Started by upstream project "Trigger" build number 39 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 6e8d6c02735d91d63282abf7000916273d6c54c1 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 6e8d6c02735d91d63282abf7000916273d6c54c1 # timeout=10 Commit message: "Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147" > git rev-list --no-walk 0f0fc56a61fb33d243b6c42580a3c7392b2fab94 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 [Pipeline] pwd > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 35 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.11.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.31.0-py3-none-any.whl (62 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.11.0-py3-none-any.whl (34 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl (4.6 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.5 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.11.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-04-15 11:28:29,640 [ scc.config] DEBUG Found github.token 2024-04-15 11:28:29,643 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-04-15 11:28:29,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:28:30,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:28:30,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-04-15 11:28:30,743 [ scc.gh] DEBUG 3964 remaining from 5000 (Reset at 11:04 2024-04-15 11:28:30,744 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:28:30,853 [ scc.git] DEBUG Check current status 2024-04-15 11:28:30,854 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:28:30,863 [ scc.git] DEBUG 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-04-15 11:28:30,863 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:28:30,940 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-15 11:28:30,943 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-15 11:28:30,945 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-15 11:28:30,948 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-15 11:28:30,977 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-15 11:28:30,980 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-15 11:28:30,983 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-15 11:28:31,061 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-15 11:28:31,065 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-15 11:28:31,068 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-15 11:28:31,072 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-15 11:28:31,075 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-15 11:28:31,079 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-15 11:28:31,082 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-15 11:28:31,086 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-15 11:28:31,088 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-15 11:28:31,091 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-15 11:28:31,094 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-15 11:28:31,096 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-15 11:28:31,099 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-15 11:28:31,101 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-15 11:28:31,105 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-15 11:28:31,110 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:28:31,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-04-15 11:28:31,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:28:32,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:28:32,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:28:33,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:28:33,084 [ scc.git] DEBUG Resetting... 2024-04-15 11:28:33,084 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-04-15 11:28:33,112 [ scc.git] DEBUG HEAD is now at 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-04-15 11:28:33,113 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-04-15 11:28:33,219 [ scc.git] DEBUG Check current status 2024-04-15 11:28:33,219 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:28:33,224 [ scc.git] DEBUG 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-04-15 11:28:33,224 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:28:33,272 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-15 11:28:33,275 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-15 11:28:33,278 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-15 11:28:33,281 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-15 11:28:33,285 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-15 11:28:33,287 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-15 11:28:33,290 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-15 11:28:33,293 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-15 11:28:33,296 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-15 11:28:33,299 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-15 11:28:33,302 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-15 11:28:33,305 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-15 11:28:33,308 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-15 11:28:33,311 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-15 11:28:33,314 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-15 11:28:33,317 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-15 11:28:33,319 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-15 11:28:33,322 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-15 11:28:33,325 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-15 11:28:33,328 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-15 11:28:33,331 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-15 11:28:33,334 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-15 11:28:33,335 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-04-15 11:28:33,335 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-04-15 11:28:33,335 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-04-15 11:28:33,335 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-04-15 11:28:33,335 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-04-15 11:28:33,335 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:28:33,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-04-15 11:28:33,523 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:28:33,523 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:28:33,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:28:33,527 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:28:33,531 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:28:33,531 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:28:33,536 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:28:33,565 [ scc.git] DEBUG Already up to date. 2024-04-15 11:28:33,565 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:28:33,565 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:28:33,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:28:33,569 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:28:33,627 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:28:33,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:28:33,632 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:28:34,134 [ scc.git] DEBUG has no local changes 2024-04-15 11:28:34,134 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:28:34,212 [ scc.git] DEBUG [detached HEAD caba669] merge master -Dorg -Snone 2024-04-15 11:28:34,212 [ scc.merge] INFO Repository: ome/omero-plugins 2024-04-15 11:28:34,212 [ scc.merge] INFO Already up to date. 2024-04-15 11:28:34,212 [ scc.merge] INFO 2024-04-15 11:28:34,213 [ scc.merge] INFO 2024-04-15 11:28:34,213 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-04-15 11:28:34,213 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-04-15 11:28:43,349 [ scc.config] DEBUG Found github.token 2024-04-15 11:28:43,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-04-15 11:28:43,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:28:43,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:28:44,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-04-15 11:28:44,419 [ scc.gh] DEBUG 3956 remaining from 5000 (Reset at 11:04 2024-04-15 11:28:44,419 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:28:44,441 [ scc.git] DEBUG Check current status 2024-04-15 11:28:44,441 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:28:44,445 [ scc.git] DEBUG caba669 merge master -Dorg -Snone 2024-04-15 11:28:44,445 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:28:44,493 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-15 11:28:44,496 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-15 11:28:44,498 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-15 11:28:44,501 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-15 11:28:44,505 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-15 11:28:44,507 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-15 11:28:44,510 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-15 11:28:44,513 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-15 11:28:44,516 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-15 11:28:44,519 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-15 11:28:44,522 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-15 11:28:44,524 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-15 11:28:44,527 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-15 11:28:44,530 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-15 11:28:44,533 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-15 11:28:44,535 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-15 11:28:44,538 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-15 11:28:44,540 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-15 11:28:44,543 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-15 11:28:44,545 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-15 11:28:44,548 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-15 11:28:44,551 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-15 11:28:44,555 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:28:44,556 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-04-15 11:28:44,557 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-04-15 11:28:44,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-04-15 11:28:45,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:28:45,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:28:46,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:28:46,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:28:46,609 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:28:46,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-15 11:28:46,713 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:28:46,717 [ scc.git] DEBUG Check current status 2024-04-15 11:28:46,717 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:28:46,721 [ scc.git] DEBUG c9c839c Merge pull request #64 from jburel/gateway_5_8_2 2024-04-15 11:28:46,721 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:28:46,766 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:28:47,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-04-15 11:28:47,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:28:48,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:28:48,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:28:48,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:28:48,835 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:28:48,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:28:48,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-15 11:28:48,894 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:28:48,898 [ scc.git] DEBUG Check current status 2024-04-15 11:28:48,898 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:28:48,902 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-04-15 11:28:48,903 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:28:48,944 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:28:49,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-04-15 11:28:49,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:28:50,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:28:50,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:28:51,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:28:51,078 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:28:51,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:28:51,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-15 11:28:51,138 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:28:51,142 [ scc.git] DEBUG Check current status 2024-04-15 11:28:51,142 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:28:51,146 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-04-15 11:28:51,147 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:28:51,191 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:28:51,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-04-15 11:28:52,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:28:52,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:28:52,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:28:53,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:28:53,345 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:28:53,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:28:53,387 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-15 11:28:53,387 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:28:53,391 [ scc.git] DEBUG Check current status 2024-04-15 11:28:53,392 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:28:53,396 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-15 11:28:53,396 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:28:53,437 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:28:53,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-04-15 11:28:54,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:28:54,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:28:55,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:28:55,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:28:55,572 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:28:55,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:28:55,642 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-15 11:28:55,643 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:28:55,647 [ scc.git] DEBUG Check current status 2024-04-15 11:28:55,648 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:28:55,673 [ scc.git] DEBUG ded0caab Merge pull request #548 from will-moore/fix_label_cropping_in_tiff_export 2024-04-15 11:28:55,673 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:28:55,721 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:28:56,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-04-15 11:28:56,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:28:56,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:28:57,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:28:57,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:28:57,773 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:28:57,860 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:28:57,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-15 11:28:57,861 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:28:57,865 [ scc.git] DEBUG Check current status 2024-04-15 11:28:57,865 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:28:57,885 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-04-15 11:28:57,885 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:28:57,926 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:28:58,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-04-15 11:28:58,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:28:59,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:28:59,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:28:59,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:28:59,936 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:28:59,976 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:28:59,977 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-15 11:28:59,977 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:28:59,983 [ scc.git] DEBUG Check current status 2024-04-15 11:28:59,983 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:28:59,987 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-04-15 11:28:59,987 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:00,031 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:29:00,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-04-15 11:29:00,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:29:01,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:29:01,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:02,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:29:02,171 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:02,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:02,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-15 11:29:02,212 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:29:02,217 [ scc.git] DEBUG Check current status 2024-04-15 11:29:02,217 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:29:02,221 [ scc.git] DEBUG 9d8d147 Merge pull request #468 from ome/dependabot/npm_and_yarn/express-4.19.2 2024-04-15 11:29:02,221 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:02,263 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:29:02,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-04-15 11:29:03,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:29:03,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:29:03,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:04,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:29:04,385 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:04,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:04,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-15 11:29:04,482 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:29:04,487 [ scc.git] DEBUG Check current status 2024-04-15 11:29:04,487 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:29:04,506 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-04-15 11:29:04,506 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:04,550 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:29:04,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-04-15 11:29:05,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:29:05,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:29:06,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:06,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:29:06,572 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:06,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:06,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-15 11:29:06,613 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:29:06,617 [ scc.git] DEBUG Check current status 2024-04-15 11:29:06,618 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:29:06,621 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-15 11:29:06,622 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:06,664 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:29:07,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-04-15 11:29:07,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:29:07,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:29:08,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:08,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:29:08,767 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:08,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:08,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-15 11:29:08,808 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:29:08,812 [ scc.git] DEBUG Check current status 2024-04-15 11:29:08,813 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:29:08,816 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-04-15 11:29:08,817 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:08,858 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:29:09,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-04-15 11:29:09,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:29:10,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:29:10,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:11,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:29:11,035 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:11,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:11,077 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-15 11:29:11,077 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:29:11,082 [ scc.git] DEBUG Check current status 2024-04-15 11:29:11,082 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:29:11,086 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-04-15 11:29:11,086 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:11,128 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:29:11,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-04-15 11:29:11,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:29:12,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:29:12,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:13,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:29:13,227 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:13,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:13,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-15 11:29:13,270 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:29:13,274 [ scc.git] DEBUG Check current status 2024-04-15 11:29:13,275 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:29:13,278 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-04-15 11:29:13,279 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:13,320 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:29:13,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-04-15 11:29:14,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:29:14,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:29:15,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:15,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:29:15,427 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:15,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:15,467 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-15 11:29:15,467 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:29:15,472 [ scc.git] DEBUG Check current status 2024-04-15 11:29:15,472 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:29:15,477 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-04-15 11:29:15,477 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:15,523 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:29:15,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-04-15 11:29:16,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:29:16,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:29:17,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:17,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:29:17,614 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:17,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:17,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-15 11:29:17,656 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:29:17,661 [ scc.git] DEBUG Check current status 2024-04-15 11:29:17,661 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:29:17,666 [ scc.git] DEBUG a0148a6 Merge pull request #68 from sbesson/pytest 2024-04-15 11:29:17,666 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:17,714 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:29:18,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-15 11:29:18,036 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-15 11:29:18,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-04-15 11:29:18,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:29:19,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:29:19,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:20,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:29:20,058 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:20,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:20,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-15 11:29:20,098 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:29:20,103 [ scc.git] DEBUG Check current status 2024-04-15 11:29:20,103 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:29:20,107 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-04-15 11:29:20,108 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:20,152 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:29:20,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-04-15 11:29:21,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:29:21,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:29:21,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:22,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:29:22,247 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:22,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:22,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-15 11:29:22,287 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:29:22,291 [ scc.git] DEBUG Check current status 2024-04-15 11:29:22,291 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:29:22,295 [ scc.git] DEBUG deab817 update setup-python to v4 2024-04-15 11:29:22,295 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:22,336 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:29:22,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-04-15 11:29:23,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:29:23,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:29:24,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:24,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:29:24,526 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:24,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:24,568 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-15 11:29:24,568 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:29:24,573 [ scc.git] DEBUG Check current status 2024-04-15 11:29:24,573 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:29:24,577 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-04-15 11:29:24,577 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:24,627 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:29:24,628 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-04-15 11:29:25,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-04-15 11:29:25,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:29:26,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:29:26,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:26,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:29:26,872 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:26,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:26,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-15 11:29:26,913 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:29:26,919 [ scc.git] DEBUG Check current status 2024-04-15 11:29:26,919 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:29:26,924 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-04-15 11:29:26,924 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:26,969 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:29:27,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-15 11:29:27,297 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-15 11:29:27,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-04-15 11:29:27,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:29:28,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:29:28,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:29,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:29:29,204 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:29,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:29,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-15 11:29:29,250 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:29:29,255 [ scc.git] DEBUG Check current status 2024-04-15 11:29:29,255 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:29:29,259 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-04-15 11:29:29,260 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:29,301 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:29:29,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-15 11:29:29,635 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-15 11:29:29,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-04-15 11:29:30,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:29:30,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:29:31,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:31,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:29:31,568 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:31,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:31,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-15 11:29:31,609 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:29:31,615 [ scc.git] DEBUG Check current status 2024-04-15 11:29:31,616 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:29:31,621 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-04-15 11:29:31,621 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:31,665 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:29:32,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-04-15 11:29:32,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:29:32,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:29:33,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:33,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:29:33,791 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:33,832 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:33,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-15 11:29:33,833 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-15 11:29:33,839 [ scc.git] DEBUG Check current status 2024-04-15 11:29:33,839 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:29:33,844 [ scc.git] DEBUG 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-04-15 11:29:33,844 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:33,886 [ scc.config] DEBUG Found remote.origin.url 2024-04-15 11:29:33,887 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-04-15 11:29:34,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-15 11:29:34,208 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-15 11:29:34,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-04-15 11:29:34,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-15 11:29:35,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-15 11:29:35,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:36,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-15 11:29:36,196 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:36,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:36,239 [ scc.git] DEBUG Resetting... 2024-04-15 11:29:36,239 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-04-15 11:29:36,273 [ scc.git] DEBUG HEAD is now at caba669 merge master -Dorg -Snone 2024-04-15 11:29:36,273 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-04-15 11:29:36,373 [ scc.git] DEBUG Check current status 2024-04-15 11:29:36,373 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-15 11:29:36,380 [ scc.git] DEBUG caba669 merge master -Dorg -Snone 2024-04-15 11:29:36,380 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-15 11:29:36,464 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-15 11:29:36,467 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-15 11:29:36,470 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-15 11:29:36,472 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-15 11:29:36,475 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-15 11:29:36,478 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-15 11:29:36,481 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-15 11:29:36,484 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-15 11:29:36,487 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-15 11:29:36,489 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-15 11:29:36,492 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-15 11:29:36,494 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-15 11:29:36,497 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-15 11:29:36,500 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-15 11:29:36,503 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-15 11:29:36,506 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-15 11:29:36,508 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-15 11:29:36,510 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-15 11:29:36,513 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-15 11:29:36,515 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-15 11:29:36,518 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-15 11:29:36,521 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-15 11:29:36,522 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-04-15 11:29:36,522 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-04-15 11:29:36,522 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-04-15 11:29:36,522 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-04-15 11:29:36,522 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-04-15 11:29:36,522 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-04-15 11:29:36,522 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:29:36,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-04-15 11:29:36,691 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:29:36,691 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:29:36,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:29:36,698 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:29:36,707 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:29:36,708 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:29:36,716 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:29:36,721 [ scc.git] DEBUG Already up to date. 2024-04-15 11:29:36,721 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:29:36,722 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:29:36,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:29:36,726 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:29:36,779 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:29:36,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:29:36,785 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:29:37,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-04-15 11:29:37,127 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:29:37,128 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-15 11:29:37,128 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:29:37,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:29:37,133 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:29:37,138 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:29:37,138 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:29:37,143 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:29:37,148 [ scc.git] DEBUG Already up to date. 2024-04-15 11:29:37,149 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:29:37,149 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:29:37,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:29:37,154 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:29:37,193 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:29:37,193 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:29:37,198 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:37,238 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:29:37,244 [ scc.git] DEBUG has no local changes 2024-04-15 11:29:37,244 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:29:37,275 [ scc.git] DEBUG [detached HEAD 201354f] merge master -Dorg -Ssuccess-only 2024-04-15 11:29:37,276 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:37,276 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:29:37,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-04-15 11:29:38,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-04-15 11:29:38,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-04-15 11:29:39,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-04-15 11:29:39,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:29:40,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-15 11:29:40,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-04-15 11:29:41,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:29:41,105 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-04-15 11:29:41,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-04-15 11:29:42,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-04-15 11:29:42,089 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:29:42,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-15 11:29:42,090 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:29:42,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:29:42,095 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:29:42,100 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:29:42,100 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:29:42,105 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:29:42,110 [ scc.git] DEBUG Already up to date. 2024-04-15 11:29:42,110 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-04-15 11:29:42,692 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-04-15 11:29:42,693 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-04-15 11:29:42,712 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:29:42,712 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:29:42,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:29:42,718 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-04-15 11:29:42,723 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:29:42,728 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-04-15 11:29:42,744 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:29:42,747 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-04-15 11:29:42,747 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-04-15 11:29:42,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:29:42,908 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:29:42,953 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:29:42,953 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:29:42,959 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:43,002 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:29:43,010 [ scc.git] DEBUG has no local changes 2024-04-15 11:29:43,010 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:29:43,019 [ scc.git] DEBUG [detached HEAD b80871d] merge master -Dorg -Ssuccess-only 2024-04-15 11:29:43,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:43,020 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:29:43,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-04-15 11:29:43,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-04-15 11:29:44,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-04-15 11:29:44,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-04-15 11:29:45,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-04-15 11:29:45,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-04-15 11:29:46,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:29:46,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-04-15 11:29:47,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:29:47,151 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-04-15 11:29:47,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-04-15 11:29:48,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-04-15 11:29:48,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-04-15 11:29:48,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-04-15 11:29:49,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-04-15 11:29:49,439 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:29:49,439 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-15 11:29:49,439 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:29:49,439 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:29:49,445 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:29:49,450 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:29:49,450 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:29:49,455 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:29:49,460 [ scc.git] DEBUG Already up to date. 2024-04-15 11:29:49,460 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-04-15 11:29:49,944 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-04-15 11:29:49,945 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-04-15 11:29:49,950 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:29:49,950 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:29:49,950 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:29:49,956 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-04-15 11:29:49,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:29:49,967 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-04-15 11:29:49,976 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:29:49,978 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-04-15 11:29:49,978 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-04-15 11:29:50,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:29:50,141 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:29:50,181 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:29:50,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:29:50,187 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:29:50,227 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:29:50,233 [ scc.git] DEBUG has no local changes 2024-04-15 11:29:50,233 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:29:50,242 [ scc.git] DEBUG [detached HEAD 0de0f3c] merge master -Dorg -Ssuccess-only 2024-04-15 11:29:50,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:29:50,242 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:29:50,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-04-15 11:29:51,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-04-15 11:29:51,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-04-15 11:29:52,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-04-15 11:29:52,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-15 11:29:53,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:29:53,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-15 11:29:54,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-15 11:29:54,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-04-15 11:29:55,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-15 11:29:55,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-04-15 11:29:55,481 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-04-15 11:29:55,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-04-15 11:29:56,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-04-15 11:29:56,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-04-15 11:29:57,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-04-15 11:29:57,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:29:58,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-04-15 11:29:58,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:29:58,819 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-04-15 11:29:59,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-04-15 11:29:59,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-04-15 11:30:00,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-04-15 11:30:00,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-04-15 11:30:01,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:30:01,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-04-15 11:30:02,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:30:02,115 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-04-15 11:30:02,115 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:30:02,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-15 11:30:02,116 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:02,116 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:02,123 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:30:02,128 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:30:02,128 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:30:02,134 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:30:02,139 [ scc.git] DEBUG Already up to date. 2024-04-15 11:30:02,139 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-04-15 11:30:02,582 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-15 11:30:02,582 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-04-15 11:30:02,587 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-04-15 11:30:03,057 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-15 11:30:03,057 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-04-15 11:30:03,063 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-04-15 11:30:03,498 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-15 11:30:03,498 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-04-15 11:30:03,503 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:30:03,503 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:03,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:03,510 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-15 11:30:03,518 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:03,523 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-15 11:30:03,578 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-04-15 11:30:03,578 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-15 11:30:03,578 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-04-15 11:30:03,579 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-15 11:30:03,579 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-15 11:30:03,587 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-15 11:30:03,594 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-15 11:30:03,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:30:03,764 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-15 11:30:03,773 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-15 11:30:03,779 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#33](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-04-15 11:30:03,784 [ scc.config] DEBUG Found github.token 2024-04-15 11:30:03,784 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-04-15 11:30:03,784 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-15 11:30:03,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:03,798 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-15 11:30:03,842 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-04-15 11:30:03,842 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-04-15 11:30:03,842 [ scc.git] DEBUG Auto-merging setup.py 2024-04-15 11:30:03,842 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-04-15 11:30:03,842 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-15 11:30:03,842 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-04-15 11:30:03,842 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-04-15 11:30:03,842 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-15 11:30:03,843 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-15 11:30:03,849 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-15 11:30:03,855 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-15 11:30:04,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:30:04,180 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-15 11:30:04,189 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-15 11:30:04,196 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#33](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-04-15 11:30:04,203 [ scc.config] DEBUG Found github.token 2024-04-15 11:30:04,203 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-04-15 11:30:04,203 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-04-15 11:30:04,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:04,217 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-04-15 11:30:04,230 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-04-15 11:30:04,230 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-15 11:30:04,230 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:30:04,234 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-04-15 11:30:04,234 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-04-15 11:30:04,234 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-04-15 11:30:04,234 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-04-15 11:30:04,234 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-04-15 11:30:04,234 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-04-15 11:30:04,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:30:04,582 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:30:04,622 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:04,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:04,628 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:30:04,669 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:30:04,675 [ scc.git] DEBUG has no local changes 2024-04-15 11:30:04,675 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:30:04,683 [ scc.git] DEBUG [detached HEAD b8fd44e] merge master -Dorg -Ssuccess-only 2024-04-15 11:30:04,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:30:04,683 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:30:05,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-04-15 11:30:05,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-04-15 11:30:06,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543 HTTP/1.1" 200 None 2024-04-15 11:30:06,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543/comments HTTP/1.1" 200 None 2024-04-15 11:30:06,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/477 HTTP/1.1" 200 None 2024-04-15 11:30:07,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/477/comments HTTP/1.1" 200 None 2024-04-15 11:30:08,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29 HTTP/1.1" 200 None 2024-04-15 11:30:08,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:30:08,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-15 11:30:09,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29 HTTP/1.1" 200 None 2024-04-15 11:30:09,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8e01878cc2be8a9762cc842f970adbdfabdfdb29?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:30:09,935 [ scc.repo] DEBUG - PR 477 will-moore 'Vite' 2024-04-15 11:30:09,936 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:30:09,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-15 11:30:09,936 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:09,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:09,942 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:30:09,947 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:30:09,947 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:30:09,954 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:30:09,961 [ scc.git] DEBUG Already up to date. 2024-04-15 11:30:09,961 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-04-15 11:30:10,366 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-04-15 11:30:10,366 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-04-15 11:30:10,372 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:30:10,372 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:10,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:10,379 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8e01878cc2be8a9762cc842f970adbdfabdfdb29' 2024-04-15 11:30:10,405 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:10,412 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Vite) 8e01878cc2be8a9762cc842f970adbdfabdfdb29' 2024-04-15 11:30:10,443 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-04-15 11:30:10,444 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:30:10,498 [ scc.git] DEBUG .bumpversion.cfg | 1 + 2024-04-15 11:30:10,498 [ scc.git] DEBUG .gitignore | 5 +- 2024-04-15 11:30:10,498 [ scc.git] DEBUG Dockerfile | 15 - 2024-04-15 11:30:10,498 [ scc.git] DEBUG Gruntfile.js | 177 - 2024-04-15 11:30:10,498 [ scc.git] DEBUG README.rst | 58 +- 2024-04-15 11:30:10,498 [ scc.git] DEBUG deploy_build.sh | 12 + 2024-04-15 11:30:10,498 [ scc.git] DEBUG docs/demo/index.html | 940 --- 2024-04-15 11:30:10,498 [ scc.git] DEBUG .../static/figure/3rdparty/backbone-1.0.0.js | 1571 ---- 2024-04-15 11:30:10,498 [ scc.git] DEBUG .../figure/3rdparty/backbone.mousetrap/README.md | 28 - 2024-04-15 11:30:10,498 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/css/bootstrap.css | 6805 ---------------- 2024-04-15 11:30:10,498 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/css/bootstrap.min.css | 9 - 2024-04-15 11:30:10,498 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.eot | Bin 14079 -> 0 bytes 2024-04-15 11:30:10,498 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.svg | 228 - 2024-04-15 11:30:10,498 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.ttf | Bin 29512 -> 0 bytes 2024-04-15 11:30:10,498 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.woff | Bin 16448 -> 0 bytes 2024-04-15 11:30:10,498 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/js/bootstrap.js | 1999 ----- 2024-04-15 11:30:10,498 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/js/bootstrap.min.js | 6 - 2024-04-15 11:30:10,498 [ scc.git] DEBUG .../css/bootstrap-colorpicker.css | 217 - 2024-04-15 11:30:10,498 [ scc.git] DEBUG .../css/bootstrap-colorpicker.min.css | 9 - 2024-04-15 11:30:10,498 [ scc.git] DEBUG .../img/bootstrap-colorpicker/alpha-horizontal.png | Bin 3635 -> 0 bytes 2024-04-15 11:30:10,499 [ scc.git] DEBUG .../img/bootstrap-colorpicker/alpha.png | Bin 3271 -> 0 bytes 2024-04-15 11:30:10,499 [ scc.git] DEBUG .../img/bootstrap-colorpicker/hue.png | Bin 2972 -> 0 bytes 2024-04-15 11:30:10,499 [ scc.git] DEBUG .../img/bootstrap-colorpicker/saturation.png | Bin 8817 -> 0 bytes 2024-04-15 11:30:10,499 [ scc.git] DEBUG .../js/bootstrap-colorpicker.js | 1028 --- 2024-04-15 11:30:10,499 [ scc.git] DEBUG .../js/bootstrap-colorpicker.min.js | 1 - 2024-04-15 11:30:10,499 [ scc.git] DEBUG .../figure/3rdparty/jquery-1.11.1/jquery.min.js | 4 - 2024-04-15 11:30:10,499 [ scc.git] DEBUG .../jquery-ui-1.10.4/css/jquery.ui.base.css | 28 - 2024-04-15 11:30:10,499 [ scc.git] DEBUG .../jquery-ui-1.10.4/css/jquery.ui.slider.css | 73 - 2024-04-15 11:30:10,499 [ scc.git] DEBUG .../3rdparty/jquery-ui-1.10.4/jquery-ui.min.js | 12 - 2024-04-15 11:30:10,499 [ scc.git] DEBUG omero_figure/static/figure/3rdparty/json2.js | 481 -- 2024-04-15 11:30:10,499 [ scc.git] DEBUG .../markdown-browser-0.6.0-beta1/markdown.js | 1740 ----- 2024-04-15 11:30:10,499 [ scc.git] DEBUG .../markdown-browser-0.6.0-beta1/markdown.min.js | 1 - 2024-04-15 11:30:10,499 [ scc.git] DEBUG .../3rdparty/mousetrap-1.5.3/mousetrap.min.js | 11 - 2024-04-15 11:30:10,499 [ scc.git] DEBUG .../figure/3rdparty/raphael-2.1.2/raphael-min.js | 11 - 2024-04-15 11:30:10,499 [ scc.git] DEBUG .../figure/3rdparty/raphael-2.1.2/raphael.js | 8117 -------------------- 2024-04-15 11:30:10,499 [ scc.git] DEBUG .../figure/3rdparty/raphael-2.1.2/scaleraphael.js | 102 - 2024-04-15 11:30:10,499 [ scc.git] DEBUG .../figure/3rdparty/underscore-1.13.1-umd-min.js | 6 - 2024-04-15 11:30:10,499 [ scc.git] DEBUG omero_figure/templates/figure/index.html | 1175 --- 2024-04-15 11:30:10,499 [ scc.git] DEBUG omero_figure/views.py | 59 +- 2024-04-15 11:30:10,499 [ scc.git] DEBUG package-lock.json | 6531 +--------------- 2024-04-15 11:30:10,499 [ scc.git] DEBUG package.json | 27 +- 2024-04-15 11:30:10,499 [ scc.git] DEBUG setup.py | 9 +- 2024-04-15 11:30:10,499 [ scc.git] DEBUG spec/ViewportViewSpec.js | 99 - 2024-04-15 11:30:10,499 [ scc.git] DEBUG spec/images/testImage.png | Bin 24088 -> 0 bytes 2024-04-15 11:30:10,499 [ scc.git] DEBUG 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11:30:10,502 [ scc.git] DEBUG .../images/square-outline-icon-16.png | Bin 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/index.html | 1891 +++++ 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/app.js | 185 - 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/main.js | 167 + 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/models/figure_model.js | 101 +- 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/models/panel_model.js | 10 +- 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/models/roi_model.js | 7 +- 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/models/undo.js | 10 +- 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/shapeEditorTest.js | 259 + 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 557 ++ 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/shape_editor/line.js | 586 ++ 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 417 + 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/shape_editor/rect.js | 497 ++ 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 671 ++ 2024-04-15 11:30:10,503 [ scc.git] DEBUG .../js/views}/backbone.mousetrap.js | 18 +- 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 150 +- 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/views/chgrp_modal_view.js | 27 +- 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/views/colorpicker.js | 132 +- 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/views/crop_modal_view.js | 38 +- 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/views/figure_view.js | 144 +- 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/views/files.js | 82 +- 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/views/info_panel_view.js | 20 +- 2024-04-15 11:30:10,503 [ scc.git] DEBUG src/js/views/labels_from_maps_modal.js | 53 +- 2024-04-15 11:30:10,504 [ scc.git] DEBUG src/js/views/legend_view.js | 13 +- 2024-04-15 11:30:10,504 [ scc.git] DEBUG src/js/views/lutpicker.js | 39 +- 2024-04-15 11:30:10,504 [ scc.git] DEBUG src/js/views/modal_views.js | 57 +- 2024-04-15 11:30:10,504 [ scc.git] DEBUG src/js/views/panel_view.js | 39 +- 2024-04-15 11:30:10,504 [ scc.git] DEBUG src/js/views/raphael-rect.js | 6 +- 2024-04-15 11:30:10,504 [ scc.git] DEBUG src/js/views/right_panel_view.js | 443 +- 2024-04-15 11:30:10,504 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 17 +- 2024-04-15 11:30:10,504 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 47 +- 2024-04-15 11:30:10,504 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 24 +- 2024-04-15 11:30:10,504 [ scc.git] DEBUG src/js/views/svg_model_view.js | 11 +- 2024-04-15 11:30:10,504 [ scc.git] DEBUG .../ome.csrf.js => src/js/views/util.csrf.js | 29 +- 2024-04-15 11:30:10,504 [ scc.git] DEBUG src/js/views/util.js | 68 +- 2024-04-15 11:30:10,504 [ scc.git] DEBUG src/js/views/zt_sliders_view.js | 332 + 2024-04-15 11:30:10,504 [ scc.git] DEBUG src/scss/styles.scss | 2 + 2024-04-15 11:30:10,504 [ scc.git] DEBUG src/shapeEditorTest.html | 149 + 2024-04-15 11:30:10,504 [ scc.git] DEBUG src/templates/channel_slider.template.html | 91 + 2024-04-15 11:30:10,504 [ scc.git] DEBUG src/templates/channel_slider_template.html | 78 - 2024-04-15 11:30:10,504 [ scc.git] DEBUG ...el_template.html => figure_panel.template.html} | 2 +- 2024-04-15 11:30:10,505 [ scc.git] DEBUG ...le_item.html => figure_file_item.template.html} | 0 2024-04-15 11:30:10,505 [ scc.git] DEBUG ...te.html => image_display_options.template.html} | 11 +- 2024-04-15 11:30:10,505 [ scc.git] DEBUG ...anel_template.html => info_panel.template.html} | 8 +- 2024-04-15 11:30:10,505 [ scc.git] DEBUG .../{label_template.html => label.template.html} | 0 2024-04-15 11:30:10,505 [ scc.git] DEBUG ...ate.html => label_right_vertical.template.html} | 0 2024-04-15 11:30:10,505 [ scc.git] DEBUG ...ble_template.html => label_table.template.html} | 0 2024-04-15 11:30:10,505 [ scc.git] DEBUG ..._template.html => label_vertical.template.html} | 0 2024-04-15 11:30:10,505 [ scc.git] DEBUG ...orm_template.html => labels_form.template.html} | 2 +- 2024-04-15 11:30:10,505 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 172 + 2024-04-15 11:30:10,505 [ scc.git] DEBUG src/templates/labels_form_inner_template.html | 173 - 2024-04-15 11:30:10,505 [ scc.git] DEBUG .../{lut_picker.html => lut_picker.template.html} | 6 +- 2024-04-15 11:30:10,505 [ scc.git] DEBUG ...modal_roi.html => crop_modal_roi.template.html} | 0 2024-04-15 11:30:10,505 [ scc.git] DEBUG ...mplate.html => paper_setup_modal.template.html} | 103 +- 2024-04-15 11:30:10,505 [ scc.git] DEBUG ...mplate.html => preview_id_change.template.html} | 54 +- 2024-04-15 11:30:10,505 [ scc.git] DEBUG ..._modal_roi.html => roi_modal_roi.template.html} | 4 +- 2024-04-15 11:30:10,505 [ scc.git] DEBUG ...al_shape.html => roi_modal_shape.template.html} | 0 2024-04-15 11:30:10,505 [ scc.git] DEBUG ...t_buttons.html => roi_zt_buttons.template.html} | 4 +- 2024-04-15 11:30:10,505 [ scc.git] DEBUG src/templates/rois_form.template.html | 94 + 2024-04-15 11:30:10,505 [ scc.git] DEBUG src/templates/rois_form_template.html | 93 - 2024-04-15 11:30:10,505 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 143 + 2024-04-15 11:30:10,505 [ scc.git] DEBUG src/templates/scalebar_form_template.html | 143 - 2024-04-15 11:30:10,505 [ scc.git] DEBUG ..._template.html => scalebar_panel.template.html} | 0 2024-04-15 11:30:10,505 [ scc.git] DEBUG ...r_template.html => shape_toolbar.template.html} | 62 +- 2024-04-15 11:30:10,505 [ scc.git] DEBUG src/templates/viewport.template.html | 5 + 2024-04-15 11:30:10,505 [ scc.git] DEBUG ..._template.html => viewport_inner.template.html} | 0 2024-04-15 11:30:10,505 [ scc.git] DEBUG src/templates/viewport_template.html | 9 - 2024-04-15 11:30:10,505 [ scc.git] DEBUG ...anel_template.html => xywh_panel.template.html} | 30 +- 2024-04-15 11:30:10,506 [ scc.git] DEBUG ..._crop_template.html => zoom_crop.template.html} | 10 +- 2024-04-15 11:30:10,506 [ scc.git] DEBUG vite.config.js | 21 + 2024-04-15 11:30:10,506 [ scc.git] DEBUG 136 files changed, 7924 insertions(+), 32992 deletions(-) 2024-04-15 11:30:10,506 [ scc.git] DEBUG delete mode 100644 Dockerfile 2024-04-15 11:30:10,506 [ scc.git] DEBUG delete mode 100644 Gruntfile.js 2024-04-15 11:30:10,506 [ scc.git] DEBUG create mode 100755 deploy_build.sh 2024-04-15 11:30:10,506 [ scc.git] DEBUG delete mode 100644 docs/demo/index.html 2024-04-15 11:30:10,506 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/backbone-1.0.0.js 2024-04-15 11:30:10,506 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/backbone.mousetrap/README.md 2024-04-15 11:30:10,506 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/css/bootstrap.css 2024-04-15 11:30:10,506 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/css/bootstrap.min.css 2024-04-15 11:30:10,506 [ scc.git] DEBUG delete mode 100755 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src/js/shape_editor/ellipse.js 2024-04-15 11:30:10,508 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/line.js 2024-04-15 11:30:10,508 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/polygon.js 2024-04-15 11:30:10,508 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/rect.js 2024-04-15 11:30:10,508 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/shape_manager.js 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename {omero_figure/static/figure/3rdparty/backbone.mousetrap => src/js/views}/backbone.mousetrap.js (76%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG mode change 100755 => 100644 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename omero_figure/static/figure/3rdparty/ome.csrf.js => src/js/views/util.csrf.js (84%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG create mode 100644 src/js/views/zt_sliders_view.js 2024-04-15 11:30:10,508 [ scc.git] DEBUG create mode 100644 src/scss/styles.scss 2024-04-15 11:30:10,508 [ scc.git] DEBUG create mode 100644 src/shapeEditorTest.html 2024-04-15 11:30:10,508 [ scc.git] DEBUG create mode 100644 src/templates/channel_slider.template.html 2024-04-15 11:30:10,508 [ scc.git] DEBUG delete mode 100644 src/templates/channel_slider_template.html 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename src/templates/{figure_panel_template.html => figure_panel.template.html} (77%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename src/templates/files/{figure_file_item.html => figure_file_item.template.html} (100%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename src/templates/{image_display_options_template.html => image_display_options.template.html} (54%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename src/templates/{info_panel_template.html => info_panel.template.html} (90%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename src/templates/labels/{label_template.html => label.template.html} (100%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename src/templates/labels/{label_right_vertical_template.html => label_right_vertical.template.html} (100%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename src/templates/labels/{label_table_template.html => label_table.template.html} (100%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename src/templates/labels/{label_vertical_template.html => label_vertical.template.html} (100%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename src/templates/{labels_form_template.html => labels_form.template.html} (89%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG create mode 100644 src/templates/labels_form_inner.template.html 2024-04-15 11:30:10,508 [ scc.git] DEBUG delete mode 100644 src/templates/labels_form_inner_template.html 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename src/templates/{lut_picker.html => lut_picker.template.html} (64%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename src/templates/modal_dialogs/{crop_modal_roi.html => crop_modal_roi.template.html} (100%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename src/templates/modal_dialogs/{paper_setup_modal_template.html => paper_setup_modal.template.html} (54%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename src/templates/modal_dialogs/{preview_Id_change_template.html => preview_id_change.template.html} (52%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_roi.html => roi_modal_roi.template.html} (94%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_shape.html => roi_modal_shape.template.html} (100%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_zt_buttons.html => roi_zt_buttons.template.html} (62%) 2024-04-15 11:30:10,508 [ scc.git] DEBUG create mode 100644 src/templates/rois_form.template.html 2024-04-15 11:30:10,508 [ scc.git] DEBUG delete mode 100644 src/templates/rois_form_template.html 2024-04-15 11:30:10,508 [ scc.git] DEBUG create mode 100644 src/templates/scalebar_form.template.html 2024-04-15 11:30:10,509 [ scc.git] DEBUG delete mode 100644 src/templates/scalebar_form_template.html 2024-04-15 11:30:10,509 [ scc.git] DEBUG rename src/templates/{scalebar_panel_template.html => scalebar_panel.template.html} (100%) 2024-04-15 11:30:10,509 [ scc.git] DEBUG rename src/templates/shapes/{shape_toolbar_template.html => shape_toolbar.template.html} (60%) 2024-04-15 11:30:10,509 [ scc.git] DEBUG create mode 100644 src/templates/viewport.template.html 2024-04-15 11:30:10,509 [ scc.git] DEBUG rename src/templates/{viewport_inner_template.html => viewport_inner.template.html} (100%) 2024-04-15 11:30:10,509 [ scc.git] DEBUG delete mode 100644 src/templates/viewport_template.html 2024-04-15 11:30:10,509 [ scc.git] DEBUG rename src/templates/{xywh_panel_template.html => xywh_panel.template.html} (64%) 2024-04-15 11:30:10,509 [ scc.git] DEBUG rename src/templates/{zoom_crop_template.html => zoom_crop.template.html} (54%) 2024-04-15 11:30:10,509 [ scc.git] DEBUG create mode 100644 vite.config.js 2024-04-15 11:30:10,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:30:10,666 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:30:10,713 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:10,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:10,719 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:30:10,760 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:30:10,773 [ scc.git] DEBUG has no local changes 2024-04-15 11:30:10,773 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 549 will-moore 'Inset feature' (stage: draft) - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 477 will-moore 'Vite' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:30:10,788 [ scc.git] DEBUG [detached HEAD e8d53a83] merge master -Dorg -Ssuccess-only 2024-04-15 11:30:10,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:30:10,789 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:30:11,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-04-15 11:30:11,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-04-15 11:30:12,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-04-15 11:30:12,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-04-15 11:30:13,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:30:13,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-04-15 11:30:13,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:30:13,982 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-04-15 11:30:13,983 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:30:13,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-15 11:30:13,983 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:13,983 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:13,989 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:30:13,995 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:30:13,995 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:30:14,003 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:30:14,010 [ scc.git] DEBUG Already up to date. 2024-04-15 11:30:14,010 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-04-15 11:30:14,472 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-04-15 11:30:14,472 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-04-15 11:30:14,477 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:30:14,477 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:14,477 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:14,482 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-04-15 11:30:14,488 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:14,493 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-04-15 11:30:14,510 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-04-15 11:30:14,511 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:30:14,514 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-04-15 11:30:14,514 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-04-15 11:30:14,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:30:14,682 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:30:14,724 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:14,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:14,729 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:30:14,773 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:30:14,781 [ scc.git] DEBUG has no local changes 2024-04-15 11:30:14,781 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:30:14,790 [ scc.git] DEBUG [detached HEAD 13732e9] merge master -Dorg -Ssuccess-only 2024-04-15 11:30:14,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:30:14,791 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:30:15,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-04-15 11:30:15,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-04-15 11:30:15,643 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-15 11:30:16,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-04-15 11:30:16,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:30:17,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-15 11:30:17,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-04-15 11:30:18,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:30:18,295 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-04-15 11:30:18,295 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:30:18,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-15 11:30:18,295 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:18,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:18,301 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:30:18,306 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:30:18,306 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:30:18,311 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:30:18,318 [ scc.git] DEBUG Already up to date. 2024-04-15 11:30:18,318 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-04-15 11:30:18,709 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-04-15 11:30:18,709 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-04-15 11:30:18,714 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:30:18,714 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:18,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:18,720 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-04-15 11:30:18,725 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:18,730 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-04-15 11:30:18,741 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:30:18,745 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-04-15 11:30:18,745 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-04-15 11:30:18,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:30:18,908 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:30:18,952 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:18,953 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:18,958 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:30:19,000 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:30:19,008 [ scc.git] DEBUG has no local changes 2024-04-15 11:30:19,008 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:30:19,017 [ scc.git] DEBUG [detached HEAD 301ffe6] merge master -Dorg -Ssuccess-only 2024-04-15 11:30:19,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:30:19,018 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:30:19,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-04-15 11:30:19,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/469 HTTP/1.1" 200 None 2024-04-15 11:30:20,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe HTTP/1.1" 200 None 2024-04-15 11:30:20,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:30:21,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-15 11:30:21,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe HTTP/1.1" 200 None 2024-04-15 11:30:22,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ca8b5aabef9a5358f93add750f4cbb51c864b7fe?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:30:22,272 [ scc.repo] DEBUG - PR 469 will-moore 'changelog 0.14.0' 2024-04-15 11:30:22,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-04-15 11:30:23,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-04-15 11:30:23,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/efda99710532f9743896717e88f0e68ca23ec3b2 HTTP/1.1" 200 None 2024-04-15 11:30:24,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/efda99710532f9743896717e88f0e68ca23ec3b2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:30:24,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/efda99710532f9743896717e88f0e68ca23ec3b2/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-15 11:30:25,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/efda99710532f9743896717e88f0e68ca23ec3b2 HTTP/1.1" 200 None 2024-04-15 11:30:25,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/efda99710532f9743896717e88f0e68ca23ec3b2?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:30:25,716 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-04-15 11:30:26,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/464 HTTP/1.1" 200 None 2024-04-15 11:30:26,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/464/comments HTTP/1.1" 200 None 2024-04-15 11:30:27,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98 HTTP/1.1" 200 None 2024-04-15 11:30:27,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:30:28,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-15 11:30:28,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98 HTTP/1.1" 200 None 2024-04-15 11:30:29,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/97542d9b749f93d4902f7dce703bbf2a04316a98?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:30:29,058 [ scc.repo] DEBUG - PR 464 will-moore 'Tile load error warning' 2024-04-15 11:30:29,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-04-15 11:30:29,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-04-15 11:30:30,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-04-15 11:30:30,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:30:31,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-04-15 11:30:31,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:30:31,862 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-04-15 11:30:32,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/456 HTTP/1.1" 200 None 2024-04-15 11:30:32,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/456/comments HTTP/1.1" 200 None 2024-04-15 11:30:33,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745 HTTP/1.1" 200 None 2024-04-15 11:30:33,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:30:34,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-15 11:30:34,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745 HTTP/1.1" 200 None 2024-04-15 11:30:35,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:30:35,095 [ scc.repo] DEBUG - PR 456 will-moore 'Don't use tiles for non-big movies' 2024-04-15 11:30:35,095 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:30:35,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-15 11:30:35,096 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:35,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:35,103 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:30:35,108 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:30:35,109 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:30:35,114 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:30:35,119 [ scc.git] DEBUG Already up to date. 2024-04-15 11:30:35,119 [ scc.git] DEBUG Calling 'git fetch origin pull/456/head' 2024-04-15 11:30:35,574 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-15 11:30:35,574 [ scc.git] DEBUG * branch refs/pull/456/head -> FETCH_HEAD 2024-04-15 11:30:35,580 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-04-15 11:30:35,988 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-15 11:30:35,989 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-04-15 11:30:35,996 [ scc.git] DEBUG Calling 'git fetch origin pull/464/head' 2024-04-15 11:30:36,465 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-15 11:30:36,465 [ scc.git] DEBUG * branch refs/pull/464/head -> FETCH_HEAD 2024-04-15 11:30:36,471 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-04-15 11:30:37,325 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-15 11:30:37,325 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-04-15 11:30:37,330 [ scc.git] DEBUG Calling 'git fetch origin pull/469/head' 2024-04-15 11:30:37,755 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-15 11:30:37,755 [ scc.git] DEBUG * branch refs/pull/469/head -> FETCH_HEAD 2024-04-15 11:30:37,760 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:30:37,760 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:37,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:37,766 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2954dd294c5d9f89b64ca4cedcc76dd0c9a32745' 2024-04-15 11:30:37,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:37,778 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 456 (Don't use tiles for non-big movies) 2954dd294c5d9f89b64ca4cedcc76dd0c9a32745' 2024-04-15 11:30:37,809 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:30:37,812 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 5 +++-- 2024-04-15 11:30:37,812 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 2 deletions(-) 2024-04-15 11:30:37,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:30:37,970 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-04-15 11:30:37,976 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:37,982 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-04-15 11:30:38,019 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:30:38,022 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-04-15 11:30:38,022 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-04-15 11:30:38,023 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-04-15 11:30:38,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:30:38,391 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...97542d9b749f93d4902f7dce703bbf2a04316a98' 2024-04-15 11:30:38,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:38,403 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 464 (Tile load error warning) 97542d9b749f93d4902f7dce703bbf2a04316a98' 2024-04-15 11:30:38,426 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:30:38,432 [ scc.git] DEBUG css/app.css | 22 ++++++++++++++++++++++ 2024-04-15 11:30:38,432 [ scc.git] DEBUG src/events/events.js | 2 ++ 2024-04-15 11:30:38,432 [ scc.git] DEBUG src/index-dev.html | 6 +++--- 2024-04-15 11:30:38,432 [ scc.git] DEBUG src/viewers/ol3-viewer.html | 2 +- 2024-04-15 11:30:38,432 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 4 +++- 2024-04-15 11:30:38,433 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 39 +++++++++++++++++++++++++++++++++++++-- 2024-04-15 11:30:38,433 [ scc.git] DEBUG 6 files changed, 68 insertions(+), 7 deletions(-) 2024-04-15 11:30:38,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:30:38,812 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...efda99710532f9743896717e88f0e68ca23ec3b2' 2024-04-15 11:30:38,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:38,826 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) efda99710532f9743896717e88f0e68ca23ec3b2' 2024-04-15 11:30:38,860 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-04-15 11:30:38,861 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:30:38,866 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-04-15 11:30:38,866 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-04-15 11:30:38,866 [ scc.git] DEBUG src/app/header.html | 5 + 2024-04-15 11:30:38,866 [ scc.git] DEBUG src/app/header.js | 46 ++++++++- 2024-04-15 11:30:38,866 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-04-15 11:30:38,866 [ scc.git] DEBUG src/utils/figure.js | 210 ++++++++++++++++++++++++++++++++++++++++++ 2024-04-15 11:30:38,866 [ scc.git] DEBUG 6 files changed, 284 insertions(+), 6 deletions(-) 2024-04-15 11:30:38,866 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-04-15 11:30:39,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:30:39,233 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ca8b5aabef9a5358f93add750f4cbb51c864b7fe' 2024-04-15 11:30:39,241 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:39,245 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 469 (changelog 0.14.0) ca8b5aabef9a5358f93add750f4cbb51c864b7fe' 2024-04-15 11:30:39,258 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:30:39,260 [ scc.git] DEBUG CHANGELOG.md | 9 ++++++++- 2024-04-15 11:30:39,260 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-04-15 11:30:39,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:30:39,639 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:30:39,682 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:39,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:39,689 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:30:39,730 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:30:39,738 [ scc.git] DEBUG has no local changes 2024-04-15 11:30:39,738 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 456 will-moore 'Don't use tiles for non-big movies' - PR 460 will-moore 'Channel min spinner fix' - PR 464 will-moore 'Tile load error warning' - PR 465 will-moore 'Save as Figure' - PR 469 will-moore 'changelog 0.14.0' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:30:39,748 [ scc.git] DEBUG [detached HEAD 5c1e9e2] merge master -Dorg -Ssuccess-only 2024-04-15 11:30:39,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:30:39,749 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:30:40,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-04-15 11:30:40,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-04-15 11:30:41,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-04-15 11:30:41,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-04-15 11:30:42,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:30:42,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-15 11:30:43,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-04-15 11:30:43,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:30:43,536 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-04-15 11:30:43,536 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:30:43,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-15 11:30:43,536 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:43,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:43,542 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:30:43,547 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:30:43,548 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:30:43,552 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:30:43,557 [ scc.git] DEBUG Already up to date. 2024-04-15 11:30:43,557 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-04-15 11:30:43,975 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-04-15 11:30:43,975 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-04-15 11:30:43,980 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:30:43,980 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:43,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:43,985 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-04-15 11:30:43,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:43,996 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-04-15 11:30:44,009 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:30:44,012 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-04-15 11:30:44,012 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-04-15 11:30:44,012 [ scc.git] DEBUG requirements.txt | 2 +- 2024-04-15 11:30:44,012 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-04-15 11:30:44,012 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-04-15 11:30:44,012 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-04-15 11:30:44,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:30:44,241 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:30:44,282 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:44,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:44,288 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:30:44,327 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:30:44,334 [ scc.git] DEBUG has no local changes 2024-04-15 11:30:44,335 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:30:44,343 [ scc.git] DEBUG [detached HEAD 71949ad] merge master -Dorg -Ssuccess-only 2024-04-15 11:30:44,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:30:44,343 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:30:44,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-04-15 11:30:45,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-04-15 11:30:45,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-04-15 11:30:46,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-04-15 11:30:46,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:30:47,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-04-15 11:30:47,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:30:47,601 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-04-15 11:30:48,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-04-15 11:30:48,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-04-15 11:30:49,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-04-15 11:30:49,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:30:49,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-04-15 11:30:50,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:30:50,416 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-04-15 11:30:50,416 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:30:50,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-15 11:30:50,417 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:50,417 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:50,423 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:30:50,427 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:30:50,428 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:30:50,433 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:30:50,438 [ scc.git] DEBUG Already up to date. 2024-04-15 11:30:50,438 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-04-15 11:30:50,992 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-04-15 11:30:50,992 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-04-15 11:30:50,999 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-04-15 11:30:51,588 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-04-15 11:30:51,589 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-04-15 11:30:51,593 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:30:51,593 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:51,594 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:51,599 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-15 11:30:51,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:51,609 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-15 11:30:51,662 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-04-15 11:30:51,662 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-04-15 11:30:51,662 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-04-15 11:30:51,662 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-04-15 11:30:51,662 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-15 11:30:51,663 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-15 11:30:51,669 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-15 11:30:51,676 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-15 11:30:51,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:30:51,857 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-15 11:30:51,864 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-15 11:30:51,869 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#33](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-04-15 11:30:51,875 [ scc.config] DEBUG Found github.token 2024-04-15 11:30:51,875 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-04-15 11:30:51,875 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-15 11:30:51,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:51,889 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-15 11:30:51,922 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-04-15 11:30:51,922 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-04-15 11:30:51,922 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-04-15 11:30:51,922 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-15 11:30:51,923 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-15 11:30:51,930 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-15 11:30:51,937 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-15 11:30:52,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:30:52,284 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-15 11:30:52,291 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-15 11:30:52,296 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#33](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-04-15 11:30:52,300 [ scc.config] DEBUG Found github.token 2024-04-15 11:30:52,301 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-04-15 11:30:52,301 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:30:52,337 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:30:52,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:30:52,343 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:30:52,381 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:30:52,388 [ scc.git] DEBUG has no local changes 2024-04-15 11:30:52,389 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:30:52,397 [ scc.git] DEBUG [detached HEAD f6d3602] merge master -Dorg -Ssuccess-only 2024-04-15 11:30:52,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:30:52,398 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:30:52,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-04-15 11:30:53,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-04-15 11:30:53,304 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-15 11:30:53,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-04-15 11:30:54,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:30:54,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-15 11:30:55,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-04-15 11:30:55,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:30:55,700 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-04-15 11:30:56,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-04-15 11:30:56,160 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-15 11:30:56,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-04-15 11:30:57,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:30:57,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-15 11:30:58,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-04-15 11:30:58,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:30:58,613 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-04-15 11:30:59,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-04-15 11:30:59,093 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-15 11:30:59,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-04-15 11:31:00,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:31:00,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-15 11:31:01,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-04-15 11:31:01,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:31:01,694 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-04-15 11:31:02,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-04-15 11:31:02,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-04-15 11:31:03,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-04-15 11:31:03,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-04-15 11:31:03,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-04-15 11:31:04,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-04-15 11:31:04,505 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:31:04,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-15 11:31:04,505 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:04,505 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:04,512 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:31:04,518 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:31:04,518 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:31:04,525 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:31:04,531 [ scc.git] DEBUG Already up to date. 2024-04-15 11:31:04,531 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-04-15 11:31:04,913 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-15 11:31:04,913 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-04-15 11:31:04,918 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-04-15 11:31:05,300 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-15 11:31:05,301 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-04-15 11:31:05,308 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-04-15 11:31:05,728 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-15 11:31:05,728 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-04-15 11:31:05,734 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:31:05,734 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:05,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:05,740 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-04-15 11:31:05,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:05,750 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-04-15 11:31:05,761 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:31:05,764 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-04-15 11:31:05,764 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-04-15 11:31:05,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:05,915 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-04-15 11:31:05,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:05,927 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-04-15 11:31:05,968 [ scc.git] DEBUG Auto-merging package-lock.json 2024-04-15 11:31:05,968 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:31:05,972 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-04-15 11:31:05,972 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-04-15 11:31:06,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:06,329 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-04-15 11:31:06,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:06,341 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-04-15 11:31:06,353 [ scc.git] DEBUG Auto-merging package-lock.json 2024-04-15 11:31:06,354 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:31:06,357 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-04-15 11:31:06,357 [ scc.git] DEBUG package.json | 2 +- 2024-04-15 11:31:06,357 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-04-15 11:31:06,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:06,753 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:31:06,794 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:06,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:06,800 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:31:06,838 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:31:06,845 [ scc.git] DEBUG has no local changes 2024-04-15 11:31:06,845 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:31:06,855 [ scc.git] DEBUG [detached HEAD 51d07b7] merge master -Dorg -Ssuccess-only 2024-04-15 11:31:06,856 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:06,856 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:31:07,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-04-15 11:31:07,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-04-15 11:31:08,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-04-15 11:31:08,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:31:09,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-04-15 11:31:09,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:31:09,725 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-04-15 11:31:09,726 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:31:09,726 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-15 11:31:09,726 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:09,726 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:09,732 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:31:09,738 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:31:09,738 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:31:09,745 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:31:09,752 [ scc.git] DEBUG Already up to date. 2024-04-15 11:31:09,752 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-04-15 11:31:10,137 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-04-15 11:31:10,137 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-04-15 11:31:10,145 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:31:10,145 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:10,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:10,155 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-04-15 11:31:10,166 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:10,175 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-04-15 11:31:10,202 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:31:10,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:10,418 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:31:10,467 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:10,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:10,474 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:31:10,516 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:31:10,523 [ scc.git] DEBUG has no local changes 2024-04-15 11:31:10,523 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:31:10,533 [ scc.git] DEBUG [detached HEAD d918c4c] merge master -Dorg -Ssuccess-only 2024-04-15 11:31:10,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:10,534 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:31:10,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-04-15 11:31:11,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-04-15 11:31:11,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-04-15 11:31:12,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-04-15 11:31:12,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-04-15 11:31:13,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:31:13,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-04-15 11:31:14,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:31:14,297 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-04-15 11:31:14,297 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:31:14,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-15 11:31:14,298 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:14,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:14,303 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:31:14,308 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:31:14,308 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:31:14,313 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:31:14,317 [ scc.git] DEBUG Already up to date. 2024-04-15 11:31:14,318 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-04-15 11:31:14,770 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-04-15 11:31:14,771 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-04-15 11:31:14,777 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:31:14,777 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:14,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:14,783 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-04-15 11:31:14,789 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:14,796 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-04-15 11:31:14,806 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-04-15 11:31:14,806 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:31:14,809 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-04-15 11:31:14,809 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-04-15 11:31:14,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:14,978 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:31:15,019 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:15,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:15,026 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:31:15,068 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:31:15,075 [ scc.git] DEBUG has no local changes 2024-04-15 11:31:15,075 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:31:15,083 [ scc.git] DEBUG [detached HEAD f0d257f] merge master -Dorg -Ssuccess-only 2024-04-15 11:31:15,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:15,084 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:31:15,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-04-15 11:31:15,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-04-15 11:31:16,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-04-15 11:31:17,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-04-15 11:31:17,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:31:17,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-04-15 11:31:18,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:31:18,353 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-04-15 11:31:18,353 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:31:18,353 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-15 11:31:18,353 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:18,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:18,361 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:31:18,366 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:31:18,367 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:31:18,371 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:31:18,376 [ scc.git] DEBUG Already up to date. 2024-04-15 11:31:18,376 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-04-15 11:31:18,794 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-04-15 11:31:18,795 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-04-15 11:31:18,799 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:31:18,800 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:18,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:18,806 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-15 11:31:18,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:18,819 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-15 11:31:18,853 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-04-15 11:31:18,854 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-04-15 11:31:18,854 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-04-15 11:31:18,854 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-04-15 11:31:18,854 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-04-15 11:31:18,854 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-04-15 11:31:18,854 [ scc.git] DEBUG Auto-merging setup.py 2024-04-15 11:31:18,854 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-04-15 11:31:18,854 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-15 11:31:18,854 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-15 11:31:18,862 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-04-15 11:31:18,869 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-04-15 11:31:19,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:19,024 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-15 11:31:19,032 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-04-15 11:31:19,038 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#33](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/urls.py - omero_signup/views.py - setup.py --conflicts 2024-04-15 11:31:19,043 [ scc.config] DEBUG Found github.token 2024-04-15 11:31:19,044 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-04-15 11:31:19,044 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:31:19,083 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:19,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:19,090 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:31:19,127 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:31:19,133 [ scc.git] DEBUG has no local changes 2024-04-15 11:31:19,133 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:31:19,141 [ scc.git] DEBUG [detached HEAD 04313d2] merge master -Dorg -Ssuccess-only 2024-04-15 11:31:19,141 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:19,142 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:31:19,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-04-15 11:31:20,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-04-15 11:31:20,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-04-15 11:31:20,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-04-15 11:31:21,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:31:21,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-04-15 11:31:22,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:31:22,261 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-04-15 11:31:22,261 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:31:22,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-15 11:31:22,262 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:22,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:22,272 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:31:22,279 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:31:22,279 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:31:22,286 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:31:22,291 [ scc.git] DEBUG Already up to date. 2024-04-15 11:31:22,292 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-04-15 11:31:22,756 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-04-15 11:31:22,756 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-04-15 11:31:22,762 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:31:22,763 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:22,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:22,770 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-04-15 11:31:22,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:22,785 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-04-15 11:31:22,812 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-15 11:31:22,816 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-04-15 11:31:22,817 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-04-15 11:31:22,817 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-04-15 11:31:22,817 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-04-15 11:31:22,817 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-04-15 11:31:22,817 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-04-15 11:31:22,817 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-04-15 11:31:22,817 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-04-15 11:31:22,817 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-04-15 11:31:22,817 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-04-15 11:31:22,817 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-04-15 11:31:22,817 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-04-15 11:31:22,817 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-04-15 11:31:22,819 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-04-15 11:31:22,819 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-04-15 11:31:22,819 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-04-15 11:31:22,820 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-04-15 11:31:22,820 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-04-15 11:31:22,820 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-04-15 11:31:22,820 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-04-15 11:31:22,820 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-04-15 11:31:22,820 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-04-15 11:31:22,820 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-04-15 11:31:22,820 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-04-15 11:31:22,821 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-04-15 11:31:22,821 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-04-15 11:31:22,821 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-04-15 11:31:22,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:22,976 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:31:23,096 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:23,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:23,105 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:31:23,145 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:31:23,166 [ scc.git] DEBUG has no local changes 2024-04-15 11:31:23,167 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:31:23,176 [ scc.git] DEBUG [detached HEAD 27da711] merge master -Dorg -Ssuccess-only 2024-04-15 11:31:23,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:23,177 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:31:23,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-04-15 11:31:23,412 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:31:23,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-15 11:31:23,412 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:23,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:23,419 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:31:23,426 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:31:23,426 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:31:23,435 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:31:23,443 [ scc.git] DEBUG Already up to date. 2024-04-15 11:31:23,443 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:31:23,443 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:23,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:23,449 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:31:23,491 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:23,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:23,497 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:31:23,535 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:31:23,542 [ scc.git] DEBUG has no local changes 2024-04-15 11:31:23,543 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:31:23,554 [ scc.git] DEBUG [detached HEAD 41d3502] merge master -Dorg -Ssuccess-only 2024-04-15 11:31:23,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:23,555 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:31:23,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-04-15 11:31:23,840 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:31:23,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-15 11:31:23,840 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:23,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:23,848 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:31:23,855 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:31:23,855 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:31:23,861 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:31:23,867 [ scc.git] DEBUG Already up to date. 2024-04-15 11:31:23,867 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:31:23,867 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:23,867 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:23,873 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:31:23,921 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:23,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:23,928 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:31:23,977 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:31:23,986 [ scc.git] DEBUG has no local changes 2024-04-15 11:31:23,987 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:31:23,997 [ scc.git] DEBUG [detached HEAD ad5997b] merge master -Dorg -Ssuccess-only 2024-04-15 11:31:23,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:23,998 [ scc.git] INFO Overriding base-branch from master to main 2024-04-15 11:31:23,998 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:31:24,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-04-15 11:31:24,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-04-15 11:31:25,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-04-15 11:31:25,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-04-15 11:31:26,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-04-15 11:31:26,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:31:27,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-15 11:31:27,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-04-15 11:31:28,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:31:28,210 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-04-15 11:31:28,211 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:31:28,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-15 11:31:28,211 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:28,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:28,217 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-04-15 11:31:28,223 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:31:28,223 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-04-15 11:31:28,232 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-04-15 11:31:28,240 [ scc.git] DEBUG Already up to date. 2024-04-15 11:31:28,240 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-04-15 11:31:28,790 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-04-15 11:31:28,790 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-04-15 11:31:28,798 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:31:28,798 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:28,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:28,808 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-15 11:31:28,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:28,823 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-15 11:31:28,861 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-04-15 11:31:28,861 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-04-15 11:31:28,861 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-15 11:31:28,862 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-15 11:31:28,869 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-04-15 11:31:28,879 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-04-15 11:31:29,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:29,043 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-15 11:31:29,050 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-04-15 11:31:29,056 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#33](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-04-15 11:31:29,061 [ scc.config] DEBUG Found github.token 2024-04-15 11:31:29,061 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-04-15 11:31:29,062 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:31:29,104 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:29,104 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:29,111 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:31:29,167 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:31:29,175 [ scc.git] DEBUG has no local changes 2024-04-15 11:31:29,175 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:31:29,185 [ scc.git] DEBUG [detached HEAD 42fb663] merge master -Dorg -Ssuccess-only 2024-04-15 11:31:29,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:29,186 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:31:29,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-04-15 11:31:29,477 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:31:29,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-15 11:31:29,477 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:29,477 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:29,484 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:31:29,495 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:31:29,496 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:31:29,506 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:31:29,516 [ scc.git] DEBUG Already up to date. 2024-04-15 11:31:29,516 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:31:29,516 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:29,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:29,525 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:31:29,581 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:29,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:29,589 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:31:29,672 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:31:29,686 [ scc.git] DEBUG has no local changes 2024-04-15 11:31:29,686 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:31:29,704 [ scc.git] DEBUG [detached HEAD 25a07cb] merge master -Dorg -Ssuccess-only 2024-04-15 11:31:29,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:29,704 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:31:29,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-04-15 11:31:29,900 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:31:29,900 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-15 11:31:29,901 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:29,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:29,917 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:31:29,927 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:31:29,928 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:31:29,940 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:31:29,954 [ scc.git] DEBUG Already up to date. 2024-04-15 11:31:29,954 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:31:29,954 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:29,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:29,967 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:31:30,089 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:30,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:30,099 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:31:30,151 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:31:30,159 [ scc.git] DEBUG has no local changes 2024-04-15 11:31:30,159 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:31:30,171 [ scc.git] DEBUG [detached HEAD 622b2d8] merge master -Dorg -Ssuccess-only 2024-04-15 11:31:30,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:30,172 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:31:30,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-04-15 11:31:30,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-04-15 11:31:31,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-04-15 11:31:31,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-04-15 11:31:32,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:31:32,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-04-15 11:31:33,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:31:33,181 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-04-15 11:31:33,182 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:31:33,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-15 11:31:33,182 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:33,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:33,192 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-15 11:31:33,202 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:31:33,203 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-15 11:31:33,216 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-15 11:31:33,232 [ scc.git] DEBUG Already up to date. 2024-04-15 11:31:33,233 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-04-15 11:31:33,701 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-04-15 11:31:33,701 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-04-15 11:31:33,705 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:31:33,706 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:33,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:33,712 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-15 11:31:33,719 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:33,724 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-15 11:31:33,811 [ scc.git] DEBUG Auto-merging Dockerfile 2024-04-15 11:31:33,811 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-04-15 11:31:33,811 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-15 11:31:33,811 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-15 11:31:33,817 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-04-15 11:31:33,825 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-04-15 11:31:34,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:34,004 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-15 11:31:34,014 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-04-15 11:31:34,020 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#33](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-04-15 11:31:34,028 [ scc.config] DEBUG Found github.token 2024-04-15 11:31:34,029 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-04-15 11:31:34,029 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:31:34,076 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:34,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:34,086 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:31:34,140 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:31:34,148 [ scc.git] DEBUG has no local changes 2024-04-15 11:31:34,149 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:31:34,160 [ scc.git] DEBUG [detached HEAD e43f6f8] merge master -Dorg -Ssuccess-only 2024-04-15 11:31:34,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:34,161 [ scc.git] INFO Overriding base-branch from master to develop 2024-04-15 11:31:34,161 [ scc.repo] DEBUG ## PRs found: 2024-04-15 11:31:34,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-04-15 11:31:35,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-04-15 11:31:35,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-04-15 11:31:35,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-04-15 11:31:36,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-04-15 11:31:36,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-04-15 11:31:37,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-04-15 11:31:37,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-04-15 11:31:38,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-15 11:31:38,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-04-15 11:31:39,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-04-15 11:31:39,123 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-04-15 11:31:39,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-04-15 11:31:40,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-04-15 11:31:40,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-04-15 11:31:41,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-04-15 11:31:41,050 [ scc.repo] DEBUG ## Branches found: 2024-04-15 11:31:41,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-15 11:31:41,050 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:41,050 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:41,061 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-04-15 11:31:41,071 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-15 11:31:41,071 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-04-15 11:31:41,079 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-04-15 11:31:41,088 [ scc.git] DEBUG Already up to date. 2024-04-15 11:31:41,089 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-04-15 11:31:41,508 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-04-15 11:31:41,509 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-04-15 11:31:41,515 [ scc.git] DEBUG ## Unique users: [] 2024-04-15 11:31:41,515 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:41,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:41,523 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-15 11:31:41,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:41,538 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-15 11:31:41,577 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-04-15 11:31:41,578 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-04-15 11:31:41,578 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-15 11:31:41,578 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-15 11:31:41,587 [ scc.git] DEBUG Calling 'git reset --hard 2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-04-15 11:31:41,594 [ scc.git] DEBUG HEAD is now at 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-04-15 11:31:41,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:41,757 [ scc.git] DEBUG Calling 'git merge-base 2078ac72dbf11f2733e685000a274eff81c2ac2d 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-15 11:31:41,770 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-04-15 11:31:41,782 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#33](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-04-15 11:31:41,794 [ scc.config] DEBUG Found github.token 2024-04-15 11:31:41,794 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-04-15 11:31:41,795 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-15 11:31:41,872 [ scc.git] DEBUG Get sha1 of %s 2024-04-15 11:31:41,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-15 11:31:41,885 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:31:41,950 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:31:41,960 [ scc.git] DEBUG has no local changes 2024-04-15 11:31:41,960 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:31:41,972 [ scc.git] DEBUG [detached HEAD 2ed9ecc] merge master -Dorg -Ssuccess-only 2024-04-15 11:31:41,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:41,973 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-15 11:31:42,060 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-04-15 11:31:42,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:42,244 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-04-15 11:31:42,250 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-04-15 11:31:42,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:42,671 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-04-15 11:31:42,676 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-04-15 11:31:43,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:43,092 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-04-15 11:31:43,097 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-04-15 11:31:43,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:43,517 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-04-15 11:31:43,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:43,919 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-04-15 11:31:43,925 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-04-15 11:31:44,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:44,334 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-04-15 11:31:44,340 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-04-15 11:31:44,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:44,741 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-04-15 11:31:44,747 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-04-15 11:31:45,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:45,145 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-04-15 11:31:45,150 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-04-15 11:31:45,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:45,566 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-04-15 11:31:45,572 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-04-15 11:31:45,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:45,982 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-04-15 11:31:45,988 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-04-15 11:31:46,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:46,389 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-04-15 11:31:46,395 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-04-15 11:31:46,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:46,790 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-04-15 11:31:46,794 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-04-15 11:31:47,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:47,200 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-04-15 11:31:47,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:47,608 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-04-15 11:31:48,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:48,023 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-04-15 11:31:48,027 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-04-15 11:31:48,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:48,468 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-04-15 11:31:48,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:48,883 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-04-15 11:31:49,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:49,284 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-04-15 11:31:49,289 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-04-15 11:31:49,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:49,694 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-04-15 11:31:49,700 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-04-15 11:31:50,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:50,112 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-04-15 11:31:50,119 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-04-15 11:31:50,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:50,515 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-04-15 11:31:50,519 [ scc.config] DEBUG Found submodule.scripts.url 2024-04-15 11:31:50,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-15 11:31:50,926 [ scc.config] DEBUG Found submodule.scripts.branch 2024-04-15 11:31:50,927 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-15 11:31:51,007 [ scc.git] DEBUG has local changes 2024-04-15 11:31:51,007 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 549 will-moore 'Inset feature' (stage: draft) - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 477 will-moore 'Vite' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 456 will-moore 'Don't use tiles for non-big movies' - PR 460 will-moore 'Channel min spinner fix' - PR 464 will-moore 'Tile load error warning' - PR 465 will-moore 'Save as Figure' - PR 469 will-moore 'changelog 0.14.0' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#33 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/33/)' 2024-04-15 11:31:51,024 [ scc.git] DEBUG [detached HEAD e8247d0] merge master -Dorg -Ssuccess-only 2024-04-15 11:31:51,025 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-04-15 11:31:51,025 [ scc.merge] INFO Repository: ome/omero-plugins 2024-04-15 11:31:51,025 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,025 [ scc.merge] INFO 2024-04-15 11:31:51,025 [ scc.merge] INFO 2024-04-15 11:31:51,025 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-04-15 11:31:51,025 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,025 [ scc.merge] INFO 2024-04-15 11:31:51,025 [ scc.merge] INFO 2024-04-15 11:31:51,025 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-04-15 11:31:51,025 [ scc.merge] INFO Excluded PRs: 2024-04-15 11:31:51,025 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-04-15 11:31:51,025 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,025 [ scc.merge] INFO 2024-04-15 11:31:51,025 [ scc.merge] INFO Merged PRs: 2024-04-15 11:31:51,025 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-04-15 11:31:51,025 [ scc.merge] INFO 2024-04-15 11:31:51,025 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-04-15 11:31:51,025 [ scc.merge] INFO Excluded PRs: 2024-04-15 11:31:51,026 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-04-15 11:31:51,026 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-04-15 11:31:51,026 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-04-15 11:31:51,026 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-04-15 11:31:51,026 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,026 [ scc.merge] INFO 2024-04-15 11:31:51,026 [ scc.merge] INFO Merged PRs: 2024-04-15 11:31:51,026 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-04-15 11:31:51,026 [ scc.merge] INFO 2024-04-15 11:31:51,026 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-04-15 11:31:51,026 [ scc.merge] INFO Excluded PRs: 2024-04-15 11:31:51,026 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-04-15 11:31:51,026 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-04-15 11:31:51,026 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,026 [ scc.merge] INFO 2024-04-15 11:31:51,026 [ scc.merge] INFO Merged PRs: 2024-04-15 11:31:51,026 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-04-15 11:31:51,026 [ scc.merge] INFO 2024-04-15 11:31:51,026 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-15 11:31:51,026 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-04-15 11:31:51,026 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-04-15 11:31:51,026 [ scc.merge] INFO 2024-04-15 11:31:51,026 [ scc.merge] INFO Repository: ome/omero-figure 2024-04-15 11:31:51,026 [ scc.merge] INFO Excluded PRs: 2024-04-15 11:31:51,026 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' (stage: draft) 2024-04-15 11:31:51,026 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (stage: draft) 2024-04-15 11:31:51,026 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,026 [ scc.merge] INFO 2024-04-15 11:31:51,026 [ scc.merge] INFO Merged PRs: 2024-04-15 11:31:51,026 [ scc.merge] INFO - PR 477 will-moore 'Vite' 2024-04-15 11:31:51,026 [ scc.merge] INFO 2024-04-15 11:31:51,026 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-04-15 11:31:51,026 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,026 [ scc.merge] INFO 2024-04-15 11:31:51,026 [ scc.merge] INFO Merged PRs: 2024-04-15 11:31:51,026 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-04-15 11:31:51,027 [ scc.merge] INFO 2024-04-15 11:31:51,027 [ scc.merge] INFO Repository: ome/omero-gallery 2024-04-15 11:31:51,027 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,027 [ scc.merge] INFO 2024-04-15 11:31:51,027 [ scc.merge] INFO Merged PRs: 2024-04-15 11:31:51,027 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-04-15 11:31:51,027 [ scc.merge] INFO 2024-04-15 11:31:51,027 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-04-15 11:31:51,027 [ scc.merge] INFO Excluded PRs: 2024-04-15 11:31:51,027 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-04-15 11:31:51,027 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-04-15 11:31:51,027 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,027 [ scc.merge] INFO 2024-04-15 11:31:51,027 [ scc.merge] INFO Merged PRs: 2024-04-15 11:31:51,027 [ scc.merge] INFO - PR 456 will-moore 'Don't use tiles for non-big movies' 2024-04-15 11:31:51,027 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-04-15 11:31:51,027 [ scc.merge] INFO - PR 464 will-moore 'Tile load error warning' 2024-04-15 11:31:51,027 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-04-15 11:31:51,027 [ scc.merge] INFO - PR 469 will-moore 'changelog 0.14.0' 2024-04-15 11:31:51,027 [ scc.merge] INFO 2024-04-15 11:31:51,027 [ scc.merge] INFO Repository: ome/omero-mapr 2024-04-15 11:31:51,027 [ scc.merge] INFO Excluded PRs: 2024-04-15 11:31:51,027 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-04-15 11:31:51,027 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,027 [ scc.merge] INFO 2024-04-15 11:31:51,027 [ scc.merge] INFO Merged PRs: 2024-04-15 11:31:51,027 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-04-15 11:31:51,027 [ scc.merge] INFO 2024-04-15 11:31:51,027 [ scc.merge] INFO Repository: ome/omero-metadata 2024-04-15 11:31:51,027 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,027 [ scc.merge] INFO 2024-04-15 11:31:51,027 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-15 11:31:51,027 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-04-15 11:31:51,027 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-04-15 11:31:51,027 [ scc.merge] INFO 2024-04-15 11:31:51,027 [ scc.merge] INFO Repository: ome/omero-parade 2024-04-15 11:31:51,027 [ scc.merge] INFO Excluded PRs: 2024-04-15 11:31:51,028 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-04-15 11:31:51,028 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-04-15 11:31:51,028 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-04-15 11:31:51,028 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,028 [ scc.merge] INFO 2024-04-15 11:31:51,028 [ scc.merge] INFO Merged PRs: 2024-04-15 11:31:51,028 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-04-15 11:31:51,028 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-04-15 11:31:51,028 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-04-15 11:31:51,028 [ scc.merge] INFO 2024-04-15 11:31:51,028 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-04-15 11:31:51,028 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,028 [ scc.merge] INFO 2024-04-15 11:31:51,028 [ scc.merge] INFO Merged PRs: 2024-04-15 11:31:51,028 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-04-15 11:31:51,028 [ scc.merge] INFO 2024-04-15 11:31:51,028 [ scc.merge] INFO Repository: ome/omero-rois 2024-04-15 11:31:51,028 [ scc.merge] INFO Excluded PRs: 2024-04-15 11:31:51,028 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-04-15 11:31:51,028 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,028 [ scc.merge] INFO 2024-04-15 11:31:51,028 [ scc.merge] INFO Merged PRs: 2024-04-15 11:31:51,028 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-04-15 11:31:51,028 [ scc.merge] INFO 2024-04-15 11:31:51,028 [ scc.merge] INFO Repository: ome/omero-signup 2024-04-15 11:31:51,028 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,028 [ scc.merge] INFO 2024-04-15 11:31:51,028 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-15 11:31:51,028 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-04-15 11:31:51,028 [ scc.merge] INFO 2024-04-15 11:31:51,028 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-04-15 11:31:51,028 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,028 [ scc.merge] INFO 2024-04-15 11:31:51,028 [ scc.merge] INFO Merged PRs: 2024-04-15 11:31:51,028 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-04-15 11:31:51,028 [ scc.merge] INFO 2024-04-15 11:31:51,028 [ scc.merge] INFO Repository: ome/omero-upload 2024-04-15 11:31:51,029 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,029 [ scc.merge] INFO 2024-04-15 11:31:51,029 [ scc.merge] INFO 2024-04-15 11:31:51,029 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-04-15 11:31:51,029 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,029 [ scc.merge] INFO 2024-04-15 11:31:51,029 [ scc.merge] INFO 2024-04-15 11:31:51,029 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-04-15 11:31:51,029 [ scc.merge] INFO Excluded PRs: 2024-04-15 11:31:51,029 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-04-15 11:31:51,029 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,029 [ scc.merge] INFO 2024-04-15 11:31:51,029 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-15 11:31:51,029 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-04-15 11:31:51,029 [ scc.merge] INFO 2024-04-15 11:31:51,029 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-04-15 11:31:51,029 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,029 [ scc.merge] INFO 2024-04-15 11:31:51,029 [ scc.merge] INFO 2024-04-15 11:31:51,029 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-04-15 11:31:51,029 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,029 [ scc.merge] INFO 2024-04-15 11:31:51,029 [ scc.merge] INFO 2024-04-15 11:31:51,029 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-04-15 11:31:51,029 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,029 [ scc.merge] INFO 2024-04-15 11:31:51,029 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-15 11:31:51,029 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-04-15 11:31:51,029 [ scc.merge] INFO 2024-04-15 11:31:51,029 [ scc.merge] INFO Repository: ome/scripts 2024-04-15 11:31:51,029 [ scc.merge] INFO Excluded PRs: 2024-04-15 11:31:51,029 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-04-15 11:31:51,029 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-04-15 11:31:51,029 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-04-15 11:31:51,029 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-04-15 11:31:51,029 [ scc.merge] INFO Already up to date. 2024-04-15 11:31:51,029 [ scc.merge] INFO 2024-04-15 11:31:51,029 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-15 11:31:51,030 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-04-15 11:31:51,030 [ scc.merge] INFO 2024-04-15 11:31:51,030 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-04-15 11:31:51,030 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,036 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-15 11:31:51,036 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-15 11:31:51,043 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-15 11:31:51,048 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-15 11:31:51,054 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-15 11:31:51,059 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-15 11:31:51,065 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-15 11:31:51,071 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-15 11:31:51,076 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-15 11:31:51,080 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-15 11:31:51,085 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-15 11:31:51,090 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-15 11:31:51,096 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-15 11:31:51,103 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,108 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-15 11:31:51,109 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-15 11:31:51,113 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-15 11:31:51,118 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,123 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,123 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-15 11:31:51,123 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-15 11:31:51,127 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-15 11:31:51,132 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,136 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,136 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-15 11:31:51,136 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,141 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,141 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-15 11:31:51,141 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,146 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-15 11:31:51,146 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-15 11:31:51,146 [ scc.git] DEBUG Calling 'git remote' 2024-04-15 11:31:51,152 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.8.2 to 5.9.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 1b2c27a] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from ded0caab nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 9d8d147 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from a0148a6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 2078ac7 nothing to commit, working tree clean [detached HEAD 8c46a00] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-15 11:32:40,256 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-15 11:32:49,435 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-15 11:32:52,851 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-15 11:32:57,501 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-15 11:33:45,026 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS