![[Jenkins]](/jenkins/static/28c89a1b/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 301 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision d7306c25e4072a4dbff09e04807c26f407f6da90 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f d7306c25e4072a4dbff09e04807c26f407f6da90 # timeout=10 Commit message: "Merge pull request #411 from ome/dependabot/submodules/omero-figure-1dfb138" > git rev-list --no-walk fa96199a010876372e5f8a6d8ad1a96e00b44f43 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 264 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.15-py2.py3-none-any.whl.metadata (5.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.15-py2.py3-none-any.whl (9.9 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.15 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-44.0.0 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-12-06 00:42:55,581 [ scc.config] DEBUG Found github.token 2024-12-06 00:42:55,585 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-06 00:42:55,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:42:56,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:42:56,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-06 00:42:56,601 [ scc.gh] DEBUG 4086 remaining from 5000 (Reset at 00:12 2024-12-06 00:42:56,602 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:42:56,607 [ scc.git] DEBUG Check current status 2024-12-06 00:42:56,607 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:42:56,611 [ scc.git] DEBUG d7306c2 Merge pull request #411 from ome/dependabot/submodules/omero-figure-1dfb138 2024-12-06 00:42:56,611 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:42:56,739 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (heads/master-3-g4628e82) 2024-12-06 00:42:56,742 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-12-06 00:42:57,269 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-06 00:42:57,279 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-12-06 00:42:57,284 [ scc.git] DEBUG 1dfb1389e449594defce3d4ac9f72df3fefb6e89 omero-figure (v7.1.0-235-g1dfb1389) 2024-12-06 00:42:57,286 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-12-06 00:42:57,515 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-06 00:42:57,519 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-06 00:42:57,522 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-06 00:42:57,525 [ scc.git] DEBUG fc2095901f5dfd24ecd29a99092283f136de04d5 omero-metadata (v0.13.0-1-gfc20959) 2024-12-06 00:42:57,528 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-12-06 00:42:57,530 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-06 00:42:57,533 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-06 00:42:57,536 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-06 00:42:57,557 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-06 00:42:57,560 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-12-06 00:42:57,563 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-06 00:42:57,565 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-06 00:42:57,568 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-12-06 00:42:57,571 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-12-06 00:42:57,573 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-06 00:42:57,577 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-06 00:42:57,581 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:42:57,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-12-06 00:42:58,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:42:58,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:42:59,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:42:59,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:42:59,605 [ scc.git] DEBUG Resetting... 2024-12-06 00:42:59,605 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-06 00:42:59,614 [ scc.git] DEBUG HEAD is now at d7306c2 Merge pull request #411 from ome/dependabot/submodules/omero-figure-1dfb138 2024-12-06 00:42:59,614 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-06 00:42:59,713 [ scc.git] DEBUG Check current status 2024-12-06 00:42:59,713 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:42:59,718 [ scc.git] DEBUG d7306c2 Merge pull request #411 from ome/dependabot/submodules/omero-figure-1dfb138 2024-12-06 00:42:59,718 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:42:59,765 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (heads/master-3-g4628e82) 2024-12-06 00:42:59,768 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-12-06 00:42:59,771 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-06 00:42:59,773 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-12-06 00:42:59,778 [ scc.git] DEBUG 1dfb1389e449594defce3d4ac9f72df3fefb6e89 omero-figure (v7.1.0-235-g1dfb1389) 2024-12-06 00:42:59,781 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-12-06 00:42:59,784 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-06 00:42:59,787 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-06 00:42:59,790 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-06 00:42:59,793 [ scc.git] DEBUG fc2095901f5dfd24ecd29a99092283f136de04d5 omero-metadata (v0.13.0-1-gfc20959) 2024-12-06 00:42:59,795 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-12-06 00:42:59,798 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-06 00:42:59,801 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-06 00:42:59,803 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-06 00:42:59,807 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-06 00:42:59,809 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-12-06 00:42:59,811 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-06 00:42:59,814 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-06 00:42:59,816 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-12-06 00:42:59,819 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-12-06 00:42:59,822 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-06 00:42:59,825 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-06 00:42:59,826 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-06 00:42:59,826 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-06 00:42:59,826 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-06 00:42:59,826 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-06 00:42:59,827 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-06 00:42:59,827 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:43:00,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-12-06 00:43:00,028 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:43:00,028 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:43:00,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:43:00,033 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:43:00,037 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:43:00,037 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:43:00,041 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:43:00,044 [ scc.git] DEBUG Already up to date. 2024-12-06 00:43:00,044 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:43:00,044 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:43:00,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:43:00,048 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:43:00,097 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:43:00,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:43:00,101 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:43:02,534 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd2a3e37e20> has no local changes 2024-12-06 00:43:02,534 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:43:02,615 [ scc.git] DEBUG [detached HEAD 663080e] merge master -Dorg -Snone 2024-12-06 00:43:02,615 [ scc.merge] INFO Repository: ome/omero-plugins 2024-12-06 00:43:02,615 [ scc.merge] INFO Already up to date. 2024-12-06 00:43:02,615 [ scc.merge] INFO 2024-12-06 00:43:02,615 [ scc.merge] INFO 2024-12-06 00:43:02,615 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-06 00:43:02,615 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'minimal-omero-client': checked out 'ca8c2ea435592cba45b857cc536815b082c5982b' Submodule path 'omero-cli-duplicate': checked out '4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96' Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' Submodule path 'omero-fpbioimage': checked out '3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a' Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' Submodule path 'omero-parade': checked out 'fb5ae86bde41d34018ff4da10991a34b29e61f4b' Submodule path 'omero-upload': checked out '100f6ae42e2c955ffb7cd1e854eb82079476119b' Submodule path 'omero-weberror': checked out '70b01edc650d59445c1b8508e86c29ab069b2b8f' Submodule path 'omero-webtest': checked out '5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-12-06 00:43:12,501 [ scc.config] DEBUG Found github.token 2024-12-06 00:43:12,504 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-06 00:43:12,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:43:13,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:43:13,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-06 00:43:13,490 [ scc.gh] DEBUG 4078 remaining from 5000 (Reset at 00:12 2024-12-06 00:43:13,491 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:13,495 [ scc.git] DEBUG Check current status 2024-12-06 00:43:13,495 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:13,500 [ scc.git] DEBUG 663080e merge master -Dorg -Snone 2024-12-06 00:43:13,500 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:13,551 [ scc.git] DEBUG +ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-06 00:43:13,605 [ scc.git] DEBUG +4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-06 00:43:13,609 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-06 00:43:13,612 [ scc.git] DEBUG +11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-06 00:43:13,617 [ scc.git] DEBUG 1dfb1389e449594defce3d4ac9f72df3fefb6e89 omero-figure (v7.1.0-235-g1dfb1389) 2024-12-06 00:43:13,621 [ scc.git] DEBUG +3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-06 00:43:13,624 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-06 00:43:13,627 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-06 00:43:13,630 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-06 00:43:13,634 [ scc.git] DEBUG +3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-06 00:43:13,750 [ scc.git] DEBUG +fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-06 00:43:13,753 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-06 00:43:13,756 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-06 00:43:13,759 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-06 00:43:13,763 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-06 00:43:13,765 [ scc.git] DEBUG +100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-06 00:43:13,768 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-06 00:43:13,770 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-06 00:43:13,823 [ scc.git] DEBUG +70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-06 00:43:13,827 [ scc.git] DEBUG +5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-06 00:43:13,830 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-06 00:43:13,834 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-06 00:43:13,838 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:13,839 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-12-06 00:43:13,841 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-12-06 00:43:14,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-12-06 00:43:14,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:15,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:15,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:15,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:15,890 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:15,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-06 00:43:15,972 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:15,976 [ scc.git] DEBUG Check current status 2024-12-06 00:43:15,977 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:15,981 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2024-12-06 00:43:15,981 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:16,027 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:16,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-12-06 00:43:16,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:17,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:17,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:18,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:18,039 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:18,088 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:18,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-06 00:43:18,089 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:18,093 [ scc.git] DEBUG Check current status 2024-12-06 00:43:18,094 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:18,098 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2024-12-06 00:43:18,098 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:18,147 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:18,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-12-06 00:43:18,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:19,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:19,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:20,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:20,176 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:20,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:20,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-06 00:43:20,250 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:20,259 [ scc.git] DEBUG Check current status 2024-12-06 00:43:20,259 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:20,266 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2024-12-06 00:43:20,267 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:20,358 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:20,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-12-06 00:43:21,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:21,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:22,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:22,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:22,553 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:22,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:22,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-06 00:43:22,601 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:22,606 [ scc.git] DEBUG Check current status 2024-12-06 00:43:22,606 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:22,611 [ scc.git] DEBUG 11d3587 Merge pull request #165 from jburel/build 2024-12-06 00:43:22,611 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:22,659 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:23,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-12-06 00:43:23,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:23,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:24,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:24,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:24,737 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:24,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:24,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-06 00:43:24,780 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:24,784 [ scc.git] DEBUG Check current status 2024-12-06 00:43:24,784 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:24,789 [ scc.git] DEBUG 1dfb1389 Merge pull request #595 from Rdornier/rotate-90 2024-12-06 00:43:24,790 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:24,838 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:25,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-12-06 00:43:25,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:26,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:26,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:27,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:27,040 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:27,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:27,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-06 00:43:27,086 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:27,092 [ scc.git] DEBUG Check current status 2024-12-06 00:43:27,092 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:27,098 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2024-12-06 00:43:27,098 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:27,148 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:27,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-12-06 00:43:27,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:28,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:28,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:29,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:29,215 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:29,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:29,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-06 00:43:29,261 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:29,266 [ scc.git] DEBUG Check current status 2024-12-06 00:43:29,267 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:29,272 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2024-12-06 00:43:29,272 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:29,317 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:29,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-12-06 00:43:30,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:30,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:30,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:31,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:31,388 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:31,428 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:31,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-06 00:43:31,430 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:31,434 [ scc.git] DEBUG Check current status 2024-12-06 00:43:31,434 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:31,438 [ scc.git] DEBUG b4102d4 add dev 2024-12-06 00:43:31,438 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:31,481 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:31,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-12-06 00:43:32,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:32,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:33,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:33,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:33,547 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:33,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:33,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-06 00:43:33,590 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:33,598 [ scc.git] DEBUG Check current status 2024-12-06 00:43:33,598 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:33,603 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2024-12-06 00:43:33,604 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:33,648 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:34,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-12-06 00:43:34,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:34,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:35,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:35,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:35,716 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:35,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:35,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-06 00:43:35,760 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:35,765 [ scc.git] DEBUG Check current status 2024-12-06 00:43:35,765 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:35,769 [ scc.git] DEBUG 3cd120c Merge pull request #89 from jburel/build 2024-12-06 00:43:35,769 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:35,813 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:36,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-12-06 00:43:36,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:37,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:37,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:37,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:37,978 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:38,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:38,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-06 00:43:38,025 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:38,030 [ scc.git] DEBUG Check current status 2024-12-06 00:43:38,030 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:38,035 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2024-12-06 00:43:38,035 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:38,081 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:38,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-12-06 00:43:38,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:39,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:39,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:40,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:40,134 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:40,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:40,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-06 00:43:40,176 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:40,181 [ scc.git] DEBUG Check current status 2024-12-06 00:43:40,182 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:40,186 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-12-06 00:43:40,186 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:40,233 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:40,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-12-06 00:43:41,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:41,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:41,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:42,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:42,381 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:42,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:42,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-06 00:43:42,444 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:42,451 [ scc.git] DEBUG Check current status 2024-12-06 00:43:42,451 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:42,456 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-12-06 00:43:42,456 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:42,524 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:42,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-12-06 00:43:43,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:43,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:44,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:44,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:44,619 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:44,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:44,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-06 00:43:44,665 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:44,672 [ scc.git] DEBUG Check current status 2024-12-06 00:43:44,672 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:44,680 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-12-06 00:43:44,681 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:44,729 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:45,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-12-06 00:43:45,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:46,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:46,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:46,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:46,821 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:46,865 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:46,867 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-06 00:43:46,867 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:46,872 [ scc.git] DEBUG Check current status 2024-12-06 00:43:46,873 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:46,877 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-12-06 00:43:46,878 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:46,925 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:47,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-06 00:43:47,232 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-06 00:43:47,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-12-06 00:43:47,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:48,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:48,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:49,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:49,196 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:49,235 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:49,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-06 00:43:49,236 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:49,243 [ scc.git] DEBUG Check current status 2024-12-06 00:43:49,243 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:49,248 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2024-12-06 00:43:49,248 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:49,298 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:49,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-12-06 00:43:50,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:50,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:50,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:51,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:51,344 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:51,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:51,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-06 00:43:51,385 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:51,391 [ scc.git] DEBUG Check current status 2024-12-06 00:43:51,391 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:51,396 [ scc.git] DEBUG deab817 update setup-python to v4 2024-12-06 00:43:51,396 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:51,439 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:51,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-12-06 00:43:52,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:52,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:53,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:53,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:53,501 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:53,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:53,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-06 00:43:53,543 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:53,548 [ scc.git] DEBUG Check current status 2024-12-06 00:43:53,549 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:53,553 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-12-06 00:43:53,553 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:53,595 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:53,595 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-12-06 00:43:54,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-12-06 00:43:54,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:54,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:55,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:55,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:55,641 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:55,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:55,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-06 00:43:55,683 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:55,688 [ scc.git] DEBUG Check current status 2024-12-06 00:43:55,689 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:55,693 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2024-12-06 00:43:55,694 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:55,738 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:56,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-06 00:43:56,061 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-06 00:43:56,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-12-06 00:43:56,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:57,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:57,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:43:57,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:43:57,990 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:43:58,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:43:58,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-06 00:43:58,035 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:43:58,041 [ scc.git] DEBUG Check current status 2024-12-06 00:43:58,041 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:43:58,047 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2024-12-06 00:43:58,047 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:43:58,095 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:43:58,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-06 00:43:58,409 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-06 00:43:58,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-12-06 00:43:59,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:43:59,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:43:59,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:44:00,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:44:00,327 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:44:00,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:44:00,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-06 00:44:00,369 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:44:00,375 [ scc.git] DEBUG Check current status 2024-12-06 00:44:00,375 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:44:00,381 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-12-06 00:44:00,381 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:44:00,425 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:44:00,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-12-06 00:44:01,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:44:01,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:44:02,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:44:02,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:44:02,575 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:44:02,622 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:44:02,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-06 00:44:02,624 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-06 00:44:02,630 [ scc.git] DEBUG Check current status 2024-12-06 00:44:02,630 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:44:02,636 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-12-06 00:44:02,636 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:44:02,683 [ scc.config] DEBUG Found remote.origin.url 2024-12-06 00:44:02,683 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-12-06 00:44:02,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-06 00:44:02,990 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-06 00:44:03,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-12-06 00:44:03,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-06 00:44:04,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-06 00:44:04,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-06 00:44:04,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-06 00:44:04,953 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:44:04,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:44:04,997 [ scc.git] DEBUG Resetting... 2024-12-06 00:44:04,997 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-06 00:44:05,007 [ scc.git] DEBUG HEAD is now at 663080e merge master -Dorg -Snone 2024-12-06 00:44:05,007 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-06 00:44:05,056 [ scc.git] DEBUG Submodule path 'minimal-omero-client': checked out '4628e82a32d8af458d9fa621303b24a0a860378f' 2024-12-06 00:44:05,067 [ scc.git] DEBUG Submodule path 'omero-cli-duplicate': checked out '027b3e695d5b225955918c53ef8c81e0d5bc6bf4' 2024-12-06 00:44:05,082 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-12-06 00:44:05,096 [ scc.git] DEBUG Submodule path 'omero-fpbioimage': checked out 'e5b3ca3a5aba41c950d2427b1a05ee0ced55670e' 2024-12-06 00:44:05,116 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out 'fc2095901f5dfd24ecd29a99092283f136de04d5' 2024-12-06 00:44:05,129 [ scc.git] DEBUG Submodule path 'omero-parade': checked out '5d441c250912a98d8a87771f78dde8b54c8e12d6' 2024-12-06 00:44:05,152 [ scc.git] DEBUG Submodule path 'omero-upload': checked out 'aca9e9cad82a08e2e3d37d71cb374b37c90e4693' 2024-12-06 00:44:05,169 [ scc.git] DEBUG Submodule path 'omero-weberror': checked out 'adfa132f23a1b12ca2d2ec53ebba54c760fe2d07' 2024-12-06 00:44:05,180 [ scc.git] DEBUG Submodule path 'omero-webtest': checked out '8da48e116184f1ebb28aa9629748afdfb0282ae5' 2024-12-06 00:44:05,189 [ scc.git] DEBUG Check current status 2024-12-06 00:44:05,189 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-06 00:44:05,194 [ scc.git] DEBUG 663080e merge master -Dorg -Snone 2024-12-06 00:44:05,194 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-06 00:44:05,241 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (heads/master-3-g4628e82) 2024-12-06 00:44:05,243 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-12-06 00:44:05,246 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-06 00:44:05,249 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-12-06 00:44:05,254 [ scc.git] DEBUG 1dfb1389e449594defce3d4ac9f72df3fefb6e89 omero-figure (v7.1.0-235-g1dfb1389) 2024-12-06 00:44:05,256 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-12-06 00:44:05,259 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-06 00:44:05,262 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-06 00:44:05,265 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-06 00:44:05,268 [ scc.git] DEBUG fc2095901f5dfd24ecd29a99092283f136de04d5 omero-metadata (v0.13.0-1-gfc20959) 2024-12-06 00:44:05,270 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-12-06 00:44:05,273 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-06 00:44:05,276 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-06 00:44:05,278 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-06 00:44:05,281 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-06 00:44:05,284 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-12-06 00:44:05,286 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-06 00:44:05,289 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-06 00:44:05,291 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-12-06 00:44:05,293 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-12-06 00:44:05,296 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-06 00:44:05,300 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-06 00:44:05,301 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-06 00:44:05,301 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-06 00:44:05,301 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-06 00:44:05,301 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-06 00:44:05,301 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-06 00:44:05,301 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-12-06 00:44:05,301 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:44:05,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-12-06 00:44:05,471 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:44:05,471 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:05,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:05,477 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:44:05,482 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:44:05,482 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:44:05,488 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:44:05,495 [ scc.git] DEBUG Already up to date. 2024-12-06 00:44:05,495 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:44:05,495 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:05,495 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:05,500 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:44:05,552 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:05,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:05,558 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:44:05,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-12-06 00:44:05,896 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:44:05,896 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-06 00:44:05,896 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:05,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:05,902 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:44:05,908 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:44:05,908 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:44:05,914 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:44:05,967 [ scc.git] DEBUG Updating 4628e82..ca8c2ea 2024-12-06 00:44:06,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls/67 HTTP/1.1" 200 None 2024-12-06 00:44:07,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls/68 HTTP/1.1" 200 None 2024-12-06 00:44:07,267 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:44:07,267 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:07,267 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:07,273 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:44:07,331 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:07,331 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:07,337 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:44:07,381 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:44:07,390 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf59321e50> has no local changes 2024-12-06 00:44:07,391 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Updating 4628e82..ca8c2ea Previously merged: - PR 67 jburel 'Gateway 5.10.0' - PR 68 jburel 'Bump action ' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:44:07,401 [ scc.git] DEBUG [detached HEAD de6e6c0] merge master -Dorg -Ssuccess-only 2024-12-06 00:44:07,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:44:07,401 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:44:07,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-12-06 00:44:08,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-12-06 00:44:08,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-12-06 00:44:08,750 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:44:08,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-06 00:44:08,750 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:08,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:08,757 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:44:08,762 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:44:08,762 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:44:08,768 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:44:08,778 [ scc.git] DEBUG Updating 027b3e6..4777ef8 2024-12-06 00:44:09,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls/27 HTTP/1.1" 200 None 2024-12-06 00:44:10,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls/25 HTTP/1.1" 200 None 2024-12-06 00:44:10,145 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:44:10,145 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:10,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:10,152 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:44:10,202 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:10,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:10,208 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:44:10,253 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:44:10,260 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf59594850> has no local changes 2024-12-06 00:44:10,261 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Updating 027b3e6..4777ef8 Previously merged: - PR 27 jburel 'Build' - PR 25 jburel 'review message' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:44:10,269 [ scc.git] DEBUG [detached HEAD 83071d2] merge master -Dorg -Ssuccess-only 2024-12-06 00:44:10,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:44:10,270 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:44:10,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-12-06 00:44:11,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-12-06 00:44:11,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-12-06 00:44:12,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2024-12-06 00:44:12,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:44:13,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:44:13,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2024-12-06 00:44:14,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:44:14,012 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-12-06 00:44:14,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-12-06 00:44:14,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-12-06 00:44:14,968 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:44:14,968 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-06 00:44:14,968 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:14,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:14,975 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:44:14,980 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:44:14,981 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:44:14,987 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:44:14,993 [ scc.git] DEBUG Already up to date. 2024-12-06 00:44:14,994 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-12-06 00:44:16,407 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-12-06 00:44:16,407 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-12-06 00:44:16,412 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:44:16,412 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:16,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:16,418 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2024-12-06 00:44:16,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:16,431 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2024-12-06 00:44:16,442 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:44:16,445 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2024-12-06 00:44:16,445 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2024-12-06 00:44:16,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:44:16,585 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:44:16,625 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:16,626 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:16,632 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:44:16,677 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:44:16,685 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf58293f40> has no local changes 2024-12-06 00:44:16,685 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:44:16,694 [ scc.git] DEBUG [detached HEAD 2bd2ca4] merge master -Dorg -Ssuccess-only 2024-12-06 00:44:16,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:44:16,694 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:44:17,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-12-06 00:44:17,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-12-06 00:44:18,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-12-06 00:44:18,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-12-06 00:44:19,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-06 00:44:19,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:44:20,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:44:20,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-06 00:44:21,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-12-06 00:44:21,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-06 00:44:21,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-12-06 00:44:21,997 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-12-06 00:44:22,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-12-06 00:44:23,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-12-06 00:44:23,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-12-06 00:44:24,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-12-06 00:44:24,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:44:25,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-12-06 00:44:25,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:44:25,450 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-12-06 00:44:25,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-12-06 00:44:26,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-12-06 00:44:26,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-12-06 00:44:27,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:44:28,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-12-06 00:44:28,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:44:28,466 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-12-06 00:44:28,466 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:44:28,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-06 00:44:28,467 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:28,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:28,474 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:44:28,480 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:44:28,480 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:44:28,486 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:44:28,496 [ scc.git] DEBUG Updating 9b73dd9..11d3587 2024-12-06 00:44:29,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/165 HTTP/1.1" 200 None 2024-12-06 00:44:29,112 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-12-06 00:44:29,525 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-06 00:44:29,525 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-12-06 00:44:29,530 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-12-06 00:44:29,860 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-06 00:44:29,860 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-12-06 00:44:29,865 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-12-06 00:44:30,176 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-06 00:44:30,177 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-12-06 00:44:30,182 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:44:30,182 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:30,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:30,188 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-06 00:44:30,195 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:30,200 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-06 00:44:30,309 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-12-06 00:44:30,310 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-06 00:44:30,310 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-12-06 00:44:30,310 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-06 00:44:30,310 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-06 00:44:30,316 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-06 00:44:30,322 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-12-06 00:44:30,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:44:30,463 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-06 00:44:30,471 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-06 00:44:30,477 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-12-06 00:44:30,483 [ scc.config] DEBUG Found github.token 2024-12-06 00:44:30,483 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-12-06 00:44:30,483 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-06 00:44:30,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:30,495 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-06 00:44:30,518 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-12-06 00:44:30,519 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-12-06 00:44:30,519 [ scc.git] DEBUG Auto-merging setup.py 2024-12-06 00:44:30,519 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-12-06 00:44:30,519 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-06 00:44:30,519 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-12-06 00:44:30,519 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-12-06 00:44:30,519 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-06 00:44:30,519 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-06 00:44:30,525 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-06 00:44:30,532 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-12-06 00:44:30,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:44:30,847 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-06 00:44:30,854 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-06 00:44:30,860 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-12-06 00:44:30,866 [ scc.config] DEBUG Found github.token 2024-12-06 00:44:30,866 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-12-06 00:44:30,866 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-12-06 00:44:30,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:30,878 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-12-06 00:44:30,892 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-12-06 00:44:30,893 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-06 00:44:30,893 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:44:30,897 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-12-06 00:44:30,897 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-12-06 00:44:30,897 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-12-06 00:44:30,897 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-12-06 00:44:30,897 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-12-06 00:44:30,897 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-12-06 00:44:31,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:44:31,232 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:44:31,274 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:31,274 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:31,280 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:44:31,325 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:44:31,333 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf59321e80> has no local changes 2024-12-06 00:44:31,333 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating 9b73dd9..11d3587 Previously merged: - PR 165 jburel 'Build' Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:44:31,343 [ scc.git] DEBUG [detached HEAD e86fc49] merge master -Dorg -Ssuccess-only 2024-12-06 00:44:31,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:44:31,344 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:44:31,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-12-06 00:44:32,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/603 HTTP/1.1" 200 None 2024-12-06 00:44:32,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/603/comments HTTP/1.1" 200 None 2024-12-06 00:44:33,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fb13085761a3cdf782eb6cd7bd820de71a93e7a2 HTTP/1.1" 200 None 2024-12-06 00:44:33,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fb13085761a3cdf782eb6cd7bd820de71a93e7a2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:44:34,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fb13085761a3cdf782eb6cd7bd820de71a93e7a2/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:44:34,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fb13085761a3cdf782eb6cd7bd820de71a93e7a2 HTTP/1.1" 200 None 2024-12-06 00:44:35,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/fb13085761a3cdf782eb6cd7bd820de71a93e7a2?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:44:35,256 [ scc.repo] DEBUG - PR 603 will-moore 'Inset bugfixes' 2024-12-06 00:44:35,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/602 HTTP/1.1" 200 None 2024-12-06 00:44:36,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c0e197bdb6ccbec4030dec0ccf332ab2bf12243a HTTP/1.1" 200 None 2024-12-06 00:44:36,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c0e197bdb6ccbec4030dec0ccf332ab2bf12243a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:44:37,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c0e197bdb6ccbec4030dec0ccf332ab2bf12243a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:44:37,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c0e197bdb6ccbec4030dec0ccf332ab2bf12243a HTTP/1.1" 200 None 2024-12-06 00:44:38,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c0e197bdb6ccbec4030dec0ccf332ab2bf12243a?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:44:38,141 [ scc.repo] DEBUG - PR 602 will-moore 'Changelog 7.2.0' 2024-12-06 00:44:38,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2024-12-06 00:44:39,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2024-12-06 00:44:39,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-12-06 00:44:40,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-12-06 00:44:40,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/967588c5043e47faa2d540971f8f3acbab663394 HTTP/1.1" 200 None 2024-12-06 00:44:41,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/967588c5043e47faa2d540971f8f3acbab663394/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:44:41,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/967588c5043e47faa2d540971f8f3acbab663394/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:44:42,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/967588c5043e47faa2d540971f8f3acbab663394 HTTP/1.1" 200 None 2024-12-06 00:44:42,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/967588c5043e47faa2d540971f8f3acbab663394?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:44:42,590 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-12-06 00:44:42,590 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:44:42,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-06 00:44:42,591 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:42,591 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:42,612 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:44:42,620 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:44:42,620 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:44:42,628 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:44:42,634 [ scc.git] DEBUG Already up to date. 2024-12-06 00:44:42,634 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-12-06 00:44:43,754 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-12-06 00:44:43,754 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-12-06 00:44:43,759 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2024-12-06 00:44:44,341 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-12-06 00:44:44,341 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2024-12-06 00:44:44,346 [ scc.git] DEBUG Calling 'git fetch origin pull/603/head' 2024-12-06 00:44:45,081 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-12-06 00:44:45,081 [ scc.git] DEBUG * branch refs/pull/603/head -> FETCH_HEAD 2024-12-06 00:44:45,086 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:44:45,086 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:45,086 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:45,092 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...967588c5043e47faa2d540971f8f3acbab663394' 2024-12-06 00:44:45,098 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:45,104 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 967588c5043e47faa2d540971f8f3acbab663394' 2024-12-06 00:44:45,287 [ scc.git] DEBUG Auto-merging src/index.html 2024-12-06 00:44:45,288 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:44:45,292 [ scc.git] DEBUG src/index.html | 38 +++++++++++--------- 2024-12-06 00:44:45,292 [ scc.git] DEBUG src/js/views/files.js | 41 ++++++++++++++++------ 2024-12-06 00:44:45,292 [ scc.git] DEBUG src/templates/files/figure_file_item.template.html | 4 +-- 2024-12-06 00:44:45,292 [ scc.git] DEBUG 3 files changed, 53 insertions(+), 30 deletions(-) 2024-12-06 00:44:45,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:44:45,442 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c0e197bdb6ccbec4030dec0ccf332ab2bf12243a' 2024-12-06 00:44:45,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:45,456 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Changelog 7.2.0) c0e197bdb6ccbec4030dec0ccf332ab2bf12243a' 2024-12-06 00:44:45,544 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:44:45,547 [ scc.git] DEBUG CHANGELOG.md | 21 +++++++++++++++++++++ 2024-12-06 00:44:45,547 [ scc.git] DEBUG 1 file changed, 21 insertions(+) 2024-12-06 00:44:45,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:44:45,825 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb13085761a3cdf782eb6cd7bd820de71a93e7a2' 2024-12-06 00:44:45,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:45,843 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 603 (Inset bugfixes) fb13085761a3cdf782eb6cd7bd820de71a93e7a2' 2024-12-06 00:44:46,281 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:44:46,286 [ scc.git] DEBUG src/js/models/panel_model.js | 9 +++++++-- 2024-12-06 00:44:46,286 [ scc.git] DEBUG src/js/views/figure_view.js | 17 ++++++++++++++--- 2024-12-06 00:44:46,286 [ scc.git] DEBUG src/js/views/right_panel_view.js | 4 ++-- 2024-12-06 00:44:46,286 [ scc.git] DEBUG src/js/views/util.js | 9 +++------ 2024-12-06 00:44:46,286 [ scc.git] DEBUG 4 files changed, 26 insertions(+), 13 deletions(-) 2024-12-06 00:44:46,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:44:46,437 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:44:46,481 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:46,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:46,488 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:44:46,530 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:44:46,539 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf58241b20> has no local changes 2024-12-06 00:44:46,539 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 602 will-moore 'Changelog 7.2.0' - PR 603 will-moore 'Inset bugfixes' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:44:46,550 [ scc.git] DEBUG [detached HEAD 06df3b9d] merge master -Dorg -Ssuccess-only 2024-12-06 00:44:46,550 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:44:46,550 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:44:46,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-12-06 00:44:47,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-12-06 00:44:47,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-12-06 00:44:48,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-12-06 00:44:48,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:44:49,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-12-06 00:44:49,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:44:49,925 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-12-06 00:44:49,925 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:44:49,925 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-06 00:44:49,925 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:49,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:49,933 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:44:49,939 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:44:49,940 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:44:49,954 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:44:49,968 [ scc.git] DEBUG Updating e5b3ca3..3b6c05a 2024-12-06 00:44:50,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls/30 HTTP/1.1" 200 None 2024-12-06 00:44:50,671 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-12-06 00:44:51,020 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-12-06 00:44:51,021 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-12-06 00:44:51,027 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:44:51,027 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:51,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:51,036 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-12-06 00:44:51,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:51,053 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-12-06 00:44:51,113 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-12-06 00:44:51,114 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:44:51,118 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-12-06 00:44:51,118 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-12-06 00:44:51,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:44:51,261 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:44:51,304 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:44:51,305 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:44:51,312 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:44:51,357 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:44:51,364 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf5827ae50> has no local changes 2024-12-06 00:44:51,365 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Updating e5b3ca3..3b6c05a Previously merged: - PR 30 jburel 'Build' Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:44:51,374 [ scc.git] DEBUG [detached HEAD a8eb897] merge master -Dorg -Ssuccess-only 2024-12-06 00:44:51,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:44:51,375 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:44:51,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-12-06 00:44:52,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2024-12-06 00:44:52,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2024-12-06 00:44:52,792 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-06 00:44:53,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-12-06 00:44:53,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:44:54,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:44:54,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-12-06 00:44:55,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:44:55,289 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-12-06 00:44:55,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2024-12-06 00:44:55,785 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-06 00:44:56,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-12-06 00:44:56,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:44:57,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:44:57,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-12-06 00:44:58,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:44:58,279 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-12-06 00:44:58,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2024-12-06 00:44:58,757 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-06 00:44:59,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-12-06 00:44:59,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:45:00,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:45:00,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-12-06 00:45:01,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:45:01,232 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-12-06 00:45:01,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2024-12-06 00:45:02,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2024-12-06 00:45:02,210 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-06 00:45:02,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-12-06 00:45:03,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:45:03,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:45:04,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-12-06 00:45:04,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:45:04,874 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-12-06 00:45:05,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2024-12-06 00:45:05,343 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-06 00:45:05,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-12-06 00:45:06,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:45:06,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:45:07,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-12-06 00:45:07,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:45:07,832 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-12-06 00:45:08,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2024-12-06 00:45:08,290 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-06 00:45:08,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-12-06 00:45:09,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:45:09,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:45:10,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-12-06 00:45:10,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:45:10,826 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-12-06 00:45:10,826 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:45:10,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-06 00:45:10,827 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:10,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:10,833 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:45:10,839 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:45:10,839 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:45:10,847 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:45:10,856 [ scc.git] DEBUG Already up to date. 2024-12-06 00:45:10,856 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2024-12-06 00:45:11,163 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-06 00:45:11,163 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2024-12-06 00:45:11,168 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2024-12-06 00:45:11,462 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-06 00:45:11,463 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2024-12-06 00:45:11,468 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2024-12-06 00:45:11,764 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-06 00:45:11,764 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2024-12-06 00:45:11,770 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2024-12-06 00:45:12,076 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-06 00:45:12,076 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2024-12-06 00:45:12,082 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2024-12-06 00:45:12,414 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-06 00:45:12,415 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2024-12-06 00:45:12,420 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2024-12-06 00:45:12,707 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-06 00:45:12,708 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2024-12-06 00:45:12,713 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:45:12,714 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:12,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:12,720 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-12-06 00:45:12,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:12,793 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-12-06 00:45:12,858 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:45:12,863 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2024-12-06 00:45:12,863 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2024-12-06 00:45:13,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:45:13,003 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-12-06 00:45:13,072 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:13,078 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-12-06 00:45:13,496 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-06 00:45:13,497 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:45:13,503 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2024-12-06 00:45:13,503 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2024-12-06 00:45:13,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:45:13,669 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-06 00:45:13,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:13,682 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-06 00:45:13,814 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-06 00:45:13,815 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-12-06 00:45:13,815 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-06 00:45:13,815 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-06 00:45:13,822 [ scc.git] DEBUG Calling 'git reset --hard 424e5d0427cce65a7e824489718880c6cb45898d' 2024-12-06 00:45:13,830 [ scc.git] DEBUG HEAD is now at 424e5d0 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2024-12-06 00:45:14,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:45:14,067 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-06 00:45:14,074 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-12-06 00:45:14,082 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2024-12-06 00:45:14,088 [ scc.config] DEBUG Found github.token 2024-12-06 00:45:14,088 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2024-12-06 00:45:14,088 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-12-06 00:45:14,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:14,103 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-12-06 00:45:14,184 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-06 00:45:14,185 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:45:14,190 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2024-12-06 00:45:14,190 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2024-12-06 00:45:14,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:45:14,463 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-12-06 00:45:14,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:14,530 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-12-06 00:45:14,670 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-06 00:45:14,671 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:45:14,677 [ scc.git] DEBUG package-lock.json | 6 +++--- 2024-12-06 00:45:14,677 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2024-12-06 00:45:14,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:45:14,884 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-06 00:45:14,892 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:14,898 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-06 00:45:14,934 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-06 00:45:14,934 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-12-06 00:45:14,934 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-06 00:45:14,935 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-06 00:45:14,941 [ scc.git] DEBUG Calling 'git reset --hard 2a1f1ad8c4db2b9850604e270e6c6d74f0541315' 2024-12-06 00:45:14,948 [ scc.git] DEBUG HEAD is now at 2a1f1ad merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2024-12-06 00:45:15,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:45:15,266 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-06 00:45:15,273 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-12-06 00:45:15,279 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2024-12-06 00:45:15,284 [ scc.config] DEBUG Found github.token 2024-12-06 00:45:15,284 [ scc.git] DEBUG Adding comment to issue #118. 2024-12-06 00:45:16,098 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 201 2394 2024-12-06 00:45:16,100 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:45:16,141 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:16,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:16,147 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:45:16,185 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:45:16,193 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf5828df40> has no local changes 2024-12-06 00:45:16,193 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:45:16,202 [ scc.git] DEBUG [detached HEAD 56583b7] merge master -Dorg -Ssuccess-only 2024-12-06 00:45:16,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:45:16,202 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:45:16,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-12-06 00:45:17,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2024-12-06 00:45:17,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2024-12-06 00:45:18,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-12-06 00:45:18,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-12-06 00:45:19,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-12-06 00:45:19,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:45:20,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:45:20,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-12-06 00:45:21,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:45:21,130 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-12-06 00:45:21,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-12-06 00:45:22,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-12-06 00:45:22,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-12-06 00:45:23,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:45:23,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:45:24,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-12-06 00:45:24,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:45:24,539 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-12-06 00:45:25,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-12-06 00:45:25,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-12-06 00:45:26,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-12-06 00:45:26,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:45:26,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-12-06 00:45:27,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:45:27,332 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-12-06 00:45:27,333 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:45:27,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-06 00:45:27,333 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:27,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:27,339 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:45:27,345 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:45:27,346 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:45:27,352 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:45:27,358 [ scc.git] DEBUG Already up to date. 2024-12-06 00:45:27,358 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-12-06 00:45:28,746 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-06 00:45:28,747 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-12-06 00:45:28,752 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-12-06 00:45:31,047 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-06 00:45:31,048 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-12-06 00:45:31,052 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-12-06 00:45:31,464 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-06 00:45:31,464 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-12-06 00:45:31,469 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:45:31,469 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:31,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:31,475 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-12-06 00:45:31,483 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:31,489 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-12-06 00:45:31,558 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-12-06 00:45:31,559 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:45:31,562 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-12-06 00:45:31,562 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-12-06 00:45:31,563 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-12-06 00:45:31,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:45:31,701 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-12-06 00:45:31,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:31,721 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-12-06 00:45:31,882 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-12-06 00:45:31,882 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-12-06 00:45:31,882 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-12-06 00:45:31,882 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-12-06 00:45:31,883 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:45:31,887 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-12-06 00:45:31,887 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-12-06 00:45:31,887 [ scc.git] DEBUG src/app/header.html | 5 + 2024-12-06 00:45:31,887 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-12-06 00:45:31,887 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-12-06 00:45:31,887 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-12-06 00:45:31,887 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-12-06 00:45:31,888 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-12-06 00:45:32,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:45:32,102 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-12-06 00:45:32,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:32,117 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-12-06 00:45:32,217 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-12-06 00:45:32,217 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:45:32,221 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-12-06 00:45:32,221 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-12-06 00:45:32,221 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-12-06 00:45:32,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:45:32,489 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:45:32,529 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:32,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:32,536 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:45:32,573 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:45:32,581 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581e9610> has no local changes 2024-12-06 00:45:32,581 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:45:32,590 [ scc.git] DEBUG [detached HEAD d7fac40] merge master -Dorg -Ssuccess-only 2024-12-06 00:45:32,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:45:32,591 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:45:32,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-12-06 00:45:33,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-12-06 00:45:34,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-12-06 00:45:34,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-12-06 00:45:35,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:45:35,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-12-06 00:45:35,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:45:35,908 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-12-06 00:45:35,908 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:45:35,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-06 00:45:35,908 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:35,908 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:35,916 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:45:35,922 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:45:35,923 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:45:35,930 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:45:35,937 [ scc.git] DEBUG Already up to date. 2024-12-06 00:45:35,938 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-12-06 00:45:37,208 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-12-06 00:45:37,208 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-12-06 00:45:37,213 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:45:37,213 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:37,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:37,220 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-12-06 00:45:37,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:37,232 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-12-06 00:45:37,242 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:45:37,246 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-12-06 00:45:37,246 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-12-06 00:45:37,246 [ scc.git] DEBUG requirements.txt | 2 +- 2024-12-06 00:45:37,246 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-12-06 00:45:37,246 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-12-06 00:45:37,246 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-12-06 00:45:37,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:45:37,389 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:45:37,431 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:37,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:37,439 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:45:37,477 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:45:37,484 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581fcbb0> has no local changes 2024-12-06 00:45:37,485 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:45:37,493 [ scc.git] DEBUG [detached HEAD e4f11ab] merge master -Dorg -Ssuccess-only 2024-12-06 00:45:37,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:45:37,494 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:45:37,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-12-06 00:45:38,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-12-06 00:45:38,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-12-06 00:45:39,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-12-06 00:45:39,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:45:40,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-12-06 00:45:40,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:45:40,891 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-12-06 00:45:41,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-12-06 00:45:41,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-12-06 00:45:42,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-12-06 00:45:42,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:45:43,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-12-06 00:45:43,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:45:43,653 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-12-06 00:45:43,653 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:45:43,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-06 00:45:43,654 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:43,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:43,661 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:45:43,667 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:45:43,668 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:45:43,793 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:45:43,805 [ scc.git] DEBUG Updating fc20959..3cd120c 2024-12-06 00:45:44,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/89 HTTP/1.1" 200 None 2024-12-06 00:45:44,317 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-12-06 00:45:44,838 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-12-06 00:45:44,838 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-12-06 00:45:44,844 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-12-06 00:45:45,480 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-12-06 00:45:45,481 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-12-06 00:45:45,486 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:45:45,486 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:45,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:45,494 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-06 00:45:45,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:45,505 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-06 00:45:45,751 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-12-06 00:45:45,751 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-12-06 00:45:45,751 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-12-06 00:45:45,751 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-12-06 00:45:45,751 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-06 00:45:45,751 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-06 00:45:45,758 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-06 00:45:45,764 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2024-12-06 00:45:45,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:45:45,894 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-06 00:45:45,902 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-06 00:45:45,966 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-12-06 00:45:45,974 [ scc.config] DEBUG Found github.token 2024-12-06 00:45:45,974 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-12-06 00:45:45,974 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-06 00:45:45,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:45,988 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-06 00:45:46,016 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-12-06 00:45:46,016 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-12-06 00:45:46,016 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-12-06 00:45:46,016 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-06 00:45:46,017 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-06 00:45:46,023 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-06 00:45:46,031 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2024-12-06 00:45:46,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:45:46,278 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-06 00:45:46,286 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-06 00:45:46,292 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-12-06 00:45:46,297 [ scc.config] DEBUG Found github.token 2024-12-06 00:45:46,297 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-12-06 00:45:46,298 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:45:46,336 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:46,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:46,341 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:45:46,381 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:45:46,388 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581a4880> has no local changes 2024-12-06 00:45:46,388 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating fc20959..3cd120c Previously merged: - PR 89 jburel 'Build' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:45:46,398 [ scc.git] DEBUG [detached HEAD 66118dc] merge master -Dorg -Ssuccess-only 2024-12-06 00:45:46,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:45:46,398 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:45:46,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-12-06 00:45:47,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-12-06 00:45:47,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-12-06 00:45:48,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-12-06 00:45:48,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-12-06 00:45:49,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-12-06 00:45:49,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-12-06 00:45:49,774 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:45:49,775 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-06 00:45:49,775 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:49,775 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:49,782 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:45:49,787 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:45:49,788 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:45:49,793 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:45:49,805 [ scc.git] DEBUG Updating 5d441c2..fb5ae86 2024-12-06 00:45:50,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/133 HTTP/1.1" 200 None 2024-12-06 00:45:51,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/129 HTTP/1.1" 200 None 2024-12-06 00:45:51,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/131 HTTP/1.1" 200 None 2024-12-06 00:45:52,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/128 HTTP/1.1" 200 None 2024-12-06 00:45:52,374 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:45:52,374 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:52,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:52,381 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:45:52,420 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:52,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:52,425 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:45:52,464 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:45:52,473 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581a4670> has no local changes 2024-12-06 00:45:52,473 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Updating 5d441c2..fb5ae86 Previously merged: - PR 133 jburel 'Build' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:45:52,484 [ scc.git] DEBUG [detached HEAD 15333ff] merge master -Dorg -Ssuccess-only 2024-12-06 00:45:52,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:45:52,484 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:45:52,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-12-06 00:45:53,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/15 HTTP/1.1" 200 None 2024-12-06 00:45:53,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332 HTTP/1.1" 200 None 2024-12-06 00:45:54,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:45:54,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:45:55,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-12-06 00:45:55,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-12-06 00:45:56,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:45:56,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-12-06 00:45:57,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:45:57,140 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-12-06 00:45:57,140 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:45:57,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-06 00:45:57,141 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:57,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:57,147 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:45:57,153 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:45:57,153 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:45:57,158 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:45:57,164 [ scc.git] DEBUG Already up to date. 2024-12-06 00:45:57,164 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-12-06 00:45:57,464 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-12-06 00:45:57,465 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-12-06 00:45:57,470 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:45:57,471 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:57,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:57,476 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-12-06 00:45:57,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:57,487 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-12-06 00:45:57,495 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:45:57,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:45:57,647 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:45:57,688 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:45:57,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:45:57,694 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:45:57,736 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:45:57,746 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581f3cd0> has no local changes 2024-12-06 00:45:57,746 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Excluded PRs: - PR 15 jburel 'Build' (status: failure) Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:45:57,756 [ scc.git] DEBUG [detached HEAD fe52e40] merge master -Dorg -Ssuccess-only 2024-12-06 00:45:57,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:45:57,757 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:45:58,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-12-06 00:45:58,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/29 HTTP/1.1" 200 None 2024-12-06 00:45:59,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-12-06 00:45:59,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:46:00,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-12-06 00:46:00,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24?per_page=1 HTTP/1.1" 200 None 2024-12-06 00:46:00,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-12-06 00:46:01,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/status HTTP/1.1" 200 None 2024-12-06 00:46:01,408 [ scc.repo] DEBUG - PR 29 jburel 'Build' 2024-12-06 00:46:01,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-12-06 00:46:02,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-12-06 00:46:02,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-12-06 00:46:03,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-12-06 00:46:03,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:46:04,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-12-06 00:46:04,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:46:04,643 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-12-06 00:46:04,643 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:46:04,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-06 00:46:04,643 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:04,644 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:04,653 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:46:04,662 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:46:04,662 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:46:04,669 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:46:04,676 [ scc.git] DEBUG Already up to date. 2024-12-06 00:46:04,676 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-12-06 00:46:05,107 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-12-06 00:46:05,107 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-12-06 00:46:05,114 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2024-12-06 00:46:05,649 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-12-06 00:46:05,649 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2024-12-06 00:46:05,654 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:46:05,654 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:05,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:05,661 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-12-06 00:46:05,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:05,675 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-12-06 00:46:05,691 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-12-06 00:46:05,691 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:46:05,694 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-12-06 00:46:05,694 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-12-06 00:46:05,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:05,847 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24' 2024-12-06 00:46:05,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:05,862 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Build) 92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24' 2024-12-06 00:46:05,879 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:46:05,882 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-12-06 00:46:05,882 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-12-06 00:46:05,882 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 6 deletions(-) 2024-12-06 00:46:06,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:06,234 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:46:06,277 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:06,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:06,283 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:46:06,326 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:46:06,333 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581d0730> has no local changes 2024-12-06 00:46:06,333 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' - PR 29 jburel 'Build' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:46:06,341 [ scc.git] DEBUG [detached HEAD aa5c279] merge master -Dorg -Ssuccess-only 2024-12-06 00:46:06,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:46:06,342 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:46:06,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-12-06 00:46:07,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/21 HTTP/1.1" 200 None 2024-12-06 00:46:07,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None 2024-12-06 00:46:08,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:46:08,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:46:09,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None 2024-12-06 00:46:09,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:46:09,596 [ scc.repo] DEBUG - PR 21 jburel 'Build' 2024-12-06 00:46:10,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-12-06 00:46:10,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-12-06 00:46:11,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-12-06 00:46:11,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:46:12,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-12-06 00:46:12,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:46:12,589 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-12-06 00:46:12,589 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:46:12,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-06 00:46:12,589 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:12,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:12,597 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:46:12,602 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:46:12,602 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:46:12,608 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:46:12,614 [ scc.git] DEBUG Already up to date. 2024-12-06 00:46:12,614 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-12-06 00:46:12,972 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-12-06 00:46:12,973 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-12-06 00:46:12,978 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2024-12-06 00:46:13,744 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-12-06 00:46:13,744 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2024-12-06 00:46:13,749 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:46:13,750 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:13,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:13,757 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-06 00:46:13,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:13,770 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-06 00:46:13,880 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-12-06 00:46:13,881 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-12-06 00:46:13,881 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-12-06 00:46:13,881 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-12-06 00:46:13,881 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-12-06 00:46:13,881 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-12-06 00:46:13,881 [ scc.git] DEBUG Auto-merging setup.py 2024-12-06 00:46:13,881 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-12-06 00:46:13,881 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-06 00:46:13,881 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-06 00:46:13,888 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-12-06 00:46:13,895 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-12-06 00:46:14,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:14,063 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-06 00:46:14,071 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-12-06 00:46:14,078 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details. Possible conflicts: - Upstream changes - setup.py - omero_signup/views.py - omero_signup/urls.py - omero_signup/signup_settings.py --conflicts 2024-12-06 00:46:14,084 [ scc.config] DEBUG Found github.token 2024-12-06 00:46:14,085 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-12-06 00:46:14,085 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8cd79097b8e36aef506d1589aa1bc281a0fc1b1' 2024-12-06 00:46:14,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:14,101 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Build) d8cd79097b8e36aef506d1589aa1bc281a0fc1b1' 2024-12-06 00:46:14,115 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:46:14,118 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-12-06 00:46:14,118 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-12-06 00:46:14,118 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-12-06 00:46:14,118 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2024-12-06 00:46:14,118 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-12-06 00:46:14,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:14,460 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:46:14,504 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:14,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:14,510 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:46:14,551 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:46:14,559 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581d0610> has no local changes 2024-12-06 00:46:14,559 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 21 jburel 'Build' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:46:14,569 [ scc.git] DEBUG [detached HEAD 3eb3957] merge master -Dorg -Ssuccess-only 2024-12-06 00:46:14,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:46:14,570 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:46:14,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-12-06 00:46:15,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-12-06 00:46:15,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-12-06 00:46:16,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-12-06 00:46:16,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:46:17,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-12-06 00:46:17,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:46:17,848 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-12-06 00:46:17,849 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:46:17,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-06 00:46:17,849 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:17,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:17,857 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:46:17,862 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:46:17,862 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:46:17,870 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:46:17,876 [ scc.git] DEBUG Already up to date. 2024-12-06 00:46:17,877 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-12-06 00:46:18,339 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-12-06 00:46:18,339 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-12-06 00:46:18,344 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:46:18,344 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:18,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:18,350 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-12-06 00:46:18,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:18,363 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-12-06 00:46:18,454 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:46:18,458 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-12-06 00:46:18,458 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-12-06 00:46:18,458 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-12-06 00:46:18,458 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-12-06 00:46:18,459 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-12-06 00:46:18,459 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-12-06 00:46:18,459 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-12-06 00:46:18,459 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-12-06 00:46:18,459 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-12-06 00:46:18,459 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-12-06 00:46:18,459 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-12-06 00:46:18,459 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-12-06 00:46:18,461 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-12-06 00:46:18,461 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-12-06 00:46:18,461 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-12-06 00:46:18,461 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-12-06 00:46:18,461 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-12-06 00:46:18,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:18,606 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:46:18,649 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:18,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:18,656 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:46:18,696 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:46:18,704 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581a7c70> has no local changes 2024-12-06 00:46:18,704 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:46:18,713 [ scc.git] DEBUG [detached HEAD d2fd688] merge master -Dorg -Ssuccess-only 2024-12-06 00:46:18,713 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:46:18,714 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:46:19,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-12-06 00:46:19,024 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:46:19,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-06 00:46:19,024 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:19,024 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:19,030 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:46:19,035 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:46:19,035 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:46:19,041 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:46:19,050 [ scc.git] DEBUG Updating aca9e9c..100f6ae 2024-12-06 00:46:19,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls/13 HTTP/1.1" 200 None 2024-12-06 00:46:19,776 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:46:19,776 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:19,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:19,781 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:46:19,819 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:19,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:19,824 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:46:19,862 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:46:19,868 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581f9d90> has no local changes 2024-12-06 00:46:19,868 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Updating aca9e9c..100f6ae Previously merged: - PR 13 jburel 'Build' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:46:19,876 [ scc.git] DEBUG [detached HEAD 2afbdb7] merge master -Dorg -Ssuccess-only 2024-12-06 00:46:19,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:46:19,877 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:46:20,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2024-12-06 00:46:20,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None 2024-12-06 00:46:21,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-12-06 00:46:21,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:46:22,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:46:22,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-12-06 00:46:23,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:46:23,042 [ scc.repo] DEBUG - PR 20 jburel 'Build' 2024-12-06 00:46:23,042 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:46:23,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-06 00:46:23,042 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:23,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:23,051 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:46:23,058 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:46:23,059 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:46:23,067 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:46:23,088 [ scc.git] DEBUG Already up to date. 2024-12-06 00:46:23,088 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head' 2024-12-06 00:46:23,491 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2024-12-06 00:46:23,491 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD 2024-12-06 00:46:23,496 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:46:23,496 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:23,496 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:23,503 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea' 2024-12-06 00:46:23,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:23,514 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea' 2024-12-06 00:46:23,532 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:46:23,535 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-12-06 00:46:23,535 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-12-06 00:46:23,535 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-12-06 00:46:23,535 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2024-12-06 00:46:23,535 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-12-06 00:46:23,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:23,678 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:46:23,719 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:23,720 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:23,726 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:46:23,767 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:46:23,775 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf58132fd0> has no local changes 2024-12-06 00:46:23,775 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:46:23,785 [ scc.git] DEBUG [detached HEAD 2a58cb8] merge master -Dorg -Ssuccess-only 2024-12-06 00:46:23,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:46:23,785 [ scc.git] INFO Overriding base-branch from master to main 2024-12-06 00:46:23,785 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:46:24,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-12-06 00:46:24,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None 2024-12-06 00:46:25,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None 2024-12-06 00:46:25,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None 2024-12-06 00:46:26,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:46:26,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:46:27,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17 HTTP/1.1" 200 None 2024-12-06 00:46:27,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17/comments HTTP/1.1" 200 None 2024-12-06 00:46:28,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95 HTTP/1.1" 200 None 2024-12-06 00:46:28,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:46:29,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:46:29,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-12-06 00:46:30,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-12-06 00:46:30,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-12-06 00:46:31,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-12-06 00:46:31,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:46:32,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-12-06 00:46:32,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:46:32,574 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-12-06 00:46:32,575 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:46:32,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-06 00:46:32,575 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:32,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:32,582 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-12-06 00:46:32,587 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:46:32,588 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-12-06 00:46:32,594 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-12-06 00:46:32,600 [ scc.git] DEBUG Already up to date. 2024-12-06 00:46:32,600 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-12-06 00:46:33,084 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-12-06 00:46:33,084 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-12-06 00:46:33,089 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:46:33,089 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:33,089 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:33,096 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-06 00:46:33,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:33,107 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-06 00:46:33,118 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-12-06 00:46:33,118 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-12-06 00:46:33,118 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-06 00:46:33,118 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-06 00:46:33,124 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-12-06 00:46:33,130 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-12-06 00:46:33,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:33,276 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-06 00:46:33,282 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-12-06 00:46:33,288 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-12-06 00:46:33,293 [ scc.config] DEBUG Found github.token 2024-12-06 00:46:33,293 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-12-06 00:46:33,293 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:46:33,336 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:33,337 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:33,343 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:46:33,383 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:46:33,390 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581324c0> has no local changes 2024-12-06 00:46:33,390 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 17 jburel 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:46:33,398 [ scc.git] DEBUG [detached HEAD 6655a6c] merge master -Dorg -Ssuccess-only 2024-12-06 00:46:33,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:46:33,399 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:46:33,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-12-06 00:46:33,722 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:46:33,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-06 00:46:33,722 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:33,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:33,728 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:46:33,733 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:46:33,733 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:46:33,738 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:46:33,748 [ scc.git] DEBUG Updating adfa132..70b01ed 2024-12-06 00:46:34,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls/24 HTTP/1.1" 200 None 2024-12-06 00:46:34,427 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:46:34,427 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:34,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:34,433 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:46:34,472 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:34,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:34,477 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:46:34,516 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:46:34,523 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf58143c10> has no local changes 2024-12-06 00:46:34,523 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Updating adfa132..70b01ed Previously merged: - PR 24 jburel 'Build' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:46:34,532 [ scc.git] DEBUG [detached HEAD 46d041c] merge master -Dorg -Ssuccess-only 2024-12-06 00:46:34,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:46:34,532 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:46:34,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-12-06 00:46:34,834 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:46:34,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-06 00:46:34,834 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:34,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:34,840 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:46:34,844 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:46:34,845 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:46:34,850 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:46:34,859 [ scc.git] DEBUG Updating 8da48e1..5bfef29 2024-12-06 00:46:35,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls/36 HTTP/1.1" 200 None 2024-12-06 00:46:35,583 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:46:35,583 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:35,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:35,589 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:46:35,628 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:35,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:35,634 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:46:35,672 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:46:35,679 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf580e9970> has no local changes 2024-12-06 00:46:35,679 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Updating 8da48e1..5bfef29 Previously merged: - PR 36 jburel 'Build' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:46:35,687 [ scc.git] DEBUG [detached HEAD 797bbcb] merge master -Dorg -Ssuccess-only 2024-12-06 00:46:35,688 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:46:35,688 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:46:36,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-12-06 00:46:36,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-12-06 00:46:37,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-12-06 00:46:37,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-12-06 00:46:37,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:46:38,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-12-06 00:46:38,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:46:38,894 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-12-06 00:46:38,895 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:46:38,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-06 00:46:38,895 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:38,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:38,901 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-06 00:46:38,907 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:46:38,907 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-06 00:46:38,912 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-06 00:46:38,919 [ scc.git] DEBUG Already up to date. 2024-12-06 00:46:38,920 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-12-06 00:46:39,254 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-12-06 00:46:39,255 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-12-06 00:46:39,259 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:46:39,259 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:39,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:39,265 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-06 00:46:39,271 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:39,276 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-06 00:46:39,288 [ scc.git] DEBUG Auto-merging Dockerfile 2024-12-06 00:46:39,289 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-12-06 00:46:39,289 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-06 00:46:39,289 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-06 00:46:39,295 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-12-06 00:46:39,302 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-12-06 00:46:39,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:39,436 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-06 00:46:39,443 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-12-06 00:46:39,449 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-12-06 00:46:39,453 [ scc.config] DEBUG Found github.token 2024-12-06 00:46:39,454 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-12-06 00:46:39,454 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:46:39,493 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:39,493 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:39,499 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:46:39,536 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:46:39,543 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf580e95e0> has no local changes 2024-12-06 00:46:39,543 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:46:39,551 [ scc.git] DEBUG [detached HEAD 012ce7d] merge master -Dorg -Ssuccess-only 2024-12-06 00:46:39,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:46:39,552 [ scc.git] INFO Overriding base-branch from master to develop 2024-12-06 00:46:39,552 [ scc.repo] DEBUG ## PRs found: 2024-12-06 00:46:40,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-12-06 00:46:40,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-12-06 00:46:41,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-12-06 00:46:41,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-06 00:46:41,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:46:42,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-06 00:46:42,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-06 00:46:43,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:46:43,249 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-06 00:46:43,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-12-06 00:46:44,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-12-06 00:46:44,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None 2024-12-06 00:46:45,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-12-06 00:46:45,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-12-06 00:46:46,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-12-06 00:46:46,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-12-06 00:46:47,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-06 00:46:47,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-06 00:46:47,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-06 00:46:48,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-12-06 00:46:48,368 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-06 00:46:48,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-12-06 00:46:49,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-12-06 00:46:49,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-12-06 00:46:50,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-12-06 00:46:50,316 [ scc.repo] DEBUG ## Branches found: 2024-12-06 00:46:50,316 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-06 00:46:50,316 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:50,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:50,324 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-12-06 00:46:50,330 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-06 00:46:50,330 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-12-06 00:46:50,337 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-12-06 00:46:50,345 [ scc.git] DEBUG Already up to date. 2024-12-06 00:46:50,345 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-12-06 00:46:50,990 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-12-06 00:46:50,990 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-12-06 00:46:50,997 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-12-06 00:46:51,677 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-12-06 00:46:51,677 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-12-06 00:46:51,683 [ scc.git] DEBUG ## Unique users: [] 2024-12-06 00:46:51,683 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:51,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:51,690 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-06 00:46:51,698 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:51,703 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-06 00:46:51,861 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-12-06 00:46:51,861 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-12-06 00:46:51,861 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-06 00:46:51,862 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-06 00:46:51,868 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-12-06 00:46:51,875 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-12-06 00:46:52,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:52,021 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-06 00:46:52,030 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-12-06 00:46:52,037 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-12-06 00:46:52,044 [ scc.config] DEBUG Found github.token 2024-12-06 00:46:52,045 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-12-06 00:46:52,045 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-06 00:46:52,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:52,060 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-06 00:46:52,121 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-06 00:46:52,124 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-12-06 00:46:52,124 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-12-06 00:46:52,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:52,405 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-06 00:46:52,446 [ scc.git] DEBUG Get sha1 of %s 2024-12-06 00:46:52,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-06 00:46:52,454 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:46:52,494 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:46:52,501 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf58176f40> has no local changes 2024-12-06 00:46:52,501 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:46:52,511 [ scc.git] DEBUG [detached HEAD 39cf822] merge master -Dorg -Ssuccess-only 2024-12-06 00:46:52,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:46:52,511 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-06 00:46:52,591 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-12-06 00:46:52,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:52,830 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-12-06 00:46:52,836 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-12-06 00:46:53,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:53,214 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-12-06 00:46:53,223 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-12-06 00:46:53,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:53,602 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-12-06 00:46:53,609 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-12-06 00:46:53,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:53,989 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-12-06 00:46:54,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:54,365 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-12-06 00:46:54,371 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-12-06 00:46:54,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:54,776 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-12-06 00:46:54,781 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-12-06 00:46:55,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:55,166 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-12-06 00:46:55,172 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-12-06 00:46:55,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:55,588 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-12-06 00:46:55,593 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-12-06 00:46:55,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:55,968 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-12-06 00:46:55,974 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-12-06 00:46:56,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:56,361 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-12-06 00:46:56,367 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-12-06 00:46:56,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:56,750 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-12-06 00:46:56,756 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-12-06 00:46:57,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:57,134 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-12-06 00:46:57,142 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-12-06 00:46:57,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:57,563 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-12-06 00:46:57,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:57,949 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-12-06 00:46:58,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:58,332 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-12-06 00:46:58,337 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-12-06 00:46:58,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:58,727 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-12-06 00:46:59,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:59,120 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-12-06 00:46:59,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:59,510 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-12-06 00:46:59,516 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-12-06 00:46:59,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:46:59,908 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-12-06 00:46:59,914 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-12-06 00:47:00,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:47:00,337 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-12-06 00:47:00,341 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-12-06 00:47:00,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:47:00,726 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-12-06 00:47:00,732 [ scc.config] DEBUG Found submodule.scripts.url 2024-12-06 00:47:01,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-06 00:47:01,113 [ scc.config] DEBUG Found submodule.scripts.branch 2024-12-06 00:47:01,113 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-06 00:47:01,192 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf5b6b6e20> has local changes 2024-12-06 00:47:01,193 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Updating 4628e82..ca8c2ea Previously merged: - PR 67 jburel 'Gateway 5.10.0' - PR 68 jburel 'Bump action ' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Updating 027b3e6..4777ef8 Previously merged: - PR 27 jburel 'Build' - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating 9b73dd9..11d3587 Previously merged: - PR 165 jburel 'Build' Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 602 will-moore 'Changelog 7.2.0' - PR 603 will-moore 'Inset bugfixes' Repository: ome/omero-fpbioimage Updating e5b3ca3..3b6c05a Previously merged: - PR 30 jburel 'Build' Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Updating fc20959..3cd120c Previously merged: - PR 89 jburel 'Build' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Updating 5d441c2..fb5ae86 Previously merged: - PR 133 jburel 'Build' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' Repository: ome/omero-prometheus-tools Excluded PRs: - PR 15 jburel 'Build' (status: failure) Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' - PR 29 jburel 'Build' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 21 jburel 'Build' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Updating aca9e9c..100f6ae Previously merged: - PR 13 jburel 'Build' Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 17 jburel 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Updating adfa132..70b01ed Previously merged: - PR 24 jburel 'Build' Repository: openmicroscopy/omero-webtest Updating 8da48e1..5bfef29 Previously merged: - PR 36 jburel 'Build' Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)' 2024-12-06 00:47:01,207 [ scc.git] DEBUG [detached HEAD 4534c75] merge master -Dorg -Ssuccess-only 2024-12-06 00:47:01,208 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-12-06 00:47:01,208 [ scc.merge] INFO Repository: ome/omero-plugins 2024-12-06 00:47:01,208 [ scc.merge] INFO Already up to date. 2024-12-06 00:47:01,208 [ scc.merge] INFO 2024-12-06 00:47:01,208 [ scc.merge] INFO 2024-12-06 00:47:01,208 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-12-06 00:47:01,208 [ scc.merge] INFO Updating 4628e82..ca8c2ea 2024-12-06 00:47:01,208 [ scc.merge] INFO Previously merged: 2024-12-06 00:47:01,208 [ scc.merge] INFO - PR 67 jburel 'Gateway 5.10.0' 2024-12-06 00:47:01,208 [ scc.merge] INFO - PR 68 jburel 'Bump action ' 2024-12-06 00:47:01,208 [ scc.merge] INFO 2024-12-06 00:47:01,208 [ scc.merge] INFO 2024-12-06 00:47:01,208 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-12-06 00:47:01,208 [ scc.merge] INFO Excluded PRs: 2024-12-06 00:47:01,208 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-12-06 00:47:01,208 [ scc.merge] INFO Updating 027b3e6..4777ef8 2024-12-06 00:47:01,208 [ scc.merge] INFO Previously merged: 2024-12-06 00:47:01,208 [ scc.merge] INFO - PR 27 jburel 'Build' 2024-12-06 00:47:01,208 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-12-06 00:47:01,208 [ scc.merge] INFO 2024-12-06 00:47:01,208 [ scc.merge] INFO 2024-12-06 00:47:01,208 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-12-06 00:47:01,209 [ scc.merge] INFO Excluded PRs: 2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-12-06 00:47:01,209 [ scc.merge] INFO Already up to date. 2024-12-06 00:47:01,209 [ scc.merge] INFO 2024-12-06 00:47:01,209 [ scc.merge] INFO Merged PRs: 2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-12-06 00:47:01,209 [ scc.merge] INFO 2024-12-06 00:47:01,209 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-12-06 00:47:01,209 [ scc.merge] INFO Excluded PRs: 2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-12-06 00:47:01,209 [ scc.merge] INFO Updating 9b73dd9..11d3587 2024-12-06 00:47:01,209 [ scc.merge] INFO Previously merged: 2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 165 jburel 'Build' 2024-12-06 00:47:01,209 [ scc.merge] INFO 2024-12-06 00:47:01,209 [ scc.merge] INFO Merged PRs: 2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-12-06 00:47:01,209 [ scc.merge] INFO 2024-12-06 00:47:01,209 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-12-06 00:47:01,209 [ scc.merge] INFO 2024-12-06 00:47:01,209 [ scc.merge] INFO Repository: ome/omero-figure 2024-12-06 00:47:01,209 [ scc.merge] INFO Excluded PRs: 2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier) 2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-12-06 00:47:01,209 [ scc.merge] INFO Already up to date. 2024-12-06 00:47:01,209 [ scc.merge] INFO 2024-12-06 00:47:01,209 [ scc.merge] INFO Merged PRs: 2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 602 will-moore 'Changelog 7.2.0' 2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 603 will-moore 'Inset bugfixes' 2024-12-06 00:47:01,209 [ scc.merge] INFO 2024-12-06 00:47:01,209 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-12-06 00:47:01,209 [ scc.merge] INFO Updating e5b3ca3..3b6c05a 2024-12-06 00:47:01,209 [ scc.merge] INFO Previously merged: 2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 30 jburel 'Build' 2024-12-06 00:47:01,209 [ scc.merge] INFO 2024-12-06 00:47:01,209 [ scc.merge] INFO Merged PRs: 2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-12-06 00:47:01,210 [ scc.merge] INFO 2024-12-06 00:47:01,210 [ scc.merge] INFO Repository: ome/omero-gallery 2024-12-06 00:47:01,210 [ scc.merge] INFO Already up to date. 2024-12-06 00:47:01,210 [ scc.merge] INFO 2024-12-06 00:47:01,210 [ scc.merge] INFO Merged PRs: 2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-12-06 00:47:01,210 [ scc.merge] INFO 2024-12-06 00:47:01,210 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-12-06 00:47:01,210 [ scc.merge] INFO 2024-12-06 00:47:01,210 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-12-06 00:47:01,210 [ scc.merge] INFO Excluded PRs: 2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-12-06 00:47:01,210 [ scc.merge] INFO Already up to date. 2024-12-06 00:47:01,210 [ scc.merge] INFO 2024-12-06 00:47:01,210 [ scc.merge] INFO Merged PRs: 2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-12-06 00:47:01,210 [ scc.merge] INFO 2024-12-06 00:47:01,210 [ scc.merge] INFO Repository: ome/omero-mapr 2024-12-06 00:47:01,210 [ scc.merge] INFO Excluded PRs: 2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-12-06 00:47:01,210 [ scc.merge] INFO Already up to date. 2024-12-06 00:47:01,210 [ scc.merge] INFO 2024-12-06 00:47:01,210 [ scc.merge] INFO Merged PRs: 2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-12-06 00:47:01,210 [ scc.merge] INFO 2024-12-06 00:47:01,210 [ scc.merge] INFO Repository: ome/omero-metadata 2024-12-06 00:47:01,210 [ scc.merge] INFO Updating fc20959..3cd120c 2024-12-06 00:47:01,210 [ scc.merge] INFO Previously merged: 2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 89 jburel 'Build' 2024-12-06 00:47:01,211 [ scc.merge] INFO 2024-12-06 00:47:01,211 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-12-06 00:47:01,211 [ scc.merge] INFO 2024-12-06 00:47:01,211 [ scc.merge] INFO Repository: ome/omero-parade 2024-12-06 00:47:01,211 [ scc.merge] INFO Excluded PRs: 2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-12-06 00:47:01,211 [ scc.merge] INFO Updating 5d441c2..fb5ae86 2024-12-06 00:47:01,211 [ scc.merge] INFO Previously merged: 2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 133 jburel 'Build' 2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-12-06 00:47:01,211 [ scc.merge] INFO 2024-12-06 00:47:01,211 [ scc.merge] INFO 2024-12-06 00:47:01,211 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-12-06 00:47:01,211 [ scc.merge] INFO Excluded PRs: 2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 15 jburel 'Build' (status: failure) 2024-12-06 00:47:01,211 [ scc.merge] INFO Already up to date. 2024-12-06 00:47:01,211 [ scc.merge] INFO 2024-12-06 00:47:01,211 [ scc.merge] INFO Merged PRs: 2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-12-06 00:47:01,211 [ scc.merge] INFO 2024-12-06 00:47:01,211 [ scc.merge] INFO Repository: ome/omero-rois 2024-12-06 00:47:01,211 [ scc.merge] INFO Excluded PRs: 2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-12-06 00:47:01,211 [ scc.merge] INFO Already up to date. 2024-12-06 00:47:01,211 [ scc.merge] INFO 2024-12-06 00:47:01,211 [ scc.merge] INFO Merged PRs: 2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 29 jburel 'Build' 2024-12-06 00:47:01,211 [ scc.merge] INFO 2024-12-06 00:47:01,211 [ scc.merge] INFO Repository: ome/omero-signup 2024-12-06 00:47:01,211 [ scc.merge] INFO Already up to date. 2024-12-06 00:47:01,212 [ scc.merge] INFO 2024-12-06 00:47:01,212 [ scc.merge] INFO Merged PRs: 2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 21 jburel 'Build' 2024-12-06 00:47:01,212 [ scc.merge] INFO 2024-12-06 00:47:01,212 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-12-06 00:47:01,212 [ scc.merge] INFO 2024-12-06 00:47:01,212 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-12-06 00:47:01,212 [ scc.merge] INFO Already up to date. 2024-12-06 00:47:01,212 [ scc.merge] INFO 2024-12-06 00:47:01,212 [ scc.merge] INFO Merged PRs: 2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-12-06 00:47:01,212 [ scc.merge] INFO 2024-12-06 00:47:01,212 [ scc.merge] INFO Repository: ome/omero-upload 2024-12-06 00:47:01,212 [ scc.merge] INFO Updating aca9e9c..100f6ae 2024-12-06 00:47:01,212 [ scc.merge] INFO Previously merged: 2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 13 jburel 'Build' 2024-12-06 00:47:01,212 [ scc.merge] INFO 2024-12-06 00:47:01,212 [ scc.merge] INFO 2024-12-06 00:47:01,212 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-12-06 00:47:01,212 [ scc.merge] INFO Already up to date. 2024-12-06 00:47:01,212 [ scc.merge] INFO 2024-12-06 00:47:01,212 [ scc.merge] INFO Merged PRs: 2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 20 jburel 'Build' 2024-12-06 00:47:01,212 [ scc.merge] INFO 2024-12-06 00:47:01,212 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-12-06 00:47:01,212 [ scc.merge] INFO Excluded PRs: 2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure) 2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 17 jburel 'Build' (status: failure) 2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-12-06 00:47:01,212 [ scc.merge] INFO Already up to date. 2024-12-06 00:47:01,212 [ scc.merge] INFO 2024-12-06 00:47:01,212 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-12-06 00:47:01,212 [ scc.merge] INFO 2024-12-06 00:47:01,212 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-12-06 00:47:01,212 [ scc.merge] INFO Updating adfa132..70b01ed 2024-12-06 00:47:01,212 [ scc.merge] INFO Previously merged: 2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 24 jburel 'Build' 2024-12-06 00:47:01,213 [ scc.merge] INFO 2024-12-06 00:47:01,213 [ scc.merge] INFO 2024-12-06 00:47:01,213 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-12-06 00:47:01,213 [ scc.merge] INFO Updating 8da48e1..5bfef29 2024-12-06 00:47:01,213 [ scc.merge] INFO Previously merged: 2024-12-06 00:47:01,213 [ scc.merge] INFO - PR 36 jburel 'Build' 2024-12-06 00:47:01,213 [ scc.merge] INFO 2024-12-06 00:47:01,213 [ scc.merge] INFO 2024-12-06 00:47:01,213 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-12-06 00:47:01,213 [ scc.merge] INFO Already up to date. 2024-12-06 00:47:01,213 [ scc.merge] INFO 2024-12-06 00:47:01,213 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-06 00:47:01,213 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-12-06 00:47:01,213 [ scc.merge] INFO 2024-12-06 00:47:01,213 [ scc.merge] INFO Repository: ome/scripts 2024-12-06 00:47:01,213 [ scc.merge] INFO Excluded PRs: 2024-12-06 00:47:01,213 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-12-06 00:47:01,213 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-12-06 00:47:01,213 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-12-06 00:47:01,213 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-12-06 00:47:01,213 [ scc.merge] INFO Already up to date. 2024-12-06 00:47:01,213 [ scc.merge] INFO 2024-12-06 00:47:01,213 [ scc.merge] INFO Merged PRs: 2024-12-06 00:47:01,213 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-06 00:47:01,213 [ scc.merge] INFO 2024-12-06 00:47:01,213 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-06 00:47:01,213 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-06 00:47:01,213 [ scc.merge] INFO 2024-12-06 00:47:01,213 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-06 00:47:01,214 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-06 00:47:01,220 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-06 00:47:01,227 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-06 00:47:01,234 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-06 00:47:01,240 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-06 00:47:01,246 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-06 00:47:01,253 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-06 00:47:01,259 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-06 00:47:01,265 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-06 00:47:01,271 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,276 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-06 00:47:01,277 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-06 00:47:01,283 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-06 00:47:01,289 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-06 00:47:01,296 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-06 00:47:01,302 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-06 00:47:01,308 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,316 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-06 00:47:01,316 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-06 00:47:01,323 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-06 00:47:01,330 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-06 00:47:01,337 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-06 00:47:01,344 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,350 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,350 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-06 00:47:01,350 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-06 00:47:01,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-06 00:47:01,357 [ scc.git] DEBUG Calling 'git remote' 2024-12-06 00:47:01,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: 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or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 7630089] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 1dfb1389 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from b4102d4 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from fc20959 nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 58cc9cb] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-06 00:47:48,078 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-06 00:47:57,053 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-06 00:47:59,367 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-06 00:48:03,852 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-06 00:48:44,184 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS