,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-07-27 01:29:51,648 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:29:51,666 [ scc.git] DEBUG Check current status 2026-07-27 01:29:51,667 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:29:51,686 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-07-27 01:29:51,687 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:29:51,804 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:29:52,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-07-27 01:29:52,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:29:53,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:29:53,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:29:54,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:29:54,112 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:29:54,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:29:54,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-07-27 01:29:54,234 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:29:54,250 [ scc.git] DEBUG Check current status 2026-07-27 01:29:54,250 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:29:54,272 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-07-27 01:29:54,273 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:29:54,403 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:29:54,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-07-27 01:29:55,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:29:55,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:29:56,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:29:56,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:29:56,661 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:29:56,782 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:29:56,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-07-27 01:29:56,783 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:29:56,808 [ scc.git] DEBUG Check current status 2026-07-27 01:29:56,808 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:29:56,831 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-07-27 01:29:56,832 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:29:56,961 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:29:57,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-07-27 01:29:57,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:29:58,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:29:58,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:29:59,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:29:59,300 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:29:59,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:29:59,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-07-27 01:29:59,419 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:29:59,434 [ scc.git] DEBUG Check current status 2026-07-27 01:29:59,434 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:29:59,454 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-07-27 01:29:59,456 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:29:59,580 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:29:59,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-07-27 01:29:59,792 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-07-27 01:30:00,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-07-27 01:30:00,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:30:01,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:30:01,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:30:02,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:30:02,111 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:30:02,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:30:02,232 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-07-27 01:30:02,232 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:30:02,250 [ scc.git] DEBUG Check current status 2026-07-27 01:30:02,250 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:30:02,273 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-07-27 01:30:02,274 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:30:02,398 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:30:02,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-07-27 01:30:03,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:30:03,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:30:04,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:30:05,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:30:05,260 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:30:05,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:30:05,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-07-27 01:30:05,361 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:30:05,373 [ scc.git] DEBUG Check current status 2026-07-27 01:30:05,373 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:30:05,391 [ scc.git] DEBUG 160d894 Fix display of code 2026-07-27 01:30:05,392 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:30:05,513 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:30:05,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-07-27 01:30:06,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:30:07,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:30:07,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:30:08,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:30:08,368 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:30:08,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:30:08,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-07-27 01:30:08,474 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:30:08,486 [ scc.git] DEBUG Check current status 2026-07-27 01:30:08,486 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:30:08,503 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-07-27 01:30:08,503 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:30:08,618 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:30:08,619 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-07-27 01:30:09,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-07-27 01:30:09,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:30:12,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:30:13,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:30:13,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:30:13,878 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:30:13,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:30:13,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-07-27 01:30:13,981 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:30:14,013 [ scc.git] DEBUG Check current status 2026-07-27 01:30:14,013 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:30:14,037 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-07-27 01:30:14,038 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:30:14,175 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:30:14,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-07-27 01:30:14,647 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-07-27 01:30:15,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-07-27 01:30:15,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:30:16,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:30:16,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:30:17,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:30:17,367 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:30:17,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:30:17,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-07-27 01:30:17,494 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:30:17,509 [ scc.git] DEBUG Check current status 2026-07-27 01:30:17,509 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:30:17,531 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-07-27 01:30:17,532 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:30:26,939 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:30:27,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-07-27 01:30:27,188 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-07-27 01:30:28,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-07-27 01:30:28,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:30:29,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:30:29,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:30:30,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:30:30,401 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:30:30,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:30:30,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-07-27 01:30:30,519 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:30:30,538 [ scc.git] DEBUG Check current status 2026-07-27 01:30:30,538 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:30:30,564 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-07-27 01:30:30,565 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:30:30,689 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:30:31,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-07-27 01:30:31,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:30:32,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:30:32,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:30:33,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:30:33,284 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:30:33,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:30:33,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-07-27 01:30:33,412 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-27 01:30:33,439 [ scc.git] DEBUG Check current status 2026-07-27 01:30:33,439 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:30:33,483 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-07-27 01:30:33,484 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:30:33,641 [ scc.config] DEBUG Found remote.origin.url 2026-07-27 01:30:33,642 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-07-27 01:30:34,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-07-27 01:30:34,039 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-07-27 01:30:34,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-07-27 01:30:34,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-27 01:30:35,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-27 01:30:35,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-27 01:30:36,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-27 01:30:36,283 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:30:36,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:30:36,416 [ scc.git] DEBUG Resetting... 2026-07-27 01:30:36,416 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-07-27 01:30:37,050 [ scc.git] DEBUG HEAD is now at c3b5250 merge master -Dorg -Snone 2026-07-27 01:30:37,051 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-07-27 01:30:38,976 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-07-27 01:30:40,196 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-07-27 01:30:45,349 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-07-27 01:30:46,319 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-07-27 01:30:46,780 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-07-27 01:30:47,505 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-07-27 01:30:50,004 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-07-27 01:30:50,655 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-07-27 01:30:51,026 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-07-27 01:30:51,889 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-07-27 01:30:51,910 [ scc.git] DEBUG Check current status 2026-07-27 01:30:51,910 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-27 01:30:51,944 [ scc.git] DEBUG c3b5250 merge master -Dorg -Snone 2026-07-27 01:30:51,944 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-27 01:30:52,160 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-07-27 01:30:52,200 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-07-27 01:30:52,237 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-07-27 01:30:52,291 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-07-27 01:30:52,344 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-07-27 01:30:52,383 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-07-27 01:30:52,425 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-07-27 01:30:52,478 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798cee) 2026-07-27 01:30:52,521 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-07-27 01:30:52,564 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-07-27 01:30:52,613 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-07-27 01:30:52,658 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-07-27 01:30:52,700 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-07-27 01:30:52,751 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-07-27 01:30:52,794 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-07-27 01:30:52,847 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-07-27 01:30:52,887 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-07-27 01:30:52,926 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-07-27 01:30:52,967 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-07-27 01:30:53,010 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-07-27 01:30:53,049 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-07-27 01:30:53,077 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-07-27 01:30:53,078 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-07-27 01:30:53,078 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-07-27 01:30:53,078 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-07-27 01:30:53,078 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-07-27 01:30:53,078 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-07-27 01:30:53,078 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-07-27 01:30:53,078 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:30:53,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-07-27 01:30:53,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-07-27 01:30:53,939 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:30:54,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-07-27 01:30:55,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:30:55,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-07-27 01:30:56,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:30:56,086 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-07-27 01:30:56,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-07-27 01:30:56,642 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:30:57,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-07-27 01:30:58,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:30:58,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-07-27 01:30:59,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:30:59,057 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-07-27 01:30:59,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-07-27 01:30:59,528 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:31:00,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:00,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:31:01,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:01,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:31:01,888 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-07-27 01:31:01,888 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:31:01,888 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:31:01,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:01,906 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:31:01,925 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:31:01,925 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:31:01,952 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:31:02,019 [ scc.git] DEBUG Already up to date. 2026-07-27 01:31:02,019 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-07-27 01:31:02,466 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-27 01:31:02,466 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-07-27 01:31:02,783 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-07-27 01:31:03,214 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-27 01:31:03,214 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-07-27 01:31:03,334 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-07-27 01:31:03,855 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-27 01:31:03,855 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-07-27 01:31:04,002 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:31:04,002 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:31:04,002 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:04,072 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-07-27 01:31:04,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:04,147 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-07-27 01:31:04,414 [ scc.git] DEBUG Already up to date. 2026-07-27 01:31:04,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:31:04,623 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-07-27 01:31:05,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:05,184 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-07-27 01:31:05,666 [ scc.git] DEBUG Already up to date. 2026-07-27 01:31:05,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:31:05,879 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-07-27 01:31:05,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:05,998 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-07-27 01:31:06,470 [ scc.git] DEBUG Already up to date. 2026-07-27 01:31:06,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:31:06,688 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:31:07,825 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:31:07,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:07,838 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:31:08,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-07-27 01:31:08,069 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:31:08,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-07-27 01:31:08,069 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:31:08,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:08,107 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:31:08,148 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:31:08,148 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:31:08,223 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:31:08,458 [ scc.git] DEBUG Already up to date. 2026-07-27 01:31:08,458 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:31:08,458 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:31:08,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:08,481 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:31:08,612 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:31:08,612 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:08,639 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:31:08,771 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:31:08,868 [ scc.git] DEBUG has no local changes 2026-07-27 01:31:08,868 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:31:09,427 [ scc.git] DEBUG [detached HEAD da4b83a] merge master -Dorg -Ssuccess-only 2026-07-27 01:31:09,429 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:31:09,429 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:31:09,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-07-27 01:31:10,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-07-27 01:31:10,313 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:31:11,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:12,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:31:12,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:31:13,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:13,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:31:13,689 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:31:14,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-07-27 01:31:14,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-07-27 01:31:14,756 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:31:14,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-07-27 01:31:14,756 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:31:14,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:14,786 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:31:14,805 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:31:14,805 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:31:14,848 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:31:14,998 [ scc.git] DEBUG Already up to date. 2026-07-27 01:31:14,998 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-07-27 01:31:15,420 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-07-27 01:31:15,420 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-07-27 01:31:15,475 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:31:15,489 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:31:15,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:15,738 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-07-27 01:31:15,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:15,924 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-07-27 01:31:17,290 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:31:17,465 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-27 01:31:17,465 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-27 01:31:17,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:31:17,661 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:31:17,805 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:31:17,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:17,832 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:31:17,955 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:31:18,024 [ scc.git] DEBUG has no local changes 2026-07-27 01:31:18,024 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:31:18,326 [ scc.git] DEBUG [detached HEAD 17a95a8] merge master -Dorg -Ssuccess-only 2026-07-27 01:31:18,328 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:31:18,328 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:31:18,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-07-27 01:31:19,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-07-27 01:31:19,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-07-27 01:31:20,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:20,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:31:21,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:31:22,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:22,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:31:22,539 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-07-27 01:31:23,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-07-27 01:31:24,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-07-27 01:31:24,475 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:31:24,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-07-27 01:31:24,476 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:31:24,476 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:24,495 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:31:24,519 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:31:24,519 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:31:24,581 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:31:25,852 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-07-27 01:31:26,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-07-27 01:31:27,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-07-27 01:31:28,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-07-27 01:31:29,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-07-27 01:31:29,503 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-07-27 01:31:30,505 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-07-27 01:31:30,505 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-07-27 01:31:30,568 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:31:30,568 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:31:30,568 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:30,610 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-07-27 01:31:30,665 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:30,684 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-07-27 01:31:31,055 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-07-27 01:31:31,153 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:31:31,251 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-07-27 01:31:31,252 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-07-27 01:31:31,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:31:31,650 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:31:31,783 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:31:31,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:31:31,797 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:31:31,899 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:31:32,002 [ scc.git] DEBUG has no local changes 2026-07-27 01:31:32,002 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:31:33,827 [ scc.git] DEBUG [detached HEAD 068757c] merge master -Dorg -Ssuccess-only 2026-07-27 01:31:33,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:31:33,829 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:31:34,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-07-27 01:31:34,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/196 HTTP/1.1" 200 None 2026-07-27 01:31:35,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:35,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:31:36,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:31:37,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:37,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/eeaeaa9e3789fce6809def20cd9a43f37f61668f?per_page=1 HTTP/1.1" 200 None 2026-07-27 01:31:38,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:38,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/status HTTP/1.1" 200 None 2026-07-27 01:31:38,782 [ scc.repo] DEBUG - PR 196 will-moore 'Storage options only if needed' 2026-07-27 01:31:39,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/194 HTTP/1.1" 200 None 2026-07-27 01:31:39,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:40,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:31:40,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:31:41,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None 2026-07-27 01:31:41,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:42,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:31:42,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:31:43,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:43,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None 2026-07-27 01:31:44,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:44,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None 2026-07-27 01:31:44,933 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated' 2026-07-27 01:31:45,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-07-27 01:31:45,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-07-27 01:31:46,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:47,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:31:47,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:31:48,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:48,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-07-27 01:31:49,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:49,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-07-27 01:31:49,741 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-07-27 01:31:50,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-07-27 01:31:50,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-07-27 01:31:51,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-07-27 01:31:51,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-07-27 01:31:52,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:53,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:31:53,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:31:54,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:54,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-07-27 01:31:55,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:55,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-07-27 01:31:55,649 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-07-27 01:31:56,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-07-27 01:31:56,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-07-27 01:31:57,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:57,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:31:58,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:31:58,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-07-27 01:31:59,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-07-27 01:31:59,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-07-27 01:32:00,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-07-27 01:32:00,498 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-07-27 01:32:00,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-07-27 01:32:01,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-07-27 01:32:01,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-07-27 01:32:02,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-07-27 01:32:02,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-07-27 01:32:03,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-07-27 01:32:03,555 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:32:03,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-07-27 01:32:03,556 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:32:03,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:32:03,577 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:32:03,604 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:32:03,605 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:32:03,725 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:32:04,481 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-07-27 01:32:05,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-07-27 01:32:06,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-07-27 01:32:07,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-07-27 01:32:08,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-07-27 01:32:08,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-07-27 01:32:09,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-07-27 01:32:10,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-07-27 01:32:11,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-07-27 01:32:12,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-07-27 01:32:13,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-07-27 01:32:14,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-07-27 01:32:15,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-07-27 01:32:15,350 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-07-27 01:32:16,362 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-07-27 01:32:16,362 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-07-27 01:32:16,425 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-07-27 01:32:16,979 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-07-27 01:32:16,979 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-07-27 01:32:17,034 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-07-27 01:32:17,535 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-07-27 01:32:17,535 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-07-27 01:32:17,623 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head' 2026-07-27 01:32:18,087 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-07-27 01:32:18,087 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD 2026-07-27 01:32:18,113 [ scc.git] DEBUG Calling 'git fetch origin pull/196/head' 2026-07-27 01:32:18,701 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-07-27 01:32:18,701 [ scc.git] DEBUG * branch refs/pull/196/head -> FETCH_HEAD 2026-07-27 01:32:18,740 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:32:18,740 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:32:18,741 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:32:18,762 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-07-27 01:32:18,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:32:18,842 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-07-27 01:32:19,483 [ scc.git] DEBUG Auto-merging README.rst 2026-07-27 01:32:19,483 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-07-27 01:32:19,483 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-07-27 01:32:19,483 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-07-27 01:32:19,483 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-07-27 01:32:19,483 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-07-27 01:32:19,483 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-07-27 01:32:19,483 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-07-27 01:32:19,483 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-07-27 01:32:19,483 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-07-27 01:32:19,483 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-07-27 01:32:19,534 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-27 01:32:19,535 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-27 01:32:19,583 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-27 01:32:20,060 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-07-27 01:32:20,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:32:20,408 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-07-27 01:32:20,483 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-27 01:32:20,566 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#20](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py - src/omero_zarr/masks.py - src/omero_zarr/cli.py - test/integration/clitest/test_export.py - src/omero_zarr/util.py --conflicts 2026-07-27 01:32:20,663 [ scc.config] DEBUG Found github.token 2026-07-27 01:32:20,663 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-07-27 01:32:20,663 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-07-27 01:32:20,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:32:20,753 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-07-27 01:32:21,486 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-07-27 01:32:21,486 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-07-27 01:32:21,486 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-07-27 01:32:21,486 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-07-27 01:32:21,692 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-27 01:32:21,693 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-27 01:32:21,778 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-27 01:32:22,356 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-07-27 01:32:22,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:32:22,537 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-07-27 01:32:22,573 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-27 01:32:22,648 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#20](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - test/integration/clitest/test_export.py - src/omero_zarr/masks.py - Upstream changes - test/integration/clitest/test_export.py - src/omero_zarr/masks.py --conflicts 2026-07-27 01:32:22,696 [ scc.config] DEBUG Found github.token 2026-07-27 01:32:22,696 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-07-27 01:32:22,696 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-07-27 01:32:22,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:32:22,782 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-07-27 01:32:23,414 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-07-27 01:32:23,418 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-07-27 01:32:23,418 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-07-27 01:32:23,418 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-07-27 01:32:23,418 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-07-27 01:32:23,484 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-27 01:32:23,486 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-27 01:32:23,521 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-27 01:32:23,780 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-07-27 01:32:23,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:32:23,966 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-07-27 01:32:24,002 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-27 01:32:24,032 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#20](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/consoleText) for more details. Possible conflicts: - Upstream changes - test/integration/clitest/test_import.py - src/omero_zarr/zarr_import.py --conflicts 2026-07-27 01:32:24,049 [ scc.config] DEBUG Found github.token 2026-07-27 01:32:24,049 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-07-27 01:32:24,049 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-07-27 01:32:24,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:32:24,101 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-07-27 01:32:24,442 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:32:24,570 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++ 2026-07-27 01:32:24,570 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++------------------- 2026-07-27 01:32:24,570 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-) 2026-07-27 01:32:24,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:32:24,768 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eeaeaa9e3789fce6809def20cd9a43f37f61668f' 2026-07-27 01:32:24,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:32:24,852 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 196 (Storage options only if needed) eeaeaa9e3789fce6809def20cd9a43f37f61668f' 2026-07-27 01:32:26,220 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-07-27 01:32:26,859 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:32:27,889 [ scc.git] DEBUG .pre-commit-config.yaml | 2 +- 2026-07-27 01:32:27,889 [ scc.git] DEBUG src/omero_zarr/masks.py | 10 ++++++++++ 2026-07-27 01:32:27,889 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 6 ++---- 2026-07-27 01:32:27,889 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 3 ++- 2026-07-27 01:32:27,890 [ scc.git] DEBUG test/integration/clitest/test_export.py | 2 +- 2026-07-27 01:32:27,890 [ scc.git] DEBUG 5 files changed, 16 insertions(+), 7 deletions(-) 2026-07-27 01:32:28,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:32:28,093 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:32:28,346 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:32:28,346 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:32:28,372 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:32:28,516 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:32:28,676 [ scc.git] DEBUG has no local changes 2026-07-27 01:32:28,676 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' - PR 196 will-moore 'Storage options only if needed' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:32:28,914 [ scc.git] DEBUG [detached HEAD f4e4383] merge master -Dorg -Ssuccess-only 2026-07-27 01:32:28,916 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:32:28,917 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:32:29,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-07-27 01:32:29,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/696 HTTP/1.1" 200 None 2026-07-27 01:32:29,848 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:32:30,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226?page=1 HTTP/1.1" 200 None 2026-07-27 01:32:31,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:32:31,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:32:32,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226?page=1 HTTP/1.1" 200 None 2026-07-27 01:32:32,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/abde8720db39ce43974f7b5c8d717eb52472b226?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:32:32,642 [ scc.repo] DEBUG - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' 2026-07-27 01:32:33,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/695 HTTP/1.1" 200 None 2026-07-27 01:32:33,093 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:32:33,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8?page=1 HTTP/1.1" 200 None 2026-07-27 01:32:34,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:32:34,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:32:35,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8?page=1 HTTP/1.1" 200 None 2026-07-27 01:32:35,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6a1c677b187fbe3fefabeebba659660e1c08dad8?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:32:35,906 [ scc.repo] DEBUG - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' 2026-07-27 01:32:36,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/692 HTTP/1.1" 200 None 2026-07-27 01:32:36,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2?page=1 HTTP/1.1" 200 None 2026-07-27 01:32:37,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:32:37,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:32:38,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2?page=1 HTTP/1.1" 200 None 2026-07-27 01:32:38,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/123f30064dc116c09098786206e54f8ec811c2c2?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:32:38,978 [ scc.repo] DEBUG - PR 692 will-moore 'colorbar lut background fix' 2026-07-27 01:32:39,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-07-27 01:32:39,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-07-27 01:32:39,972 [ scc.repo] DEBUG # ... Include label: include 2026-07-27 01:32:40,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-07-27 01:32:41,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:32:41,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:32:42,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-07-27 01:32:42,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:32:42,701 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-07-27 01:32:42,701 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:32:42,701 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-07-27 01:32:42,702 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:32:42,703 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:32:42,743 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:32:42,823 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:32:42,824 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:32:43,016 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:32:46,838 [ scc.git] ERROR stderr (git merge --ff-only origin/master): Updating files: 9% (8/82) Updating files: 10% (9/82) Updating files: 12% (10/82) Updating files: 13% (11/82) Updating files: 14% (12/82) Updating files: 15% (13/82) Updating files: 17% (14/82) Updating files: 18% (15/82) Updating files: 19% (16/82) Updating files: 20% (17/82) Updating files: 21% (18/82) Updating files: 23% (19/82) Updating files: 24% (20/82) Updating files: 25% (21/82) Updating files: 26% (22/82) Updating files: 28% (23/82) Updating files: 29% (24/82) Updating files: 30% (25/82) Updating files: 31% (26/82) Updating files: 32% (27/82) Updating files: 34% (28/82) Updating files: 35% (29/82) Updating files: 36% (30/82) Updating files: 37% (31/82) Updating files: 39% (32/82) Updating files: 40% (33/82) Updating files: 41% (34/82) Updating files: 42% (35/82) Updating files: 43% (36/82) Updating files: 45% (37/82) Updating files: 46% (38/82) Updating files: 47% (39/82) Updating files: 48% (40/82) Updating files: 50% (41/82) Updating files: 51% (42/82) Updating files: 52% (43/82) Updating files: 53% (44/82) Updating files: 54% (45/82) Updating files: 56% (46/82) Updating files: 57% (47/82) Updating files: 58% (48/82) Updating files: 59% (49/82) Updating files: 60% (50/82) Updating files: 62% (51/82) Updating files: 63% (52/82) Updating files: 64% (53/82) Updating files: 65% (54/82) Updating files: 67% (55/82) Updating files: 68% (56/82) Updating files: 69% (57/82) Updating files: 70% (58/82) Updating files: 71% (59/82) Updating files: 73% (60/82) Updating files: 74% (61/82) Updating files: 75% (62/82) Updating files: 76% (63/82) Updating files: 78% (64/82) Updating files: 79% (65/82) Updating files: 80% (66/82) Updating files: 81% (67/82) Updating files: 82% (68/82) Updating files: 84% (69/82) Updating files: 85% (70/82) Updating files: 86% (71/82) Updating files: 87% (72/82) Updating files: 89% (73/82) Updating files: 90% (74/82) Updating files: 91% (75/82) Updating files: 92% (76/82) Updating files: 93% (77/82) Updating files: 95% (78/82) Updating files: 96% (79/82) Updating files: 97% (80/82) Updating files: 98% (81/82) Updating files: 100% (82/82) Updating files: 100% (82/82), done. 2026-07-27 01:32:46,839 [ scc.git] DEBUG Updating 9cc36cde..18887279 2026-07-27 01:32:47,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/693 HTTP/1.1" 200 None 2026-07-27 01:32:48,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/691 HTTP/1.1" 200 None 2026-07-27 01:32:49,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/686 HTTP/1.1" 200 None 2026-07-27 01:32:50,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/690 HTTP/1.1" 200 None 2026-07-27 01:32:51,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/681 HTTP/1.1" 200 None 2026-07-27 01:32:52,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/688 HTTP/1.1" 200 None 2026-07-27 01:32:52,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/685 HTTP/1.1" 200 None 2026-07-27 01:32:53,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/683 HTTP/1.1" 200 None 2026-07-27 01:32:54,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/680 HTTP/1.1" 200 None 2026-07-27 01:32:55,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/684 HTTP/1.1" 200 None 2026-07-27 01:32:57,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/682 HTTP/1.1" 200 None 2026-07-27 01:32:58,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/679 HTTP/1.1" 200 None 2026-07-27 01:32:59,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/677 HTTP/1.1" 200 None 2026-07-27 01:33:00,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/666 HTTP/1.1" 200 None 2026-07-27 01:33:01,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/676 HTTP/1.1" 200 None 2026-07-27 01:33:02,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/669 HTTP/1.1" 200 None 2026-07-27 01:33:03,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/662 HTTP/1.1" 200 None 2026-07-27 01:33:04,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/663 HTTP/1.1" 200 None 2026-07-27 01:33:04,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-07-27 01:33:05,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-07-27 01:33:06,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-07-27 01:33:07,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-07-27 01:33:08,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-07-27 01:33:09,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-07-27 01:33:10,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-07-27 01:33:11,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-07-27 01:33:12,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-07-27 01:33:13,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-07-27 01:33:13,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-07-27 01:33:14,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-07-27 01:33:15,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-07-27 01:33:16,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-07-27 01:33:17,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-07-27 01:33:18,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-07-27 01:33:19,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-07-27 01:33:20,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-07-27 01:33:21,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-07-27 01:33:22,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-07-27 01:33:23,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-07-27 01:33:24,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-07-27 01:33:24,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-07-27 01:33:25,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-07-27 01:33:26,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-07-27 01:33:27,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-07-27 01:33:28,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-07-27 01:33:29,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-07-27 01:33:30,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-07-27 01:33:30,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-07-27 01:33:31,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-07-27 01:33:32,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-07-27 01:33:32,587 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-07-27 01:33:33,314 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-07-27 01:33:33,314 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-07-27 01:33:33,378 [ scc.git] DEBUG Calling 'git fetch origin pull/692/head' 2026-07-27 01:33:34,020 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-07-27 01:33:34,020 [ scc.git] DEBUG * branch refs/pull/692/head -> FETCH_HEAD 2026-07-27 01:33:34,154 [ scc.git] DEBUG Calling 'git fetch origin pull/695/head' 2026-07-27 01:33:34,601 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-07-27 01:33:34,602 [ scc.git] DEBUG * branch refs/pull/695/head -> FETCH_HEAD 2026-07-27 01:33:34,633 [ scc.git] DEBUG Calling 'git fetch origin pull/696/head' 2026-07-27 01:33:35,079 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-07-27 01:33:35,079 [ scc.git] DEBUG * branch refs/pull/696/head -> FETCH_HEAD 2026-07-27 01:33:35,115 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:33:35,115 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:33:35,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:33:35,140 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-07-27 01:33:35,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:33:35,231 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-07-27 01:33:36,216 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-07-27 01:33:36,216 [ scc.git] DEBUG Auto-merging src/index.html 2026-07-27 01:33:36,216 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-07-27 01:33:36,725 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:33:37,728 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-07-27 01:33:37,728 [ scc.git] DEBUG src/index.html | 11 ++ 2026-07-27 01:33:37,728 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-07-27 01:33:37,728 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-07-27 01:33:37,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:33:37,927 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...123f30064dc116c09098786206e54f8ec811c2c2' 2026-07-27 01:33:38,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:33:38,042 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 692 (colorbar lut background fix) 123f30064dc116c09098786206e54f8ec811c2c2' 2026-07-27 01:33:39,226 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:33:39,362 [ scc.git] DEBUG src/js/views/panel_view.js | 5 +++++ 2026-07-27 01:33:39,362 [ scc.git] DEBUG src/templates/colorbar.template.html | 2 +- 2026-07-27 01:33:39,362 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 1 deletion(-) 2026-07-27 01:33:39,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:33:39,604 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a1c677b187fbe3fefabeebba659660e1c08dad8' 2026-07-27 01:33:39,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:33:39,705 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 695 (Bump immutable from 5.1.6 to 5.1.9) 6a1c677b187fbe3fefabeebba659660e1c08dad8' 2026-07-27 01:33:40,206 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:33:40,317 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-07-27 01:33:40,317 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-07-27 01:33:40,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:33:40,495 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...abde8720db39ce43974f7b5c8d717eb52472b226' 2026-07-27 01:33:40,561 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:33:40,583 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 696 (Bump dompurify from 3.4.9 to 3.4.12) abde8720db39ce43974f7b5c8d717eb52472b226' 2026-07-27 01:33:41,304 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:33:42,053 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:33:43,063 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2026-07-27 01:33:43,063 [ scc.git] DEBUG package.json | 2 +- 2026-07-27 01:33:43,063 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2026-07-27 01:33:43,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:33:43,266 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:33:43,426 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:33:43,426 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:33:43,478 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:33:43,636 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:33:43,826 [ scc.git] DEBUG has no local changes 2026-07-27 01:33:43,826 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Updating 9cc36cde..18887279 Previously merged: - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 692 will-moore 'colorbar lut background fix' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:33:44,203 [ scc.git] DEBUG [detached HEAD 8c488a43] merge master -Dorg -Ssuccess-only 2026-07-27 01:33:44,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:33:44,205 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:33:44,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-07-27 01:33:45,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-07-27 01:33:45,028 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:33:45,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-07-27 01:33:46,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:33:46,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:33:47,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-07-27 01:33:47,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:33:48,419 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:33:48,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-07-27 01:33:49,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-07-27 01:33:49,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-07-27 01:33:50,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:33:50,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-07-27 01:33:51,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:33:51,438 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-07-27 01:33:51,438 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:33:51,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-07-27 01:33:51,440 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:33:51,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:33:51,466 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:33:51,512 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:33:51,512 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:33:51,552 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:33:51,719 [ scc.git] DEBUG Already up to date. 2026-07-27 01:33:51,719 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-07-27 01:33:52,218 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-07-27 01:33:52,218 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-07-27 01:33:52,386 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-07-27 01:33:52,811 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-07-27 01:33:52,811 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-07-27 01:33:53,303 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:33:53,303 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:33:53,303 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:33:53,405 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-07-27 01:33:53,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:33:53,472 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-07-27 01:33:54,179 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-07-27 01:33:54,678 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:33:54,784 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-07-27 01:33:54,784 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-07-27 01:33:54,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:33:54,980 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-07-27 01:33:55,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:33:55,031 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-07-27 01:33:55,501 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:33:55,647 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-27 01:33:55,647 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-27 01:33:55,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:33:55,854 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:33:55,995 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:33:55,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:33:56,011 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:33:56,123 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:33:56,220 [ scc.git] DEBUG has no local changes 2026-07-27 01:33:56,220 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:33:56,525 [ scc.git] DEBUG [detached HEAD 9d7ac87] merge master -Dorg -Ssuccess-only 2026-07-27 01:33:56,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:33:56,527 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:33:56,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-07-27 01:33:57,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-07-27 01:33:57,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-07-27 01:33:58,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-07-27 01:33:58,434 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:33:59,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-07-27 01:33:59,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:34:00,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:00,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:34:00,555 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-07-27 01:34:01,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-07-27 01:34:01,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-07-27 01:34:02,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-07-27 01:34:02,099 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:34:02,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:03,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:34:04,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:04,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:34:04,646 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-07-27 01:34:05,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-07-27 01:34:05,242 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:34:05,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:06,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:34:06,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:07,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:34:07,277 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-07-27 01:34:07,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-07-27 01:34:07,788 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:34:08,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:08,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:34:09,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:09,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:34:09,943 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-07-27 01:34:10,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-07-27 01:34:10,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-07-27 01:34:10,918 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:34:11,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:12,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:34:12,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:13,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:34:13,038 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-07-27 01:34:13,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-07-27 01:34:13,534 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:34:14,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:14,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:34:15,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:15,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:34:15,548 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-07-27 01:34:16,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-07-27 01:34:16,014 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:34:16,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:17,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:34:17,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:18,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:34:18,099 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-07-27 01:34:18,099 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:34:18,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-07-27 01:34:18,101 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:34:18,101 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:34:18,134 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:34:18,163 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:34:18,163 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:34:18,195 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:34:18,371 [ scc.git] DEBUG Already up to date. 2026-07-27 01:34:18,371 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-07-27 01:34:18,800 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-27 01:34:18,800 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-07-27 01:34:19,790 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-07-27 01:34:20,206 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-27 01:34:20,207 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-07-27 01:34:20,248 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-07-27 01:34:20,646 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-27 01:34:20,646 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-07-27 01:34:20,719 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-07-27 01:34:21,100 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-27 01:34:21,101 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-07-27 01:34:21,135 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-07-27 01:34:21,574 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-27 01:34:21,574 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-07-27 01:34:21,609 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-07-27 01:34:22,027 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-27 01:34:22,027 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-07-27 01:34:22,063 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-07-27 01:34:22,464 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-27 01:34:22,464 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-07-27 01:34:22,505 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:34:22,506 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:34:22,506 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:34:22,527 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-07-27 01:34:22,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:34:22,580 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-07-27 01:34:23,580 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:34:24,059 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-07-27 01:34:24,059 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-07-27 01:34:24,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:34:24,301 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-07-27 01:34:24,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:34:24,397 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-07-27 01:34:26,197 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:34:26,384 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:34:26,461 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-07-27 01:34:26,461 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-07-27 01:34:26,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:34:26,641 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-07-27 01:34:26,672 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:34:26,687 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-07-27 01:34:27,022 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:34:27,022 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-07-27 01:34:27,058 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-27 01:34:27,059 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-27 01:34:27,095 [ scc.git] DEBUG Calling 'git reset --hard 68077e467bddc6bdebb5699f89e48ce42290a18d' 2026-07-27 01:34:27,319 [ scc.git] DEBUG HEAD is now at 68077e4 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-07-27 01:34:27,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:34:27,501 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-07-27 01:34:27,546 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-07-27 01:34:27,572 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#20](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-07-27 01:34:27,598 [ scc.config] DEBUG Found github.token 2026-07-27 01:34:27,598 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-07-27 01:34:27,598 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-07-27 01:34:27,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:34:27,675 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-07-27 01:34:27,979 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:34:28,323 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:34:28,455 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-07-27 01:34:28,455 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-07-27 01:34:28,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:34:28,652 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-07-27 01:34:28,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:34:28,711 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-07-27 01:34:28,971 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:34:29,361 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:34:29,609 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-07-27 01:34:29,609 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-07-27 01:34:29,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:34:29,826 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-07-27 01:34:29,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:34:29,994 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-07-27 01:34:31,518 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:34:31,518 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-07-27 01:34:31,585 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-27 01:34:31,586 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-27 01:34:31,621 [ scc.git] DEBUG Calling 'git reset --hard 82566eeef3adf6591df1e4cafb02b92200262369' 2026-07-27 01:34:31,918 [ scc.git] DEBUG HEAD is now at 82566ee merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-07-27 01:34:32,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:34:32,115 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-07-27 01:34:32,147 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-07-27 01:34:32,176 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#20](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-07-27 01:34:32,206 [ scc.config] DEBUG Found github.token 2026-07-27 01:34:32,207 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-07-27 01:34:32,207 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-07-27 01:34:32,231 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:34:32,255 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-07-27 01:34:32,562 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:34:32,563 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-07-27 01:34:32,603 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-27 01:34:32,604 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-27 01:34:32,634 [ scc.git] DEBUG Calling 'git reset --hard 82566eeef3adf6591df1e4cafb02b92200262369' 2026-07-27 01:34:32,895 [ scc.git] DEBUG HEAD is now at 82566ee merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-07-27 01:34:33,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:34:33,127 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-07-27 01:34:33,173 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-07-27 01:34:33,193 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#20](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-07-27 01:34:33,238 [ scc.config] DEBUG Found github.token 2026-07-27 01:34:33,238 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-07-27 01:34:33,238 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:34:33,380 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:34:33,380 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:34:33,413 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:34:33,542 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:34:33,735 [ scc.git] DEBUG has no local changes 2026-07-27 01:34:33,735 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:34:33,895 [ scc.git] DEBUG [detached HEAD 0eec7dc] merge master -Dorg -Ssuccess-only 2026-07-27 01:34:33,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:34:33,897 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:34:34,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-07-27 01:34:34,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/549 HTTP/1.1" 200 None 2026-07-27 01:34:35,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/549/comments HTTP/1.1" 200 None 2026-07-27 01:34:35,528 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:34:36,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b5d7408bab9f44fa85ebec4a91f70b73ea8a4383?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:36,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b5d7408bab9f44fa85ebec4a91f70b73ea8a4383/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:34:37,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b5d7408bab9f44fa85ebec4a91f70b73ea8a4383/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:34:37,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b5d7408bab9f44fa85ebec4a91f70b73ea8a4383?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:38,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b5d7408bab9f44fa85ebec4a91f70b73ea8a4383?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:34:38,249 [ scc.repo] DEBUG - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.10.0' 2026-07-27 01:34:38,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/548 HTTP/1.1" 200 None 2026-07-27 01:34:38,722 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:34:39,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ab4cf7a5a58a2212a334d5cb33c387a8bbdced88?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:39,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ab4cf7a5a58a2212a334d5cb33c387a8bbdced88/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:34:40,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ab4cf7a5a58a2212a334d5cb33c387a8bbdced88/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:34:40,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ab4cf7a5a58a2212a334d5cb33c387a8bbdced88?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:41,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ab4cf7a5a58a2212a334d5cb33c387a8bbdced88?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:34:41,341 [ scc.repo] DEBUG - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' 2026-07-27 01:34:41,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/547 HTTP/1.1" 200 None 2026-07-27 01:34:41,857 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:34:42,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b277691395fa5c2b16c02f49deb9a5244ea6e56a?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:43,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b277691395fa5c2b16c02f49deb9a5244ea6e56a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:34:43,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b277691395fa5c2b16c02f49deb9a5244ea6e56a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:34:44,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b277691395fa5c2b16c02f49deb9a5244ea6e56a?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:44,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b277691395fa5c2b16c02f49deb9a5244ea6e56a?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:34:44,598 [ scc.repo] DEBUG - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' 2026-07-27 01:34:45,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/546 HTTP/1.1" 200 None 2026-07-27 01:34:45,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:46,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:34:46,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:34:47,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:47,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:34:47,851 [ scc.repo] DEBUG - PR 546 will-moore 'Use POST data for saveImgRdef params' 2026-07-27 01:34:48,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/544 HTTP/1.1" 200 None 2026-07-27 01:34:48,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/544/comments HTTP/1.1" 200 None 2026-07-27 01:34:48,815 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:34:49,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b9d6befc6684104960c2906702c2eb687dc1e851?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:49,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b9d6befc6684104960c2906702c2eb687dc1e851/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:34:50,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b9d6befc6684104960c2906702c2eb687dc1e851/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:34:50,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b9d6befc6684104960c2906702c2eb687dc1e851?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:51,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b9d6befc6684104960c2906702c2eb687dc1e851?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:34:51,471 [ scc.repo] DEBUG - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint' 2026-07-27 01:34:51,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/543 HTTP/1.1" 200 None 2026-07-27 01:34:51,998 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:34:52,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/94c91a556df29d493ef65c47a023f6de724c0004?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:53,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/94c91a556df29d493ef65c47a023f6de724c0004/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:34:53,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/94c91a556df29d493ef65c47a023f6de724c0004/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:34:54,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/94c91a556df29d493ef65c47a023f6de724c0004?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:54,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/94c91a556df29d493ef65c47a023f6de724c0004?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:34:54,851 [ scc.repo] DEBUG - PR 543 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.5' 2026-07-27 01:34:55,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/541 HTTP/1.1" 200 None 2026-07-27 01:34:55,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/83cb921ccbf7bc394ef317de7cb767468ae7eaad?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:56,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/83cb921ccbf7bc394ef317de7cb767468ae7eaad/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:34:56,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/83cb921ccbf7bc394ef317de7cb767468ae7eaad/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:34:57,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/83cb921ccbf7bc394ef317de7cb767468ae7eaad?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:57,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/83cb921ccbf7bc394ef317de7cb767468ae7eaad?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:34:57,940 [ scc.repo] DEBUG - PR 541 will-moore 'Only add channel to tile request string if active' 2026-07-27 01:34:58,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/540 HTTP/1.1" 200 None 2026-07-27 01:34:58,415 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:34:59,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c568a324264b0d49ff3d53f75024eca7482de94b?page=1 HTTP/1.1" 200 None 2026-07-27 01:34:59,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c568a324264b0d49ff3d53f75024eca7482de94b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:35:00,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c568a324264b0d49ff3d53f75024eca7482de94b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:35:00,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c568a324264b0d49ff3d53f75024eca7482de94b?page=1 HTTP/1.1" 200 None 2026-07-27 01:35:01,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/c568a324264b0d49ff3d53f75024eca7482de94b?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:35:01,105 [ scc.repo] DEBUG - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' 2026-07-27 01:35:01,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/539 HTTP/1.1" 200 None 2026-07-27 01:35:01,594 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:35:02,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0f0014ac7a6b5a5423c4d298541516407fd6d3cb?page=1 HTTP/1.1" 200 None 2026-07-27 01:35:02,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0f0014ac7a6b5a5423c4d298541516407fd6d3cb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:35:03,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0f0014ac7a6b5a5423c4d298541516407fd6d3cb/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:35:03,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0f0014ac7a6b5a5423c4d298541516407fd6d3cb?page=1 HTTP/1.1" 200 None 2026-07-27 01:35:04,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/0f0014ac7a6b5a5423c4d298541516407fd6d3cb?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:35:04,267 [ scc.repo] DEBUG - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-07-27 01:35:04,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/537 HTTP/1.1" 200 None 2026-07-27 01:35:04,733 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:35:05,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/16a64815dd14cc424f6ac8b24630b37ccfd0c282?page=1 HTTP/1.1" 200 None 2026-07-27 01:35:05,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/16a64815dd14cc424f6ac8b24630b37ccfd0c282/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:35:06,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/16a64815dd14cc424f6ac8b24630b37ccfd0c282/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:35:06,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/16a64815dd14cc424f6ac8b24630b37ccfd0c282?page=1 HTTP/1.1" 200 None 2026-07-27 01:35:07,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/16a64815dd14cc424f6ac8b24630b37ccfd0c282?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:35:07,409 [ scc.repo] DEBUG - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' 2026-07-27 01:35:07,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/535 HTTP/1.1" 200 None 2026-07-27 01:35:08,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/535/comments HTTP/1.1" 200 None 2026-07-27 01:35:08,419 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:35:09,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79?page=1 HTTP/1.1" 200 None 2026-07-27 01:35:09,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:35:10,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:35:10,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79?page=1 HTTP/1.1" 200 None 2026-07-27 01:35:11,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/46500d0a497fc9945eeca87fd36672b2bf8d6e79?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:35:11,257 [ scc.repo] DEBUG - PR 535 dependabot[bot] 'Bump tmp and eslint' 2026-07-27 01:35:11,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532 HTTP/1.1" 200 None 2026-07-27 01:35:12,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532/comments HTTP/1.1" 200 None 2026-07-27 01:35:12,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-07-27 01:35:13,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:35:13,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:35:14,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-07-27 01:35:15,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:35:15,019 [ scc.repo] DEBUG - PR 532 will-moore 'Zarr layers' 2026-07-27 01:35:15,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/527 HTTP/1.1" 200 None 2026-07-27 01:35:16,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/527/comments HTTP/1.1" 200 None 2026-07-27 01:35:16,031 [ scc.repo] DEBUG # ... Include label: include 2026-07-27 01:35:16,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f4674bc0a542677ce0acc3fbb6d7ce3f990b47f7?page=1 HTTP/1.1" 200 None 2026-07-27 01:35:17,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f4674bc0a542677ce0acc3fbb6d7ce3f990b47f7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:35:17,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f4674bc0a542677ce0acc3fbb6d7ce3f990b47f7/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:35:18,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f4674bc0a542677ce0acc3fbb6d7ce3f990b47f7?page=1 HTTP/1.1" 200 None 2026-07-27 01:35:18,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/f4674bc0a542677ce0acc3fbb6d7ce3f990b47f7?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:35:18,839 [ scc.repo] DEBUG - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-07-27 01:35:19,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-07-27 01:35:19,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511/comments HTTP/1.1" 200 None 2026-07-27 01:35:20,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-07-27 01:35:20,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-07-27 01:35:21,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-07-27 01:35:21,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-07-27 01:35:22,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-07-27 01:35:22,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-07-27 01:35:23,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:35:23,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-07-27 01:35:24,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:35:24,290 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-07-27 01:35:24,290 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:35:24,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-07-27 01:35:24,291 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:35:24,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:35:24,311 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:35:24,336 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:35:24,336 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:35:24,396 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:35:24,975 [ scc.git] DEBUG Updating 7a798cee..cae0b026 2026-07-27 01:35:25,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/534 HTTP/1.1" 200 None 2026-07-27 01:35:26,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/533 HTTP/1.1" 200 None 2026-07-27 01:35:27,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/530 HTTP/1.1" 200 None 2026-07-27 01:35:27,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/528 HTTP/1.1" 200 None 2026-07-27 01:35:28,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/529 HTTP/1.1" 200 None 2026-07-27 01:35:29,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/526 HTTP/1.1" 200 None 2026-07-27 01:35:30,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/525 HTTP/1.1" 200 None 2026-07-27 01:35:31,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/524 HTTP/1.1" 200 None 2026-07-27 01:35:31,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/523 HTTP/1.1" 200 None 2026-07-27 01:35:32,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/522 HTTP/1.1" 200 None 2026-07-27 01:35:33,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/521 HTTP/1.1" 200 None 2026-07-27 01:35:34,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/520 HTTP/1.1" 200 None 2026-07-27 01:35:35,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/519 HTTP/1.1" 200 None 2026-07-27 01:35:35,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/518 HTTP/1.1" 200 None 2026-07-27 01:35:36,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/514 HTTP/1.1" 200 None 2026-07-27 01:35:37,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/513 HTTP/1.1" 200 None 2026-07-27 01:35:38,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/512 HTTP/1.1" 200 None 2026-07-27 01:35:39,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/465 HTTP/1.1" 200 None 2026-07-27 01:35:39,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/517 HTTP/1.1" 200 None 2026-07-27 01:35:40,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/516 HTTP/1.1" 200 None 2026-07-27 01:35:41,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-07-27 01:35:42,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-07-27 01:35:42,136 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-07-27 01:35:42,692 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-27 01:35:42,693 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-07-27 01:35:42,719 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2026-07-27 01:35:48,811 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-27 01:35:48,811 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2026-07-27 01:35:48,833 [ scc.git] DEBUG Calling 'git fetch origin pull/532/head' 2026-07-27 01:35:49,298 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-27 01:35:49,298 [ scc.git] DEBUG * branch refs/pull/532/head -> FETCH_HEAD 2026-07-27 01:35:49,324 [ scc.git] DEBUG Calling 'git fetch origin pull/535/head' 2026-07-27 01:35:49,758 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-27 01:35:49,759 [ scc.git] DEBUG * branch refs/pull/535/head -> FETCH_HEAD 2026-07-27 01:35:49,789 [ scc.git] DEBUG Calling 'git fetch origin pull/537/head' 2026-07-27 01:35:50,226 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-27 01:35:50,226 [ scc.git] DEBUG * branch refs/pull/537/head -> FETCH_HEAD 2026-07-27 01:35:50,252 [ scc.git] DEBUG Calling 'git fetch origin pull/539/head' 2026-07-27 01:35:50,693 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-27 01:35:50,693 [ scc.git] DEBUG * branch refs/pull/539/head -> FETCH_HEAD 2026-07-27 01:35:50,715 [ scc.git] DEBUG Calling 'git fetch origin pull/540/head' 2026-07-27 01:35:51,120 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-27 01:35:51,120 [ scc.git] DEBUG * branch refs/pull/540/head -> FETCH_HEAD 2026-07-27 01:35:51,143 [ scc.git] DEBUG Calling 'git fetch origin pull/541/head' 2026-07-27 01:35:51,598 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-27 01:35:51,598 [ scc.git] DEBUG * branch refs/pull/541/head -> FETCH_HEAD 2026-07-27 01:35:51,622 [ scc.git] DEBUG Calling 'git fetch origin pull/543/head' 2026-07-27 01:35:52,052 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-27 01:35:52,052 [ scc.git] DEBUG * branch refs/pull/543/head -> FETCH_HEAD 2026-07-27 01:35:52,076 [ scc.git] DEBUG Calling 'git fetch origin pull/544/head' 2026-07-27 01:35:52,492 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-27 01:35:52,492 [ scc.git] DEBUG * branch refs/pull/544/head -> FETCH_HEAD 2026-07-27 01:35:52,516 [ scc.git] DEBUG Calling 'git fetch origin pull/546/head' 2026-07-27 01:35:53,012 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-27 01:35:53,012 [ scc.git] DEBUG * branch refs/pull/546/head -> FETCH_HEAD 2026-07-27 01:35:53,040 [ scc.git] DEBUG Calling 'git fetch origin pull/547/head' 2026-07-27 01:35:53,471 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-27 01:35:53,471 [ scc.git] DEBUG * branch refs/pull/547/head -> FETCH_HEAD 2026-07-27 01:35:53,495 [ scc.git] DEBUG Calling 'git fetch origin pull/548/head' 2026-07-27 01:35:53,914 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-27 01:35:53,914 [ scc.git] DEBUG * branch refs/pull/548/head -> FETCH_HEAD 2026-07-27 01:35:53,944 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2026-07-27 01:35:55,930 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-27 01:35:55,930 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2026-07-27 01:35:55,951 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:35:55,951 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:35:55,951 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:35:55,964 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-07-27 01:35:55,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:35:56,006 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-07-27 01:35:57,043 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-07-27 01:35:57,156 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:35:57,216 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-07-27 01:35:57,216 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-07-27 01:35:57,216 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-07-27 01:35:57,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:35:57,422 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f4674bc0a542677ce0acc3fbb6d7ce3f990b47f7' 2026-07-27 01:35:57,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:35:57,514 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add grid overlay feature with configurable cell size and labels) f4674bc0a542677ce0acc3fbb6d7ce3f990b47f7' 2026-07-27 01:35:57,922 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-07-27 01:35:58,003 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:35:58,093 [ scc.git] DEBUG css/app.css | 321 +++++++++++++++++++++++++++++++++++- 2026-07-27 01:35:58,093 [ scc.git] DEBUG src/model/image_config.js | 2 +- 2026-07-27 01:35:58,093 [ scc.git] DEBUG src/viewers/ol3-viewer.html | 0 2026-07-27 01:35:58,093 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 0 2026-07-27 01:35:58,093 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 4 + 2026-07-27 01:35:58,093 [ scc.git] DEBUG src/viewers/viewer/controls/Grid.js | 295 +++++++++++++++++++++++++++++++++ 2026-07-27 01:35:58,093 [ scc.git] DEBUG src/viewers/viewer/globals.js | 8 + 2026-07-27 01:35:58,093 [ scc.git] DEBUG src/viewers/viewer/grid-overlay.js | 242 +++++++++++++++++++++++++++ 2026-07-27 01:35:58,093 [ scc.git] DEBUG 8 files changed, 870 insertions(+), 2 deletions(-) 2026-07-27 01:35:58,093 [ scc.git] DEBUG mode change 100644 => 100755 css/app.css 2026-07-27 01:35:58,093 [ scc.git] DEBUG mode change 100644 => 100755 src/viewers/ol3-viewer.html 2026-07-27 01:35:58,093 [ scc.git] DEBUG mode change 100644 => 100755 src/viewers/ol3-viewer.js 2026-07-27 01:35:58,093 [ scc.git] DEBUG create mode 100644 src/viewers/viewer/controls/Grid.js 2026-07-27 01:35:58,093 [ scc.git] DEBUG create mode 100755 src/viewers/viewer/grid-overlay.js 2026-07-27 01:35:58,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:35:58,288 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-07-27 01:35:58,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:35:58,362 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 532 (Zarr layers) fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-07-27 01:35:59,319 [ scc.git] DEBUG Auto-merging css/app.css 2026-07-27 01:35:59,319 [ scc.git] DEBUG CONFLICT (content): Merge conflict in css/app.css 2026-07-27 01:35:59,319 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:35:59,319 [ scc.git] DEBUG Auto-merging package.json 2026-07-27 01:35:59,319 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-07-27 01:35:59,320 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-07-27 01:35:59,320 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-07-27 01:35:59,320 [ scc.git] DEBUG Auto-merging webpack.dev.config.js 2026-07-27 01:35:59,349 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-27 01:35:59,353 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-27 01:35:59,444 [ scc.git] DEBUG Calling 'git reset --hard a1a48b45ee95db838d6608760c5718f487df4242' 2026-07-27 01:35:59,917 [ scc.git] DEBUG HEAD is now at a1a48b45 merge master -Dorg -Ssuccess-only: PR 527 (Add grid overlay feature with configurable cell size and labels) 2026-07-27 01:36:00,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:00,099 [ scc.git] DEBUG Calling 'git merge-base cae0b0260125ca856c05b4ac7d723879827a6e76 fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-07-27 01:36:00,133 [ scc.git] DEBUG Calling 'git diff --name-only 0b7eaf71f7e3f5c7289fab4bf857094bdadce1e4..cae0b0260125ca856c05b4ac7d723879827a6e76' 2026-07-27 01:36:00,158 [ scc.git] INFO - PR 532 will-moore 'Zarr layers' Conflicting PR. Removed from build [OMERO-plugins-push#20](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/consoleText) for more details. Possible conflicts: - PR #527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - css/app.css --conflicts 2026-07-27 01:36:00,170 [ scc.config] DEBUG Found github.token 2026-07-27 01:36:00,170 [ scc.git] DEBUG Not adding comment to issue #532, already --conflicts. 2026-07-27 01:36:00,170 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...46500d0a497fc9945eeca87fd36672b2bf8d6e79' 2026-07-27 01:36:00,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:00,239 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 535 (Bump tmp and eslint) 46500d0a497fc9945eeca87fd36672b2bf8d6e79' 2026-07-27 01:36:00,640 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:36:00,719 [ scc.git] DEBUG package-lock.json | 2238 +++++++++++++++++++++-------------------------------- 2026-07-27 01:36:00,719 [ scc.git] DEBUG package.json | 2 +- 2026-07-27 01:36:00,719 [ scc.git] DEBUG 2 files changed, 869 insertions(+), 1371 deletions(-) 2026-07-27 01:36:00,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:00,910 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16a64815dd14cc424f6ac8b24630b37ccfd0c282' 2026-07-27 01:36:00,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:00,984 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 537 (Bump launch-editor from 2.13.2 to 2.14.1) 16a64815dd14cc424f6ac8b24630b37ccfd0c282' 2026-07-27 01:36:01,228 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:36:01,304 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:36:01,398 [ scc.git] DEBUG package-lock.json | 28 ++++++++++++++-------------- 2026-07-27 01:36:01,398 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 14 deletions(-) 2026-07-27 01:36:01,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:01,582 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0f0014ac7a6b5a5423c4d298541516407fd6d3cb' 2026-07-27 01:36:01,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:01,664 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 539 (Bump ws, engine.io and socket.io-adapter) 0f0014ac7a6b5a5423c4d298541516407fd6d3cb' 2026-07-27 01:36:01,893 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:36:01,961 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:36:02,038 [ scc.git] DEBUG package-lock.json | 44 ++++++++++++++++++++++---------------------- 2026-07-27 01:36:02,038 [ scc.git] DEBUG 1 file changed, 22 insertions(+), 22 deletions(-) 2026-07-27 01:36:02,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:02,263 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c568a324264b0d49ff3d53f75024eca7482de94b' 2026-07-27 01:36:02,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:02,340 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 540 (Bump @babel/core from 7.5.4 to 7.29.6) c568a324264b0d49ff3d53f75024eca7482de94b' 2026-07-27 01:36:02,606 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:36:02,606 [ scc.git] DEBUG Auto-merging package.json 2026-07-27 01:36:02,679 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:36:02,758 [ scc.git] DEBUG package-lock.json | 667 +++++++++++++++++++++++++++++++----------------------- 2026-07-27 01:36:02,758 [ scc.git] DEBUG package.json | 2 +- 2026-07-27 01:36:02,758 [ scc.git] DEBUG 2 files changed, 389 insertions(+), 280 deletions(-) 2026-07-27 01:36:03,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:03,107 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...83cb921ccbf7bc394ef317de7cb767468ae7eaad' 2026-07-27 01:36:03,166 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:03,180 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 541 (Only add channel to tile request string if active) 83cb921ccbf7bc394ef317de7cb767468ae7eaad' 2026-07-27 01:36:03,513 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:36:03,597 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 49 ++++++++++++++++++++------------------ 2026-07-27 01:36:03,597 [ scc.git] DEBUG 1 file changed, 26 insertions(+), 23 deletions(-) 2026-07-27 01:36:03,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:03,794 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...94c91a556df29d493ef65c47a023f6de724c0004' 2026-07-27 01:36:03,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:03,870 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 543 (Bump webpack-dev-server from 5.2.4 to 5.2.5) 94c91a556df29d493ef65c47a023f6de724c0004' 2026-07-27 01:36:04,146 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:36:04,146 [ scc.git] DEBUG Auto-merging package.json 2026-07-27 01:36:04,224 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:36:04,315 [ scc.git] DEBUG package-lock.json | 14 +++++++------- 2026-07-27 01:36:04,315 [ scc.git] DEBUG package.json | 2 +- 2026-07-27 01:36:04,315 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 8 deletions(-) 2026-07-27 01:36:04,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:04,494 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b9d6befc6684104960c2906702c2eb687dc1e851' 2026-07-27 01:36:04,564 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:04,581 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 544 (Bump js-yaml, mocha and eslint) b9d6befc6684104960c2906702c2eb687dc1e851' 2026-07-27 01:36:04,871 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:36:04,871 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-07-27 01:36:04,871 [ scc.git] DEBUG Auto-merging package.json 2026-07-27 01:36:04,871 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package.json 2026-07-27 01:36:04,901 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-27 01:36:04,904 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-27 01:36:04,945 [ scc.git] DEBUG Calling 'git reset --hard dafa3986b628c799a60202f7bdb4ff729ef70ace' 2026-07-27 01:36:05,166 [ scc.git] DEBUG HEAD is now at dafa3986 merge master -Dorg -Ssuccess-only: PR 543 (Bump webpack-dev-server from 5.2.4 to 5.2.5) 2026-07-27 01:36:05,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:05,359 [ scc.git] DEBUG Calling 'git merge-base cae0b0260125ca856c05b4ac7d723879827a6e76 b9d6befc6684104960c2906702c2eb687dc1e851' 2026-07-27 01:36:05,389 [ scc.git] DEBUG Calling 'git diff --name-only cae0b0260125ca856c05b4ac7d723879827a6e76..cae0b0260125ca856c05b4ac7d723879827a6e76' 2026-07-27 01:36:05,414 [ scc.git] INFO - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint' Conflicting PR. Removed from build [OMERO-plugins-push#20](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/consoleText) for more details. Possible conflicts: - PR #532 will-moore 'Zarr layers' - package-lock.json - package.json - PR #535 dependabot[bot] 'Bump tmp and eslint' - package-lock.json - package.json - PR #537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - package-lock.json - PR #539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - package-lock.json - PR #540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - package-lock.json - package.json - PR #543 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.5' - package-lock.json - package.json --conflicts 2026-07-27 01:36:05,428 [ scc.config] DEBUG Found github.token 2026-07-27 01:36:05,428 [ scc.git] DEBUG Not adding comment to issue #544, already --conflicts. 2026-07-27 01:36:05,428 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf1523e8c6e3d91d8b862eb49a5b679caa796c78' 2026-07-27 01:36:05,488 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:05,505 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 546 (Use POST data for saveImgRdef params) cf1523e8c6e3d91d8b862eb49a5b679caa796c78' 2026-07-27 01:36:05,825 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-07-27 01:36:05,904 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:36:05,980 [ scc.git] DEBUG src/model/image_config.js | 7 ++++--- 2026-07-27 01:36:05,980 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 3 deletions(-) 2026-07-27 01:36:06,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:06,163 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b277691395fa5c2b16c02f49deb9a5244ea6e56a' 2026-07-27 01:36:06,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:06,269 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 547 (Bump websocket-driver from 0.7.4 to 0.7.5) b277691395fa5c2b16c02f49deb9a5244ea6e56a' 2026-07-27 01:36:06,551 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:36:06,646 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:36:06,733 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-07-27 01:36:06,734 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-07-27 01:36:06,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:06,931 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ab4cf7a5a58a2212a334d5cb33c387a8bbdced88' 2026-07-27 01:36:07,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:07,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 548 (Bump fast-uri from 3.1.2 to 3.1.4) ab4cf7a5a58a2212a334d5cb33c387a8bbdced88' 2026-07-27 01:36:07,313 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:36:07,388 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:36:07,468 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-07-27 01:36:07,468 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-07-27 01:36:07,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:07,718 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b5d7408bab9f44fa85ebec4a91f70b73ea8a4383' 2026-07-27 01:36:07,796 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:07,810 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Bump shell-quote from 1.8.3 to 1.10.0) b5d7408bab9f44fa85ebec4a91f70b73ea8a4383' 2026-07-27 01:36:08,137 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:36:08,137 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-07-27 01:36:08,166 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-27 01:36:08,168 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-27 01:36:08,205 [ scc.git] DEBUG Calling 'git reset --hard 24ad5e5d11e887144a0611289a96b8c77dc45fdd' 2026-07-27 01:36:08,361 [ scc.git] DEBUG HEAD is now at 24ad5e5d merge master -Dorg -Ssuccess-only: PR 548 (Bump fast-uri from 3.1.2 to 3.1.4) 2026-07-27 01:36:08,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:08,556 [ scc.git] DEBUG Calling 'git merge-base cae0b0260125ca856c05b4ac7d723879827a6e76 b5d7408bab9f44fa85ebec4a91f70b73ea8a4383' 2026-07-27 01:36:08,582 [ scc.git] DEBUG Calling 'git diff --name-only cae0b0260125ca856c05b4ac7d723879827a6e76..cae0b0260125ca856c05b4ac7d723879827a6e76' 2026-07-27 01:36:08,602 [ scc.git] INFO - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.10.0' Conflicting PR. Removed from build [OMERO-plugins-push#20](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/consoleText) for more details. Possible conflicts: - PR #532 will-moore 'Zarr layers' - package-lock.json - PR #535 dependabot[bot] 'Bump tmp and eslint' - package-lock.json - PR #537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - package-lock.json - PR #539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - package-lock.json - PR #540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - package-lock.json - PR #543 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.5' - package-lock.json - PR #544 dependabot[bot] 'Bump js-yaml, mocha and eslint' - package-lock.json - PR #547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - package-lock.json - PR #548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - package-lock.json --conflicts 2026-07-27 01:36:08,612 [ scc.config] DEBUG Found github.token 2026-07-27 01:36:08,612 [ scc.git] DEBUG Not adding comment to issue #549, already --conflicts. 2026-07-27 01:36:08,612 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:36:08,716 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:36:08,716 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:08,728 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:36:08,831 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:36:08,919 [ scc.git] DEBUG has no local changes 2026-07-27 01:36:08,919 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..cae0b026 Previously merged: - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 541 will-moore 'Only add channel to tile request string if active' - PR 543 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.5' - PR 546 will-moore 'Use POST data for saveImgRdef params' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.10.0' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:36:09,075 [ scc.git] DEBUG [detached HEAD 3657c27b] merge master -Dorg -Ssuccess-only 2026-07-27 01:36:09,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:36:09,078 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:36:09,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-07-27 01:36:10,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-07-27 01:36:10,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-07-27 01:36:10,622 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:36:11,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:11,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:36:12,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:36:12,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:13,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:36:13,328 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:36:13,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-07-27 01:36:14,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:14,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:36:15,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:15,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:36:15,894 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-27 01:36:16,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-07-27 01:36:16,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-07-27 01:36:17,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:17,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:36:18,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:18,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:36:18,881 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-07-27 01:36:18,881 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:36:18,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-07-27 01:36:18,882 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:36:18,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:18,902 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:36:18,921 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:36:18,921 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:36:18,942 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:36:19,037 [ scc.git] DEBUG Already up to date. 2026-07-27 01:36:19,037 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-07-27 01:36:19,457 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-07-27 01:36:19,458 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-07-27 01:36:19,484 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-07-27 01:36:19,962 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-07-27 01:36:19,962 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-07-27 01:36:19,990 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-07-27 01:36:20,390 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-07-27 01:36:20,390 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-07-27 01:36:20,414 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:36:20,415 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:36:20,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:20,432 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-07-27 01:36:20,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:20,476 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-07-27 01:36:20,714 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:36:20,780 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-07-27 01:36:20,780 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-07-27 01:36:20,780 [ scc.git] DEBUG requirements.txt | 2 +- 2026-07-27 01:36:20,780 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-07-27 01:36:20,780 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-07-27 01:36:20,780 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-07-27 01:36:21,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:21,051 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-07-27 01:36:21,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:21,101 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-07-27 01:36:21,309 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:36:21,382 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-27 01:36:21,382 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-27 01:36:21,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:21,582 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-07-27 01:36:21,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:21,638 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-07-27 01:36:21,844 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-07-27 01:36:21,844 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-07-27 01:36:21,875 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-27 01:36:21,876 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-27 01:36:21,905 [ scc.git] DEBUG Calling 'git reset --hard 4eb1a9058e80b8bc328a35ee2ccfad8188374009' 2026-07-27 01:36:22,051 [ scc.git] DEBUG HEAD is now at 4eb1a90 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-07-27 01:36:22,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:22,242 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-07-27 01:36:22,261 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-07-27 01:36:22,280 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#20](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-07-27 01:36:22,292 [ scc.config] DEBUG Found github.token 2026-07-27 01:36:22,292 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-07-27 01:36:22,292 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:36:22,400 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:36:22,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:22,414 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:36:22,529 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:36:22,601 [ scc.git] DEBUG has no local changes 2026-07-27 01:36:22,601 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:36:22,748 [ scc.git] DEBUG [detached HEAD 58c2ade] merge master -Dorg -Ssuccess-only 2026-07-27 01:36:22,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:36:22,751 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:36:23,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-07-27 01:36:23,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-07-27 01:36:24,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-07-27 01:36:24,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:25,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:36:25,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:26,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:36:26,096 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-07-27 01:36:26,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-07-27 01:36:27,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-07-27 01:36:27,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:28,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:36:28,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:29,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:36:29,104 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-07-27 01:36:29,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-07-27 01:36:30,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-07-27 01:36:30,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:31,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:36:31,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:32,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:36:32,376 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-07-27 01:36:32,376 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:36:32,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-07-27 01:36:32,377 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:36:32,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:32,398 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:36:32,416 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:36:32,416 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:36:32,438 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:36:32,581 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-07-27 01:36:33,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-07-27 01:36:33,282 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-07-27 01:36:33,874 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-07-27 01:36:33,874 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-07-27 01:36:33,898 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-07-27 01:36:34,576 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-07-27 01:36:34,576 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-07-27 01:36:34,602 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-07-27 01:36:35,016 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-07-27 01:36:35,016 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-07-27 01:36:35,042 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:36:35,042 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:36:35,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:35,058 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-07-27 01:36:35,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:35,109 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-07-27 01:36:35,361 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-07-27 01:36:35,361 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-07-27 01:36:35,361 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-07-27 01:36:35,361 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-07-27 01:36:35,384 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-27 01:36:35,385 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-27 01:36:35,407 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-07-27 01:36:35,541 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-07-27 01:36:35,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:35,729 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-07-27 01:36:35,761 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-07-27 01:36:35,778 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#20](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2026-07-27 01:36:35,788 [ scc.config] DEBUG Found github.token 2026-07-27 01:36:35,788 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-07-27 01:36:35,788 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-07-27 01:36:35,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:35,840 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-07-27 01:36:36,061 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-07-27 01:36:36,061 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-07-27 01:36:36,061 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-07-27 01:36:36,082 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-27 01:36:36,084 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-27 01:36:36,113 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-07-27 01:36:36,259 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-07-27 01:36:36,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:36,451 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-07-27 01:36:36,492 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-07-27 01:36:36,514 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#20](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-07-27 01:36:36,528 [ scc.config] DEBUG Found github.token 2026-07-27 01:36:36,528 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-07-27 01:36:36,528 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-07-27 01:36:36,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:36,572 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-07-27 01:36:36,755 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:36:36,817 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-07-27 01:36:36,817 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-07-27 01:36:37,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:37,010 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:36:37,132 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:36:37,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:37,145 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:36:37,242 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:36:37,303 [ scc.git] DEBUG has no local changes 2026-07-27 01:36:37,303 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:36:37,453 [ scc.git] DEBUG [detached HEAD 88ef6a9] merge master -Dorg -Ssuccess-only 2026-07-27 01:36:37,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:36:37,455 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:36:37,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-07-27 01:36:38,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-07-27 01:36:39,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:39,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:36:40,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:40,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:36:40,534 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-27 01:36:41,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-07-27 01:36:41,056 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:36:41,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:42,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:36:42,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:43,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:36:43,207 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-07-27 01:36:43,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-07-27 01:36:43,699 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:36:44,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:44,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:36:45,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:45,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:36:45,952 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-07-27 01:36:46,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-07-27 01:36:46,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-07-27 01:36:47,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-07-27 01:36:47,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-07-27 01:36:48,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-07-27 01:36:48,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-07-27 01:36:49,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-07-27 01:36:49,348 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:36:49,348 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-07-27 01:36:49,350 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:36:49,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:49,372 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:36:49,390 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:36:49,390 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:36:49,409 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:36:49,471 [ scc.git] DEBUG Already up to date. 2026-07-27 01:36:49,471 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-07-27 01:36:49,926 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-07-27 01:36:49,927 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-07-27 01:36:49,952 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-07-27 01:36:50,349 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-07-27 01:36:50,349 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-07-27 01:36:50,371 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-07-27 01:36:50,797 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-07-27 01:36:50,797 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-07-27 01:36:50,820 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:36:50,820 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:36:50,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:50,835 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-07-27 01:36:50,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:50,867 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-07-27 01:36:51,176 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:36:51,249 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-07-27 01:36:51,249 [ scc.git] DEBUG package.json | 2 +- 2026-07-27 01:36:51,249 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-07-27 01:36:51,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:51,430 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-07-27 01:36:51,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:51,474 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-07-27 01:36:51,671 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-27 01:36:51,671 [ scc.git] DEBUG Auto-merging package.json 2026-07-27 01:36:51,746 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:36:51,817 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-07-27 01:36:51,817 [ scc.git] DEBUG package.json | 2 +- 2026-07-27 01:36:51,817 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-07-27 01:36:52,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:52,030 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-07-27 01:36:52,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:52,088 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-07-27 01:36:52,315 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:36:52,393 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-27 01:36:52,393 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-27 01:36:52,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:52,569 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:36:52,681 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:36:52,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:52,697 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:36:52,816 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:36:52,890 [ scc.git] DEBUG has no local changes 2026-07-27 01:36:52,890 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:36:53,053 [ scc.git] DEBUG [detached HEAD f47fc2e] merge master -Dorg -Ssuccess-only 2026-07-27 01:36:53,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:36:53,054 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:36:53,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-07-27 01:36:53,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-07-27 01:36:53,972 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:36:54,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:55,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:36:55,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:36:56,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-07-27 01:36:56,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:36:56,700 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:36:56,700 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:36:56,700 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-07-27 01:36:56,701 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:36:56,701 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:56,722 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:36:56,743 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:36:56,743 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:36:56,765 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:36:56,829 [ scc.git] DEBUG Already up to date. 2026-07-27 01:36:56,829 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-07-27 01:36:57,275 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-07-27 01:36:57,275 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-07-27 01:36:57,303 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:36:57,303 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:36:57,303 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:57,319 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-07-27 01:36:57,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:57,358 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-07-27 01:36:57,556 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:36:57,635 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-27 01:36:57,635 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-27 01:36:57,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:36:57,820 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:36:57,961 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:36:57,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:57,978 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:36:58,078 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:36:58,125 [ scc.git] DEBUG has no local changes 2026-07-27 01:36:58,125 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:36:58,318 [ scc.git] DEBUG [detached HEAD 48ca445] merge master -Dorg -Ssuccess-only 2026-07-27 01:36:58,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:36:58,320 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:36:58,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-07-27 01:36:59,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-07-27 01:36:59,269 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:36:59,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-07-27 01:36:59,270 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:36:59,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:36:59,293 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:36:59,315 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:36:59,315 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:36:59,358 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:36:59,578 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-07-27 01:37:00,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-07-27 01:37:01,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-07-27 01:37:01,084 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:37:01,084 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:01,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:01,103 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:37:01,211 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:01,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:01,226 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:37:01,322 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:37:01,383 [ scc.git] DEBUG has no local changes 2026-07-27 01:37:01,383 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:37:01,524 [ scc.git] DEBUG [detached HEAD 48f212a] merge master -Dorg -Ssuccess-only 2026-07-27 01:37:01,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:37:01,526 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:37:01,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-07-27 01:37:02,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-07-27 01:37:02,405 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:37:03,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:03,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:37:04,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:37:04,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:05,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:37:05,012 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:37:05,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-07-27 01:37:06,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-07-27 01:37:06,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:07,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:37:07,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:08,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:37:08,235 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-07-27 01:37:08,235 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:37:08,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-07-27 01:37:08,237 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:08,237 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:08,257 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:37:08,273 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:37:08,273 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:37:08,291 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:37:08,357 [ scc.git] DEBUG Already up to date. 2026-07-27 01:37:08,357 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-07-27 01:37:08,955 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-07-27 01:37:08,955 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-07-27 01:37:08,983 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-07-27 01:37:09,376 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-07-27 01:37:09,376 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-07-27 01:37:09,398 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:37:09,398 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:09,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:09,411 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-07-27 01:37:09,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:09,450 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-07-27 01:37:09,736 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-07-27 01:37:09,737 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-07-27 01:37:09,737 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-07-27 01:37:09,737 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-07-27 01:37:09,737 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-07-27 01:37:09,737 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-07-27 01:37:09,737 [ scc.git] DEBUG Auto-merging setup.py 2026-07-27 01:37:09,737 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-07-27 01:37:09,759 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-27 01:37:09,761 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-27 01:37:09,796 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-07-27 01:37:09,962 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-07-27 01:37:10,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:37:10,140 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-07-27 01:37:10,169 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-07-27 01:37:10,188 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#20](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/urls.py - omero_signup/views.py - setup.py --conflicts 2026-07-27 01:37:10,200 [ scc.config] DEBUG Found github.token 2026-07-27 01:37:10,200 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-07-27 01:37:10,200 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-07-27 01:37:10,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:10,234 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-07-27 01:37:10,391 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:37:10,465 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-27 01:37:10,465 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-27 01:37:10,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:37:10,646 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:37:10,759 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:10,759 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:10,772 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:37:10,875 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:37:10,939 [ scc.git] DEBUG has no local changes 2026-07-27 01:37:10,939 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:37:11,065 [ scc.git] DEBUG [detached HEAD a2b9bb4] merge master -Dorg -Ssuccess-only 2026-07-27 01:37:11,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:37:11,067 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:37:11,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-07-27 01:37:11,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-07-27 01:37:12,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-07-27 01:37:12,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-07-27 01:37:13,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:14,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:37:14,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:14,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:37:14,965 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-07-27 01:37:14,965 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:37:14,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-07-27 01:37:14,966 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:14,966 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:14,984 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:37:15,000 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:37:15,000 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:37:15,020 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:37:15,185 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-07-27 01:37:15,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-07-27 01:37:16,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-07-27 01:37:17,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-07-27 01:37:17,552 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-07-27 01:37:18,046 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-07-27 01:37:18,046 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-07-27 01:37:18,075 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:37:18,075 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:18,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:18,091 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-07-27 01:37:18,123 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:18,137 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-07-27 01:37:18,342 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-07-27 01:37:18,423 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:37:18,512 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-07-27 01:37:18,512 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-07-27 01:37:18,512 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-07-27 01:37:18,512 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-07-27 01:37:18,512 [ scc.git] DEBUG ms/test | 2 ++ 2026-07-27 01:37:18,512 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-07-27 01:37:18,512 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-07-27 01:37:18,512 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-07-27 01:37:18,512 [ scc.git] DEBUG create mode 100755 ms/test 2026-07-27 01:37:18,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:37:18,731 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:37:18,857 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:18,858 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:18,872 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:37:18,975 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:37:19,049 [ scc.git] DEBUG has no local changes 2026-07-27 01:37:19,049 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:37:19,177 [ scc.git] DEBUG [detached HEAD 939db0e] merge master -Dorg -Ssuccess-only 2026-07-27 01:37:19,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:37:19,178 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:37:19,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-07-27 01:37:20,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-07-27 01:37:20,003 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:37:20,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:21,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:37:21,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:37:22,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:22,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:37:22,632 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:37:22,632 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:37:22,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-07-27 01:37:22,633 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:22,633 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:22,655 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:37:22,674 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:37:22,674 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:37:22,697 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:37:22,756 [ scc.git] DEBUG Already up to date. 2026-07-27 01:37:22,756 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-07-27 01:37:23,166 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-07-27 01:37:23,166 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-07-27 01:37:23,187 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:37:23,188 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:23,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:23,204 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-07-27 01:37:23,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:23,239 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-07-27 01:37:23,412 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:37:23,490 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-27 01:37:23,490 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-27 01:37:23,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:37:23,699 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:37:23,816 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:23,816 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:23,830 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:37:23,936 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:37:23,987 [ scc.git] DEBUG has no local changes 2026-07-27 01:37:23,987 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:37:24,122 [ scc.git] DEBUG [detached HEAD 6666d20] merge master -Dorg -Ssuccess-only 2026-07-27 01:37:24,124 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:37:24,124 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:37:24,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-07-27 01:37:24,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-07-27 01:37:24,890 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:37:25,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:26,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:37:26,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:37:27,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:27,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:37:27,581 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:37:27,581 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:37:27,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-07-27 01:37:27,582 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:27,582 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:27,601 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:37:27,619 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:37:27,619 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:37:27,644 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:37:27,814 [ scc.git] DEBUG Updating deab817..160d894 2026-07-27 01:37:28,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-07-27 01:37:28,816 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-07-27 01:37:29,241 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-07-27 01:37:29,241 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-07-27 01:37:29,269 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:37:29,269 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:29,269 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:29,288 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-07-27 01:37:29,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:29,330 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-07-27 01:37:29,595 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:37:29,677 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-27 01:37:29,677 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-27 01:37:29,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:37:29,874 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:37:30,001 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:30,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:30,016 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:37:30,132 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:37:30,195 [ scc.git] DEBUG has no local changes 2026-07-27 01:37:30,195 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:37:30,325 [ scc.git] DEBUG [detached HEAD 86f3924] merge master -Dorg -Ssuccess-only 2026-07-27 01:37:30,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:37:30,327 [ scc.git] INFO Overriding base-branch from master to main 2026-07-27 01:37:30,328 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:37:30,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-07-27 01:37:31,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-07-27 01:37:31,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-07-27 01:37:32,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:32,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:37:33,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:37:33,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:34,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:37:34,358 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-07-27 01:37:34,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-07-27 01:37:35,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-07-27 01:37:35,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-07-27 01:37:36,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:36,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:37:37,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:37,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:37:37,878 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-07-27 01:37:37,878 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:37:37,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-07-27 01:37:37,879 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:37,879 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:37,904 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-07-27 01:37:37,925 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:37:37,925 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-07-27 01:37:37,949 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-07-27 01:37:38,110 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-07-27 01:37:38,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-07-27 01:37:39,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-07-27 01:37:39,550 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-07-27 01:37:40,071 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-07-27 01:37:40,072 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-07-27 01:37:40,098 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-07-27 01:37:40,752 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-07-27 01:37:40,752 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-07-27 01:37:40,776 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:37:40,776 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:40,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:40,799 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-07-27 01:37:40,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:40,848 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-07-27 01:37:41,046 [ scc.git] DEBUG Auto-merging README.rst 2026-07-27 01:37:41,046 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-07-27 01:37:41,046 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-07-27 01:37:41,046 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-07-27 01:37:41,071 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-27 01:37:41,072 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-27 01:37:41,108 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-07-27 01:37:41,266 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-07-27 01:37:41,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:37:41,462 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-07-27 01:37:41,485 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-07-27 01:37:41,502 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#20](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-07-27 01:37:41,513 [ scc.config] DEBUG Found github.token 2026-07-27 01:37:41,513 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-07-27 01:37:41,513 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-07-27 01:37:41,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:41,563 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-07-27 01:37:41,764 [ scc.git] DEBUG Auto-merging README.rst 2026-07-27 01:37:41,765 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-07-27 01:37:41,831 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:37:41,901 [ scc.git] DEBUG README.rst | 3 + 2026-07-27 01:37:41,901 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-07-27 01:37:41,901 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-07-27 01:37:41,901 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-07-27 01:37:41,901 [ scc.git] DEBUG setup.py | 5 +- 2026-07-27 01:37:41,901 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-07-27 01:37:41,901 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-07-27 01:37:42,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:37:42,092 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:37:42,208 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:42,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:42,223 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:37:42,340 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:37:42,410 [ scc.git] DEBUG has no local changes 2026-07-27 01:37:42,410 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:37:42,542 [ scc.git] DEBUG [detached HEAD d96bf91] merge master -Dorg -Ssuccess-only 2026-07-27 01:37:42,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:37:42,544 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:37:42,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-07-27 01:37:43,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-07-27 01:37:43,316 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:37:43,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:44,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:37:44,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:37:45,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:45,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:37:45,975 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:37:45,975 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:37:45,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-07-27 01:37:45,976 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:45,976 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:45,997 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:37:46,015 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:37:46,015 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:37:46,036 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:37:46,098 [ scc.git] DEBUG Already up to date. 2026-07-27 01:37:46,098 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-07-27 01:37:46,516 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-07-27 01:37:46,516 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-07-27 01:37:46,573 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:37:46,573 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:46,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:46,589 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-07-27 01:37:46,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:46,625 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-07-27 01:37:46,810 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:37:46,890 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-27 01:37:46,890 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-27 01:37:47,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:37:47,079 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:37:47,202 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:47,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:47,217 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:37:47,316 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:37:47,370 [ scc.git] DEBUG has no local changes 2026-07-27 01:37:47,370 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:37:47,492 [ scc.git] DEBUG [detached HEAD d707a58] merge master -Dorg -Ssuccess-only 2026-07-27 01:37:47,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:37:47,494 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:37:47,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-07-27 01:37:48,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-07-27 01:37:48,267 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-27 01:37:49,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:49,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:37:50,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:37:50,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:51,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:37:51,231 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:37:51,231 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:37:51,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-07-27 01:37:51,232 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:51,232 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:51,260 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:37:51,280 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:37:51,280 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:37:51,304 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:37:51,362 [ scc.git] DEBUG Already up to date. 2026-07-27 01:37:51,362 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-07-27 01:37:51,803 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-07-27 01:37:51,804 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-07-27 01:37:51,828 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:37:51,828 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:51,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:51,846 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-07-27 01:37:51,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:51,885 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-07-27 01:37:52,123 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:37:52,197 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-27 01:37:52,197 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-27 01:37:52,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:37:52,394 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:37:52,502 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:52,502 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:52,516 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:37:52,630 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:37:52,687 [ scc.git] DEBUG has no local changes 2026-07-27 01:37:52,687 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:37:52,807 [ scc.git] DEBUG [detached HEAD 4a35cff] merge master -Dorg -Ssuccess-only 2026-07-27 01:37:52,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:37:52,809 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:37:53,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-07-27 01:37:53,033 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:37:53,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-07-27 01:37:53,034 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:53,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:53,056 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-27 01:37:53,077 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:37:53,077 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-27 01:37:53,101 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-27 01:37:53,164 [ scc.git] DEBUG Already up to date. 2026-07-27 01:37:53,164 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:37:53,164 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:53,164 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:53,181 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:37:53,305 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:53,305 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:53,321 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:37:53,437 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:37:53,547 [ scc.git] DEBUG has no local changes 2026-07-27 01:37:53,547 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:37:53,702 [ scc.git] DEBUG [detached HEAD 5939a42] merge master -Dorg -Ssuccess-only 2026-07-27 01:37:53,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:37:53,704 [ scc.git] INFO Overriding base-branch from master to develop 2026-07-27 01:37:53,704 [ scc.repo] DEBUG ## PRs found: 2026-07-27 01:37:54,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-07-27 01:37:54,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None 2026-07-27 01:37:54,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:55,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-27 01:37:55,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-27 01:37:56,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-07-27 01:37:56,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2 2026-07-27 01:37:56,889 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-07-27 01:37:56,889 [ scc.repo] DEBUG ## Branches found: 2026-07-27 01:37:56,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-07-27 01:37:56,890 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:37:56,890 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:37:56,911 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-07-27 01:37:56,940 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-27 01:37:56,940 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-07-27 01:37:56,980 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-07-27 01:37:57,278 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-07-27 01:37:57,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-07-27 01:37:58,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-07-27 01:37:59,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-07-27 01:38:00,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-07-27 01:38:00,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-07-27 01:38:01,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-07-27 01:38:02,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-07-27 01:38:02,788 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head' 2026-07-27 01:38:03,393 [ scc.git] DEBUG From https://github.com/ome/scripts 2026-07-27 01:38:03,393 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD 2026-07-27 01:38:03,416 [ scc.git] DEBUG ## Unique users: [] 2026-07-27 01:38:03,416 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:38:03,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:38:03,433 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f' 2026-07-27 01:38:03,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:38:03,485 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f' 2026-07-27 01:38:03,697 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-27 01:38:03,767 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++-- 2026-07-27 01:38:03,767 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2026-07-27 01:38:03,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:03,964 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-27 01:38:04,084 [ scc.git] DEBUG Get sha1 of %s 2026-07-27 01:38:04,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-27 01:38:04,096 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:38:04,198 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:38:04,260 [ scc.git] DEBUG has no local changes 2026-07-27 01:38:04,260 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:38:04,388 [ scc.git] DEBUG [detached HEAD 1c9d2e1] merge master -Dorg -Ssuccess-only 2026-07-27 01:38:04,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:04,389 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-27 01:38:04,610 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-07-27 01:38:04,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:04,825 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-07-27 01:38:04,833 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-07-27 01:38:05,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:05,260 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-07-27 01:38:05,269 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-07-27 01:38:05,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:05,698 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-07-27 01:38:05,706 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-07-27 01:38:06,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:06,143 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-07-27 01:38:06,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:06,641 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-07-27 01:38:06,649 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-07-27 01:38:07,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:07,104 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-07-27 01:38:07,111 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-07-27 01:38:07,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:07,562 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-07-27 01:38:07,569 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-07-27 01:38:08,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:08,067 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-07-27 01:38:08,075 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-07-27 01:38:08,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:08,525 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-07-27 01:38:08,533 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-07-27 01:38:08,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:08,973 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-07-27 01:38:08,980 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-07-27 01:38:09,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:09,673 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-07-27 01:38:09,681 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-07-27 01:38:10,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:10,258 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-07-27 01:38:10,266 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-07-27 01:38:10,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:10,711 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-07-27 01:38:11,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:11,161 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-07-27 01:38:11,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:11,602 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-07-27 01:38:11,611 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-07-27 01:38:12,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:12,052 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-07-27 01:38:12,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:12,493 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-07-27 01:38:12,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:12,947 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-07-27 01:38:12,956 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-07-27 01:38:13,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:13,375 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-07-27 01:38:13,384 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-07-27 01:38:13,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:13,973 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-07-27 01:38:13,981 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-07-27 01:38:14,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:14,422 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-07-27 01:38:14,430 [ scc.config] DEBUG Found submodule.scripts.url 2026-07-27 01:38:14,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-27 01:38:14,883 [ scc.config] DEBUG Found submodule.scripts.branch 2026-07-27 01:38:14,883 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-27 01:38:16,860 [ scc.git] DEBUG has local changes 2026-07-27 01:38:16,861 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' - PR 196 will-moore 'Storage options only if needed' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Updating 9cc36cde..18887279 Previously merged: - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 692 will-moore 'colorbar lut background fix' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..cae0b026 Previously merged: - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 541 will-moore 'Only add channel to tile request string if active' - PR 543 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.5' - PR 546 will-moore 'Use POST data for saveImgRdef params' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.10.0' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#20 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/20/)' 2026-07-27 01:38:17,410 [ scc.git] DEBUG [detached HEAD eb78263] merge master -Dorg -Ssuccess-only 2026-07-27 01:38:17,410 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-07-27 01:38:17,411 [ scc.merge] INFO Repository: ome/omero-plugins 2026-07-27 01:38:17,412 [ scc.merge] INFO Already up to date. 2026-07-27 01:38:17,412 [ scc.merge] INFO 2026-07-27 01:38:17,412 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-07-27 01:38:17,412 [ scc.merge] INFO 2026-07-27 01:38:17,412 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-07-27 01:38:17,412 [ scc.merge] INFO Already up to date. 2026-07-27 01:38:17,412 [ scc.merge] INFO 2026-07-27 01:38:17,412 [ scc.merge] INFO 2026-07-27 01:38:17,412 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-07-27 01:38:17,412 [ scc.merge] INFO Excluded PRs: 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-07-27 01:38:17,412 [ scc.merge] INFO Already up to date. 2026-07-27 01:38:17,412 [ scc.merge] INFO 2026-07-27 01:38:17,412 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:38:17,412 [ scc.merge] INFO 2026-07-27 01:38:17,412 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-07-27 01:38:17,412 [ scc.merge] INFO Excluded PRs: 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-07-27 01:38:17,412 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-07-27 01:38:17,412 [ scc.merge] INFO Previously merged: 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-07-27 01:38:17,412 [ scc.merge] INFO 2026-07-27 01:38:17,412 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-07-27 01:38:17,412 [ scc.merge] INFO 2026-07-27 01:38:17,412 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-07-27 01:38:17,412 [ scc.merge] INFO Excluded PRs: 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-07-27 01:38:17,412 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-07-27 01:38:17,412 [ scc.merge] INFO Previously merged: 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-07-27 01:38:17,412 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-27 01:38:17,413 [ scc.merge] INFO 2026-07-27 01:38:17,413 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 196 will-moore 'Storage options only if needed' 2026-07-27 01:38:17,413 [ scc.merge] INFO 2026-07-27 01:38:17,413 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-07-27 01:38:17,413 [ scc.merge] INFO 2026-07-27 01:38:17,413 [ scc.merge] INFO Repository: ome/omero-figure 2026-07-27 01:38:17,413 [ scc.merge] INFO Updating 9cc36cde..18887279 2026-07-27 01:38:17,413 [ scc.merge] INFO Previously merged: 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 691 dependabot[bot] 'Bump esbuild and vite' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 685 will-moore 'Fix static files links for release build' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 683 will-moore 'Add touch support for clicking on single panel' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 680 will-moore 'Use --pre install for export script in README' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 676 dependabot[bot] 'Bump picomatch' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-07-27 01:38:17,413 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-27 01:38:17,414 [ scc.merge] INFO 2026-07-27 01:38:17,414 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 692 will-moore 'colorbar lut background fix' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' 2026-07-27 01:38:17,414 [ scc.merge] INFO 2026-07-27 01:38:17,414 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-07-27 01:38:17,414 [ scc.merge] INFO Already up to date. 2026-07-27 01:38:17,414 [ scc.merge] INFO 2026-07-27 01:38:17,414 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:38:17,414 [ scc.merge] INFO 2026-07-27 01:38:17,414 [ scc.merge] INFO Repository: ome/omero-gallery 2026-07-27 01:38:17,414 [ scc.merge] INFO Already up to date. 2026-07-27 01:38:17,414 [ scc.merge] INFO 2026-07-27 01:38:17,414 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-07-27 01:38:17,414 [ scc.merge] INFO 2026-07-27 01:38:17,414 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-07-27 01:38:17,414 [ scc.merge] INFO 2026-07-27 01:38:17,414 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-07-27 01:38:17,414 [ scc.merge] INFO Excluded PRs: 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-07-27 01:38:17,414 [ scc.merge] INFO Updating 7a798cee..cae0b026 2026-07-27 01:38:17,414 [ scc.merge] INFO Previously merged: 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-07-27 01:38:17,414 [ scc.merge] INFO - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 529 will-moore 'Image id and roi id initial params' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 517 will-moore 'Fix roi link permissions' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-27 01:38:17,415 [ scc.merge] INFO 2026-07-27 01:38:17,415 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 535 dependabot[bot] 'Bump tmp and eslint' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 541 will-moore 'Only add channel to tile request string if active' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 543 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.5' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 546 will-moore 'Use POST data for saveImgRdef params' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' 2026-07-27 01:38:17,415 [ scc.merge] INFO 2026-07-27 01:38:17,415 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 532 will-moore 'Zarr layers' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.10.0' 2026-07-27 01:38:17,415 [ scc.merge] INFO 2026-07-27 01:38:17,415 [ scc.merge] INFO Repository: ome/omero-mapr 2026-07-27 01:38:17,415 [ scc.merge] INFO Excluded PRs: 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-07-27 01:38:17,415 [ scc.merge] INFO Already up to date. 2026-07-27 01:38:17,415 [ scc.merge] INFO 2026-07-27 01:38:17,415 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-27 01:38:17,415 [ scc.merge] INFO 2026-07-27 01:38:17,415 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:38:17,415 [ scc.merge] INFO 2026-07-27 01:38:17,415 [ scc.merge] INFO Repository: ome/omero-metadata 2026-07-27 01:38:17,415 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-07-27 01:38:17,415 [ scc.merge] INFO Previously merged: 2026-07-27 01:38:17,415 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-27 01:38:17,416 [ scc.merge] INFO 2026-07-27 01:38:17,416 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-07-27 01:38:17,416 [ scc.merge] INFO 2026-07-27 01:38:17,416 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-07-27 01:38:17,416 [ scc.merge] INFO 2026-07-27 01:38:17,416 [ scc.merge] INFO Repository: ome/omero-parade 2026-07-27 01:38:17,416 [ scc.merge] INFO Excluded PRs: 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-07-27 01:38:17,416 [ scc.merge] INFO Already up to date. 2026-07-27 01:38:17,416 [ scc.merge] INFO 2026-07-27 01:38:17,416 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-27 01:38:17,416 [ scc.merge] INFO 2026-07-27 01:38:17,416 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-07-27 01:38:17,416 [ scc.merge] INFO Already up to date. 2026-07-27 01:38:17,416 [ scc.merge] INFO 2026-07-27 01:38:17,416 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:38:17,416 [ scc.merge] INFO 2026-07-27 01:38:17,416 [ scc.merge] INFO Repository: ome/omero-rois 2026-07-27 01:38:17,416 [ scc.merge] INFO Excluded PRs: 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-07-27 01:38:17,416 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-07-27 01:38:17,416 [ scc.merge] INFO Previously merged: 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-07-27 01:38:17,416 [ scc.merge] INFO 2026-07-27 01:38:17,416 [ scc.merge] INFO 2026-07-27 01:38:17,416 [ scc.merge] INFO Repository: ome/omero-signup 2026-07-27 01:38:17,416 [ scc.merge] INFO Already up to date. 2026-07-27 01:38:17,416 [ scc.merge] INFO 2026-07-27 01:38:17,416 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:38:17,416 [ scc.merge] INFO 2026-07-27 01:38:17,416 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-07-27 01:38:17,416 [ scc.merge] INFO 2026-07-27 01:38:17,416 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-07-27 01:38:17,416 [ scc.merge] INFO Excluded PRs: 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-07-27 01:38:17,416 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-07-27 01:38:17,416 [ scc.merge] INFO Previously merged: 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-07-27 01:38:17,416 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-07-27 01:38:17,416 [ scc.merge] INFO 2026-07-27 01:38:17,417 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,417 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-07-27 01:38:17,417 [ scc.merge] INFO 2026-07-27 01:38:17,417 [ scc.merge] INFO Repository: ome/omero-upload 2026-07-27 01:38:17,417 [ scc.merge] INFO Already up to date. 2026-07-27 01:38:17,417 [ scc.merge] INFO 2026-07-27 01:38:17,417 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,417 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:38:17,417 [ scc.merge] INFO 2026-07-27 01:38:17,417 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-07-27 01:38:17,417 [ scc.merge] INFO Updating deab817..160d894 2026-07-27 01:38:17,417 [ scc.merge] INFO Previously merged: 2026-07-27 01:38:17,417 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-07-27 01:38:17,417 [ scc.merge] INFO 2026-07-27 01:38:17,417 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,417 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:38:17,417 [ scc.merge] INFO 2026-07-27 01:38:17,417 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-07-27 01:38:17,417 [ scc.merge] INFO Excluded PRs: 2026-07-27 01:38:17,417 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-07-27 01:38:17,417 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-07-27 01:38:17,417 [ scc.merge] INFO Previously merged: 2026-07-27 01:38:17,417 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-07-27 01:38:17,417 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-07-27 01:38:17,417 [ scc.merge] INFO 2026-07-27 01:38:17,417 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,417 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-07-27 01:38:17,417 [ scc.merge] INFO 2026-07-27 01:38:17,417 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-27 01:38:17,417 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-07-27 01:38:17,417 [ scc.merge] INFO 2026-07-27 01:38:17,417 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-07-27 01:38:17,417 [ scc.merge] INFO Already up to date. 2026-07-27 01:38:17,417 [ scc.merge] INFO 2026-07-27 01:38:17,417 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,417 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:38:17,417 [ scc.merge] INFO 2026-07-27 01:38:17,417 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-07-27 01:38:17,417 [ scc.merge] INFO Already up to date. 2026-07-27 01:38:17,417 [ scc.merge] INFO 2026-07-27 01:38:17,417 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,417 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-27 01:38:17,417 [ scc.merge] INFO 2026-07-27 01:38:17,417 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-07-27 01:38:17,417 [ scc.merge] INFO Already up to date. 2026-07-27 01:38:17,417 [ scc.merge] INFO 2026-07-27 01:38:17,417 [ scc.merge] INFO 2026-07-27 01:38:17,417 [ scc.merge] INFO Repository: ome/scripts 2026-07-27 01:38:17,417 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-07-27 01:38:17,417 [ scc.merge] INFO Previously merged: 2026-07-27 01:38:17,417 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-07-27 01:38:17,417 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-07-27 01:38:17,417 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-07-27 01:38:17,417 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-07-27 01:38:17,418 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-07-27 01:38:17,418 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-07-27 01:38:17,418 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-07-27 01:38:17,418 [ scc.merge] INFO 2026-07-27 01:38:17,418 [ scc.merge] INFO Merged PRs: 2026-07-27 01:38:17,418 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-07-27 01:38:17,418 [ scc.merge] INFO 2026-07-27 01:38:17,418 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-07-27 01:38:17,418 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,431 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-07-27 01:38:17,431 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-07-27 01:38:17,444 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-07-27 01:38:17,456 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-07-27 01:38:17,472 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-07-27 01:38:17,487 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-07-27 01:38:17,503 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-07-27 01:38:17,518 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-07-27 01:38:17,534 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-07-27 01:38:17,549 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-07-27 01:38:17,564 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-07-27 01:38:17,580 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-07-27 01:38:17,594 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-07-27 01:38:17,609 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-07-27 01:38:17,624 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-07-27 01:38:17,641 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-07-27 01:38:17,656 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,671 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,671 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-07-27 01:38:17,671 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-07-27 01:38:17,685 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,700 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,700 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-07-27 01:38:17,700 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-07-27 01:38:17,714 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-07-27 01:38:17,729 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-27 01:38:17,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-07-27 01:38:17,743 [ scc.git] DEBUG Calling 'git remote' 2026-07-27 01:38:17,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.11.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 2cd9c43] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798cee nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 90ffc13] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-07-27 01:39:29,520 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-07-27 01:39:39,671 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-07-27 01:39:42,331 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-07-27 01:39:47,398 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-07-27 01:40:38,772 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS