Started by upstream project "Trigger" build number 45 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/e9d96de4efbb3e39a2ce24824e54985c7c2760a6ed46c5415ea0aa1fd1e18d41/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 41 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.2.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.2.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.9.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.13.0-py3-none-any.whl.metadata (3.4 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-50.0.0-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.3 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (41 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.18-py3-none-any.whl.metadata (6.1 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.7.22-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.9.1-py3-none-any.whl (449 kB) Using cached pyjwt-2.13.0-py3-none-any.whl (31 kB) Using cached cryptography-50.0.0-cp311-abi3-manylinux_2_34_x86_64.whl (4.7 MB) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (221 kB) Using cached idna-3.18-py3-none-any.whl (65 kB) Using cached certifi-2026.7.22-py3-none-any.whl (136 kB) Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.9.1 PyYAML-6.0.3 certifi-2026.7.22 cffi-2.1.1 charset_normalizer-3.4.9 cryptography-50.0.0 future-1.0.0 idna-3.18 pycparser-3.0 pyjwt-2.13.0 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-08-05 01:37:20,812 [ scc.config] DEBUG Found github.token 2026-08-05 01:37:20,814 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-08-05 01:37:21,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:37:21,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:37:21,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-08-05 01:37:21,932 [ scc.gh] DEBUG 4965 remaining from 5000 (Reset at 02:08 2026-08-05 01:37:21,932 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:37:21,943 [ scc.git] DEBUG Check current status 2026-08-05 01:37:21,943 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:37:21,963 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-08-05 01:37:21,964 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:37:22,182 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-05 01:37:22,234 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-05 01:37:22,300 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-08-05 01:37:22,345 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-08-05 01:37:22,417 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-08-05 01:37:22,461 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-05 01:37:22,519 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-05 01:37:22,592 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-08-05 01:37:22,634 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-05 01:37:22,671 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-08-05 01:37:22,709 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-05 01:37:22,744 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-05 01:37:22,784 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-08-05 01:37:22,826 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-05 01:37:22,886 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-08-05 01:37:22,924 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-05 01:37:22,970 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-08-05 01:37:23,028 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-08-05 01:37:23,063 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-05 01:37:23,103 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-05 01:37:23,144 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-05 01:37:23,166 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-08-05 01:37:23,179 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:37:23,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-08-05 01:37:23,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:37:24,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:37:24,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:37:25,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:37:25,354 [ scc.git] DEBUG Resetting... 2026-08-05 01:37:25,354 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-08-05 01:37:25,686 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-08-05 01:37:25,687 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-08-05 01:37:26,795 [ scc.git] DEBUG Check current status 2026-08-05 01:37:26,795 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:37:26,809 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-08-05 01:37:26,810 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:37:26,974 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-05 01:37:27,007 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-05 01:37:27,036 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-08-05 01:37:27,064 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-08-05 01:37:27,111 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-08-05 01:37:27,148 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-05 01:37:27,180 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-05 01:37:27,221 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-08-05 01:37:27,248 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-05 01:37:27,275 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-08-05 01:37:27,306 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-05 01:37:27,337 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-05 01:37:27,367 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-08-05 01:37:27,399 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-05 01:37:27,430 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-08-05 01:37:27,461 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-05 01:37:27,492 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-08-05 01:37:27,522 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-08-05 01:37:27,550 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-05 01:37:27,579 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-05 01:37:27,611 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-05 01:37:27,629 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-08-05 01:37:27,630 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-08-05 01:37:27,630 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-08-05 01:37:27,630 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-08-05 01:37:27,630 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-08-05 01:37:27,630 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-08-05 01:37:27,630 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:37:27,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-08-05 01:37:28,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-08-05 01:37:28,480 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:37:28,480 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-05 01:37:28,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-08-05 01:37:28,999 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:37:28,999 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-05 01:37:29,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-08-05 01:37:29,539 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:37:29,539 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-05 01:37:29,539 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:37:29,539 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:37:29,539 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:37:29,550 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:37:29,564 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:37:29,565 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:37:29,582 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:37:29,633 [ scc.git] DEBUG Already up to date. 2026-08-05 01:37:29,633 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-08-05 01:37:30,063 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-05 01:37:30,063 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-08-05 01:37:30,092 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-08-05 01:37:30,480 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-05 01:37:30,481 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-08-05 01:37:30,508 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-08-05 01:37:30,906 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-05 01:37:30,906 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-08-05 01:37:30,932 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:37:30,932 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:37:30,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:37:30,945 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-05 01:37:30,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:37:30,978 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-05 01:37:31,642 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:37:31,710 [ scc.git] DEBUG scripts | 2 +- 2026-08-05 01:37:31,710 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-05 01:37:31,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:37:31,918 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-05 01:37:31,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:37:31,954 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-05 01:37:32,606 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:37:32,669 [ scc.git] DEBUG omero-figure | 2 +- 2026-08-05 01:37:32,669 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-05 01:37:32,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:37:32,863 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-05 01:37:32,899 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:37:32,907 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-05 01:37:33,566 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:37:33,629 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-08-05 01:37:33,630 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-05 01:37:33,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:37:33,827 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:37:34,520 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-08-05 01:37:35,326 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-08-05 01:37:35,655 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-08-05 01:37:35,656 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:37:35,656 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:37:35,670 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:37:38,019 [ scc.git] DEBUG has no local changes 2026-08-05 01:37:38,019 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:37:39,310 [ scc.git] DEBUG [detached HEAD 3b69bef] merge master -Dorg -Snone 2026-08-05 01:37:39,312 [ scc.merge] INFO Repository: ome/omero-plugins 2026-08-05 01:37:39,312 [ scc.merge] INFO Already up to date. 2026-08-05 01:37:39,312 [ scc.merge] INFO 2026-08-05 01:37:39,312 [ scc.merge] INFO Merged PRs: 2026-08-05 01:37:39,312 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-05 01:37:39,312 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-05 01:37:39,312 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-05 01:37:39,312 [ scc.merge] INFO 2026-08-05 01:37:39,312 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-08-05 01:37:39,313 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' Submodule path 'omero-figure': checked out '188872793f83c8a30a4cda1d0db1412c61401c00' Submodule path 'omero-iviewer': checked out '177e4b5ec04efe2a2d2e083159f678d8bd747db3' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-08-05 01:37:57,892 [ scc.config] DEBUG Found github.token 2026-08-05 01:37:57,894 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-08-05 01:37:58,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:37:58,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:37:58,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-08-05 01:37:58,974 [ scc.gh] DEBUG 4965 remaining from 5000 (Reset at 02:08 2026-08-05 01:37:58,974 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:37:58,986 [ scc.git] DEBUG Check current status 2026-08-05 01:37:58,986 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:37:59,010 [ scc.git] DEBUG 3b69bef merge master -Dorg -Snone 2026-08-05 01:37:59,011 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:37:59,178 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-05 01:37:59,210 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-05 01:37:59,249 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-08-05 01:37:59,291 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-08-05 01:37:59,331 [ scc.git] DEBUG +188872793f83c8a30a4cda1d0db1412c61401c00 omero-figure (v8.0.1.rc2-14-g18887279) 2026-08-05 01:37:59,368 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-05 01:37:59,406 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-05 01:37:59,466 [ scc.git] DEBUG +177e4b5ec04efe2a2d2e083159f678d8bd747db3 omero-iviewer (v0.18.0-1-g177e4b5e) 2026-08-05 01:37:59,504 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-05 01:37:59,535 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-08-05 01:37:59,569 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-05 01:37:59,598 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-05 01:37:59,626 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-08-05 01:37:59,655 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-05 01:37:59,684 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-08-05 01:37:59,712 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-05 01:37:59,740 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-08-05 01:37:59,768 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-08-05 01:37:59,796 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-05 01:37:59,827 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-05 01:37:59,858 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-05 01:37:59,881 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-08-05 01:37:59,893 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:37:59,893 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-08-05 01:37:59,896 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-08-05 01:38:00,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-08-05 01:38:00,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:01,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:01,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:02,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:02,097 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:02,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-08-05 01:38:02,268 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:02,281 [ scc.git] DEBUG Check current status 2026-08-05 01:38:02,281 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:02,300 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-08-05 01:38:02,301 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:02,409 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:02,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-08-05 01:38:03,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:03,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:04,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:04,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:04,719 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:04,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:04,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-08-05 01:38:04,826 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:04,837 [ scc.git] DEBUG Check current status 2026-08-05 01:38:04,837 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:04,854 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-08-05 01:38:04,855 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:04,963 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:05,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-08-05 01:38:05,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:06,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:06,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:07,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:07,205 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:07,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:07,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-08-05 01:38:07,312 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:07,324 [ scc.git] DEBUG Check current status 2026-08-05 01:38:07,324 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:07,342 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-08-05 01:38:07,343 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:07,461 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:07,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-08-05 01:38:08,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:08,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:09,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:09,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:09,743 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:09,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:09,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-08-05 01:38:09,846 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:09,860 [ scc.git] DEBUG Check current status 2026-08-05 01:38:09,860 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:09,878 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-05 01:38:09,879 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:09,986 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:10,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-08-05 01:38:10,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:11,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:11,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:12,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:12,201 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:12,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:12,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-08-05 01:38:12,317 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:12,330 [ scc.git] DEBUG Check current status 2026-08-05 01:38:12,330 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:12,348 [ scc.git] DEBUG 18887279 Merge pull request #693 from ome/dependabot/npm_and_yarn/dompurify-3.4.9 2026-08-05 01:38:12,349 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:12,467 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:12,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-08-05 01:38:13,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:13,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:14,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:14,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:14,692 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:14,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:14,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-08-05 01:38:14,801 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:14,815 [ scc.git] DEBUG Check current status 2026-08-05 01:38:14,815 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:14,841 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-08-05 01:38:14,842 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:14,959 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:15,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-08-05 01:38:15,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:16,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:16,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:17,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:17,190 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:17,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:17,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-08-05 01:38:17,309 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:17,324 [ scc.git] DEBUG Check current status 2026-08-05 01:38:17,324 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:17,345 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-08-05 01:38:17,346 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:17,471 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:17,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-08-05 01:38:18,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:18,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:19,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:19,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:19,704 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:19,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:19,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-08-05 01:38:19,805 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:19,816 [ scc.git] DEBUG Check current status 2026-08-05 01:38:19,816 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:19,840 [ scc.git] DEBUG 177e4b5e add dev 2026-08-05 01:38:19,842 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:19,953 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:20,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-08-05 01:38:20,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:21,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:21,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:22,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:22,111 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:22,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:22,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-08-05 01:38:22,213 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:22,224 [ scc.git] DEBUG Check current status 2026-08-05 01:38:22,225 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:22,242 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-08-05 01:38:22,244 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:22,351 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:22,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-08-05 01:38:23,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:23,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:24,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:24,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:24,593 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:24,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:24,711 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-08-05 01:38:24,711 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:24,723 [ scc.git] DEBUG Check current status 2026-08-05 01:38:24,723 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:24,739 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-08-05 01:38:24,740 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:24,844 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:25,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-08-05 01:38:25,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:26,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:26,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:27,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:27,026 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:27,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:27,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-08-05 01:38:27,132 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:27,145 [ scc.git] DEBUG Check current status 2026-08-05 01:38:27,145 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:27,164 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-08-05 01:38:27,165 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:27,277 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:27,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-08-05 01:38:28,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:28,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:28,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:29,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:29,429 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:29,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:29,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-08-05 01:38:29,532 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:29,545 [ scc.git] DEBUG Check current status 2026-08-05 01:38:29,545 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:29,563 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-08-05 01:38:29,564 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:29,688 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:30,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-08-05 01:38:30,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:30,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:31,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:31,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:31,915 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:32,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:32,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-08-05 01:38:32,008 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:32,022 [ scc.git] DEBUG Check current status 2026-08-05 01:38:32,022 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:32,042 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-08-05 01:38:32,043 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:32,157 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:32,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-08-05 01:38:33,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:33,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:34,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:34,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:34,492 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:34,595 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:34,596 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-08-05 01:38:34,596 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:34,611 [ scc.git] DEBUG Check current status 2026-08-05 01:38:34,611 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:34,632 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-08-05 01:38:34,633 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:34,743 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:35,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-08-05 01:38:35,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:36,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:36,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:37,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:37,039 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:37,153 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:37,154 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-08-05 01:38:37,154 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:37,167 [ scc.git] DEBUG Check current status 2026-08-05 01:38:37,167 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:37,188 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-08-05 01:38:37,189 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:37,301 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:37,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-08-05 01:38:37,512 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-08-05 01:38:37,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-08-05 01:38:38,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:38,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:39,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:39,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:39,676 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:39,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:39,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-08-05 01:38:39,798 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:39,812 [ scc.git] DEBUG Check current status 2026-08-05 01:38:39,812 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:39,833 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-08-05 01:38:39,835 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:39,948 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:40,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-08-05 01:38:40,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:41,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:41,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:42,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:42,184 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:42,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:42,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-08-05 01:38:42,286 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:42,302 [ scc.git] DEBUG Check current status 2026-08-05 01:38:42,302 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:42,320 [ scc.git] DEBUG 160d894 Fix display of code 2026-08-05 01:38:42,321 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:42,432 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:42,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-08-05 01:38:43,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:43,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:44,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:44,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:44,618 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:44,753 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:44,754 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-08-05 01:38:44,754 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:44,770 [ scc.git] DEBUG Check current status 2026-08-05 01:38:44,770 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:44,792 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-08-05 01:38:44,793 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:44,913 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:44,913 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-08-05 01:38:45,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-08-05 01:38:45,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:46,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:46,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:47,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:47,093 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:47,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:47,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-08-05 01:38:47,201 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:47,218 [ scc.git] DEBUG Check current status 2026-08-05 01:38:47,218 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:47,238 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-08-05 01:38:47,239 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:47,365 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:47,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-08-05 01:38:47,563 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-08-05 01:38:47,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-08-05 01:38:48,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:48,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:49,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:49,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:49,780 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:49,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:49,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-08-05 01:38:49,883 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:49,894 [ scc.git] DEBUG Check current status 2026-08-05 01:38:49,894 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:49,912 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-08-05 01:38:49,913 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:50,028 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:50,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-08-05 01:38:50,238 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-08-05 01:38:50,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-08-05 01:38:51,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:51,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:51,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:52,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:52,409 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:52,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:52,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-08-05 01:38:52,519 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:52,531 [ scc.git] DEBUG Check current status 2026-08-05 01:38:52,531 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:52,557 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-08-05 01:38:52,558 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:52,669 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:52,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-08-05 01:38:53,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:54,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:54,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:54,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:54,908 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:55,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:55,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-08-05 01:38:55,018 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-05 01:38:55,033 [ scc.git] DEBUG Check current status 2026-08-05 01:38:55,033 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:38:55,054 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-08-05 01:38:55,055 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:38:55,165 [ scc.config] DEBUG Found remote.origin.url 2026-08-05 01:38:55,165 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-08-05 01:38:55,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-05 01:38:55,399 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-05 01:38:55,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-08-05 01:38:56,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-05 01:38:56,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-05 01:38:57,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-05 01:38:57,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-05 01:38:57,837 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:38:57,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:38:57,953 [ scc.git] DEBUG Resetting... 2026-08-05 01:38:57,953 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-08-05 01:38:58,292 [ scc.git] DEBUG HEAD is now at 3b69bef merge master -Dorg -Snone 2026-08-05 01:38:58,293 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-08-05 01:38:58,709 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-08-05 01:38:59,135 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-08-05 01:39:00,308 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-08-05 01:39:01,150 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-08-05 01:39:01,405 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-08-05 01:39:01,781 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-08-05 01:39:02,067 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-08-05 01:39:02,388 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-08-05 01:39:02,615 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-08-05 01:39:03,131 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-08-05 01:39:03,153 [ scc.git] DEBUG Check current status 2026-08-05 01:39:03,153 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-05 01:39:03,176 [ scc.git] DEBUG 3b69bef merge master -Dorg -Snone 2026-08-05 01:39:03,177 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-05 01:39:03,352 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-05 01:39:03,386 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-05 01:39:03,416 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-08-05 01:39:03,451 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-08-05 01:39:03,492 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-08-05 01:39:03,540 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-05 01:39:03,577 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-05 01:39:03,631 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798cee) 2026-08-05 01:39:03,667 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-05 01:39:03,711 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-08-05 01:39:03,745 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-05 01:39:03,787 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-05 01:39:03,821 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-08-05 01:39:03,855 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-05 01:39:03,889 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-08-05 01:39:03,923 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-05 01:39:03,959 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-08-05 01:39:03,994 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-08-05 01:39:04,027 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-05 01:39:04,058 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-05 01:39:04,090 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-05 01:39:04,111 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-08-05 01:39:04,112 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-08-05 01:39:04,112 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-08-05 01:39:04,112 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-08-05 01:39:04,112 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-08-05 01:39:04,112 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-08-05 01:39:04,112 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-08-05 01:39:04,112 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:39:04,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-08-05 01:39:05,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-08-05 01:39:05,007 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:39:05,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:06,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:39:06,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:07,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:39:07,285 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-05 01:39:07,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-08-05 01:39:07,787 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:39:08,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:08,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:39:09,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:10,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:39:10,035 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-05 01:39:10,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-08-05 01:39:10,561 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:39:11,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:11,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:39:12,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:12,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:39:12,763 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-05 01:39:12,763 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:39:12,763 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:39:12,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:12,777 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:39:12,792 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:39:12,792 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:39:12,813 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:39:12,864 [ scc.git] DEBUG Already up to date. 2026-08-05 01:39:12,864 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-08-05 01:39:13,330 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-05 01:39:13,330 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-08-05 01:39:13,352 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-08-05 01:39:13,741 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-05 01:39:13,741 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-08-05 01:39:13,765 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-08-05 01:39:14,151 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-05 01:39:14,151 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-08-05 01:39:14,175 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:39:14,176 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:39:14,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:14,185 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-05 01:39:14,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:14,217 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-05 01:39:14,268 [ scc.git] DEBUG Already up to date. 2026-08-05 01:39:14,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:39:14,452 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-05 01:39:14,475 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:14,485 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-05 01:39:14,533 [ scc.git] DEBUG Already up to date. 2026-08-05 01:39:14,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:39:14,899 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-05 01:39:14,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:14,932 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-05 01:39:14,981 [ scc.git] DEBUG Already up to date. 2026-08-05 01:39:15,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:39:15,330 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:39:16,158 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:39:16,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:16,170 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:39:16,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-08-05 01:39:16,537 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:39:16,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-08-05 01:39:16,537 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:39:16,537 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:16,553 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:39:16,574 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:39:16,574 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:39:16,598 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:39:16,660 [ scc.git] DEBUG Already up to date. 2026-08-05 01:39:16,660 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:39:16,660 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:39:16,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:16,675 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:39:16,792 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:39:16,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:16,805 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:39:16,908 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:39:16,969 [ scc.git] DEBUG has no local changes 2026-08-05 01:39:16,969 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:39:17,105 [ scc.git] DEBUG [detached HEAD 60a62fe] merge master -Dorg -Ssuccess-only 2026-08-05 01:39:17,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:39:17,106 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:39:17,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-08-05 01:39:17,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-08-05 01:39:17,987 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:39:18,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:19,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:39:19,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:39:20,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:20,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:39:20,621 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:39:21,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-08-05 01:39:21,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-08-05 01:39:21,644 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:39:21,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-08-05 01:39:21,645 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:39:21,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:21,657 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:39:21,673 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:39:21,673 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:39:21,691 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:39:21,742 [ scc.git] DEBUG Already up to date. 2026-08-05 01:39:21,742 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-08-05 01:39:22,137 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-08-05 01:39:22,137 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-08-05 01:39:22,161 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:39:22,161 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:39:22,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:22,174 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-08-05 01:39:22,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:22,206 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-08-05 01:39:22,438 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:39:22,495 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-05 01:39:22,495 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-05 01:39:22,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:39:22,685 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:39:22,793 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:39:22,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:22,806 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:39:22,900 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:39:22,950 [ scc.git] DEBUG has no local changes 2026-08-05 01:39:22,950 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:39:23,140 [ scc.git] DEBUG [detached HEAD 821522c] merge master -Dorg -Ssuccess-only 2026-08-05 01:39:23,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:39:23,143 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:39:23,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-08-05 01:39:24,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-08-05 01:39:24,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-08-05 01:39:25,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:25,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:39:26,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:39:26,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:27,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:39:27,193 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-08-05 01:39:27,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-08-05 01:39:28,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-08-05 01:39:28,275 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:39:28,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-08-05 01:39:28,275 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:39:28,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:28,289 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:39:28,304 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:39:28,304 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:39:28,327 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:39:28,475 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-08-05 01:39:29,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-08-05 01:39:29,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-08-05 01:39:30,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-08-05 01:39:31,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-08-05 01:39:31,630 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-08-05 01:39:32,334 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-08-05 01:39:32,334 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-08-05 01:39:32,360 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:39:32,360 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:39:32,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:32,374 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-08-05 01:39:32,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:32,433 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-08-05 01:39:32,637 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-08-05 01:39:32,715 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:39:32,786 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-08-05 01:39:32,786 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-08-05 01:39:32,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:39:32,987 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:39:33,098 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:39:33,098 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:39:33,111 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:39:33,226 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:39:33,288 [ scc.git] DEBUG has no local changes 2026-08-05 01:39:33,288 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:39:33,440 [ scc.git] DEBUG [detached HEAD 28213e5] merge master -Dorg -Ssuccess-only 2026-08-05 01:39:33,441 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:39:33,441 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:39:33,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-08-05 01:39:34,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/196 HTTP/1.1" 200 None 2026-08-05 01:39:34,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:35,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:39:35,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:39:36,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:37,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/eeaeaa9e3789fce6809def20cd9a43f37f61668f?per_page=1 HTTP/1.1" 200 None 2026-08-05 01:39:37,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:38,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/status HTTP/1.1" 200 None 2026-08-05 01:39:38,162 [ scc.repo] DEBUG - PR 196 will-moore 'Storage options only if needed' 2026-08-05 01:39:38,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/194 HTTP/1.1" 200 None 2026-08-05 01:39:39,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:39,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:39:40,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:39:40,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None 2026-08-05 01:39:41,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:41,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:39:42,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:39:42,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:43,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None 2026-08-05 01:39:43,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:44,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None 2026-08-05 01:39:44,426 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated' 2026-08-05 01:39:44,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-08-05 01:39:45,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-08-05 01:39:46,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:46,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:39:47,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:39:47,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:48,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-08-05 01:39:48,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:49,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-08-05 01:39:49,079 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-08-05 01:39:49,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-08-05 01:39:50,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-08-05 01:39:50,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-08-05 01:39:51,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-08-05 01:39:51,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:52,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:39:52,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:39:53,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:53,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-08-05 01:39:54,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:54,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-08-05 01:39:54,828 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-08-05 01:39:55,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-08-05 01:39:55,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-08-05 01:39:56,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:56,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:39:57,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:39:58,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:58,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-08-05 01:39:59,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-08-05 01:39:59,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-08-05 01:39:59,608 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-08-05 01:40:00,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-08-05 01:40:00,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-08-05 01:40:01,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-08-05 01:40:01,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-08-05 01:40:02,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-08-05 01:40:02,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-08-05 01:40:02,888 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:40:02,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-08-05 01:40:02,889 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:40:02,889 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:40:02,907 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:40:02,925 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:40:02,925 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:40:03,030 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:40:03,405 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-08-05 01:40:04,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-08-05 01:40:04,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-08-05 01:40:05,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-08-05 01:40:06,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-08-05 01:40:07,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-08-05 01:40:08,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-08-05 01:40:08,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-08-05 01:40:09,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-08-05 01:40:10,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-08-05 01:40:11,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-08-05 01:40:12,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-08-05 01:40:13,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-08-05 01:40:13,121 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-08-05 01:40:13,956 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-05 01:40:13,956 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-08-05 01:40:13,985 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-08-05 01:40:14,517 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-05 01:40:14,518 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-08-05 01:40:14,539 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-08-05 01:40:14,989 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-05 01:40:14,989 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-08-05 01:40:15,012 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head' 2026-08-05 01:40:15,436 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-05 01:40:15,436 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD 2026-08-05 01:40:15,460 [ scc.git] DEBUG Calling 'git fetch origin pull/196/head' 2026-08-05 01:40:16,018 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-05 01:40:16,018 [ scc.git] DEBUG * branch refs/pull/196/head -> FETCH_HEAD 2026-08-05 01:40:16,040 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:40:16,040 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:40:16,040 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:40:16,052 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-08-05 01:40:16,098 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:40:16,109 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-08-05 01:40:16,509 [ scc.git] DEBUG Auto-merging README.rst 2026-08-05 01:40:16,509 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-08-05 01:40:16,509 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-08-05 01:40:16,509 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-08-05 01:40:16,509 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-08-05 01:40:16,509 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-08-05 01:40:16,509 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-08-05 01:40:16,509 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-08-05 01:40:16,509 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-08-05 01:40:16,509 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-08-05 01:40:16,509 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-08-05 01:40:16,535 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-05 01:40:16,536 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-05 01:40:16,568 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-05 01:40:16,771 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-05 01:40:16,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:40:16,966 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-08-05 01:40:17,004 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-05 01:40:17,024 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#31](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/consoleText) for more details. Possible conflicts: - Upstream changes - test/integration/clitest/test_export.py - src/omero_zarr/masks.py - src/omero_zarr/raw_pixels.py - src/omero_zarr/cli.py - src/omero_zarr/util.py --conflicts 2026-08-05 01:40:17,036 [ scc.config] DEBUG Found github.token 2026-08-05 01:40:17,036 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-08-05 01:40:17,036 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-08-05 01:40:17,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:40:17,093 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-08-05 01:40:17,351 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-08-05 01:40:17,352 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-08-05 01:40:17,352 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-08-05 01:40:17,352 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-08-05 01:40:17,379 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-05 01:40:17,380 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-05 01:40:17,408 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-05 01:40:17,547 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-05 01:40:17,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:40:17,783 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-08-05 01:40:17,817 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-05 01:40:17,839 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#31](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - src/omero_zarr/masks.py - test/integration/clitest/test_export.py --conflicts 2026-08-05 01:40:17,851 [ scc.config] DEBUG Found github.token 2026-08-05 01:40:17,851 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-08-05 01:40:17,851 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-08-05 01:40:17,890 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:40:17,903 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-08-05 01:40:18,156 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-08-05 01:40:18,156 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-08-05 01:40:18,156 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-08-05 01:40:18,156 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-08-05 01:40:18,156 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-08-05 01:40:18,183 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-05 01:40:18,184 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-05 01:40:18,214 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-05 01:40:18,351 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-05 01:40:18,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:40:18,531 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-08-05 01:40:18,560 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-05 01:40:18,578 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#31](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/consoleText) for more details. Possible conflicts: - Upstream changes - test/integration/clitest/test_import.py - src/omero_zarr/zarr_import.py --conflicts 2026-08-05 01:40:18,589 [ scc.config] DEBUG Found github.token 2026-08-05 01:40:18,589 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-08-05 01:40:18,589 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-08-05 01:40:18,615 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:40:18,626 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-08-05 01:40:18,842 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:40:18,899 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++ 2026-08-05 01:40:18,899 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++------------------- 2026-08-05 01:40:18,899 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-) 2026-08-05 01:40:19,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:40:19,101 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eeaeaa9e3789fce6809def20cd9a43f37f61668f' 2026-08-05 01:40:19,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:40:19,164 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 196 (Storage options only if needed) eeaeaa9e3789fce6809def20cd9a43f37f61668f' 2026-08-05 01:40:19,524 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-08-05 01:40:19,603 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:40:19,710 [ scc.git] DEBUG .pre-commit-config.yaml | 2 +- 2026-08-05 01:40:19,710 [ scc.git] DEBUG src/omero_zarr/masks.py | 10 ++++++++++ 2026-08-05 01:40:19,710 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 6 ++---- 2026-08-05 01:40:19,710 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 3 ++- 2026-08-05 01:40:19,710 [ scc.git] DEBUG test/integration/clitest/test_export.py | 2 +- 2026-08-05 01:40:19,710 [ scc.git] DEBUG 5 files changed, 16 insertions(+), 7 deletions(-) 2026-08-05 01:40:19,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:40:19,899 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:40:20,009 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:40:20,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:40:20,022 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:40:20,115 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:40:20,194 [ scc.git] DEBUG has no local changes 2026-08-05 01:40:20,194 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' - PR 196 will-moore 'Storage options only if needed' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:40:20,378 [ scc.git] DEBUG [detached HEAD bda5b11] merge master -Dorg -Ssuccess-only 2026-08-05 01:40:20,380 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:40:20,380 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:40:20,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-08-05 01:40:21,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/697 HTTP/1.1" 200 None 2026-08-05 01:40:21,356 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:40:22,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e22b8589ae3295c8a4cd88df953c991f41074487?page=1 HTTP/1.1" 200 None 2026-08-05 01:40:22,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e22b8589ae3295c8a4cd88df953c991f41074487/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:40:23,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e22b8589ae3295c8a4cd88df953c991f41074487/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:40:23,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e22b8589ae3295c8a4cd88df953c991f41074487?page=1 HTTP/1.1" 200 None 2026-08-05 01:40:24,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e22b8589ae3295c8a4cd88df953c991f41074487?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:40:24,122 [ scc.repo] DEBUG - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' 2026-08-05 01:40:24,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/696 HTTP/1.1" 200 None 2026-08-05 01:40:24,648 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:40:25,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226?page=1 HTTP/1.1" 200 None 2026-08-05 01:40:25,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:40:26,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:40:26,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/abde8720db39ce43974f7b5c8d717eb52472b226?page=1 HTTP/1.1" 200 None 2026-08-05 01:40:27,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/abde8720db39ce43974f7b5c8d717eb52472b226?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:40:27,350 [ scc.repo] DEBUG - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' 2026-08-05 01:40:27,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/695 HTTP/1.1" 200 None 2026-08-05 01:40:27,886 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:40:28,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8?page=1 HTTP/1.1" 200 None 2026-08-05 01:40:29,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:40:29,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:40:30,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6a1c677b187fbe3fefabeebba659660e1c08dad8?page=1 HTTP/1.1" 200 None 2026-08-05 01:40:30,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6a1c677b187fbe3fefabeebba659660e1c08dad8?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:40:30,526 [ scc.repo] DEBUG - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' 2026-08-05 01:40:31,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/692 HTTP/1.1" 200 None 2026-08-05 01:40:31,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2?page=1 HTTP/1.1" 200 None 2026-08-05 01:40:32,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:40:32,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:40:33,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2?page=1 HTTP/1.1" 200 None 2026-08-05 01:40:33,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/123f30064dc116c09098786206e54f8ec811c2c2?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:40:33,527 [ scc.repo] DEBUG - PR 692 will-moore 'colorbar lut background fix' 2026-08-05 01:40:34,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-08-05 01:40:34,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-08-05 01:40:34,534 [ scc.repo] DEBUG # ... Include label: include 2026-08-05 01:40:35,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-08-05 01:40:35,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:40:36,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:40:36,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-08-05 01:40:37,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:40:37,089 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-08-05 01:40:37,089 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:40:37,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-08-05 01:40:37,090 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:40:37,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:40:37,109 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:40:37,123 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:40:37,123 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:40:37,233 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:40:38,500 [ scc.git] DEBUG Updating 9cc36cde..18887279 2026-08-05 01:40:39,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/693 HTTP/1.1" 200 None 2026-08-05 01:40:39,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/691 HTTP/1.1" 200 None 2026-08-05 01:40:40,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/686 HTTP/1.1" 200 None 2026-08-05 01:40:41,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/690 HTTP/1.1" 200 None 2026-08-05 01:40:42,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/681 HTTP/1.1" 200 None 2026-08-05 01:40:43,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/688 HTTP/1.1" 200 None 2026-08-05 01:40:43,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/685 HTTP/1.1" 200 None 2026-08-05 01:40:44,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/683 HTTP/1.1" 200 None 2026-08-05 01:40:45,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/680 HTTP/1.1" 200 None 2026-08-05 01:40:46,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/684 HTTP/1.1" 200 None 2026-08-05 01:40:47,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/682 HTTP/1.1" 200 None 2026-08-05 01:40:48,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/679 HTTP/1.1" 200 None 2026-08-05 01:40:48,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/677 HTTP/1.1" 200 None 2026-08-05 01:40:49,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/666 HTTP/1.1" 200 None 2026-08-05 01:40:50,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/676 HTTP/1.1" 200 None 2026-08-05 01:40:51,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/669 HTTP/1.1" 200 None 2026-08-05 01:40:52,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/662 HTTP/1.1" 200 None 2026-08-05 01:40:53,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/663 HTTP/1.1" 200 None 2026-08-05 01:40:54,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-08-05 01:40:54,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-08-05 01:40:55,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-08-05 01:40:56,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-08-05 01:40:57,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-08-05 01:40:58,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-08-05 01:40:58,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-08-05 01:40:59,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-08-05 01:41:00,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-08-05 01:41:01,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-08-05 01:41:02,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-08-05 01:41:03,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-08-05 01:41:03,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-08-05 01:41:04,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-08-05 01:41:05,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-08-05 01:41:06,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-08-05 01:41:07,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-08-05 01:41:08,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-08-05 01:41:09,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-08-05 01:41:10,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-08-05 01:41:10,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-08-05 01:41:11,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-08-05 01:41:12,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-08-05 01:41:13,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-08-05 01:41:14,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-08-05 01:41:15,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-08-05 01:41:16,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-08-05 01:41:17,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-08-05 01:41:18,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-08-05 01:41:18,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-08-05 01:41:19,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-08-05 01:41:20,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-08-05 01:41:20,717 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-08-05 01:41:21,387 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-05 01:41:21,387 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-08-05 01:41:21,412 [ scc.git] DEBUG Calling 'git fetch origin pull/692/head' 2026-08-05 01:41:21,859 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-05 01:41:21,859 [ scc.git] DEBUG * branch refs/pull/692/head -> FETCH_HEAD 2026-08-05 01:41:21,887 [ scc.git] DEBUG Calling 'git fetch origin pull/695/head' 2026-08-05 01:41:22,340 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-05 01:41:22,340 [ scc.git] DEBUG * branch refs/pull/695/head -> FETCH_HEAD 2026-08-05 01:41:22,365 [ scc.git] DEBUG Calling 'git fetch origin pull/696/head' 2026-08-05 01:41:22,786 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-05 01:41:22,786 [ scc.git] DEBUG * branch refs/pull/696/head -> FETCH_HEAD 2026-08-05 01:41:22,813 [ scc.git] DEBUG Calling 'git fetch origin pull/697/head' 2026-08-05 01:41:23,234 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-05 01:41:23,234 [ scc.git] DEBUG * branch refs/pull/697/head -> FETCH_HEAD 2026-08-05 01:41:23,259 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:41:23,259 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:41:23,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:41:23,274 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-08-05 01:41:23,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:41:23,380 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-08-05 01:41:23,790 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-08-05 01:41:23,790 [ scc.git] DEBUG Auto-merging src/index.html 2026-08-05 01:41:23,790 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-08-05 01:41:23,863 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:41:23,939 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-08-05 01:41:23,940 [ scc.git] DEBUG src/index.html | 11 ++ 2026-08-05 01:41:23,940 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-08-05 01:41:23,940 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-08-05 01:41:24,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:41:24,132 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...123f30064dc116c09098786206e54f8ec811c2c2' 2026-08-05 01:41:24,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:41:24,198 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 692 (colorbar lut background fix) 123f30064dc116c09098786206e54f8ec811c2c2' 2026-08-05 01:41:24,527 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:41:24,616 [ scc.git] DEBUG src/js/views/panel_view.js | 5 +++++ 2026-08-05 01:41:24,616 [ scc.git] DEBUG src/templates/colorbar.template.html | 2 +- 2026-08-05 01:41:24,616 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 1 deletion(-) 2026-08-05 01:41:24,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:41:24,821 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a1c677b187fbe3fefabeebba659660e1c08dad8' 2026-08-05 01:41:24,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:41:24,910 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 695 (Bump immutable from 5.1.6 to 5.1.9) 6a1c677b187fbe3fefabeebba659660e1c08dad8' 2026-08-05 01:41:25,210 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:41:25,281 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-08-05 01:41:25,281 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-08-05 01:41:25,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:41:25,488 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...abde8720db39ce43974f7b5c8d717eb52472b226' 2026-08-05 01:41:25,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:41:25,576 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 696 (Bump dompurify from 3.4.9 to 3.4.12) abde8720db39ce43974f7b5c8d717eb52472b226' 2026-08-05 01:41:25,921 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-05 01:41:26,011 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:41:26,079 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2026-08-05 01:41:26,079 [ scc.git] DEBUG package.json | 2 +- 2026-08-05 01:41:26,080 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2026-08-05 01:41:26,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:41:26,269 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e22b8589ae3295c8a4cd88df953c991f41074487' 2026-08-05 01:41:26,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:41:26,349 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 697 (Bump postcss from 8.5.15 to 8.5.25) e22b8589ae3295c8a4cd88df953c991f41074487' 2026-08-05 01:41:26,632 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-05 01:41:26,704 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:41:26,767 [ scc.git] DEBUG package-lock.json | 14 +++++++------- 2026-08-05 01:41:26,767 [ scc.git] DEBUG 1 file changed, 7 insertions(+), 7 deletions(-) 2026-08-05 01:41:26,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:41:26,970 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:41:27,090 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:41:27,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:41:27,103 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:41:27,203 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:41:27,330 [ scc.git] DEBUG has no local changes 2026-08-05 01:41:27,330 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Updating 9cc36cde..18887279 Previously merged: - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 692 will-moore 'colorbar lut background fix' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:41:27,495 [ scc.git] DEBUG [detached HEAD 749db8d1] merge master -Dorg -Ssuccess-only 2026-08-05 01:41:27,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:41:27,496 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:41:27,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-08-05 01:41:28,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-08-05 01:41:28,368 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:41:29,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:30,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:41:30,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:41:31,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:31,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:41:31,527 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:41:32,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-08-05 01:41:32,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-08-05 01:41:33,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:33,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:41:34,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:34,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:41:34,812 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-08-05 01:41:34,812 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:41:34,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-08-05 01:41:34,813 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:41:34,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:41:34,833 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:41:34,850 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:41:34,850 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:41:34,872 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:41:34,927 [ scc.git] DEBUG Already up to date. 2026-08-05 01:41:34,927 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-08-05 01:41:35,413 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-08-05 01:41:35,413 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-08-05 01:41:35,435 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-08-05 01:41:35,801 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-08-05 01:41:35,801 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-08-05 01:41:35,829 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:41:35,829 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:41:35,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:41:35,844 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-08-05 01:41:35,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:41:35,887 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-08-05 01:41:36,031 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-08-05 01:41:36,160 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:41:36,229 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-08-05 01:41:36,229 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-08-05 01:41:36,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:41:36,421 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-08-05 01:41:36,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:41:36,465 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-08-05 01:41:36,647 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:41:36,717 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-05 01:41:36,717 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-05 01:41:36,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:41:36,908 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:41:37,013 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:41:37,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:41:37,026 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:41:37,118 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:41:37,175 [ scc.git] DEBUG has no local changes 2026-08-05 01:41:37,175 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:41:37,316 [ scc.git] DEBUG [detached HEAD e2c815e] merge master -Dorg -Ssuccess-only 2026-08-05 01:41:37,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:41:37,317 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:41:37,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-08-05 01:41:38,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-08-05 01:41:38,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-08-05 01:41:39,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-08-05 01:41:39,229 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:41:39,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:40,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:41:40,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:41,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:41:41,323 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-08-05 01:41:41,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-08-05 01:41:42,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-08-05 01:41:42,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-08-05 01:41:42,926 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:41:43,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:44,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:41:44,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:45,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:41:45,035 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-08-05 01:41:45,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-08-05 01:41:45,559 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:41:46,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:46,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:41:47,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:47,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:41:47,603 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-08-05 01:41:48,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-08-05 01:41:48,102 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:41:48,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:49,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:41:49,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:50,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:41:50,286 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-08-05 01:41:50,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-08-05 01:41:51,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-08-05 01:41:51,292 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:41:52,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:52,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:41:53,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:53,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:41:53,595 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-08-05 01:41:54,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-08-05 01:41:54,116 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:41:54,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:55,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:41:55,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:56,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:41:56,269 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-08-05 01:41:56,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-08-05 01:41:56,776 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:41:57,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:57,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:41:58,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-08-05 01:41:58,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:41:58,872 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-08-05 01:41:58,872 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:41:58,873 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-08-05 01:41:58,874 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:41:58,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:41:58,895 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:41:58,920 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:41:58,920 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:41:58,941 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:41:58,999 [ scc.git] DEBUG Already up to date. 2026-08-05 01:41:58,999 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-08-05 01:41:59,407 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-05 01:41:59,407 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-08-05 01:41:59,431 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-08-05 01:41:59,807 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-05 01:41:59,807 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-08-05 01:41:59,828 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-08-05 01:42:00,206 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-05 01:42:00,206 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-08-05 01:42:00,229 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-08-05 01:42:00,601 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-05 01:42:00,601 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-08-05 01:42:00,626 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-08-05 01:42:01,018 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-05 01:42:01,018 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-08-05 01:42:01,041 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-08-05 01:42:01,419 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-05 01:42:01,419 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-08-05 01:42:01,440 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-08-05 01:42:01,833 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-05 01:42:01,833 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-08-05 01:42:01,854 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:42:01,854 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:42:01,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:42:01,866 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-08-05 01:42:01,884 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:42:01,895 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-08-05 01:42:02,118 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:42:02,186 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-08-05 01:42:02,186 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-08-05 01:42:02,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:42:02,396 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-08-05 01:42:02,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:42:02,432 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-08-05 01:42:02,580 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-05 01:42:02,653 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:42:02,712 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-08-05 01:42:02,712 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-08-05 01:42:02,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:42:02,906 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-08-05 01:42:02,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:42:02,961 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-08-05 01:42:03,179 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-05 01:42:03,179 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-05 01:42:03,208 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-05 01:42:03,209 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-05 01:42:03,240 [ scc.git] DEBUG Calling 'git reset --hard e027b3193b471ad9898b5ed0de4faf2699585de0' 2026-08-05 01:42:03,406 [ scc.git] DEBUG HEAD is now at e027b31 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-08-05 01:42:03,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:42:03,598 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-08-05 01:42:03,619 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-08-05 01:42:03,638 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#31](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-08-05 01:42:03,649 [ scc.config] DEBUG Found github.token 2026-08-05 01:42:03,649 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-08-05 01:42:03,649 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-08-05 01:42:03,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:42:03,692 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-08-05 01:42:03,879 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-05 01:42:03,987 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:42:04,064 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-08-05 01:42:04,064 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-08-05 01:42:04,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:42:04,259 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-08-05 01:42:04,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:42:04,297 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-08-05 01:42:04,423 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-05 01:42:04,540 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:42:04,609 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-08-05 01:42:04,609 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-08-05 01:42:04,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:42:04,816 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-08-05 01:42:04,843 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:42:04,856 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-08-05 01:42:05,034 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-05 01:42:05,034 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-05 01:42:05,072 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-05 01:42:05,073 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-05 01:42:05,098 [ scc.git] DEBUG Calling 'git reset --hard 62db56542c28e387cf48823d9a88252c8b5f729a' 2026-08-05 01:42:05,256 [ scc.git] DEBUG HEAD is now at 62db565 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-08-05 01:42:05,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:42:05,460 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-08-05 01:42:05,480 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-08-05 01:42:05,495 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#31](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-08-05 01:42:05,506 [ scc.config] DEBUG Found github.token 2026-08-05 01:42:05,506 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-08-05 01:42:05,506 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-08-05 01:42:05,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:42:05,544 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-08-05 01:42:05,709 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-05 01:42:05,709 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-05 01:42:05,731 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-05 01:42:05,732 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-05 01:42:05,758 [ scc.git] DEBUG Calling 'git reset --hard 62db56542c28e387cf48823d9a88252c8b5f729a' 2026-08-05 01:42:05,884 [ scc.git] DEBUG HEAD is now at 62db565 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-08-05 01:42:06,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:42:06,092 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-08-05 01:42:06,116 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-08-05 01:42:06,136 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#31](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-08-05 01:42:06,148 [ scc.config] DEBUG Found github.token 2026-08-05 01:42:06,148 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-08-05 01:42:06,148 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:42:06,257 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:42:06,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:42:06,270 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:42:06,368 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:42:06,436 [ scc.git] DEBUG has no local changes 2026-08-05 01:42:06,436 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:42:06,592 [ scc.git] DEBUG [detached HEAD e299f4a] merge master -Dorg -Ssuccess-only 2026-08-05 01:42:06,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:42:06,593 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:42:06,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-08-05 01:42:07,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/546 HTTP/1.1" 200 None 2026-08-05 01:42:08,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?page=1 HTTP/1.1" 200 None 2026-08-05 01:42:08,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:42:09,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:42:09,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?page=1 HTTP/1.1" 200 None 2026-08-05 01:42:10,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:42:10,050 [ scc.repo] DEBUG - PR 546 will-moore 'Use POST data for saveImgRdef params' 2026-08-05 01:42:10,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532 HTTP/1.1" 200 None 2026-08-05 01:42:11,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532/comments HTTP/1.1" 200 None 2026-08-05 01:42:11,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-08-05 01:42:12,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:42:12,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:42:13,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-08-05 01:42:13,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:42:13,599 [ scc.repo] DEBUG - PR 532 will-moore 'Zarr layers' 2026-08-05 01:42:14,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-08-05 01:42:14,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-08-05 01:42:15,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-08-05 01:42:15,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:42:16,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-08-05 01:42:16,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:42:16,772 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-08-05 01:42:16,773 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:42:16,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-08-05 01:42:16,774 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:42:16,774 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:42:16,795 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:42:16,823 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:42:16,823 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:42:16,959 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:42:17,648 [ scc.git] DEBUG Updating 7a798cee..177e4b5e 2026-08-05 01:42:18,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/541 HTTP/1.1" 200 None 2026-08-05 01:42:19,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/556 HTTP/1.1" 200 None 2026-08-05 01:42:19,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/554 HTTP/1.1" 200 None 2026-08-05 01:42:20,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/553 HTTP/1.1" 200 None 2026-08-05 01:42:21,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/552 HTTP/1.1" 200 None 2026-08-05 01:42:22,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/551 HTTP/1.1" 200 None 2026-08-05 01:42:22,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/550 HTTP/1.1" 200 None 2026-08-05 01:42:23,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/549 HTTP/1.1" 200 None 2026-08-05 01:42:24,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/548 HTTP/1.1" 200 None 2026-08-05 01:42:25,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/547 HTTP/1.1" 200 None 2026-08-05 01:42:25,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/540 HTTP/1.1" 200 None 2026-08-05 01:42:26,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/539 HTTP/1.1" 200 None 2026-08-05 01:42:27,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/537 HTTP/1.1" 200 None 2026-08-05 01:42:28,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/535 HTTP/1.1" 200 None 2026-08-05 01:42:29,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/527 HTTP/1.1" 200 None 2026-08-05 01:42:29,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/534 HTTP/1.1" 200 None 2026-08-05 01:42:30,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/533 HTTP/1.1" 200 None 2026-08-05 01:42:31,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/530 HTTP/1.1" 200 None 2026-08-05 01:42:32,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/528 HTTP/1.1" 200 None 2026-08-05 01:42:33,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/529 HTTP/1.1" 200 None 2026-08-05 01:42:34,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/526 HTTP/1.1" 200 None 2026-08-05 01:42:35,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/525 HTTP/1.1" 200 None 2026-08-05 01:42:35,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/524 HTTP/1.1" 200 None 2026-08-05 01:42:36,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/523 HTTP/1.1" 200 None 2026-08-05 01:42:37,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/522 HTTP/1.1" 200 None 2026-08-05 01:42:38,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/521 HTTP/1.1" 200 None 2026-08-05 01:42:38,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/520 HTTP/1.1" 200 None 2026-08-05 01:42:39,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/519 HTTP/1.1" 200 None 2026-08-05 01:42:40,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/518 HTTP/1.1" 200 None 2026-08-05 01:42:41,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/514 HTTP/1.1" 200 None 2026-08-05 01:42:42,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/513 HTTP/1.1" 200 None 2026-08-05 01:42:43,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/512 HTTP/1.1" 200 None 2026-08-05 01:42:43,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/465 HTTP/1.1" 200 None 2026-08-05 01:42:44,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/517 HTTP/1.1" 200 None 2026-08-05 01:42:45,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/516 HTTP/1.1" 200 None 2026-08-05 01:42:46,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-08-05 01:42:47,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-08-05 01:42:47,405 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-08-05 01:42:47,928 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-05 01:42:47,928 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-08-05 01:42:47,954 [ scc.git] DEBUG Calling 'git fetch origin pull/532/head' 2026-08-05 01:42:48,415 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-05 01:42:48,415 [ scc.git] DEBUG * branch refs/pull/532/head -> FETCH_HEAD 2026-08-05 01:42:48,442 [ scc.git] DEBUG Calling 'git fetch origin pull/546/head' 2026-08-05 01:42:48,903 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-05 01:42:48,903 [ scc.git] DEBUG * branch refs/pull/546/head -> FETCH_HEAD 2026-08-05 01:42:48,929 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:42:48,929 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:42:48,929 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:42:48,963 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-08-05 01:42:49,015 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:42:49,028 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-08-05 01:42:49,331 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-08-05 01:42:49,414 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:42:49,491 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-08-05 01:42:49,492 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-08-05 01:42:49,492 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-08-05 01:42:49,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:42:49,693 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-08-05 01:42:49,741 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:42:49,754 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 532 (Zarr layers) fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-08-05 01:42:50,795 [ scc.git] DEBUG Auto-merging css/app.css 2026-08-05 01:42:50,795 [ scc.git] DEBUG CONFLICT (content): Merge conflict in css/app.css 2026-08-05 01:42:50,795 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-05 01:42:50,795 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-05 01:42:50,795 [ scc.git] DEBUG Auto-merging package.json 2026-08-05 01:42:50,795 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-08-05 01:42:50,795 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-08-05 01:42:50,795 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-08-05 01:42:50,795 [ scc.git] DEBUG Auto-merging src/viewers/viewer/source/Image.js 2026-08-05 01:42:50,795 [ scc.git] DEBUG Auto-merging webpack.dev.config.js 2026-08-05 01:42:50,831 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-05 01:42:50,834 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-05 01:42:50,908 [ scc.git] DEBUG Calling 'git reset --hard 87d44b1e7a585655bdc0e3a2d08c46070499769e' 2026-08-05 01:42:51,367 [ scc.git] DEBUG HEAD is now at 87d44b1e merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 2026-08-05 01:42:51,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:42:51,550 [ scc.git] DEBUG Calling 'git merge-base 177e4b5ec04efe2a2d2e083159f678d8bd747db3 fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-08-05 01:42:51,595 [ scc.git] DEBUG Calling 'git diff --name-only 0b7eaf71f7e3f5c7289fab4bf857094bdadce1e4..177e4b5ec04efe2a2d2e083159f678d8bd747db3' 2026-08-05 01:42:51,632 [ scc.git] INFO - PR 532 will-moore 'Zarr layers' Conflicting PR. Removed from build [OMERO-plugins-push#31](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/consoleText) for more details. Possible conflicts: - Upstream changes - package-lock.json - css/app.css --conflicts 2026-08-05 01:42:51,644 [ scc.config] DEBUG Found github.token 2026-08-05 01:42:51,644 [ scc.git] DEBUG Not adding comment to issue #532, already --conflicts. 2026-08-05 01:42:51,644 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf1523e8c6e3d91d8b862eb49a5b679caa796c78' 2026-08-05 01:42:51,693 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:42:51,706 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 546 (Use POST data for saveImgRdef params) cf1523e8c6e3d91d8b862eb49a5b679caa796c78' 2026-08-05 01:42:52,058 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-08-05 01:42:52,134 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:42:52,220 [ scc.git] DEBUG src/model/image_config.js | 7 ++++--- 2026-08-05 01:42:52,220 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 3 deletions(-) 2026-08-05 01:42:52,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:42:52,411 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:42:52,516 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:42:52,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:42:52,532 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:42:52,626 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:42:52,707 [ scc.git] DEBUG has no local changes 2026-08-05 01:42:52,707 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..177e4b5e Previously merged: - PR 541 will-moore 'Only add channel to tile request string if active' - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 546 will-moore 'Use POST data for saveImgRdef params' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:42:52,944 [ scc.git] DEBUG [detached HEAD 905608bd] merge master -Dorg -Ssuccess-only 2026-08-05 01:42:52,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:42:52,947 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:42:53,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-08-05 01:42:53,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-08-05 01:42:54,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-08-05 01:42:54,316 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:42:54,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-08-05 01:42:55,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:42:55,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:42:56,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-08-05 01:42:56,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:42:56,973 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:42:57,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-08-05 01:42:58,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-08-05 01:42:58,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:42:59,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-08-05 01:42:59,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:42:59,467 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-05 01:42:59,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-08-05 01:43:00,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-08-05 01:43:01,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:01,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:43:02,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:02,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:43:02,487 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-08-05 01:43:02,487 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:43:02,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-08-05 01:43:02,488 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:02,488 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:02,510 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:43:02,528 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:43:02,528 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:43:02,546 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:43:02,605 [ scc.git] DEBUG Already up to date. 2026-08-05 01:43:02,605 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-08-05 01:43:03,015 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-08-05 01:43:03,015 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-08-05 01:43:03,038 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-08-05 01:43:03,466 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-08-05 01:43:03,466 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-08-05 01:43:03,491 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-08-05 01:43:03,860 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-08-05 01:43:03,860 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-08-05 01:43:03,884 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:43:03,884 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:03,884 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:03,897 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-08-05 01:43:03,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:03,933 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-08-05 01:43:04,195 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:43:04,259 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-08-05 01:43:04,259 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-08-05 01:43:04,259 [ scc.git] DEBUG requirements.txt | 2 +- 2026-08-05 01:43:04,259 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-08-05 01:43:04,259 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-08-05 01:43:04,259 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-08-05 01:43:04,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:43:04,459 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-08-05 01:43:04,495 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:04,508 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-08-05 01:43:04,708 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:43:04,774 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-05 01:43:04,774 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-05 01:43:04,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:43:04,977 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-08-05 01:43:05,008 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:05,020 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-08-05 01:43:05,206 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-08-05 01:43:05,206 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-08-05 01:43:05,238 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-05 01:43:05,240 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-05 01:43:05,267 [ scc.git] DEBUG Calling 'git reset --hard f416b1de768ff426cebdfdccef7d16b1680ae17f' 2026-08-05 01:43:05,415 [ scc.git] DEBUG HEAD is now at f416b1d merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-08-05 01:43:05,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:43:05,612 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-08-05 01:43:05,639 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-08-05 01:43:05,658 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#31](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-08-05 01:43:05,668 [ scc.config] DEBUG Found github.token 2026-08-05 01:43:05,668 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-08-05 01:43:05,668 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:43:05,766 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:05,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:05,777 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:43:05,872 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:43:05,948 [ scc.git] DEBUG has no local changes 2026-08-05 01:43:05,948 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:43:06,103 [ scc.git] DEBUG [detached HEAD 68f6c86] merge master -Dorg -Ssuccess-only 2026-08-05 01:43:06,105 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:43:06,105 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:43:06,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-08-05 01:43:07,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-08-05 01:43:07,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-08-05 01:43:08,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:08,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:43:09,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:09,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:43:09,826 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-08-05 01:43:10,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-08-05 01:43:10,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-08-05 01:43:11,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:12,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:43:12,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:12,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:43:12,971 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-08-05 01:43:13,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-08-05 01:43:14,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-08-05 01:43:14,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:15,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:43:15,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:16,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:43:16,018 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-08-05 01:43:16,018 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:43:16,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-08-05 01:43:16,019 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:16,019 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:16,041 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:43:16,063 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:43:16,063 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:43:16,086 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:43:16,229 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-08-05 01:43:16,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-08-05 01:43:16,847 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-08-05 01:43:17,441 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-08-05 01:43:17,441 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-08-05 01:43:17,470 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-08-05 01:43:18,172 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-08-05 01:43:18,172 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-08-05 01:43:18,203 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-08-05 01:43:18,617 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-08-05 01:43:18,617 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-08-05 01:43:18,643 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:43:18,644 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:18,644 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:18,661 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-08-05 01:43:18,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:18,721 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-08-05 01:43:18,982 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-08-05 01:43:18,982 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-08-05 01:43:18,982 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-08-05 01:43:18,982 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-08-05 01:43:19,005 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-05 01:43:19,006 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-05 01:43:19,027 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-08-05 01:43:19,164 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-08-05 01:43:19,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:43:19,348 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-08-05 01:43:19,379 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-08-05 01:43:19,400 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#31](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2026-08-05 01:43:19,411 [ scc.config] DEBUG Found github.token 2026-08-05 01:43:19,411 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-08-05 01:43:19,411 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-08-05 01:43:19,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:19,473 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-08-05 01:43:19,750 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-08-05 01:43:19,750 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-08-05 01:43:19,750 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-08-05 01:43:19,778 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-05 01:43:19,780 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-05 01:43:19,821 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-08-05 01:43:19,973 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-08-05 01:43:20,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:43:20,158 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-08-05 01:43:20,194 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-08-05 01:43:20,217 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#31](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-08-05 01:43:20,228 [ scc.config] DEBUG Found github.token 2026-08-05 01:43:20,228 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-08-05 01:43:20,228 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-08-05 01:43:20,255 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:20,268 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-08-05 01:43:20,461 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:43:20,526 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-08-05 01:43:20,526 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-08-05 01:43:20,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:43:20,881 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:43:21,003 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:21,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:21,019 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:43:21,132 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:43:21,191 [ scc.git] DEBUG has no local changes 2026-08-05 01:43:21,191 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:43:21,325 [ scc.git] DEBUG [detached HEAD e8229f4] merge master -Dorg -Ssuccess-only 2026-08-05 01:43:21,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:43:21,326 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:43:21,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-08-05 01:43:22,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-08-05 01:43:22,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:23,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:43:23,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:24,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:43:24,299 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-05 01:43:24,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-08-05 01:43:24,950 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:43:25,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:26,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:43:26,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:27,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:43:27,386 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-08-05 01:43:27,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-08-05 01:43:27,904 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:43:28,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:29,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:43:29,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:30,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:43:30,039 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-08-05 01:43:30,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-08-05 01:43:31,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-08-05 01:43:31,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-08-05 01:43:32,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-08-05 01:43:32,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-08-05 01:43:33,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-08-05 01:43:33,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-08-05 01:43:33,660 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:43:33,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-08-05 01:43:33,661 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:33,661 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:33,680 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:43:33,699 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:43:33,699 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:43:33,720 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:43:33,784 [ scc.git] DEBUG Already up to date. 2026-08-05 01:43:33,785 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-08-05 01:43:34,476 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-08-05 01:43:34,476 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-08-05 01:43:34,497 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-08-05 01:43:34,873 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-08-05 01:43:34,873 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-08-05 01:43:34,896 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-08-05 01:43:35,297 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-08-05 01:43:35,297 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-08-05 01:43:35,318 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:43:35,318 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:35,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:35,330 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-08-05 01:43:35,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:35,362 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-08-05 01:43:35,672 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:43:35,746 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-08-05 01:43:35,747 [ scc.git] DEBUG package.json | 2 +- 2026-08-05 01:43:35,747 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-08-05 01:43:35,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:43:35,941 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-08-05 01:43:35,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:35,980 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-08-05 01:43:36,153 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-05 01:43:36,154 [ scc.git] DEBUG Auto-merging package.json 2026-08-05 01:43:36,242 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:43:36,311 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-08-05 01:43:36,311 [ scc.git] DEBUG package.json | 2 +- 2026-08-05 01:43:36,311 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-08-05 01:43:36,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:43:36,508 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-08-05 01:43:36,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:36,561 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-08-05 01:43:36,797 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:43:36,874 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-05 01:43:36,875 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-05 01:43:37,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:43:37,069 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:43:37,187 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:37,187 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:37,200 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:43:37,304 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:43:37,371 [ scc.git] DEBUG has no local changes 2026-08-05 01:43:37,371 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:43:37,546 [ scc.git] DEBUG [detached HEAD a0dc11c] merge master -Dorg -Ssuccess-only 2026-08-05 01:43:37,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:43:37,548 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:43:37,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-08-05 01:43:38,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-08-05 01:43:38,355 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:43:39,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:39,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:43:40,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:43:40,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:41,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:43:41,139 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:43:41,139 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:43:41,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-08-05 01:43:41,140 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:41,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:41,159 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:43:41,177 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:43:41,177 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:43:41,199 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:43:41,258 [ scc.git] DEBUG Already up to date. 2026-08-05 01:43:41,258 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-08-05 01:43:41,645 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-08-05 01:43:41,645 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-08-05 01:43:41,668 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:43:41,668 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:41,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:41,682 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-08-05 01:43:41,705 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:41,718 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-08-05 01:43:41,894 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:43:41,958 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-05 01:43:41,958 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-05 01:43:42,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:43:42,142 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:43:42,265 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:42,266 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:42,280 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:43:42,384 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:43:42,431 [ scc.git] DEBUG has no local changes 2026-08-05 01:43:42,432 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:43:42,574 [ scc.git] DEBUG [detached HEAD e9fbe27] merge master -Dorg -Ssuccess-only 2026-08-05 01:43:42,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:43:42,576 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:43:42,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-08-05 01:43:43,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-08-05 01:43:43,405 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:43:43,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-08-05 01:43:43,407 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:43,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:43,427 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:43:43,444 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:43:43,444 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:43:43,484 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:43:43,752 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-08-05 01:43:44,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-08-05 01:43:45,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-08-05 01:43:45,353 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:43:45,353 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:45,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:45,372 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:43:45,484 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:45,484 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:45,496 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:43:45,590 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:43:45,652 [ scc.git] DEBUG has no local changes 2026-08-05 01:43:45,652 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:43:45,777 [ scc.git] DEBUG [detached HEAD 20a9374] merge master -Dorg -Ssuccess-only 2026-08-05 01:43:45,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:43:45,779 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:43:46,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-08-05 01:43:46,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-08-05 01:43:46,684 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:43:47,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:47,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:43:48,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:43:48,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:49,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:43:49,387 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:43:49,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-08-05 01:43:50,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-08-05 01:43:51,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:51,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:43:51,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:52,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:43:52,419 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-08-05 01:43:52,419 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:43:52,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-08-05 01:43:52,420 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:52,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:52,441 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:43:52,459 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:43:52,459 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:43:52,479 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:43:52,532 [ scc.git] DEBUG Already up to date. 2026-08-05 01:43:52,532 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-08-05 01:43:53,118 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-08-05 01:43:53,118 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-08-05 01:43:53,143 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-08-05 01:43:53,534 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-08-05 01:43:53,534 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-08-05 01:43:53,559 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:43:53,559 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:53,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:53,573 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-08-05 01:43:53,615 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:53,626 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-08-05 01:43:53,935 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-08-05 01:43:53,935 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-08-05 01:43:53,935 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-08-05 01:43:53,935 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-08-05 01:43:53,935 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-08-05 01:43:53,935 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-08-05 01:43:53,935 [ scc.git] DEBUG Auto-merging setup.py 2026-08-05 01:43:53,935 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-08-05 01:43:53,960 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-05 01:43:53,961 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-05 01:43:53,995 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-08-05 01:43:54,173 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-08-05 01:43:54,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:43:54,353 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-08-05 01:43:54,380 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-08-05 01:43:54,399 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#31](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/signup_settings.py - setup.py - omero_signup/views.py --conflicts 2026-08-05 01:43:54,409 [ scc.config] DEBUG Found github.token 2026-08-05 01:43:54,409 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-08-05 01:43:54,410 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-08-05 01:43:54,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:54,440 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-08-05 01:43:54,622 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:43:54,678 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-05 01:43:54,678 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-05 01:43:54,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:43:54,864 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:43:54,965 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:54,965 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:55,008 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:43:55,110 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:43:55,162 [ scc.git] DEBUG has no local changes 2026-08-05 01:43:55,162 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:43:55,298 [ scc.git] DEBUG [detached HEAD 12c65e0] merge master -Dorg -Ssuccess-only 2026-08-05 01:43:55,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:43:55,300 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:43:55,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-08-05 01:43:56,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-08-05 01:43:56,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-08-05 01:43:57,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-08-05 01:43:57,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:58,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:43:58,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-08-05 01:43:59,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:43:59,351 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-08-05 01:43:59,352 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:43:59,352 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-08-05 01:43:59,353 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:43:59,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:43:59,370 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:43:59,388 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:43:59,388 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:43:59,408 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:43:59,577 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-08-05 01:44:00,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-08-05 01:44:00,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-08-05 01:44:01,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-08-05 01:44:01,776 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-08-05 01:44:02,230 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-08-05 01:44:02,230 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-08-05 01:44:02,255 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:44:02,255 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:02,255 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:02,269 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-08-05 01:44:02,299 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:02,311 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-08-05 01:44:02,482 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-08-05 01:44:02,552 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:44:02,631 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-08-05 01:44:02,631 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-08-05 01:44:02,631 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-08-05 01:44:02,632 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-08-05 01:44:02,632 [ scc.git] DEBUG ms/test | 2 ++ 2026-08-05 01:44:02,632 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-08-05 01:44:02,632 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-08-05 01:44:02,632 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-08-05 01:44:02,632 [ scc.git] DEBUG create mode 100755 ms/test 2026-08-05 01:44:02,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:02,820 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:44:02,935 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:02,935 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:02,948 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:44:03,048 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:44:03,123 [ scc.git] DEBUG has no local changes 2026-08-05 01:44:03,123 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:44:03,253 [ scc.git] DEBUG [detached HEAD 001caf5] merge master -Dorg -Ssuccess-only 2026-08-05 01:44:03,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:44:03,255 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:44:03,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-08-05 01:44:04,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-08-05 01:44:04,101 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:44:04,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-08-05 01:44:05,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:44:05,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:44:06,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-08-05 01:44:06,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:44:06,780 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:44:06,780 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:44:06,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-08-05 01:44:06,782 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:06,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:06,804 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:44:06,830 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:44:06,830 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:44:06,849 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:44:06,898 [ scc.git] DEBUG Already up to date. 2026-08-05 01:44:06,898 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-08-05 01:44:07,305 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-08-05 01:44:07,305 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-08-05 01:44:07,326 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:44:07,326 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:07,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:07,345 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-08-05 01:44:07,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:07,381 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-08-05 01:44:07,606 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:44:07,669 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-05 01:44:07,669 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-05 01:44:07,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:07,871 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:44:07,997 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:07,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:08,011 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:44:08,113 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:44:08,178 [ scc.git] DEBUG has no local changes 2026-08-05 01:44:08,178 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:44:08,307 [ scc.git] DEBUG [detached HEAD dfab0d0] merge master -Dorg -Ssuccess-only 2026-08-05 01:44:08,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:44:08,308 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:44:08,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-08-05 01:44:09,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-08-05 01:44:09,305 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:44:09,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-08-05 01:44:10,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:44:10,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:44:11,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-08-05 01:44:12,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:44:12,005 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:44:12,005 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:44:12,005 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-08-05 01:44:12,006 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:12,007 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:12,028 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:44:12,059 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:44:12,059 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:44:12,083 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:44:12,253 [ scc.git] DEBUG Updating deab817..160d894 2026-08-05 01:44:13,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-08-05 01:44:13,050 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-08-05 01:44:13,455 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-08-05 01:44:13,456 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-08-05 01:44:13,479 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:44:13,479 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:13,479 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:13,494 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-08-05 01:44:13,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:13,526 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-08-05 01:44:13,736 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:44:13,794 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-05 01:44:13,794 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-05 01:44:13,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:13,978 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:44:14,103 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:14,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:14,115 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:44:14,208 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:44:14,255 [ scc.git] DEBUG has no local changes 2026-08-05 01:44:14,255 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:44:14,367 [ scc.git] DEBUG [detached HEAD a161913] merge master -Dorg -Ssuccess-only 2026-08-05 01:44:14,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:44:14,369 [ scc.git] INFO Overriding base-branch from master to main 2026-08-05 01:44:14,369 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:44:14,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-08-05 01:44:15,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-08-05 01:44:15,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-08-05 01:44:16,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-08-05 01:44:16,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:44:17,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:44:17,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-08-05 01:44:18,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:44:18,312 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-08-05 01:44:18,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-08-05 01:44:19,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-08-05 01:44:19,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-08-05 01:44:20,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-08-05 01:44:20,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:44:21,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-08-05 01:44:21,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:44:21,830 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-08-05 01:44:21,830 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:44:21,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-08-05 01:44:21,831 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:21,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:21,848 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-08-05 01:44:21,866 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:44:21,866 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-08-05 01:44:21,886 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-08-05 01:44:22,049 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-08-05 01:44:22,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-08-05 01:44:23,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-08-05 01:44:23,513 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-08-05 01:44:24,020 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-08-05 01:44:24,020 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-08-05 01:44:24,044 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-08-05 01:44:24,710 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-08-05 01:44:24,710 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-08-05 01:44:24,738 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:44:24,739 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:24,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:24,751 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-08-05 01:44:24,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:24,797 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-08-05 01:44:25,034 [ scc.git] DEBUG Auto-merging README.rst 2026-08-05 01:44:25,034 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-08-05 01:44:25,034 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-08-05 01:44:25,034 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-08-05 01:44:25,058 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-05 01:44:25,059 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-05 01:44:25,096 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-08-05 01:44:25,248 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-08-05 01:44:25,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:25,458 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-08-05 01:44:25,488 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-08-05 01:44:25,509 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#31](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-08-05 01:44:25,520 [ scc.config] DEBUG Found github.token 2026-08-05 01:44:25,520 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-08-05 01:44:25,520 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-08-05 01:44:25,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:25,579 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-08-05 01:44:25,801 [ scc.git] DEBUG Auto-merging README.rst 2026-08-05 01:44:25,802 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-08-05 01:44:25,866 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:44:25,940 [ scc.git] DEBUG README.rst | 3 + 2026-08-05 01:44:25,940 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-08-05 01:44:25,940 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-08-05 01:44:25,940 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-08-05 01:44:25,940 [ scc.git] DEBUG setup.py | 5 +- 2026-08-05 01:44:25,940 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-08-05 01:44:25,940 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-08-05 01:44:26,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:26,122 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:44:26,244 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:26,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:26,257 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:44:26,356 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:44:26,417 [ scc.git] DEBUG has no local changes 2026-08-05 01:44:26,417 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:44:26,548 [ scc.git] DEBUG [detached HEAD dca75a3] merge master -Dorg -Ssuccess-only 2026-08-05 01:44:26,550 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:44:26,550 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:44:26,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-08-05 01:44:27,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-08-05 01:44:27,386 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:44:28,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-08-05 01:44:28,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:44:29,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:44:29,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-08-05 01:44:30,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:44:30,048 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:44:30,048 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:44:30,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-08-05 01:44:30,049 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:30,049 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:30,067 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:44:30,086 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:44:30,086 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:44:30,108 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:44:30,161 [ scc.git] DEBUG Already up to date. 2026-08-05 01:44:30,161 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-08-05 01:44:30,548 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-08-05 01:44:30,548 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-08-05 01:44:30,571 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:44:30,571 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:30,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:30,585 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-08-05 01:44:30,607 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:30,618 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-08-05 01:44:30,773 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:44:30,825 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-05 01:44:30,825 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-05 01:44:31,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:31,009 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:44:31,120 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:31,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:31,135 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:44:31,237 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:44:31,288 [ scc.git] DEBUG has no local changes 2026-08-05 01:44:31,288 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:44:31,459 [ scc.git] DEBUG [detached HEAD d3dd77c] merge master -Dorg -Ssuccess-only 2026-08-05 01:44:31,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:44:31,462 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:44:31,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-08-05 01:44:32,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-08-05 01:44:32,287 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-05 01:44:32,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-08-05 01:44:33,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:44:33,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:44:34,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-08-05 01:44:34,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:44:34,983 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:44:34,983 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:44:34,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-08-05 01:44:34,984 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:34,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:35,004 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:44:35,024 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:44:35,024 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:44:35,046 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:44:35,135 [ scc.git] DEBUG Already up to date. 2026-08-05 01:44:35,136 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-08-05 01:44:35,538 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-08-05 01:44:35,538 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-08-05 01:44:35,563 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:44:35,563 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:35,563 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:35,579 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-08-05 01:44:35,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:35,618 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-08-05 01:44:35,831 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:44:35,903 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-05 01:44:35,903 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-05 01:44:36,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:36,101 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:44:36,205 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:36,205 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:36,217 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:44:36,328 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:44:36,395 [ scc.git] DEBUG has no local changes 2026-08-05 01:44:36,395 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:44:36,591 [ scc.git] DEBUG [detached HEAD 8f244e1] merge master -Dorg -Ssuccess-only 2026-08-05 01:44:36,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:44:36,594 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:44:36,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-08-05 01:44:36,821 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:44:36,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-08-05 01:44:36,822 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:36,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:36,840 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-05 01:44:36,861 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:44:36,861 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-05 01:44:36,882 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-05 01:44:36,943 [ scc.git] DEBUG Already up to date. 2026-08-05 01:44:36,943 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:44:36,943 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:36,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:36,959 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:44:37,063 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:37,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:37,074 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:44:37,177 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:44:37,293 [ scc.git] DEBUG has no local changes 2026-08-05 01:44:37,293 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:44:37,453 [ scc.git] DEBUG [detached HEAD 4e33909] merge master -Dorg -Ssuccess-only 2026-08-05 01:44:37,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:44:37,454 [ scc.git] INFO Overriding base-branch from master to develop 2026-08-05 01:44:37,454 [ scc.repo] DEBUG ## PRs found: 2026-08-05 01:44:37,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-08-05 01:44:38,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None 2026-08-05 01:44:38,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-08-05 01:44:39,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-05 01:44:39,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-05 01:44:40,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-08-05 01:44:40,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2 2026-08-05 01:44:40,762 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-08-05 01:44:40,762 [ scc.repo] DEBUG ## Branches found: 2026-08-05 01:44:40,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-08-05 01:44:40,763 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:40,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:40,786 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-08-05 01:44:40,808 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-05 01:44:40,808 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-08-05 01:44:40,860 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-08-05 01:44:41,217 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-08-05 01:44:41,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-08-05 01:44:42,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-08-05 01:44:43,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-08-05 01:44:43,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-08-05 01:44:44,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-08-05 01:44:45,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-08-05 01:44:46,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-08-05 01:44:46,414 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head' 2026-08-05 01:44:46,917 [ scc.git] DEBUG From https://github.com/ome/scripts 2026-08-05 01:44:46,917 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD 2026-08-05 01:44:46,944 [ scc.git] DEBUG ## Unique users: [] 2026-08-05 01:44:46,944 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:46,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:46,959 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f' 2026-08-05 01:44:46,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:47,007 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f' 2026-08-05 01:44:47,246 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-05 01:44:47,326 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++-- 2026-08-05 01:44:47,326 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2026-08-05 01:44:47,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:47,538 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-05 01:44:47,663 [ scc.git] DEBUG Get sha1 of %s 2026-08-05 01:44:47,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-05 01:44:47,677 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:44:47,785 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:44:47,857 [ scc.git] DEBUG has no local changes 2026-08-05 01:44:47,857 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:44:48,061 [ scc.git] DEBUG [detached HEAD fcee3f0] merge master -Dorg -Ssuccess-only 2026-08-05 01:44:48,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:44:48,062 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-05 01:44:48,254 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-08-05 01:44:48,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:48,474 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-08-05 01:44:48,482 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-08-05 01:44:48,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:48,903 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-08-05 01:44:48,910 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-08-05 01:44:49,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:49,334 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-08-05 01:44:49,343 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-08-05 01:44:49,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:49,785 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-08-05 01:44:50,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:50,216 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-08-05 01:44:50,223 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-08-05 01:44:50,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:50,658 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-08-05 01:44:50,664 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-08-05 01:44:51,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:51,120 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-08-05 01:44:51,129 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-08-05 01:44:51,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:51,552 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-08-05 01:44:51,559 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-08-05 01:44:51,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:51,984 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-08-05 01:44:51,992 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-08-05 01:44:52,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:52,437 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-08-05 01:44:52,446 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-08-05 01:44:52,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:52,901 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-08-05 01:44:52,910 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-08-05 01:44:53,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:53,328 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-08-05 01:44:53,336 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-08-05 01:44:53,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:53,767 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-08-05 01:44:54,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:54,233 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-08-05 01:44:54,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:54,664 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-08-05 01:44:54,673 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-08-05 01:44:55,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:55,114 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-08-05 01:44:55,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:55,558 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-08-05 01:44:55,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:55,994 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-08-05 01:44:56,001 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-08-05 01:44:56,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:56,441 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-08-05 01:44:56,449 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-08-05 01:44:56,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:56,867 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-08-05 01:44:56,875 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-08-05 01:44:57,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:57,321 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-08-05 01:44:57,328 [ scc.config] DEBUG Found submodule.scripts.url 2026-08-05 01:44:57,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-05 01:44:57,754 [ scc.config] DEBUG Found submodule.scripts.branch 2026-08-05 01:44:57,754 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-05 01:44:59,647 [ scc.git] DEBUG has local changes 2026-08-05 01:44:59,648 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' - PR 196 will-moore 'Storage options only if needed' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Updating 9cc36cde..18887279 Previously merged: - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 692 will-moore 'colorbar lut background fix' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..177e4b5e Previously merged: - PR 541 will-moore 'Only add channel to tile request string if active' - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 546 will-moore 'Use POST data for saveImgRdef params' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#31 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/31/)' 2026-08-05 01:45:00,294 [ scc.git] DEBUG [detached HEAD 16990d5] merge master -Dorg -Ssuccess-only 2026-08-05 01:45:00,294 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-08-05 01:45:00,295 [ scc.merge] INFO Repository: ome/omero-plugins 2026-08-05 01:45:00,295 [ scc.merge] INFO Already up to date. 2026-08-05 01:45:00,295 [ scc.merge] INFO 2026-08-05 01:45:00,295 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,295 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-05 01:45:00,295 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-05 01:45:00,295 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-05 01:45:00,295 [ scc.merge] INFO 2026-08-05 01:45:00,295 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-08-05 01:45:00,295 [ scc.merge] INFO Already up to date. 2026-08-05 01:45:00,295 [ scc.merge] INFO 2026-08-05 01:45:00,296 [ scc.merge] INFO 2026-08-05 01:45:00,296 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-08-05 01:45:00,296 [ scc.merge] INFO Excluded PRs: 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-08-05 01:45:00,296 [ scc.merge] INFO Already up to date. 2026-08-05 01:45:00,296 [ scc.merge] INFO 2026-08-05 01:45:00,296 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:45:00,296 [ scc.merge] INFO 2026-08-05 01:45:00,296 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-08-05 01:45:00,296 [ scc.merge] INFO Excluded PRs: 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-08-05 01:45:00,296 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-08-05 01:45:00,296 [ scc.merge] INFO Previously merged: 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-08-05 01:45:00,296 [ scc.merge] INFO 2026-08-05 01:45:00,296 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-08-05 01:45:00,296 [ scc.merge] INFO 2026-08-05 01:45:00,296 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-08-05 01:45:00,296 [ scc.merge] INFO Excluded PRs: 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-08-05 01:45:00,296 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-08-05 01:45:00,296 [ scc.merge] INFO Previously merged: 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-05 01:45:00,296 [ scc.merge] INFO 2026-08-05 01:45:00,296 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-08-05 01:45:00,296 [ scc.merge] INFO - PR 196 will-moore 'Storage options only if needed' 2026-08-05 01:45:00,297 [ scc.merge] INFO 2026-08-05 01:45:00,297 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-08-05 01:45:00,297 [ scc.merge] INFO 2026-08-05 01:45:00,297 [ scc.merge] INFO Repository: ome/omero-figure 2026-08-05 01:45:00,297 [ scc.merge] INFO Updating 9cc36cde..18887279 2026-08-05 01:45:00,297 [ scc.merge] INFO Previously merged: 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 691 dependabot[bot] 'Bump esbuild and vite' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 685 will-moore 'Fix static files links for release build' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 683 will-moore 'Add touch support for clicking on single panel' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 680 will-moore 'Use --pre install for export script in README' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 676 dependabot[bot] 'Bump picomatch' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-08-05 01:45:00,297 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-05 01:45:00,298 [ scc.merge] INFO 2026-08-05 01:45:00,298 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 692 will-moore 'colorbar lut background fix' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 696 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.12' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' 2026-08-05 01:45:00,298 [ scc.merge] INFO 2026-08-05 01:45:00,298 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-08-05 01:45:00,298 [ scc.merge] INFO Already up to date. 2026-08-05 01:45:00,298 [ scc.merge] INFO 2026-08-05 01:45:00,298 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:45:00,298 [ scc.merge] INFO 2026-08-05 01:45:00,298 [ scc.merge] INFO Repository: ome/omero-gallery 2026-08-05 01:45:00,298 [ scc.merge] INFO Already up to date. 2026-08-05 01:45:00,298 [ scc.merge] INFO 2026-08-05 01:45:00,298 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-08-05 01:45:00,298 [ scc.merge] INFO 2026-08-05 01:45:00,298 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-08-05 01:45:00,298 [ scc.merge] INFO 2026-08-05 01:45:00,298 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-08-05 01:45:00,298 [ scc.merge] INFO Excluded PRs: 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-08-05 01:45:00,298 [ scc.merge] INFO Updating 7a798cee..177e4b5e 2026-08-05 01:45:00,298 [ scc.merge] INFO Previously merged: 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 541 will-moore 'Only add channel to tile request string if active' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' 2026-08-05 01:45:00,298 [ scc.merge] INFO - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 535 dependabot[bot] 'Bump tmp and eslint' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 529 will-moore 'Image id and roi id initial params' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 517 will-moore 'Fix roi link permissions' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-05 01:45:00,299 [ scc.merge] INFO 2026-08-05 01:45:00,299 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 546 will-moore 'Use POST data for saveImgRdef params' 2026-08-05 01:45:00,299 [ scc.merge] INFO 2026-08-05 01:45:00,299 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 532 will-moore 'Zarr layers' 2026-08-05 01:45:00,299 [ scc.merge] INFO 2026-08-05 01:45:00,299 [ scc.merge] INFO Repository: ome/omero-mapr 2026-08-05 01:45:00,299 [ scc.merge] INFO Excluded PRs: 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-08-05 01:45:00,299 [ scc.merge] INFO Already up to date. 2026-08-05 01:45:00,299 [ scc.merge] INFO 2026-08-05 01:45:00,299 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-08-05 01:45:00,299 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-05 01:45:00,299 [ scc.merge] INFO 2026-08-05 01:45:00,299 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:45:00,300 [ scc.merge] INFO 2026-08-05 01:45:00,300 [ scc.merge] INFO Repository: ome/omero-metadata 2026-08-05 01:45:00,300 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-08-05 01:45:00,300 [ scc.merge] INFO Previously merged: 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-05 01:45:00,300 [ scc.merge] INFO 2026-08-05 01:45:00,300 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-08-05 01:45:00,300 [ scc.merge] INFO 2026-08-05 01:45:00,300 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-08-05 01:45:00,300 [ scc.merge] INFO 2026-08-05 01:45:00,300 [ scc.merge] INFO Repository: ome/omero-parade 2026-08-05 01:45:00,300 [ scc.merge] INFO Excluded PRs: 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-08-05 01:45:00,300 [ scc.merge] INFO Already up to date. 2026-08-05 01:45:00,300 [ scc.merge] INFO 2026-08-05 01:45:00,300 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-05 01:45:00,300 [ scc.merge] INFO 2026-08-05 01:45:00,300 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-08-05 01:45:00,300 [ scc.merge] INFO Already up to date. 2026-08-05 01:45:00,300 [ scc.merge] INFO 2026-08-05 01:45:00,300 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:45:00,300 [ scc.merge] INFO 2026-08-05 01:45:00,300 [ scc.merge] INFO Repository: ome/omero-rois 2026-08-05 01:45:00,300 [ scc.merge] INFO Excluded PRs: 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-08-05 01:45:00,300 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-08-05 01:45:00,300 [ scc.merge] INFO Previously merged: 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-08-05 01:45:00,300 [ scc.merge] INFO 2026-08-05 01:45:00,300 [ scc.merge] INFO 2026-08-05 01:45:00,300 [ scc.merge] INFO Repository: ome/omero-signup 2026-08-05 01:45:00,300 [ scc.merge] INFO Already up to date. 2026-08-05 01:45:00,300 [ scc.merge] INFO 2026-08-05 01:45:00,300 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:45:00,300 [ scc.merge] INFO 2026-08-05 01:45:00,300 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-05 01:45:00,300 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-08-05 01:45:00,301 [ scc.merge] INFO 2026-08-05 01:45:00,301 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-08-05 01:45:00,301 [ scc.merge] INFO Excluded PRs: 2026-08-05 01:45:00,301 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-08-05 01:45:00,301 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-08-05 01:45:00,301 [ scc.merge] INFO Previously merged: 2026-08-05 01:45:00,301 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-08-05 01:45:00,301 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-08-05 01:45:00,301 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-08-05 01:45:00,301 [ scc.merge] INFO 2026-08-05 01:45:00,301 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,301 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-08-05 01:45:00,301 [ scc.merge] INFO 2026-08-05 01:45:00,301 [ scc.merge] INFO Repository: ome/omero-upload 2026-08-05 01:45:00,301 [ scc.merge] INFO Already up to date. 2026-08-05 01:45:00,301 [ scc.merge] INFO 2026-08-05 01:45:00,301 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,301 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:45:00,301 [ scc.merge] INFO 2026-08-05 01:45:00,301 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-08-05 01:45:00,301 [ scc.merge] INFO Updating deab817..160d894 2026-08-05 01:45:00,301 [ scc.merge] INFO Previously merged: 2026-08-05 01:45:00,301 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-08-05 01:45:00,301 [ scc.merge] INFO 2026-08-05 01:45:00,301 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,301 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:45:00,301 [ scc.merge] INFO 2026-08-05 01:45:00,301 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-08-05 01:45:00,301 [ scc.merge] INFO Excluded PRs: 2026-08-05 01:45:00,301 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-08-05 01:45:00,301 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-08-05 01:45:00,301 [ scc.merge] INFO Previously merged: 2026-08-05 01:45:00,301 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-08-05 01:45:00,301 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-08-05 01:45:00,301 [ scc.merge] INFO 2026-08-05 01:45:00,301 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,301 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-08-05 01:45:00,301 [ scc.merge] INFO 2026-08-05 01:45:00,301 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-05 01:45:00,301 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-08-05 01:45:00,301 [ scc.merge] INFO 2026-08-05 01:45:00,301 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-08-05 01:45:00,301 [ scc.merge] INFO Already up to date. 2026-08-05 01:45:00,301 [ scc.merge] INFO 2026-08-05 01:45:00,301 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,301 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:45:00,301 [ scc.merge] INFO 2026-08-05 01:45:00,301 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-08-05 01:45:00,301 [ scc.merge] INFO Already up to date. 2026-08-05 01:45:00,302 [ scc.merge] INFO 2026-08-05 01:45:00,302 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,302 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-05 01:45:00,302 [ scc.merge] INFO 2026-08-05 01:45:00,302 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-08-05 01:45:00,302 [ scc.merge] INFO Already up to date. 2026-08-05 01:45:00,302 [ scc.merge] INFO 2026-08-05 01:45:00,302 [ scc.merge] INFO 2026-08-05 01:45:00,302 [ scc.merge] INFO Repository: ome/scripts 2026-08-05 01:45:00,302 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-08-05 01:45:00,302 [ scc.merge] INFO Previously merged: 2026-08-05 01:45:00,302 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-08-05 01:45:00,302 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-08-05 01:45:00,302 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-08-05 01:45:00,302 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-08-05 01:45:00,302 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-08-05 01:45:00,302 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-08-05 01:45:00,302 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-08-05 01:45:00,302 [ scc.merge] INFO 2026-08-05 01:45:00,302 [ scc.merge] INFO Merged PRs: 2026-08-05 01:45:00,302 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-08-05 01:45:00,302 [ scc.merge] INFO 2026-08-05 01:45:00,302 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-08-05 01:45:00,302 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-08-05 01:45:00,316 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-08-05 01:45:00,331 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-08-05 01:45:00,356 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-08-05 01:45:00,370 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,382 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,382 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-08-05 01:45:00,382 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-08-05 01:45:00,396 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-08-05 01:45:00,408 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,422 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,422 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-08-05 01:45:00,423 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-08-05 01:45:00,437 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,452 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,452 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-08-05 01:45:00,452 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,467 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,467 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-08-05 01:45:00,467 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-08-05 01:45:00,482 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-08-05 01:45:00,496 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-08-05 01:45:00,510 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-08-05 01:45:00,525 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-08-05 01:45:00,540 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-08-05 01:45:00,553 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-08-05 01:45:00,567 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-08-05 01:45:00,580 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-08-05 01:45:00,592 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-08-05 01:45:00,604 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-05 01:45:00,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-08-05 01:45:00,618 [ scc.git] DEBUG Calling 'git remote' 2026-08-05 01:45:00,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.11.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 36269f9] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798cee nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 5f0a16f] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-08-05 01:46:09,823 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-08-05 01:46:19,808 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-08-05 01:46:22,412 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-05 01:46:27,485 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-05 01:47:18,106 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS