Started by upstream project "Trigger" build number 28 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 0f0fc56a61fb33d243b6c42580a3c7392b2fab94 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 0f0fc56a61fb33d243b6c42580a3c7392b2fab94 # timeout=10 Commit message: "Merge pull request #354 from ome/dependabot/submodules/scripts-2078ac7" > git rev-list --no-walk 0f0fc56a61fb33d243b6c42580a3c7392b2fab94 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 25 [Pipeline] sh > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.11.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.6-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.31.0-py3-none-any.whl (62 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.11.0-py3-none-any.whl (34 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl (4.6 MB) Using cached idna-3.6-py3-none-any.whl (61 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.5 future-1.0.0 idna-3.6 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.11.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-04-06 00:43:04,257 [ scc.config] DEBUG Found github.token 2024-04-06 00:43:04,260 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-04-06 00:43:04,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:43:04,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:43:05,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-04-06 00:43:05,302 [ scc.gh] DEBUG 3192 remaining from 5000 (Reset at 00:04 2024-04-06 00:43:05,303 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:05,308 [ scc.git] DEBUG Check current status 2024-04-06 00:43:05,308 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:05,312 [ scc.git] DEBUG 0f0fc56 Merge pull request #354 from ome/dependabot/submodules/scripts-2078ac7 2024-04-06 00:43:05,312 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:05,354 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-06 00:43:05,357 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-06 00:43:05,359 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-06 00:43:05,362 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-06 00:43:05,365 [ scc.git] DEBUG 3b7ccfa865a44b0309b69c6dca34af2d12343a5d omero-figure (v6.2.0-1-g3b7ccfa8) 2024-04-06 00:43:05,367 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-06 00:43:05,370 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-06 00:43:05,418 [ scc.git] DEBUG a232ed07b982c17d7bb87f2d93a72c451ae836f3 omero-iviewer (v0.13.0-16-ga232ed0) 2024-04-06 00:43:05,421 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-06 00:43:05,424 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-06 00:43:05,426 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-06 00:43:05,429 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-06 00:43:05,432 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-06 00:43:05,434 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-06 00:43:05,437 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-06 00:43:05,440 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-06 00:43:05,442 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-06 00:43:05,444 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-06 00:43:05,447 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-06 00:43:05,449 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-06 00:43:05,452 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-06 00:43:05,455 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-06 00:43:05,459 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:05,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-04-06 00:43:06,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:06,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:07,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:07,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:07,474 [ scc.git] DEBUG Resetting... 2024-04-06 00:43:07,475 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-04-06 00:43:07,484 [ scc.git] DEBUG HEAD is now at 0f0fc56 Merge pull request #354 from ome/dependabot/submodules/scripts-2078ac7 2024-04-06 00:43:07,484 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-04-06 00:43:07,583 [ scc.git] DEBUG Check current status 2024-04-06 00:43:07,583 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:07,588 [ scc.git] DEBUG 0f0fc56 Merge pull request #354 from ome/dependabot/submodules/scripts-2078ac7 2024-04-06 00:43:07,588 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:07,639 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-06 00:43:07,641 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-06 00:43:07,645 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-06 00:43:07,648 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-06 00:43:07,651 [ scc.git] DEBUG 3b7ccfa865a44b0309b69c6dca34af2d12343a5d omero-figure (v6.2.0-1-g3b7ccfa8) 2024-04-06 00:43:07,654 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-06 00:43:07,656 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-06 00:43:07,660 [ scc.git] DEBUG a232ed07b982c17d7bb87f2d93a72c451ae836f3 omero-iviewer (v0.13.0-16-ga232ed0) 2024-04-06 00:43:07,663 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-06 00:43:07,666 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-06 00:43:07,668 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-06 00:43:07,671 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-06 00:43:07,674 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-06 00:43:07,676 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-06 00:43:07,679 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-06 00:43:07,682 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-06 00:43:07,684 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-06 00:43:07,686 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-06 00:43:07,689 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-06 00:43:07,691 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-06 00:43:07,695 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-06 00:43:07,698 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-06 00:43:07,699 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-04-06 00:43:07,699 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-04-06 00:43:07,700 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-04-06 00:43:07,700 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-04-06 00:43:07,700 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-04-06 00:43:07,700 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:43:07,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-04-06 00:43:07,913 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:43:07,913 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:43:07,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:43:07,918 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:43:07,922 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:43:07,922 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:43:07,926 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:43:07,929 [ scc.git] DEBUG Already up to date. 2024-04-06 00:43:07,929 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:43:07,929 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:43:07,929 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:43:07,933 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:43:07,985 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:43:07,985 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:43:07,989 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:43:08,597 [ scc.git] DEBUG has no local changes 2024-04-06 00:43:08,598 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:43:08,670 [ scc.git] DEBUG [detached HEAD 09ce6a5] merge master -Dorg -Snone 2024-04-06 00:43:08,671 [ scc.merge] INFO Repository: ome/omero-plugins 2024-04-06 00:43:08,671 [ scc.merge] INFO Already up to date. 2024-04-06 00:43:08,671 [ scc.merge] INFO 2024-04-06 00:43:08,671 [ scc.merge] INFO 2024-04-06 00:43:08,671 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-04-06 00:43:08,671 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-04-06 00:43:18,596 [ scc.config] DEBUG Found github.token 2024-04-06 00:43:18,599 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-04-06 00:43:18,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:43:19,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:43:19,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-04-06 00:43:19,651 [ scc.gh] DEBUG 3184 remaining from 5000 (Reset at 00:04 2024-04-06 00:43:19,651 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:19,656 [ scc.git] DEBUG Check current status 2024-04-06 00:43:19,656 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:19,662 [ scc.git] DEBUG 09ce6a5 merge master -Dorg -Snone 2024-04-06 00:43:19,663 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:19,721 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-06 00:43:19,724 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-06 00:43:19,727 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-06 00:43:19,731 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-06 00:43:19,735 [ scc.git] DEBUG 3b7ccfa865a44b0309b69c6dca34af2d12343a5d omero-figure (v6.2.0-1-g3b7ccfa8) 2024-04-06 00:43:19,738 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-06 00:43:19,741 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-06 00:43:19,744 [ scc.git] DEBUG a232ed07b982c17d7bb87f2d93a72c451ae836f3 omero-iviewer (v0.13.0-16-ga232ed0) 2024-04-06 00:43:19,748 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-06 00:43:19,751 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-06 00:43:19,754 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-06 00:43:19,758 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-06 00:43:19,762 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-06 00:43:19,766 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-06 00:43:19,769 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-06 00:43:19,773 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-06 00:43:19,775 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-06 00:43:19,779 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-06 00:43:19,782 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-06 00:43:19,785 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-06 00:43:19,788 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-06 00:43:19,791 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-06 00:43:19,796 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:19,796 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-04-06 00:43:19,799 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-04-06 00:43:20,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-04-06 00:43:20,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:21,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:21,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:21,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:21,852 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:21,930 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-06 00:43:21,930 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:21,936 [ scc.git] DEBUG Check current status 2024-04-06 00:43:21,936 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:21,941 [ scc.git] DEBUG c9c839c Merge pull request #64 from jburel/gateway_5_8_2 2024-04-06 00:43:21,941 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:21,993 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:22,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-04-06 00:43:22,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:23,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:23,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:24,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:24,101 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:24,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:24,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-06 00:43:24,145 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:24,150 [ scc.git] DEBUG Check current status 2024-04-06 00:43:24,150 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:24,154 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-04-06 00:43:24,154 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:24,199 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:24,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-04-06 00:43:24,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:25,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:25,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:26,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:26,256 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:26,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:26,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-06 00:43:26,297 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:26,301 [ scc.git] DEBUG Check current status 2024-04-06 00:43:26,301 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:26,305 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-04-06 00:43:26,305 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:26,349 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:26,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-04-06 00:43:27,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:27,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:28,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:28,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:28,410 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:28,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:28,451 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-06 00:43:28,451 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:28,456 [ scc.git] DEBUG Check current status 2024-04-06 00:43:28,456 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:28,460 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-06 00:43:28,460 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:28,510 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:28,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-04-06 00:43:29,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:29,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:30,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:30,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:30,591 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:30,640 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:30,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-06 00:43:30,641 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:30,646 [ scc.git] DEBUG Check current status 2024-04-06 00:43:30,646 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:30,664 [ scc.git] DEBUG 3b7ccfa8 Bump version: 6.2.0 → 6.2.1.dev0 2024-04-06 00:43:30,665 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:30,720 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:31,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-04-06 00:43:31,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:31,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:32,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:32,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:32,770 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:32,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:32,813 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-06 00:43:32,813 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:32,818 [ scc.git] DEBUG Check current status 2024-04-06 00:43:32,818 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:32,823 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-04-06 00:43:32,824 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:32,873 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:33,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-04-06 00:43:33,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:34,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:34,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:34,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:34,942 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:34,982 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:34,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-06 00:43:34,984 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:34,989 [ scc.git] DEBUG Check current status 2024-04-06 00:43:34,990 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:34,994 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-04-06 00:43:34,994 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:35,038 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:35,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-04-06 00:43:35,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:36,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:36,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:37,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:37,071 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:37,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:37,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-06 00:43:37,120 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:37,125 [ scc.git] DEBUG Check current status 2024-04-06 00:43:37,125 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:37,129 [ scc.git] DEBUG a232ed0 Merge pull request #466 from ome/dependabot/npm_and_yarn/follow-redirects-1.15.6 2024-04-06 00:43:37,129 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:37,174 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:37,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-04-06 00:43:38,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:38,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:38,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:39,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:39,237 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:39,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:39,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-06 00:43:39,284 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:39,288 [ scc.git] DEBUG Check current status 2024-04-06 00:43:39,288 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:39,292 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-04-06 00:43:39,293 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:39,340 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:39,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-04-06 00:43:40,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:40,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:40,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:41,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:41,390 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:41,439 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:41,440 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-06 00:43:41,440 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:41,446 [ scc.git] DEBUG Check current status 2024-04-06 00:43:41,446 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:41,452 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-06 00:43:41,452 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:41,509 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:41,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-04-06 00:43:42,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:42,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:43,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:43,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:43,537 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:43,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:43,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-06 00:43:43,576 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:43,580 [ scc.git] DEBUG Check current status 2024-04-06 00:43:43,580 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:43,584 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-04-06 00:43:43,585 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:43,627 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:44,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-04-06 00:43:44,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:44,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:45,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:45,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:45,719 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:45,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:45,771 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-06 00:43:45,771 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:45,777 [ scc.git] DEBUG Check current status 2024-04-06 00:43:45,777 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:45,784 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-04-06 00:43:45,785 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:45,855 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:46,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-04-06 00:43:46,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:47,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:47,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:47,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:47,888 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:47,933 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:47,934 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-06 00:43:47,935 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:47,941 [ scc.git] DEBUG Check current status 2024-04-06 00:43:47,941 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:47,947 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-04-06 00:43:47,947 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:47,995 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:48,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-04-06 00:43:48,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:49,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:49,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:50,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:50,037 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:50,088 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:50,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-06 00:43:50,089 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:50,094 [ scc.git] DEBUG Check current status 2024-04-06 00:43:50,094 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:50,103 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-04-06 00:43:50,104 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:50,158 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:50,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-04-06 00:43:50,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:51,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:51,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:52,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:52,228 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:52,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:52,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-06 00:43:52,268 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:52,274 [ scc.git] DEBUG Check current status 2024-04-06 00:43:52,274 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:52,279 [ scc.git] DEBUG a0148a6 Merge pull request #68 from sbesson/pytest 2024-04-06 00:43:52,279 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:52,331 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:52,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-06 00:43:52,653 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-06 00:43:52,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-04-06 00:43:53,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:53,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:54,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:54,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:54,538 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:54,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:54,578 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-06 00:43:54,578 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:54,583 [ scc.git] DEBUG Check current status 2024-04-06 00:43:54,583 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:54,587 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-04-06 00:43:54,587 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:54,630 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:55,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-04-06 00:43:55,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:56,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:56,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:56,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:56,841 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:56,885 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:56,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-06 00:43:56,886 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:56,892 [ scc.git] DEBUG Check current status 2024-04-06 00:43:56,892 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:56,898 [ scc.git] DEBUG deab817 update setup-python to v4 2024-04-06 00:43:56,899 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:56,948 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:57,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-04-06 00:43:57,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:43:58,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:43:58,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:43:59,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:43:59,005 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:43:59,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:43:59,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-06 00:43:59,046 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:43:59,051 [ scc.git] DEBUG Check current status 2024-04-06 00:43:59,052 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:43:59,057 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-04-06 00:43:59,057 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:43:59,104 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:43:59,105 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-04-06 00:43:59,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-04-06 00:43:59,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:44:00,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:44:00,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:44:01,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:44:01,151 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:44:01,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:44:01,204 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-06 00:44:01,204 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:44:01,210 [ scc.git] DEBUG Check current status 2024-04-06 00:44:01,210 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:44:01,216 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-04-06 00:44:01,216 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:44:01,266 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:44:01,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-06 00:44:01,576 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-06 00:44:01,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-04-06 00:44:02,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:44:02,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:44:03,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:44:03,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:44:03,505 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:44:03,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:44:03,557 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-06 00:44:03,557 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:44:03,564 [ scc.git] DEBUG Check current status 2024-04-06 00:44:03,564 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:44:03,572 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-04-06 00:44:03,572 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:44:03,628 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:44:03,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-06 00:44:03,975 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-06 00:44:04,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-04-06 00:44:04,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:44:05,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:44:05,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:44:05,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:44:05,882 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:44:05,949 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:44:05,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-06 00:44:05,950 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:44:05,959 [ scc.git] DEBUG Check current status 2024-04-06 00:44:05,960 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:44:05,966 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-04-06 00:44:05,966 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:44:06,026 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:44:06,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-04-06 00:44:06,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:44:07,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:44:07,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:44:08,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:44:08,015 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:44:08,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:44:08,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-06 00:44:08,091 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-06 00:44:08,109 [ scc.git] DEBUG Check current status 2024-04-06 00:44:08,109 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:44:08,130 [ scc.git] DEBUG 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-04-06 00:44:08,132 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:44:08,229 [ scc.config] DEBUG Found remote.origin.url 2024-04-06 00:44:08,230 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-04-06 00:44:08,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-06 00:44:08,443 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-06 00:44:08,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-04-06 00:44:09,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-06 00:44:09,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-06 00:44:09,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-06 00:44:10,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-06 00:44:10,383 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:44:10,422 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:44:10,422 [ scc.git] DEBUG Resetting... 2024-04-06 00:44:10,423 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-04-06 00:44:10,433 [ scc.git] DEBUG HEAD is now at 09ce6a5 merge master -Dorg -Snone 2024-04-06 00:44:10,434 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-04-06 00:44:10,534 [ scc.git] DEBUG Check current status 2024-04-06 00:44:10,535 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-06 00:44:10,541 [ scc.git] DEBUG 09ce6a5 merge master -Dorg -Snone 2024-04-06 00:44:10,541 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-06 00:44:10,591 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-06 00:44:10,593 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-06 00:44:10,596 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-06 00:44:10,599 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-06 00:44:10,602 [ scc.git] DEBUG 3b7ccfa865a44b0309b69c6dca34af2d12343a5d omero-figure (v6.2.0-1-g3b7ccfa8) 2024-04-06 00:44:10,605 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-06 00:44:10,607 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-06 00:44:10,610 [ scc.git] DEBUG a232ed07b982c17d7bb87f2d93a72c451ae836f3 omero-iviewer (v0.13.0-16-ga232ed0) 2024-04-06 00:44:10,613 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-06 00:44:10,616 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-06 00:44:10,618 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-06 00:44:10,622 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-06 00:44:10,625 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-06 00:44:10,628 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-06 00:44:10,631 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-06 00:44:10,634 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-06 00:44:10,637 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-06 00:44:10,639 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-06 00:44:10,642 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-06 00:44:10,645 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-06 00:44:10,647 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-06 00:44:10,651 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-06 00:44:10,652 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-04-06 00:44:10,652 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-04-06 00:44:10,652 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-04-06 00:44:10,652 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-04-06 00:44:10,652 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-04-06 00:44:10,652 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-04-06 00:44:10,652 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:44:10,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-04-06 00:44:10,820 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:44:10,820 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:10,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:10,828 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:44:10,836 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:44:10,836 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:44:10,846 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:44:10,854 [ scc.git] DEBUG Already up to date. 2024-04-06 00:44:10,854 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:44:10,854 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:10,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:10,860 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:44:10,916 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:10,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:10,922 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:44:11,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-04-06 00:44:11,244 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:44:11,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-06 00:44:11,245 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:11,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:11,251 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:44:11,257 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:44:11,257 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:44:11,264 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:44:11,271 [ scc.git] DEBUG Already up to date. 2024-04-06 00:44:11,271 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:44:11,271 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:11,271 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:11,276 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:44:11,317 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:11,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:11,323 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:44:11,366 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:44:11,373 [ scc.git] DEBUG has no local changes 2024-04-06 00:44:11,374 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:44:11,383 [ scc.git] DEBUG [detached HEAD c5e8cae] merge master -Dorg -Ssuccess-only 2024-04-06 00:44:11,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:44:11,384 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:44:11,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-04-06 00:44:12,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-04-06 00:44:12,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-04-06 00:44:13,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-04-06 00:44:13,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:44:14,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-06 00:44:14,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-04-06 00:44:15,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:44:15,118 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-04-06 00:44:15,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-04-06 00:44:16,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-04-06 00:44:16,048 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:44:16,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-06 00:44:16,049 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:16,049 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:16,060 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:44:16,072 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:44:16,072 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:44:16,084 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:44:16,093 [ scc.git] DEBUG Already up to date. 2024-04-06 00:44:16,093 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-04-06 00:44:16,608 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-04-06 00:44:16,608 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-04-06 00:44:16,615 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:44:16,616 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:16,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:16,623 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-04-06 00:44:16,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:16,641 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-04-06 00:44:16,659 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:44:16,662 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-04-06 00:44:16,662 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-04-06 00:44:16,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:44:16,820 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:44:16,896 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:16,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:16,905 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:44:16,971 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:44:16,985 [ scc.git] DEBUG has no local changes 2024-04-06 00:44:16,986 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:44:17,002 [ scc.git] DEBUG [detached HEAD 3504b2f] merge master -Dorg -Ssuccess-only 2024-04-06 00:44:17,003 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:44:17,003 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:44:17,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-04-06 00:44:17,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-04-06 00:44:18,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-04-06 00:44:18,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-04-06 00:44:19,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-04-06 00:44:19,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-04-06 00:44:20,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:44:20,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-04-06 00:44:21,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:44:21,079 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-04-06 00:44:21,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-04-06 00:44:21,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-04-06 00:44:22,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-04-06 00:44:22,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-04-06 00:44:23,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-04-06 00:44:23,337 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:44:23,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-06 00:44:23,337 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:23,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:23,350 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:44:23,357 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:44:23,357 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:44:23,364 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:44:23,372 [ scc.git] DEBUG Already up to date. 2024-04-06 00:44:23,372 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-04-06 00:44:23,882 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-04-06 00:44:23,882 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-04-06 00:44:23,888 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:44:23,889 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:23,889 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:23,896 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-04-06 00:44:23,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:23,911 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-04-06 00:44:23,941 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:44:23,949 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-04-06 00:44:23,949 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-04-06 00:44:24,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:44:24,098 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:44:24,162 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:24,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:24,170 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:44:24,218 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:44:24,228 [ scc.git] DEBUG has no local changes 2024-04-06 00:44:24,228 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:44:24,241 [ scc.git] DEBUG [detached HEAD 17c9cd4] merge master -Dorg -Ssuccess-only 2024-04-06 00:44:24,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:44:24,242 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:44:24,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-04-06 00:44:25,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-04-06 00:44:25,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-04-06 00:44:26,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-04-06 00:44:26,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-06 00:44:27,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:44:27,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-06 00:44:27,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-06 00:44:28,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-04-06 00:44:28,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-06 00:44:29,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-04-06 00:44:29,279 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-04-06 00:44:29,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-04-06 00:44:30,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-04-06 00:44:30,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-04-06 00:44:31,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-04-06 00:44:31,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:44:32,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-04-06 00:44:32,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:44:32,617 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-04-06 00:44:33,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-04-06 00:44:33,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-04-06 00:44:34,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-04-06 00:44:34,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-04-06 00:44:35,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:44:35,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-04-06 00:44:35,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:44:35,972 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-04-06 00:44:35,972 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:44:35,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-06 00:44:35,973 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:35,973 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:35,986 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:44:35,992 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:44:35,993 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:44:36,000 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:44:36,008 [ scc.git] DEBUG Already up to date. 2024-04-06 00:44:36,008 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-04-06 00:44:36,505 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-06 00:44:36,505 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-04-06 00:44:36,511 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-04-06 00:44:36,995 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-06 00:44:36,996 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-04-06 00:44:37,001 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-04-06 00:44:37,653 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-06 00:44:37,653 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-04-06 00:44:37,661 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:44:37,661 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:37,661 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:37,668 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-06 00:44:37,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:37,686 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-06 00:44:37,754 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-04-06 00:44:37,755 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-06 00:44:37,755 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-04-06 00:44:37,755 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-06 00:44:37,755 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-06 00:44:37,764 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-06 00:44:37,773 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-06 00:44:37,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:44:37,928 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-06 00:44:37,937 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-06 00:44:37,945 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-04-06 00:44:37,951 [ scc.config] DEBUG Found github.token 2024-04-06 00:44:37,951 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-04-06 00:44:37,952 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-06 00:44:37,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:37,966 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-06 00:44:38,004 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-04-06 00:44:38,005 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-04-06 00:44:38,005 [ scc.git] DEBUG Auto-merging setup.py 2024-04-06 00:44:38,005 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-04-06 00:44:38,005 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-06 00:44:38,005 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-04-06 00:44:38,005 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-04-06 00:44:38,006 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-06 00:44:38,007 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-06 00:44:38,013 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-06 00:44:38,022 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-06 00:44:38,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:44:38,338 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-06 00:44:38,349 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-06 00:44:38,356 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-04-06 00:44:38,361 [ scc.config] DEBUG Found github.token 2024-04-06 00:44:38,361 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-04-06 00:44:38,361 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-04-06 00:44:38,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:38,376 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-04-06 00:44:38,391 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-04-06 00:44:38,391 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-06 00:44:38,392 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:44:38,396 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-04-06 00:44:38,396 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-04-06 00:44:38,396 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-04-06 00:44:38,396 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-04-06 00:44:38,396 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-04-06 00:44:38,396 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-04-06 00:44:38,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:44:38,753 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:44:38,805 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:38,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:38,811 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:44:38,856 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:44:38,864 [ scc.git] DEBUG has no local changes 2024-04-06 00:44:38,865 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:44:38,875 [ scc.git] DEBUG [detached HEAD 96c02e5] merge master -Dorg -Ssuccess-only 2024-04-06 00:44:38,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:44:38,876 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:44:39,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-04-06 00:44:39,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/548 HTTP/1.1" 200 None 2024-04-06 00:44:40,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/32b0ccd55ce3c95dabcf8ebf817b032e4b864438 HTTP/1.1" 200 None 2024-04-06 00:44:40,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/32b0ccd55ce3c95dabcf8ebf817b032e4b864438/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:44:41,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/32b0ccd55ce3c95dabcf8ebf817b032e4b864438/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-06 00:44:41,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/32b0ccd55ce3c95dabcf8ebf817b032e4b864438 HTTP/1.1" 200 None 2024-04-06 00:44:42,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/32b0ccd55ce3c95dabcf8ebf817b032e4b864438?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:44:42,077 [ scc.repo] DEBUG - PR 548 will-moore 'Fix cropping of panel labels and float usage for shape labels' 2024-04-06 00:44:42,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543 HTTP/1.1" 200 None 2024-04-06 00:44:42,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543/comments HTTP/1.1" 200 None 2024-04-06 00:44:43,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/477 HTTP/1.1" 200 None 2024-04-06 00:44:43,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/477/comments HTTP/1.1" 200 None 2024-04-06 00:44:44,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c3019fc200d79faa42352a22af98e2c828b217cc HTTP/1.1" 200 None 2024-04-06 00:44:44,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c3019fc200d79faa42352a22af98e2c828b217cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:44:45,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c3019fc200d79faa42352a22af98e2c828b217cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-06 00:44:45,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c3019fc200d79faa42352a22af98e2c828b217cc HTTP/1.1" 200 None 2024-04-06 00:44:46,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c3019fc200d79faa42352a22af98e2c828b217cc?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:44:46,282 [ scc.repo] DEBUG - PR 477 will-moore 'Vite' 2024-04-06 00:44:46,282 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:44:46,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-06 00:44:46,282 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:46,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:46,290 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:44:46,297 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:44:46,297 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:44:46,304 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:44:46,313 [ scc.git] DEBUG Already up to date. 2024-04-06 00:44:46,313 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-04-06 00:44:46,766 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-04-06 00:44:46,767 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-04-06 00:44:46,774 [ scc.git] DEBUG Calling 'git fetch origin pull/548/head' 2024-04-06 00:44:47,232 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-04-06 00:44:47,232 [ scc.git] DEBUG * branch refs/pull/548/head -> FETCH_HEAD 2024-04-06 00:44:47,238 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:44:47,238 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:47,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:47,245 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c3019fc200d79faa42352a22af98e2c828b217cc' 2024-04-06 00:44:47,297 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:47,304 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Vite) c3019fc200d79faa42352a22af98e2c828b217cc' 2024-04-06 00:44:47,348 [ scc.git] DEBUG Auto-merging .bumpversion.cfg 2024-04-06 00:44:47,348 [ scc.git] DEBUG Auto-merging setup.py 2024-04-06 00:44:47,349 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:44:47,399 [ scc.git] DEBUG .bumpversion.cfg | 1 + 2024-04-06 00:44:47,399 [ scc.git] DEBUG .gitignore | 5 +- 2024-04-06 00:44:47,399 [ scc.git] DEBUG Dockerfile | 15 - 2024-04-06 00:44:47,399 [ scc.git] DEBUG Gruntfile.js | 177 - 2024-04-06 00:44:47,399 [ scc.git] DEBUG README.rst | 58 +- 2024-04-06 00:44:47,399 [ scc.git] DEBUG deploy_build.sh | 12 + 2024-04-06 00:44:47,399 [ scc.git] DEBUG docs/demo/index.html | 940 --- 2024-04-06 00:44:47,399 [ scc.git] DEBUG .../static/figure/3rdparty/backbone-1.0.0.js | 1571 ---- 2024-04-06 00:44:47,399 [ scc.git] DEBUG .../figure/3rdparty/backbone.mousetrap/README.md | 28 - 2024-04-06 00:44:47,399 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/css/bootstrap.css | 6805 ---------------- 2024-04-06 00:44:47,399 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/css/bootstrap.min.css | 9 - 2024-04-06 00:44:47,399 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.eot | Bin 14079 -> 0 bytes 2024-04-06 00:44:47,399 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.svg | 228 - 2024-04-06 00:44:47,399 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.ttf | Bin 29512 -> 0 bytes 2024-04-06 00:44:47,399 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.woff | Bin 16448 -> 0 bytes 2024-04-06 00:44:47,399 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/js/bootstrap.js | 1999 ----- 2024-04-06 00:44:47,399 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/js/bootstrap.min.js | 6 - 2024-04-06 00:44:47,400 [ scc.git] DEBUG .../css/bootstrap-colorpicker.css | 217 - 2024-04-06 00:44:47,400 [ scc.git] DEBUG .../css/bootstrap-colorpicker.min.css | 9 - 2024-04-06 00:44:47,400 [ scc.git] DEBUG .../img/bootstrap-colorpicker/alpha-horizontal.png | Bin 3635 -> 0 bytes 2024-04-06 00:44:47,400 [ scc.git] DEBUG .../img/bootstrap-colorpicker/alpha.png | Bin 3271 -> 0 bytes 2024-04-06 00:44:47,400 [ scc.git] DEBUG .../img/bootstrap-colorpicker/hue.png | Bin 2972 -> 0 bytes 2024-04-06 00:44:47,400 [ scc.git] DEBUG .../img/bootstrap-colorpicker/saturation.png | Bin 8817 -> 0 bytes 2024-04-06 00:44:47,400 [ scc.git] DEBUG .../js/bootstrap-colorpicker.js | 1028 --- 2024-04-06 00:44:47,400 [ scc.git] DEBUG .../js/bootstrap-colorpicker.min.js | 1 - 2024-04-06 00:44:47,400 [ scc.git] DEBUG .../figure/3rdparty/jquery-1.11.1/jquery.min.js | 4 - 2024-04-06 00:44:47,400 [ scc.git] DEBUG .../jquery-ui-1.10.4/css/jquery.ui.base.css | 28 - 2024-04-06 00:44:47,400 [ scc.git] DEBUG .../jquery-ui-1.10.4/css/jquery.ui.slider.css | 73 - 2024-04-06 00:44:47,400 [ scc.git] DEBUG .../3rdparty/jquery-ui-1.10.4/jquery-ui.min.js | 12 - 2024-04-06 00:44:47,400 [ scc.git] DEBUG 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src/js/views/info_panel_view.js | 20 +- 2024-04-06 00:44:47,404 [ scc.git] DEBUG src/js/views/labels_from_maps_modal.js | 53 +- 2024-04-06 00:44:47,404 [ scc.git] DEBUG src/js/views/legend_view.js | 13 +- 2024-04-06 00:44:47,404 [ scc.git] DEBUG src/js/views/lutpicker.js | 39 +- 2024-04-06 00:44:47,404 [ scc.git] DEBUG src/js/views/modal_views.js | 57 +- 2024-04-06 00:44:47,404 [ scc.git] DEBUG src/js/views/panel_view.js | 39 +- 2024-04-06 00:44:47,404 [ scc.git] DEBUG src/js/views/raphael-rect.js | 6 +- 2024-04-06 00:44:47,404 [ scc.git] DEBUG src/js/views/right_panel_view.js | 441 +- 2024-04-06 00:44:47,404 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 17 +- 2024-04-06 00:44:47,404 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 47 +- 2024-04-06 00:44:47,404 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 24 +- 2024-04-06 00:44:47,405 [ scc.git] DEBUG src/js/views/svg_model_view.js | 11 +- 2024-04-06 00:44:47,405 [ scc.git] DEBUG .../ome.csrf.js => 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scc.git] DEBUG ..._modal_roi.html => roi_modal_roi.template.html} | 4 +- 2024-04-06 00:44:47,405 [ scc.git] DEBUG ...al_shape.html => roi_modal_shape.template.html} | 0 2024-04-06 00:44:47,405 [ scc.git] DEBUG ...t_buttons.html => roi_zt_buttons.template.html} | 4 +- 2024-04-06 00:44:47,405 [ scc.git] DEBUG src/templates/rois_form.template.html | 94 + 2024-04-06 00:44:47,405 [ scc.git] DEBUG src/templates/rois_form_template.html | 93 - 2024-04-06 00:44:47,405 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 143 + 2024-04-06 00:44:47,405 [ scc.git] DEBUG src/templates/scalebar_form_template.html | 143 - 2024-04-06 00:44:47,405 [ scc.git] DEBUG ..._template.html => scalebar_panel.template.html} | 0 2024-04-06 00:44:47,405 [ scc.git] DEBUG ...r_template.html => shape_toolbar.template.html} | 62 +- 2024-04-06 00:44:47,405 [ scc.git] DEBUG src/templates/viewport.template.html | 5 + 2024-04-06 00:44:47,405 [ scc.git] DEBUG ..._template.html => viewport_inner.template.html} | 0 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DEBUG rename {omero_figure/static/figure => src}/images/line-icon-16.png (100%) 2024-04-06 00:44:47,407 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/luts_10.png (100%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/markdown_dark32x20.png (100%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/markdown_light32x20.png (100%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/polygon-icon-16.png (100%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/polyline-icon-16.png (100%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/projection20.png (100%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/square-outline-icon-16.png (100%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG create mode 100644 src/index.html 2024-04-06 00:44:47,408 [ scc.git] DEBUG delete mode 100644 src/js/app.js 2024-04-06 00:44:47,408 [ scc.git] DEBUG create mode 100644 src/js/main.js 2024-04-06 00:44:47,408 [ scc.git] DEBUG create mode 100644 src/js/shapeEditorTest.js 2024-04-06 00:44:47,408 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/ellipse.js 2024-04-06 00:44:47,408 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/line.js 2024-04-06 00:44:47,408 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/polygon.js 2024-04-06 00:44:47,408 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/rect.js 2024-04-06 00:44:47,408 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/shape_manager.js 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename {omero_figure/static/figure/3rdparty/backbone.mousetrap => src/js/views}/backbone.mousetrap.js (76%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG mode change 100755 => 100644 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename omero_figure/static/figure/3rdparty/ome.csrf.js => src/js/views/util.csrf.js (84%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG create mode 100644 src/js/views/zt_sliders_view.js 2024-04-06 00:44:47,408 [ scc.git] DEBUG create mode 100644 src/scss/styles.scss 2024-04-06 00:44:47,408 [ scc.git] DEBUG create mode 100644 src/shapeEditorTest.html 2024-04-06 00:44:47,408 [ scc.git] DEBUG create mode 100644 src/templates/channel_slider.template.html 2024-04-06 00:44:47,408 [ scc.git] DEBUG delete mode 100644 src/templates/channel_slider_template.html 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename src/templates/{figure_panel_template.html => figure_panel.template.html} (77%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename src/templates/files/{figure_file_item.html => figure_file_item.template.html} (100%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename src/templates/{image_display_options_template.html => image_display_options.template.html} (54%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename src/templates/{info_panel_template.html => info_panel.template.html} (90%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename src/templates/labels/{label_template.html => label.template.html} (100%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename src/templates/labels/{label_right_vertical_template.html => label_right_vertical.template.html} (100%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename src/templates/labels/{label_table_template.html => label_table.template.html} (100%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename src/templates/labels/{label_vertical_template.html => label_vertical.template.html} (100%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG rename src/templates/{labels_form_template.html => labels_form.template.html} (89%) 2024-04-06 00:44:47,408 [ scc.git] DEBUG create mode 100644 src/templates/labels_form_inner.template.html 2024-04-06 00:44:47,408 [ scc.git] DEBUG delete mode 100644 src/templates/labels_form_inner_template.html 2024-04-06 00:44:47,409 [ scc.git] DEBUG rename src/templates/{lut_picker.html => lut_picker.template.html} (64%) 2024-04-06 00:44:47,409 [ scc.git] DEBUG rename src/templates/modal_dialogs/{crop_modal_roi.html => crop_modal_roi.template.html} (100%) 2024-04-06 00:44:47,409 [ scc.git] DEBUG rename src/templates/modal_dialogs/{paper_setup_modal_template.html => paper_setup_modal.template.html} (54%) 2024-04-06 00:44:47,409 [ scc.git] DEBUG rename src/templates/modal_dialogs/{preview_Id_change_template.html => preview_id_change.template.html} (52%) 2024-04-06 00:44:47,409 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_roi.html => roi_modal_roi.template.html} (94%) 2024-04-06 00:44:47,409 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_shape.html => roi_modal_shape.template.html} (100%) 2024-04-06 00:44:47,409 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_zt_buttons.html => roi_zt_buttons.template.html} (62%) 2024-04-06 00:44:47,409 [ scc.git] DEBUG create mode 100644 src/templates/rois_form.template.html 2024-04-06 00:44:47,409 [ scc.git] DEBUG delete mode 100644 src/templates/rois_form_template.html 2024-04-06 00:44:47,409 [ scc.git] DEBUG create mode 100644 src/templates/scalebar_form.template.html 2024-04-06 00:44:47,409 [ scc.git] DEBUG delete mode 100644 src/templates/scalebar_form_template.html 2024-04-06 00:44:47,409 [ scc.git] DEBUG rename src/templates/{scalebar_panel_template.html => scalebar_panel.template.html} (100%) 2024-04-06 00:44:47,409 [ scc.git] DEBUG rename src/templates/shapes/{shape_toolbar_template.html => shape_toolbar.template.html} (60%) 2024-04-06 00:44:47,409 [ scc.git] DEBUG create mode 100644 src/templates/viewport.template.html 2024-04-06 00:44:47,409 [ scc.git] DEBUG rename src/templates/{viewport_inner_template.html => viewport_inner.template.html} (100%) 2024-04-06 00:44:47,409 [ scc.git] DEBUG delete mode 100644 src/templates/viewport_template.html 2024-04-06 00:44:47,409 [ scc.git] DEBUG rename src/templates/{xywh_panel_template.html => xywh_panel.template.html} (64%) 2024-04-06 00:44:47,409 [ scc.git] DEBUG rename src/templates/{zoom_crop_template.html => zoom_crop.template.html} (54%) 2024-04-06 00:44:47,409 [ scc.git] DEBUG create mode 100644 vite.config.js 2024-04-06 00:44:47,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:44:47,554 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...32b0ccd55ce3c95dabcf8ebf817b032e4b864438' 2024-04-06 00:44:47,564 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:47,572 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 548 (Fix cropping of panel labels and float usage for shape labels) 32b0ccd55ce3c95dabcf8ebf817b032e4b864438' 2024-04-06 00:44:47,608 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:44:47,613 [ scc.git] DEBUG omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py | 6 +++--- 2024-04-06 00:44:47,613 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2024-04-06 00:44:47,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:44:47,961 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:44:48,000 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:48,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:48,006 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:44:48,044 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:44:48,056 [ scc.git] DEBUG has no local changes 2024-04-06 00:44:48,056 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 477 will-moore 'Vite' - PR 548 will-moore 'Fix cropping of panel labels and float usage for shape labels' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:44:48,085 [ scc.git] DEBUG [detached HEAD e2814485] merge master -Dorg -Ssuccess-only 2024-04-06 00:44:48,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:44:48,086 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:44:48,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-04-06 00:44:48,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-04-06 00:44:49,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-04-06 00:44:49,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-04-06 00:44:50,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:44:50,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-04-06 00:44:51,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:44:51,191 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-04-06 00:44:51,191 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:44:51,191 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-06 00:44:51,191 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:51,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:51,197 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:44:51,202 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:44:51,202 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:44:51,208 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:44:51,214 [ scc.git] DEBUG Already up to date. 2024-04-06 00:44:51,215 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-04-06 00:44:51,652 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-04-06 00:44:51,652 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-04-06 00:44:51,658 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:44:51,658 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:51,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:51,664 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-04-06 00:44:51,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:51,678 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-04-06 00:44:51,713 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-04-06 00:44:51,714 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:44:51,717 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-04-06 00:44:51,717 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-04-06 00:44:51,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:44:51,869 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:44:51,920 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:51,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:51,927 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:44:51,977 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:44:51,986 [ scc.git] DEBUG has no local changes 2024-04-06 00:44:51,987 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:44:51,999 [ scc.git] DEBUG [detached HEAD 07909d9] merge master -Dorg -Ssuccess-only 2024-04-06 00:44:52,000 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:44:52,000 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:44:52,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-04-06 00:44:52,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-04-06 00:44:52,796 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-06 00:44:53,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-04-06 00:44:53,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:44:54,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-06 00:44:54,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-04-06 00:44:55,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:44:55,349 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-04-06 00:44:55,349 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:44:55,350 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-06 00:44:55,350 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:55,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:55,359 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:44:55,368 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:44:55,369 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:44:55,379 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:44:55,390 [ scc.git] DEBUG Already up to date. 2024-04-06 00:44:55,390 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-04-06 00:44:55,814 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-04-06 00:44:55,814 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-04-06 00:44:55,821 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:44:55,821 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:55,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:55,828 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-04-06 00:44:55,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:55,841 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-04-06 00:44:55,854 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:44:55,858 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-04-06 00:44:55,858 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-04-06 00:44:56,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:44:56,014 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:44:56,074 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:44:56,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:44:56,081 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:44:56,139 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:44:56,148 [ scc.git] DEBUG has no local changes 2024-04-06 00:44:56,148 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:44:56,158 [ scc.git] DEBUG [detached HEAD 108cf3d] merge master -Dorg -Ssuccess-only 2024-04-06 00:44:56,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:44:56,159 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:44:56,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-04-06 00:44:57,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/468 HTTP/1.1" 200 None 2024-04-06 00:44:57,014 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-06 00:44:57,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9f06f398570cddff1332355e1eda0fe54d88881d HTTP/1.1" 200 None 2024-04-06 00:44:58,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9f06f398570cddff1332355e1eda0fe54d88881d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:44:58,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9f06f398570cddff1332355e1eda0fe54d88881d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-06 00:44:59,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9f06f398570cddff1332355e1eda0fe54d88881d HTTP/1.1" 200 None 2024-04-06 00:44:59,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/9f06f398570cddff1332355e1eda0fe54d88881d?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:44:59,633 [ scc.repo] DEBUG - PR 468 dependabot[bot] 'Bump express from 4.18.2 to 4.19.2' 2024-04-06 00:45:00,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/467 HTTP/1.1" 200 None 2024-04-06 00:45:00,083 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-06 00:45:00,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/78e253cccecbd349db3bcb16514f5c8b2c4185e6 HTTP/1.1" 200 None 2024-04-06 00:45:01,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/78e253cccecbd349db3bcb16514f5c8b2c4185e6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:45:01,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/78e253cccecbd349db3bcb16514f5c8b2c4185e6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-06 00:45:02,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/78e253cccecbd349db3bcb16514f5c8b2c4185e6 HTTP/1.1" 200 None 2024-04-06 00:45:02,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/78e253cccecbd349db3bcb16514f5c8b2c4185e6?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:45:02,606 [ scc.repo] DEBUG - PR 467 dependabot[bot] 'Bump webpack-dev-middleware from 5.3.3 to 5.3.4' 2024-04-06 00:45:03,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-04-06 00:45:03,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-04-06 00:45:03,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/105a9369cdb853508da5ec4e0839c6f448bf3407 HTTP/1.1" 200 None 2024-04-06 00:45:04,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/105a9369cdb853508da5ec4e0839c6f448bf3407/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:45:04,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/105a9369cdb853508da5ec4e0839c6f448bf3407/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-06 00:45:05,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/105a9369cdb853508da5ec4e0839c6f448bf3407 HTTP/1.1" 200 None 2024-04-06 00:45:05,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/105a9369cdb853508da5ec4e0839c6f448bf3407?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:45:05,800 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-04-06 00:45:06,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/464 HTTP/1.1" 200 None 2024-04-06 00:45:06,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/464/comments HTTP/1.1" 200 None 2024-04-06 00:45:07,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98 HTTP/1.1" 200 None 2024-04-06 00:45:07,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:45:08,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-06 00:45:08,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98 HTTP/1.1" 200 None 2024-04-06 00:45:09,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/97542d9b749f93d4902f7dce703bbf2a04316a98?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:45:09,043 [ scc.repo] DEBUG - PR 464 will-moore 'Tile load error warning' 2024-04-06 00:45:09,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-04-06 00:45:09,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-04-06 00:45:10,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-04-06 00:45:10,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:45:11,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-04-06 00:45:11,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:45:11,808 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-04-06 00:45:12,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/456 HTTP/1.1" 200 None 2024-04-06 00:45:12,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/456/comments HTTP/1.1" 200 None 2024-04-06 00:45:13,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745 HTTP/1.1" 200 None 2024-04-06 00:45:13,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:45:14,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-06 00:45:14,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745 HTTP/1.1" 200 None 2024-04-06 00:45:15,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:45:15,066 [ scc.repo] DEBUG - PR 456 will-moore 'Don't use tiles for non-big movies' 2024-04-06 00:45:15,066 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:45:15,066 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-06 00:45:15,067 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:15,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:15,072 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:45:15,078 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:45:15,078 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:45:15,084 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:45:15,090 [ scc.git] DEBUG Already up to date. 2024-04-06 00:45:15,091 [ scc.git] DEBUG Calling 'git fetch origin pull/456/head' 2024-04-06 00:45:15,619 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-06 00:45:15,619 [ scc.git] DEBUG * branch refs/pull/456/head -> FETCH_HEAD 2024-04-06 00:45:15,625 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-04-06 00:45:16,080 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-06 00:45:16,081 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-04-06 00:45:16,087 [ scc.git] DEBUG Calling 'git fetch origin pull/464/head' 2024-04-06 00:45:16,634 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-06 00:45:16,635 [ scc.git] DEBUG * branch refs/pull/464/head -> FETCH_HEAD 2024-04-06 00:45:16,642 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-04-06 00:45:17,488 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-06 00:45:17,488 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-04-06 00:45:17,495 [ scc.git] DEBUG Calling 'git fetch origin pull/467/head' 2024-04-06 00:45:17,895 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-06 00:45:17,895 [ scc.git] DEBUG * branch refs/pull/467/head -> FETCH_HEAD 2024-04-06 00:45:17,901 [ scc.git] DEBUG Calling 'git fetch origin pull/468/head' 2024-04-06 00:45:18,306 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-06 00:45:18,306 [ scc.git] DEBUG * branch refs/pull/468/head -> FETCH_HEAD 2024-04-06 00:45:18,313 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:45:18,313 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:18,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:18,319 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2954dd294c5d9f89b64ca4cedcc76dd0c9a32745' 2024-04-06 00:45:18,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:18,332 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 456 (Don't use tiles for non-big movies) 2954dd294c5d9f89b64ca4cedcc76dd0c9a32745' 2024-04-06 00:45:18,374 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:45:18,378 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 5 +++-- 2024-04-06 00:45:18,378 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 2 deletions(-) 2024-04-06 00:45:18,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:45:18,540 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-04-06 00:45:18,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:18,554 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-04-06 00:45:18,598 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:45:18,603 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-04-06 00:45:18,604 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-04-06 00:45:18,604 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-04-06 00:45:18,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:45:18,941 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...97542d9b749f93d4902f7dce703bbf2a04316a98' 2024-04-06 00:45:18,953 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:18,962 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 464 (Tile load error warning) 97542d9b749f93d4902f7dce703bbf2a04316a98' 2024-04-06 00:45:19,026 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:45:19,032 [ scc.git] DEBUG css/app.css | 22 ++++++++++++++++++++++ 2024-04-06 00:45:19,032 [ scc.git] DEBUG src/events/events.js | 2 ++ 2024-04-06 00:45:19,033 [ scc.git] DEBUG src/index-dev.html | 6 +++--- 2024-04-06 00:45:19,033 [ scc.git] DEBUG src/viewers/ol3-viewer.html | 2 +- 2024-04-06 00:45:19,033 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 4 +++- 2024-04-06 00:45:19,033 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 39 +++++++++++++++++++++++++++++++++++++-- 2024-04-06 00:45:19,033 [ scc.git] DEBUG 6 files changed, 68 insertions(+), 7 deletions(-) 2024-04-06 00:45:19,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:45:19,347 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...105a9369cdb853508da5ec4e0839c6f448bf3407' 2024-04-06 00:45:19,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:19,366 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 105a9369cdb853508da5ec4e0839c6f448bf3407' 2024-04-06 00:45:19,514 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-04-06 00:45:19,516 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:45:19,523 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-04-06 00:45:19,523 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-04-06 00:45:19,523 [ scc.git] DEBUG src/app/header.html | 5 + 2024-04-06 00:45:19,523 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-04-06 00:45:19,523 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-04-06 00:45:19,523 [ scc.git] DEBUG src/utils/figure.js | 210 ++++++++++++++++++++++++++++++++++++++++++ 2024-04-06 00:45:19,523 [ scc.git] DEBUG 6 files changed, 283 insertions(+), 6 deletions(-) 2024-04-06 00:45:19,523 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-04-06 00:45:19,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:45:19,759 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e253cccecbd349db3bcb16514f5c8b2c4185e6' 2024-04-06 00:45:19,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:19,784 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 467 (Bump webpack-dev-middleware from 5.3.3 to 5.3.4) 78e253cccecbd349db3bcb16514f5c8b2c4185e6' 2024-04-06 00:45:19,849 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:45:19,869 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2024-04-06 00:45:19,869 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2024-04-06 00:45:20,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:45:20,155 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9f06f398570cddff1332355e1eda0fe54d88881d' 2024-04-06 00:45:20,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:20,182 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 468 (Bump express from 4.18.2 to 4.19.2) 9f06f398570cddff1332355e1eda0fe54d88881d' 2024-04-06 00:45:20,332 [ scc.git] DEBUG Auto-merging package-lock.json 2024-04-06 00:45:20,333 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:45:20,347 [ scc.git] DEBUG package-lock.json | 76 +++++++++++++++++++++++++++---------------------------- 2024-04-06 00:45:20,347 [ scc.git] DEBUG 1 file changed, 38 insertions(+), 38 deletions(-) 2024-04-06 00:45:20,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:45:20,569 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:45:20,618 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:20,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:20,625 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:45:20,672 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:45:20,685 [ scc.git] DEBUG has no local changes 2024-04-06 00:45:20,686 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 456 will-moore 'Don't use tiles for non-big movies' - PR 460 will-moore 'Channel min spinner fix' - PR 464 will-moore 'Tile load error warning' - PR 465 will-moore 'Save as Figure' - PR 467 dependabot[bot] 'Bump webpack-dev-middleware from 5.3.3 to 5.3.4' - PR 468 dependabot[bot] 'Bump express from 4.18.2 to 4.19.2' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:45:20,702 [ scc.git] DEBUG [detached HEAD f7671dd] merge master -Dorg -Ssuccess-only 2024-04-06 00:45:20,703 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:45:20,703 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:45:21,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-04-06 00:45:21,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-04-06 00:45:22,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-04-06 00:45:22,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-04-06 00:45:23,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:45:23,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-06 00:45:24,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-04-06 00:45:24,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:45:24,423 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-04-06 00:45:24,423 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:45:24,423 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-06 00:45:24,423 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:24,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:24,429 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:45:24,435 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:45:24,435 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:45:24,440 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:45:24,446 [ scc.git] DEBUG Already up to date. 2024-04-06 00:45:24,446 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-04-06 00:45:24,840 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-04-06 00:45:24,841 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-04-06 00:45:24,846 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:45:24,846 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:24,847 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:24,853 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-04-06 00:45:24,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:24,867 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-04-06 00:45:24,879 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:45:24,882 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-04-06 00:45:24,882 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-04-06 00:45:24,882 [ scc.git] DEBUG requirements.txt | 2 +- 2024-04-06 00:45:24,882 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-04-06 00:45:24,882 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-04-06 00:45:24,882 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-04-06 00:45:25,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:45:25,040 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:45:25,081 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:25,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:25,087 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:45:25,127 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:45:25,135 [ scc.git] DEBUG has no local changes 2024-04-06 00:45:25,135 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:45:25,145 [ scc.git] DEBUG [detached HEAD 203af12] merge master -Dorg -Ssuccess-only 2024-04-06 00:45:25,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:45:25,145 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:45:25,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-04-06 00:45:26,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-04-06 00:45:26,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-04-06 00:45:27,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-04-06 00:45:27,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:45:28,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-04-06 00:45:28,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:45:28,443 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-04-06 00:45:28,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-04-06 00:45:29,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-04-06 00:45:29,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-04-06 00:45:30,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:45:30,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-04-06 00:45:31,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:45:31,297 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-04-06 00:45:31,297 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:45:31,297 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-06 00:45:31,297 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:31,297 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:31,304 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:45:31,309 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:45:31,310 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:45:31,317 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:45:31,324 [ scc.git] DEBUG Already up to date. 2024-04-06 00:45:31,324 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-04-06 00:45:31,969 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-04-06 00:45:31,970 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-04-06 00:45:31,976 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-04-06 00:45:32,712 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-04-06 00:45:32,712 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-04-06 00:45:32,717 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:45:32,718 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:32,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:32,724 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-06 00:45:32,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:32,738 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-06 00:45:32,817 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-04-06 00:45:32,817 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-04-06 00:45:32,817 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-04-06 00:45:32,817 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-04-06 00:45:32,818 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-06 00:45:32,819 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-06 00:45:32,827 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-06 00:45:32,834 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-06 00:45:32,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:45:32,998 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-06 00:45:33,007 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-06 00:45:33,016 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-04-06 00:45:33,023 [ scc.config] DEBUG Found github.token 2024-04-06 00:45:33,023 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-04-06 00:45:33,023 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-06 00:45:33,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:33,040 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-06 00:45:33,078 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-04-06 00:45:33,078 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-04-06 00:45:33,078 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-04-06 00:45:33,078 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-06 00:45:33,079 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-06 00:45:33,088 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-06 00:45:33,099 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-06 00:45:33,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:45:33,408 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-06 00:45:33,416 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-06 00:45:33,423 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-04-06 00:45:33,430 [ scc.config] DEBUG Found github.token 2024-04-06 00:45:33,430 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-04-06 00:45:33,430 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:45:33,474 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:33,475 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:33,482 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:45:33,528 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:45:33,535 [ scc.git] DEBUG has no local changes 2024-04-06 00:45:33,535 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:45:33,545 [ scc.git] DEBUG [detached HEAD 9345915] merge master -Dorg -Ssuccess-only 2024-04-06 00:45:33,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:45:33,545 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:45:33,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-04-06 00:45:34,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-04-06 00:45:34,426 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-06 00:45:34,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-04-06 00:45:35,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:45:35,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-06 00:45:36,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-04-06 00:45:36,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:45:36,830 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-04-06 00:45:37,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-04-06 00:45:37,287 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-06 00:45:37,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-04-06 00:45:38,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:45:38,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-06 00:45:39,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-04-06 00:45:39,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:45:39,733 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-04-06 00:45:40,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-04-06 00:45:40,195 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-06 00:45:40,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-04-06 00:45:41,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:45:41,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-06 00:45:42,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-04-06 00:45:42,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:45:42,706 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-04-06 00:45:43,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-04-06 00:45:43,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-04-06 00:45:44,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-04-06 00:45:44,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-04-06 00:45:45,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-04-06 00:45:45,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-04-06 00:45:45,529 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:45:45,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-06 00:45:45,529 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:45,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:45,535 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:45:45,540 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:45:45,540 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:45:45,547 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:45:45,554 [ scc.git] DEBUG Already up to date. 2024-04-06 00:45:45,554 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-04-06 00:45:45,949 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-06 00:45:45,949 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-04-06 00:45:45,956 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-04-06 00:45:46,382 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-06 00:45:46,382 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-04-06 00:45:46,387 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-04-06 00:45:46,795 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-06 00:45:46,795 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-04-06 00:45:46,807 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:45:46,807 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:46,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:46,816 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-04-06 00:45:46,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:46,828 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-04-06 00:45:46,837 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:45:46,840 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-04-06 00:45:46,840 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-04-06 00:45:47,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:45:47,002 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-04-06 00:45:47,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:47,015 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-04-06 00:45:47,075 [ scc.git] DEBUG Auto-merging package-lock.json 2024-04-06 00:45:47,075 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:45:47,078 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-04-06 00:45:47,078 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-04-06 00:45:47,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:45:47,408 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-04-06 00:45:47,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:47,421 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-04-06 00:45:47,445 [ scc.git] DEBUG Auto-merging package-lock.json 2024-04-06 00:45:47,445 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:45:47,449 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-04-06 00:45:47,449 [ scc.git] DEBUG package.json | 2 +- 2024-04-06 00:45:47,449 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-04-06 00:45:47,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:45:47,827 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:45:47,866 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:47,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:47,872 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:45:47,911 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:45:47,919 [ scc.git] DEBUG has no local changes 2024-04-06 00:45:47,919 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:45:47,929 [ scc.git] DEBUG [detached HEAD 2cecb78] merge master -Dorg -Ssuccess-only 2024-04-06 00:45:47,930 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:45:47,930 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:45:48,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-04-06 00:45:48,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-04-06 00:45:49,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-04-06 00:45:49,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:45:50,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-04-06 00:45:50,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:45:50,656 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-04-06 00:45:50,656 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:45:50,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-06 00:45:50,656 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:50,656 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:50,663 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:45:50,668 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:45:50,668 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:45:50,675 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:45:50,681 [ scc.git] DEBUG Already up to date. 2024-04-06 00:45:50,681 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-04-06 00:45:51,067 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-04-06 00:45:51,067 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-04-06 00:45:51,072 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:45:51,072 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:51,072 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:51,077 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-04-06 00:45:51,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:51,088 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-04-06 00:45:51,097 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:45:51,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:45:51,251 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:45:51,294 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:51,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:51,299 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:45:51,339 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:45:51,345 [ scc.git] DEBUG has no local changes 2024-04-06 00:45:51,346 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:45:51,354 [ scc.git] DEBUG [detached HEAD 63c80a0] merge master -Dorg -Ssuccess-only 2024-04-06 00:45:51,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:45:51,354 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:45:51,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-04-06 00:45:52,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-04-06 00:45:52,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-04-06 00:45:53,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-04-06 00:45:53,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-04-06 00:45:54,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:45:54,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-04-06 00:45:54,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:45:54,993 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-04-06 00:45:54,993 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:45:54,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-06 00:45:54,993 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:54,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:54,999 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:45:55,005 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:45:55,005 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:45:55,011 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:45:55,018 [ scc.git] DEBUG Already up to date. 2024-04-06 00:45:55,018 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-04-06 00:45:55,528 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-04-06 00:45:55,528 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-04-06 00:45:55,535 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:45:55,535 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:55,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:55,542 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-04-06 00:45:55,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:55,559 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-04-06 00:45:55,570 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-04-06 00:45:55,571 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:45:55,573 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-04-06 00:45:55,573 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-04-06 00:45:55,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:45:55,734 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:45:55,778 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:55,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:55,785 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:45:55,840 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:45:55,849 [ scc.git] DEBUG has no local changes 2024-04-06 00:45:55,849 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:45:55,861 [ scc.git] DEBUG [detached HEAD c23da61] merge master -Dorg -Ssuccess-only 2024-04-06 00:45:55,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:45:55,862 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:45:56,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-04-06 00:45:56,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-04-06 00:45:57,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-04-06 00:45:57,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-04-06 00:45:58,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:45:58,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-04-06 00:45:59,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:45:59,014 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-04-06 00:45:59,014 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:45:59,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-06 00:45:59,014 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:59,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:59,020 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:45:59,026 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:45:59,026 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:45:59,032 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:45:59,039 [ scc.git] DEBUG Already up to date. 2024-04-06 00:45:59,039 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-04-06 00:45:59,534 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-04-06 00:45:59,534 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-04-06 00:45:59,540 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:45:59,541 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:59,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:59,548 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-06 00:45:59,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:59,565 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-06 00:45:59,630 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-04-06 00:45:59,630 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-04-06 00:45:59,630 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-04-06 00:45:59,630 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-04-06 00:45:59,631 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-04-06 00:45:59,631 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-04-06 00:45:59,631 [ scc.git] DEBUG Auto-merging setup.py 2024-04-06 00:45:59,631 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-04-06 00:45:59,631 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-06 00:45:59,631 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-06 00:45:59,640 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-04-06 00:45:59,650 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-04-06 00:45:59,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:45:59,814 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-06 00:45:59,821 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-04-06 00:45:59,829 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/urls.py - omero_signup/signup_settings.py - setup.py --conflicts 2024-04-06 00:45:59,835 [ scc.config] DEBUG Found github.token 2024-04-06 00:45:59,836 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-04-06 00:45:59,836 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:45:59,881 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:45:59,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:45:59,889 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:45:59,943 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:45:59,952 [ scc.git] DEBUG has no local changes 2024-04-06 00:45:59,952 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:45:59,967 [ scc.git] DEBUG [detached HEAD 536f943] merge master -Dorg -Ssuccess-only 2024-04-06 00:45:59,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:45:59,968 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:46:00,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-04-06 00:46:00,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-04-06 00:46:01,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-04-06 00:46:01,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-04-06 00:46:02,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:46:02,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-04-06 00:46:03,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:46:03,139 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-04-06 00:46:03,139 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:46:03,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-06 00:46:03,139 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:03,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:03,145 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:46:03,150 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:46:03,150 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:46:03,156 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:46:03,163 [ scc.git] DEBUG Already up to date. 2024-04-06 00:46:03,163 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-04-06 00:46:03,622 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-04-06 00:46:03,622 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-04-06 00:46:03,628 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:46:03,628 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:03,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:03,635 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-04-06 00:46:03,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:03,648 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-04-06 00:46:03,827 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-06 00:46:03,830 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-04-06 00:46:03,830 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-04-06 00:46:03,830 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-04-06 00:46:03,830 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-04-06 00:46:03,830 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-04-06 00:46:03,832 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-04-06 00:46:03,832 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-04-06 00:46:03,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-04-06 00:46:03,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-04-06 00:46:03,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-04-06 00:46:03,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-04-06 00:46:03,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-04-06 00:46:03,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-04-06 00:46:03,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-04-06 00:46:03,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-04-06 00:46:03,833 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-04-06 00:46:03,833 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-04-06 00:46:03,833 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-04-06 00:46:03,834 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-04-06 00:46:03,834 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-04-06 00:46:03,834 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-04-06 00:46:03,834 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-04-06 00:46:03,834 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-04-06 00:46:03,834 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-04-06 00:46:03,835 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-04-06 00:46:03,835 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-04-06 00:46:03,835 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-04-06 00:46:03,835 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-04-06 00:46:03,835 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-04-06 00:46:03,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:03,983 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:46:04,028 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:04,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:04,036 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:46:04,076 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:46:04,083 [ scc.git] DEBUG has no local changes 2024-04-06 00:46:04,083 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:46:04,092 [ scc.git] DEBUG [detached HEAD 030df4b] merge master -Dorg -Ssuccess-only 2024-04-06 00:46:04,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:04,092 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:46:04,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-04-06 00:46:04,401 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:46:04,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-06 00:46:04,402 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:04,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:04,408 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:46:04,413 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:46:04,413 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:46:04,418 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:46:04,424 [ scc.git] DEBUG Already up to date. 2024-04-06 00:46:04,424 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:46:04,424 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:04,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:04,430 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:46:04,473 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:04,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:04,479 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:46:04,521 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:46:04,528 [ scc.git] DEBUG has no local changes 2024-04-06 00:46:04,529 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:46:04,538 [ scc.git] DEBUG [detached HEAD ae900e4] merge master -Dorg -Ssuccess-only 2024-04-06 00:46:04,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:04,539 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:46:04,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-04-06 00:46:04,828 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:46:04,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-06 00:46:04,828 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:04,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:04,834 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:46:04,839 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:46:04,840 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:46:04,845 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:46:04,852 [ scc.git] DEBUG Already up to date. 2024-04-06 00:46:04,852 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:46:04,852 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:04,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:04,859 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:46:04,903 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:04,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:04,910 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:46:04,957 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:46:04,964 [ scc.git] DEBUG has no local changes 2024-04-06 00:46:04,964 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:46:04,973 [ scc.git] DEBUG [detached HEAD ba90f4b] merge master -Dorg -Ssuccess-only 2024-04-06 00:46:04,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:04,973 [ scc.git] INFO Overriding base-branch from master to main 2024-04-06 00:46:04,973 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:46:05,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-04-06 00:46:05,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-04-06 00:46:06,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-04-06 00:46:06,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-04-06 00:46:07,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-04-06 00:46:07,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:46:08,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-06 00:46:08,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-04-06 00:46:09,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:46:09,069 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-04-06 00:46:09,069 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:46:09,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-06 00:46:09,069 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:09,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:09,076 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-04-06 00:46:09,083 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:46:09,083 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-04-06 00:46:09,090 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-04-06 00:46:09,097 [ scc.git] DEBUG Already up to date. 2024-04-06 00:46:09,097 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-04-06 00:46:09,518 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-04-06 00:46:09,519 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-04-06 00:46:09,524 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:46:09,524 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:09,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:09,530 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-06 00:46:09,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:09,541 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-06 00:46:09,598 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-04-06 00:46:09,598 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-04-06 00:46:09,598 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-06 00:46:09,598 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-06 00:46:09,604 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-04-06 00:46:09,610 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-04-06 00:46:09,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:09,777 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-06 00:46:09,783 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-04-06 00:46:09,789 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-04-06 00:46:09,794 [ scc.config] DEBUG Found github.token 2024-04-06 00:46:09,794 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-04-06 00:46:09,794 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:46:09,834 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:09,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:09,839 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:46:09,876 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:46:09,883 [ scc.git] DEBUG has no local changes 2024-04-06 00:46:09,883 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:46:09,891 [ scc.git] DEBUG [detached HEAD 71864a3] merge master -Dorg -Ssuccess-only 2024-04-06 00:46:09,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:09,892 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:46:10,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-04-06 00:46:10,201 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:46:10,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-06 00:46:10,202 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:10,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:10,208 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:46:10,213 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:46:10,213 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:46:10,219 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:46:10,226 [ scc.git] DEBUG Already up to date. 2024-04-06 00:46:10,227 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:46:10,227 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:10,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:10,232 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:46:10,271 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:10,271 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:10,277 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:46:10,316 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:46:10,323 [ scc.git] DEBUG has no local changes 2024-04-06 00:46:10,323 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:46:10,331 [ scc.git] DEBUG [detached HEAD 5d8846b] merge master -Dorg -Ssuccess-only 2024-04-06 00:46:10,332 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:10,332 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:46:10,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-04-06 00:46:10,638 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:46:10,638 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-06 00:46:10,638 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:10,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:10,644 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:46:10,649 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:46:10,650 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:46:10,656 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:46:10,662 [ scc.git] DEBUG Already up to date. 2024-04-06 00:46:10,662 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:46:10,662 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:10,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:10,667 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:46:10,707 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:10,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:10,713 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:46:10,752 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:46:10,759 [ scc.git] DEBUG has no local changes 2024-04-06 00:46:10,759 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:46:10,767 [ scc.git] DEBUG [detached HEAD 575edfc] merge master -Dorg -Ssuccess-only 2024-04-06 00:46:10,768 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:10,768 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:46:11,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-04-06 00:46:11,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-04-06 00:46:12,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-04-06 00:46:12,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-04-06 00:46:12,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:46:13,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-04-06 00:46:13,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:46:13,855 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-04-06 00:46:13,855 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:46:13,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-06 00:46:13,855 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:13,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:13,862 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-06 00:46:13,867 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:46:13,867 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-06 00:46:13,874 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-06 00:46:13,880 [ scc.git] DEBUG Already up to date. 2024-04-06 00:46:13,880 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-04-06 00:46:14,389 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-04-06 00:46:14,389 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-04-06 00:46:14,396 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:46:14,397 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:14,397 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:14,404 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-06 00:46:14,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:14,415 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-06 00:46:14,448 [ scc.git] DEBUG Auto-merging Dockerfile 2024-04-06 00:46:14,448 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-04-06 00:46:14,448 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-06 00:46:14,449 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-06 00:46:14,458 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-04-06 00:46:14,471 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-04-06 00:46:14,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:14,611 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-06 00:46:14,618 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-04-06 00:46:14,626 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-04-06 00:46:14,633 [ scc.config] DEBUG Found github.token 2024-04-06 00:46:14,634 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-04-06 00:46:14,634 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:46:14,687 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:14,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:14,695 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:46:14,741 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:46:14,749 [ scc.git] DEBUG has no local changes 2024-04-06 00:46:14,750 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:46:14,761 [ scc.git] DEBUG [detached HEAD dab044e] merge master -Dorg -Ssuccess-only 2024-04-06 00:46:14,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:14,761 [ scc.git] INFO Overriding base-branch from master to develop 2024-04-06 00:46:14,761 [ scc.repo] DEBUG ## PRs found: 2024-04-06 00:46:15,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-04-06 00:46:15,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-04-06 00:46:16,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-04-06 00:46:16,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-04-06 00:46:17,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-04-06 00:46:17,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-04-06 00:46:18,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-04-06 00:46:18,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-04-06 00:46:18,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-06 00:46:19,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-04-06 00:46:19,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-04-06 00:46:19,789 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-04-06 00:46:20,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-04-06 00:46:20,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-04-06 00:46:21,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-04-06 00:46:21,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-04-06 00:46:21,683 [ scc.repo] DEBUG ## Branches found: 2024-04-06 00:46:21,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-06 00:46:21,683 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:21,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:21,689 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-04-06 00:46:21,694 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-06 00:46:21,695 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-04-06 00:46:21,700 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-04-06 00:46:21,706 [ scc.git] DEBUG Already up to date. 2024-04-06 00:46:21,706 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-04-06 00:46:22,137 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-04-06 00:46:22,137 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-04-06 00:46:22,143 [ scc.git] DEBUG ## Unique users: [] 2024-04-06 00:46:22,143 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:22,143 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:22,150 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-06 00:46:22,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:22,162 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-06 00:46:22,206 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-04-06 00:46:22,206 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-04-06 00:46:22,206 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-06 00:46:22,207 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-06 00:46:22,213 [ scc.git] DEBUG Calling 'git reset --hard 2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-04-06 00:46:22,219 [ scc.git] DEBUG HEAD is now at 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-04-06 00:46:22,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:22,384 [ scc.git] DEBUG Calling 'git merge-base 2078ac72dbf11f2733e685000a274eff81c2ac2d 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-06 00:46:22,393 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-04-06 00:46:22,401 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#23](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-04-06 00:46:22,407 [ scc.config] DEBUG Found github.token 2024-04-06 00:46:22,407 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-04-06 00:46:22,408 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-06 00:46:22,455 [ scc.git] DEBUG Get sha1 of %s 2024-04-06 00:46:22,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-06 00:46:22,462 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:46:22,505 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:46:22,512 [ scc.git] DEBUG has no local changes 2024-04-06 00:46:22,512 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:46:22,522 [ scc.git] DEBUG [detached HEAD a3f3fb4] merge master -Dorg -Ssuccess-only 2024-04-06 00:46:22,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:22,522 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-06 00:46:22,606 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-04-06 00:46:22,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:22,793 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-04-06 00:46:22,798 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-04-06 00:46:23,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:23,203 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-04-06 00:46:23,209 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-04-06 00:46:23,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:23,610 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-04-06 00:46:23,616 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-04-06 00:46:24,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:24,022 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-04-06 00:46:24,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:24,421 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-04-06 00:46:24,426 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-04-06 00:46:24,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:24,823 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-04-06 00:46:24,829 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-04-06 00:46:25,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:25,231 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-04-06 00:46:25,237 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-04-06 00:46:25,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:25,645 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-04-06 00:46:25,651 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-04-06 00:46:26,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:26,058 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-04-06 00:46:26,064 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-04-06 00:46:26,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:26,484 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-04-06 00:46:26,489 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-04-06 00:46:26,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:26,898 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-04-06 00:46:26,905 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-04-06 00:46:27,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:27,296 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-04-06 00:46:27,303 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-04-06 00:46:27,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:27,701 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-04-06 00:46:28,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:28,109 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-04-06 00:46:28,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:28,504 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-04-06 00:46:28,509 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-04-06 00:46:28,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:28,915 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-04-06 00:46:29,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:29,317 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-04-06 00:46:29,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:29,710 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-04-06 00:46:29,715 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-04-06 00:46:30,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:30,129 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-04-06 00:46:30,134 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-04-06 00:46:30,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:30,529 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-04-06 00:46:30,535 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-04-06 00:46:30,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:30,953 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-04-06 00:46:30,960 [ scc.config] DEBUG Found submodule.scripts.url 2024-04-06 00:46:31,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-06 00:46:31,359 [ scc.config] DEBUG Found submodule.scripts.branch 2024-04-06 00:46:31,359 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-06 00:46:31,439 [ scc.git] DEBUG has local changes 2024-04-06 00:46:31,439 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 477 will-moore 'Vite' - PR 548 will-moore 'Fix cropping of panel labels and float usage for shape labels' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 456 will-moore 'Don't use tiles for non-big movies' - PR 460 will-moore 'Channel min spinner fix' - PR 464 will-moore 'Tile load error warning' - PR 465 will-moore 'Save as Figure' - PR 467 dependabot[bot] 'Bump webpack-dev-middleware from 5.3.3 to 5.3.4' - PR 468 dependabot[bot] 'Bump express from 4.18.2 to 4.19.2' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#23 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/23/)' 2024-04-06 00:46:31,454 [ scc.git] DEBUG [detached HEAD 35edc05] merge master -Dorg -Ssuccess-only 2024-04-06 00:46:31,454 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-04-06 00:46:31,454 [ scc.merge] INFO Repository: ome/omero-plugins 2024-04-06 00:46:31,454 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,454 [ scc.merge] INFO 2024-04-06 00:46:31,454 [ scc.merge] INFO 2024-04-06 00:46:31,454 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-04-06 00:46:31,454 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,454 [ scc.merge] INFO 2024-04-06 00:46:31,454 [ scc.merge] INFO 2024-04-06 00:46:31,454 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-04-06 00:46:31,454 [ scc.merge] INFO Excluded PRs: 2024-04-06 00:46:31,454 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-04-06 00:46:31,454 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,454 [ scc.merge] INFO 2024-04-06 00:46:31,454 [ scc.merge] INFO Merged PRs: 2024-04-06 00:46:31,455 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-04-06 00:46:31,455 [ scc.merge] INFO 2024-04-06 00:46:31,455 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-04-06 00:46:31,455 [ scc.merge] INFO Excluded PRs: 2024-04-06 00:46:31,455 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-04-06 00:46:31,455 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-04-06 00:46:31,455 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-04-06 00:46:31,455 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-04-06 00:46:31,455 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,455 [ scc.merge] INFO 2024-04-06 00:46:31,455 [ scc.merge] INFO Merged PRs: 2024-04-06 00:46:31,455 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-04-06 00:46:31,455 [ scc.merge] INFO 2024-04-06 00:46:31,455 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-04-06 00:46:31,455 [ scc.merge] INFO Excluded PRs: 2024-04-06 00:46:31,455 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-04-06 00:46:31,455 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-04-06 00:46:31,455 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,455 [ scc.merge] INFO 2024-04-06 00:46:31,455 [ scc.merge] INFO Merged PRs: 2024-04-06 00:46:31,455 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-04-06 00:46:31,455 [ scc.merge] INFO 2024-04-06 00:46:31,455 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-06 00:46:31,455 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-04-06 00:46:31,455 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-04-06 00:46:31,455 [ scc.merge] INFO 2024-04-06 00:46:31,455 [ scc.merge] INFO Repository: ome/omero-figure 2024-04-06 00:46:31,455 [ scc.merge] INFO Excluded PRs: 2024-04-06 00:46:31,455 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (stage: draft) 2024-04-06 00:46:31,455 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,455 [ scc.merge] INFO 2024-04-06 00:46:31,455 [ scc.merge] INFO Merged PRs: 2024-04-06 00:46:31,455 [ scc.merge] INFO - PR 477 will-moore 'Vite' 2024-04-06 00:46:31,456 [ scc.merge] INFO - PR 548 will-moore 'Fix cropping of panel labels and float usage for shape labels' 2024-04-06 00:46:31,456 [ scc.merge] INFO 2024-04-06 00:46:31,456 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-04-06 00:46:31,456 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,456 [ scc.merge] INFO 2024-04-06 00:46:31,456 [ scc.merge] INFO Merged PRs: 2024-04-06 00:46:31,456 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-04-06 00:46:31,456 [ scc.merge] INFO 2024-04-06 00:46:31,456 [ scc.merge] INFO Repository: ome/omero-gallery 2024-04-06 00:46:31,456 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,456 [ scc.merge] INFO 2024-04-06 00:46:31,456 [ scc.merge] INFO Merged PRs: 2024-04-06 00:46:31,456 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-04-06 00:46:31,456 [ scc.merge] INFO 2024-04-06 00:46:31,456 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-04-06 00:46:31,456 [ scc.merge] INFO Excluded PRs: 2024-04-06 00:46:31,456 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-04-06 00:46:31,456 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-04-06 00:46:31,456 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,456 [ scc.merge] INFO 2024-04-06 00:46:31,456 [ scc.merge] INFO Merged PRs: 2024-04-06 00:46:31,456 [ scc.merge] INFO - PR 456 will-moore 'Don't use tiles for non-big movies' 2024-04-06 00:46:31,456 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-04-06 00:46:31,456 [ scc.merge] INFO - PR 464 will-moore 'Tile load error warning' 2024-04-06 00:46:31,456 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-04-06 00:46:31,456 [ scc.merge] INFO - PR 467 dependabot[bot] 'Bump webpack-dev-middleware from 5.3.3 to 5.3.4' 2024-04-06 00:46:31,456 [ scc.merge] INFO - PR 468 dependabot[bot] 'Bump express from 4.18.2 to 4.19.2' 2024-04-06 00:46:31,456 [ scc.merge] INFO 2024-04-06 00:46:31,456 [ scc.merge] INFO Repository: ome/omero-mapr 2024-04-06 00:46:31,456 [ scc.merge] INFO Excluded PRs: 2024-04-06 00:46:31,456 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-04-06 00:46:31,456 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,456 [ scc.merge] INFO 2024-04-06 00:46:31,456 [ scc.merge] INFO Merged PRs: 2024-04-06 00:46:31,456 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-04-06 00:46:31,456 [ scc.merge] INFO 2024-04-06 00:46:31,457 [ scc.merge] INFO Repository: ome/omero-metadata 2024-04-06 00:46:31,457 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,457 [ scc.merge] INFO 2024-04-06 00:46:31,457 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-06 00:46:31,457 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-04-06 00:46:31,457 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-04-06 00:46:31,457 [ scc.merge] INFO 2024-04-06 00:46:31,457 [ scc.merge] INFO Repository: ome/omero-parade 2024-04-06 00:46:31,457 [ scc.merge] INFO Excluded PRs: 2024-04-06 00:46:31,457 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-04-06 00:46:31,457 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-04-06 00:46:31,457 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-04-06 00:46:31,457 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,457 [ scc.merge] INFO 2024-04-06 00:46:31,457 [ scc.merge] INFO Merged PRs: 2024-04-06 00:46:31,457 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-04-06 00:46:31,457 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-04-06 00:46:31,457 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-04-06 00:46:31,457 [ scc.merge] INFO 2024-04-06 00:46:31,457 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-04-06 00:46:31,457 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,457 [ scc.merge] INFO 2024-04-06 00:46:31,457 [ scc.merge] INFO Merged PRs: 2024-04-06 00:46:31,457 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-04-06 00:46:31,457 [ scc.merge] INFO 2024-04-06 00:46:31,457 [ scc.merge] INFO Repository: ome/omero-rois 2024-04-06 00:46:31,457 [ scc.merge] INFO Excluded PRs: 2024-04-06 00:46:31,457 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-04-06 00:46:31,457 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,457 [ scc.merge] INFO 2024-04-06 00:46:31,457 [ scc.merge] INFO Merged PRs: 2024-04-06 00:46:31,457 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-04-06 00:46:31,457 [ scc.merge] INFO 2024-04-06 00:46:31,457 [ scc.merge] INFO Repository: ome/omero-signup 2024-04-06 00:46:31,457 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,457 [ scc.merge] INFO 2024-04-06 00:46:31,457 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-06 00:46:31,458 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-04-06 00:46:31,458 [ scc.merge] INFO 2024-04-06 00:46:31,458 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-04-06 00:46:31,458 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,458 [ scc.merge] INFO 2024-04-06 00:46:31,458 [ scc.merge] INFO Merged PRs: 2024-04-06 00:46:31,458 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-04-06 00:46:31,458 [ scc.merge] INFO 2024-04-06 00:46:31,458 [ scc.merge] INFO Repository: ome/omero-upload 2024-04-06 00:46:31,458 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,458 [ scc.merge] INFO 2024-04-06 00:46:31,458 [ scc.merge] INFO 2024-04-06 00:46:31,458 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-04-06 00:46:31,458 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,458 [ scc.merge] INFO 2024-04-06 00:46:31,458 [ scc.merge] INFO 2024-04-06 00:46:31,458 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-04-06 00:46:31,458 [ scc.merge] INFO Excluded PRs: 2024-04-06 00:46:31,458 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-04-06 00:46:31,458 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,458 [ scc.merge] INFO 2024-04-06 00:46:31,458 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-06 00:46:31,458 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-04-06 00:46:31,458 [ scc.merge] INFO 2024-04-06 00:46:31,458 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-04-06 00:46:31,458 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,458 [ scc.merge] INFO 2024-04-06 00:46:31,458 [ scc.merge] INFO 2024-04-06 00:46:31,458 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-04-06 00:46:31,458 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,458 [ scc.merge] INFO 2024-04-06 00:46:31,458 [ scc.merge] INFO 2024-04-06 00:46:31,458 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-04-06 00:46:31,458 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,458 [ scc.merge] INFO 2024-04-06 00:46:31,458 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-06 00:46:31,458 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-04-06 00:46:31,459 [ scc.merge] INFO 2024-04-06 00:46:31,459 [ scc.merge] INFO Repository: ome/scripts 2024-04-06 00:46:31,459 [ scc.merge] INFO Excluded PRs: 2024-04-06 00:46:31,459 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-04-06 00:46:31,459 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-04-06 00:46:31,459 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-04-06 00:46:31,459 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-04-06 00:46:31,459 [ scc.merge] INFO Already up to date. 2024-04-06 00:46:31,459 [ scc.merge] INFO 2024-04-06 00:46:31,459 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-06 00:46:31,459 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-04-06 00:46:31,459 [ scc.merge] INFO 2024-04-06 00:46:31,459 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-04-06 00:46:31,459 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-06 00:46:31,465 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-06 00:46:31,471 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-06 00:46:31,476 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-06 00:46:31,480 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-06 00:46:31,485 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-06 00:46:31,490 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-06 00:46:31,495 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-06 00:46:31,499 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-06 00:46:31,504 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-06 00:46:31,509 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-06 00:46:31,514 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-06 00:46:31,519 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-06 00:46:31,524 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-06 00:46:31,529 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-06 00:46:31,534 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-06 00:46:31,540 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-06 00:46:31,545 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,550 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,550 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-06 00:46:31,550 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-06 00:46:31,555 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-06 00:46:31,560 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-06 00:46:31,566 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-06 00:46:31,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-06 00:46:31,570 [ scc.git] DEBUG Calling 'git remote' 2024-04-06 00:46:31,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.8.2 to 5.9.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 2ac2927] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 3b7ccfa8 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a232ed0 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from a0148a6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 2078ac7 nothing to commit, working tree clean [detached HEAD e7a3405] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-06 00:47:17,068 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-06 00:47:26,011 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-06 00:47:28,355 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-06 00:47:32,838 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-06 00:48:23,634 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS