Started by upstream project "Trigger" build number 44 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 6e8d6c02735d91d63282abf7000916273d6c54c1 (refs/remotes/origin/master) Commit message: "Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147" > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 6e8d6c02735d91d63282abf7000916273d6c54c1 # timeout=10 > git rev-list --no-walk 6e8d6c02735d91d63282abf7000916273d6c54c1 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 38 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.11.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.31.0-py3-none-any.whl (62 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.11.0-py3-none-any.whl (34 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl (4.6 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.5 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.11.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-04-19 08:27:58,995 [ scc.config] DEBUG Found github.token 2024-04-19 08:27:58,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-04-19 08:27:59,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:27:59,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:28:00,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-04-19 08:28:00,046 [ scc.gh] DEBUG 3945 remaining from 5000 (Reset at 08:04 2024-04-19 08:28:00,047 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:00,052 [ scc.git] DEBUG Check current status 2024-04-19 08:28:00,052 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:00,056 [ scc.git] DEBUG 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-04-19 08:28:00,056 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:00,107 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-19 08:28:00,110 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-19 08:28:00,113 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-19 08:28:00,116 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-19 08:28:00,157 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-19 08:28:00,160 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-19 08:28:00,163 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-19 08:28:00,227 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-19 08:28:00,230 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-19 08:28:00,233 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-19 08:28:00,235 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-19 08:28:00,238 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-19 08:28:00,241 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-19 08:28:00,244 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-19 08:28:00,247 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-19 08:28:00,249 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-19 08:28:00,252 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-19 08:28:00,254 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-19 08:28:00,256 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-19 08:28:00,259 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-19 08:28:00,262 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-19 08:28:00,265 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-19 08:28:00,270 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:00,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-04-19 08:28:00,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:01,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:01,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:02,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:02,234 [ scc.git] DEBUG Resetting... 2024-04-19 08:28:02,235 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-04-19 08:28:02,244 [ scc.git] DEBUG HEAD is now at 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-04-19 08:28:02,244 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-04-19 08:28:02,349 [ scc.git] DEBUG Check current status 2024-04-19 08:28:02,349 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:02,353 [ scc.git] DEBUG 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-04-19 08:28:02,353 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:02,395 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-19 08:28:02,398 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-19 08:28:02,400 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-19 08:28:02,403 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-19 08:28:02,406 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-19 08:28:02,408 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-19 08:28:02,411 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-19 08:28:02,414 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-19 08:28:02,417 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-19 08:28:02,420 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-19 08:28:02,422 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-19 08:28:02,425 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-19 08:28:02,428 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-19 08:28:02,430 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-19 08:28:02,433 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-19 08:28:02,436 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-19 08:28:02,438 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-19 08:28:02,440 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-19 08:28:02,443 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-19 08:28:02,445 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-19 08:28:02,448 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-19 08:28:02,451 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-19 08:28:02,452 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-04-19 08:28:02,452 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-04-19 08:28:02,452 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-04-19 08:28:02,452 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-04-19 08:28:02,452 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-04-19 08:28:02,452 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:28:02,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-04-19 08:28:03,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/362 HTTP/1.1" 200 None 2024-04-19 08:28:03,244 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-19 08:28:03,244 [ scc.repo] DEBUG - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' 2024-04-19 08:28:03,244 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:28:03,244 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:28:03,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:28:03,249 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:28:03,253 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:28:03,253 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:28:03,258 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:28:03,262 [ scc.git] DEBUG Already up to date. 2024-04-19 08:28:03,263 [ scc.git] DEBUG Calling 'git fetch origin pull/362/head' 2024-04-19 08:28:03,670 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-04-19 08:28:03,670 [ scc.git] DEBUG * branch refs/pull/362/head -> FETCH_HEAD 2024-04-19 08:28:03,676 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:28:03,676 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:28:03,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:28:03,681 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...524550bfd9133bd44c5f72ed00e9561bfbe2ebe5' 2024-04-19 08:28:03,686 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:28:03,691 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 362 (Bump scripts from `2078ac7` to `5a90893`) 524550bfd9133bd44c5f72ed00e9561bfbe2ebe5' 2024-04-19 08:28:03,707 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:28:03,710 [ scc.git] DEBUG scripts | 2 +- 2024-04-19 08:28:03,710 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-04-19 08:28:03,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:28:03,870 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:28:03,938 [ scc.git] DEBUG Submodule path 'scripts': checked out '5a908933161233015332dd416c325c60c5b8bd3a' 2024-04-19 08:28:03,939 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:28:03,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:28:03,943 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:28:04,483 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fec1bb21460> has no local changes 2024-04-19 08:28:04,483 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:28:04,551 [ scc.git] DEBUG [detached HEAD 546874e] merge master -Dorg -Snone 2024-04-19 08:28:04,552 [ scc.merge] INFO Repository: ome/omero-plugins 2024-04-19 08:28:04,552 [ scc.merge] INFO Already up to date. 2024-04-19 08:28:04,552 [ scc.merge] INFO 2024-04-19 08:28:04,552 [ scc.merge] INFO Merged PRs: 2024-04-19 08:28:04,552 [ scc.merge] INFO - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' 2024-04-19 08:28:04,552 [ scc.merge] INFO 2024-04-19 08:28:04,552 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-04-19 08:28:04,552 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-04-19 08:28:13,796 [ scc.config] DEBUG Found github.token 2024-04-19 08:28:13,799 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-04-19 08:28:14,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:28:14,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:28:14,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-04-19 08:28:14,840 [ scc.gh] DEBUG 3935 remaining from 5000 (Reset at 08:04 2024-04-19 08:28:14,840 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:14,845 [ scc.git] DEBUG Check current status 2024-04-19 08:28:14,845 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:14,849 [ scc.git] DEBUG 546874e merge master -Dorg -Snone 2024-04-19 08:28:14,849 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:14,894 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-19 08:28:14,897 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-19 08:28:14,900 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-19 08:28:14,903 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-19 08:28:14,906 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-19 08:28:14,908 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-19 08:28:14,911 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-19 08:28:14,914 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-19 08:28:14,917 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-19 08:28:14,920 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-19 08:28:14,923 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-19 08:28:14,926 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-19 08:28:14,929 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-19 08:28:14,931 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-19 08:28:14,934 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-19 08:28:14,937 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-19 08:28:14,939 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-19 08:28:14,942 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-19 08:28:14,944 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-19 08:28:14,947 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-19 08:28:14,950 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-19 08:28:14,953 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-04-19 08:28:14,957 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:14,958 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-04-19 08:28:14,959 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-04-19 08:28:15,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-04-19 08:28:15,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:16,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:16,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:17,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:17,050 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:17,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-19 08:28:17,118 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:17,122 [ scc.git] DEBUG Check current status 2024-04-19 08:28:17,122 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:17,125 [ scc.git] DEBUG c9c839c Merge pull request #64 from jburel/gateway_5_8_2 2024-04-19 08:28:17,126 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:17,167 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:17,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-04-19 08:28:17,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:18,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:18,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:19,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:19,263 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:19,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:19,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-19 08:28:19,300 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:19,303 [ scc.git] DEBUG Check current status 2024-04-19 08:28:19,304 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:19,307 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-04-19 08:28:19,307 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:19,348 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:19,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-04-19 08:28:20,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:20,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:21,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:21,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:21,490 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:21,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:21,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-19 08:28:21,529 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:21,533 [ scc.git] DEBUG Check current status 2024-04-19 08:28:21,533 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:21,537 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-04-19 08:28:21,537 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:21,582 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:21,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-04-19 08:28:22,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:22,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:23,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:23,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:23,728 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:23,767 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:23,768 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-19 08:28:23,768 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:23,773 [ scc.git] DEBUG Check current status 2024-04-19 08:28:23,773 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:23,777 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-19 08:28:23,777 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:23,817 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:24,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-04-19 08:28:24,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:25,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:25,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:25,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:26,003 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:26,056 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:26,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-19 08:28:26,058 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:26,062 [ scc.git] DEBUG Check current status 2024-04-19 08:28:26,063 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:26,067 [ scc.git] DEBUG ded0caab Merge pull request #548 from will-moore/fix_label_cropping_in_tiff_export 2024-04-19 08:28:26,068 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:26,110 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:26,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-04-19 08:28:26,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:27,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:27,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:28,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:28,192 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:28,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:28,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-19 08:28:28,238 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:28,248 [ scc.git] DEBUG Check current status 2024-04-19 08:28:28,250 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:28,256 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-04-19 08:28:28,257 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:28,301 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:28,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-04-19 08:28:29,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:29,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:29,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:30,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:30,396 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:30,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:30,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-19 08:28:30,434 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:30,439 [ scc.git] DEBUG Check current status 2024-04-19 08:28:30,439 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:30,443 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-04-19 08:28:30,443 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:30,482 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:30,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-04-19 08:28:31,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:31,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:32,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:32,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:32,614 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:32,657 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:32,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-19 08:28:32,658 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:32,663 [ scc.git] DEBUG Check current status 2024-04-19 08:28:32,663 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:32,668 [ scc.git] DEBUG 9d8d147 Merge pull request #468 from ome/dependabot/npm_and_yarn/express-4.19.2 2024-04-19 08:28:32,668 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:32,712 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:33,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-04-19 08:28:33,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:33,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:34,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:34,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:34,813 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:34,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:34,858 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-19 08:28:34,858 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:34,863 [ scc.git] DEBUG Check current status 2024-04-19 08:28:34,863 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:34,868 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-04-19 08:28:34,868 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:34,916 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:35,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-04-19 08:28:35,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:36,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:36,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:37,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:37,093 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:37,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:37,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-19 08:28:37,136 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:37,143 [ scc.git] DEBUG Check current status 2024-04-19 08:28:37,143 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:37,150 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-19 08:28:37,151 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:37,197 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:37,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-04-19 08:28:38,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:38,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:38,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:39,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:39,268 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:39,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:39,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-19 08:28:39,312 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:39,318 [ scc.git] DEBUG Check current status 2024-04-19 08:28:39,318 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:39,323 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-04-19 08:28:39,323 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:39,367 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:39,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-04-19 08:28:40,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:40,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:41,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:41,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:41,510 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:41,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:41,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-19 08:28:41,555 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:41,560 [ scc.git] DEBUG Check current status 2024-04-19 08:28:41,561 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:41,566 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-04-19 08:28:41,566 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:41,617 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:41,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-04-19 08:28:42,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:42,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:43,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:43,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:43,701 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:43,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:43,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-19 08:28:43,747 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:43,753 [ scc.git] DEBUG Check current status 2024-04-19 08:28:43,754 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:43,759 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-04-19 08:28:43,759 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:43,811 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:44,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-04-19 08:28:44,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:45,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:45,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:46,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:46,250 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:46,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:46,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-19 08:28:46,293 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:46,299 [ scc.git] DEBUG Check current status 2024-04-19 08:28:46,299 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:46,304 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-04-19 08:28:46,304 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:46,349 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:46,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-04-19 08:28:47,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:47,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:48,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:48,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:48,434 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:48,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:48,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-19 08:28:48,482 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:48,488 [ scc.git] DEBUG Check current status 2024-04-19 08:28:48,488 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:48,494 [ scc.git] DEBUG a0148a6 Merge pull request #68 from sbesson/pytest 2024-04-19 08:28:48,494 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:48,547 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:48,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-19 08:28:48,877 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-19 08:28:49,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-04-19 08:28:49,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:50,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:50,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:50,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:50,842 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:50,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:50,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-19 08:28:50,888 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:50,894 [ scc.git] DEBUG Check current status 2024-04-19 08:28:50,895 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:50,899 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-04-19 08:28:50,900 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:50,946 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:51,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-04-19 08:28:51,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:52,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:52,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:53,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:53,032 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:53,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:53,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-19 08:28:53,076 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:53,081 [ scc.git] DEBUG Check current status 2024-04-19 08:28:53,082 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:53,087 [ scc.git] DEBUG deab817 update setup-python to v4 2024-04-19 08:28:53,087 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:53,133 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:53,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-04-19 08:28:54,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:54,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:54,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:55,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:55,269 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:55,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:55,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-19 08:28:55,312 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:55,318 [ scc.git] DEBUG Check current status 2024-04-19 08:28:55,318 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:55,323 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-04-19 08:28:55,323 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:55,367 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:55,368 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-04-19 08:28:55,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-04-19 08:28:56,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:56,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:57,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:57,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:57,511 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:28:57,561 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:28:57,562 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-19 08:28:57,562 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:28:57,571 [ scc.git] DEBUG Check current status 2024-04-19 08:28:57,571 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:28:57,578 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-04-19 08:28:57,579 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:28:57,645 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:28:57,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-19 08:28:57,946 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-19 08:28:58,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-04-19 08:28:58,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:28:59,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:28:59,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:28:59,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:28:59,965 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:29:00,005 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:29:00,006 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-19 08:29:00,006 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:29:00,011 [ scc.git] DEBUG Check current status 2024-04-19 08:29:00,011 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:29:00,017 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-04-19 08:29:00,017 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:29:00,063 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:29:00,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-19 08:29:00,393 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-19 08:29:00,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-04-19 08:29:01,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:29:01,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:29:01,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:29:02,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:29:02,372 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:29:02,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:29:02,414 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-19 08:29:02,414 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:29:02,420 [ scc.git] DEBUG Check current status 2024-04-19 08:29:02,420 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:29:02,426 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-04-19 08:29:02,426 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:29:02,472 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:29:02,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-04-19 08:29:03,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:29:03,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:29:04,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:29:04,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:29:04,624 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:29:04,673 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:29:04,674 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-19 08:29:04,674 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-19 08:29:04,679 [ scc.git] DEBUG Check current status 2024-04-19 08:29:04,680 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:29:04,684 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-04-19 08:29:04,685 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:29:04,731 [ scc.config] DEBUG Found remote.origin.url 2024-04-19 08:29:04,732 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-04-19 08:29:05,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-19 08:29:05,048 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-19 08:29:05,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-04-19 08:29:05,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-19 08:29:06,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-19 08:29:06,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-19 08:29:07,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-19 08:29:07,013 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:29:07,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:29:07,060 [ scc.git] DEBUG Resetting... 2024-04-19 08:29:07,060 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-04-19 08:29:07,071 [ scc.git] DEBUG HEAD is now at 546874e merge master -Dorg -Snone 2024-04-19 08:29:07,071 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-04-19 08:29:07,180 [ scc.git] DEBUG Check current status 2024-04-19 08:29:07,180 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-19 08:29:07,186 [ scc.git] DEBUG 546874e merge master -Dorg -Snone 2024-04-19 08:29:07,187 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-19 08:29:07,236 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-19 08:29:07,239 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-19 08:29:07,242 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-19 08:29:07,245 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-19 08:29:07,249 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-19 08:29:07,252 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-19 08:29:07,254 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-19 08:29:07,258 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-19 08:29:07,262 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-19 08:29:07,265 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-19 08:29:07,268 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-19 08:29:07,271 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-19 08:29:07,274 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-19 08:29:07,277 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-19 08:29:07,280 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-19 08:29:07,283 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-19 08:29:07,285 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-19 08:29:07,288 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-19 08:29:07,291 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-19 08:29:07,294 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-19 08:29:07,297 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-19 08:29:07,301 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-04-19 08:29:07,302 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-04-19 08:29:07,303 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-04-19 08:29:07,303 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-04-19 08:29:07,303 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-04-19 08:29:07,303 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-04-19 08:29:07,303 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-04-19 08:29:07,303 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:29:07,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-04-19 08:29:08,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/362 HTTP/1.1" 200 None 2024-04-19 08:29:08,013 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-19 08:29:08,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/524550bfd9133bd44c5f72ed00e9561bfbe2ebe5 HTTP/1.1" 200 None 2024-04-19 08:29:08,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/524550bfd9133bd44c5f72ed00e9561bfbe2ebe5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:29:09,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/524550bfd9133bd44c5f72ed00e9561bfbe2ebe5 HTTP/1.1" 200 None 2024-04-19 08:29:09,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/524550bfd9133bd44c5f72ed00e9561bfbe2ebe5?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:29:09,912 [ scc.repo] DEBUG - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' 2024-04-19 08:29:09,912 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:29:09,913 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:09,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:09,919 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:29:09,925 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:29:09,925 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:29:09,931 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:29:09,938 [ scc.git] DEBUG Already up to date. 2024-04-19 08:29:09,938 [ scc.git] DEBUG Calling 'git fetch origin pull/362/head' 2024-04-19 08:29:10,388 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-04-19 08:29:10,388 [ scc.git] DEBUG * branch refs/pull/362/head -> FETCH_HEAD 2024-04-19 08:29:10,393 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:29:10,393 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:10,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:10,400 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...524550bfd9133bd44c5f72ed00e9561bfbe2ebe5' 2024-04-19 08:29:10,406 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:10,414 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 362 (Bump scripts from `2078ac7` to `5a90893`) 524550bfd9133bd44c5f72ed00e9561bfbe2ebe5' 2024-04-19 08:29:10,421 [ scc.git] DEBUG Already up to date. 2024-04-19 08:29:10,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:29:10,573 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:29:10,627 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:10,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:10,633 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:29:11,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-04-19 08:29:11,010 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:29:11,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-19 08:29:11,010 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:11,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:11,016 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:29:11,022 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:29:11,022 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:29:11,028 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:29:11,034 [ scc.git] DEBUG Already up to date. 2024-04-19 08:29:11,034 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:29:11,034 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:11,035 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:11,041 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:29:11,083 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:11,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:11,089 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:29:11,129 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:29:11,137 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18afd99fd0> has no local changes 2024-04-19 08:29:11,138 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:29:11,152 [ scc.git] DEBUG [detached HEAD 8371bf0] merge master -Dorg -Ssuccess-only 2024-04-19 08:29:11,153 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:29:11,153 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:29:11,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-04-19 08:29:12,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-04-19 08:29:12,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-04-19 08:29:13,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-04-19 08:29:13,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:29:14,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-19 08:29:14,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-04-19 08:29:15,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:29:15,115 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-04-19 08:29:15,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-04-19 08:29:16,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-04-19 08:29:16,144 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:29:16,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-19 08:29:16,145 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:16,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:16,151 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:29:16,156 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:29:16,156 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:29:16,161 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:29:16,167 [ scc.git] DEBUG Already up to date. 2024-04-19 08:29:16,168 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-04-19 08:29:16,626 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-04-19 08:29:16,626 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-04-19 08:29:16,632 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:29:16,632 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:16,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:16,637 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-04-19 08:29:16,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:16,647 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-04-19 08:29:16,655 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:29:16,657 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-04-19 08:29:16,657 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-04-19 08:29:16,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:29:16,829 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:29:16,867 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:16,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:16,872 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:29:16,910 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:29:16,916 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18afdc70d0> has no local changes 2024-04-19 08:29:16,916 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:29:16,924 [ scc.git] DEBUG [detached HEAD fc2ff6b] merge master -Dorg -Ssuccess-only 2024-04-19 08:29:16,925 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:29:16,925 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:29:17,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-04-19 08:29:17,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-04-19 08:29:18,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-04-19 08:29:18,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-04-19 08:29:19,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-04-19 08:29:19,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-04-19 08:29:20,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:29:20,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-04-19 08:29:21,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:29:21,289 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-04-19 08:29:21,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-04-19 08:29:22,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-04-19 08:29:22,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-04-19 08:29:23,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-04-19 08:29:23,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-04-19 08:29:23,632 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:29:23,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-19 08:29:23,632 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:23,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:23,643 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:29:23,655 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:29:23,655 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:29:23,668 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:29:23,681 [ scc.git] DEBUG Already up to date. 2024-04-19 08:29:23,682 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-04-19 08:29:24,169 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-04-19 08:29:24,170 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-04-19 08:29:24,179 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:29:24,179 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:24,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:24,191 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-04-19 08:29:24,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:24,206 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-04-19 08:29:24,217 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:29:24,220 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-04-19 08:29:24,220 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-04-19 08:29:24,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:29:24,382 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:29:24,428 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:24,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:24,436 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:29:24,487 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:29:24,497 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18aeceff40> has no local changes 2024-04-19 08:29:24,497 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:29:24,510 [ scc.git] DEBUG [detached HEAD ef248cd] merge master -Dorg -Ssuccess-only 2024-04-19 08:29:24,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:29:24,510 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:29:24,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-04-19 08:29:25,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-04-19 08:29:25,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-04-19 08:29:26,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-04-19 08:29:26,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-19 08:29:27,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:29:27,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-19 08:29:28,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-19 08:29:28,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-04-19 08:29:29,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-19 08:29:29,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-04-19 08:29:29,701 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-04-19 08:29:30,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-04-19 08:29:30,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-04-19 08:29:31,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-04-19 08:29:31,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-04-19 08:29:32,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:29:32,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-04-19 08:29:33,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:29:33,192 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-04-19 08:29:33,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-04-19 08:29:34,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-04-19 08:29:34,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-04-19 08:29:35,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-04-19 08:29:35,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:29:36,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-04-19 08:29:36,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:29:36,600 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-04-19 08:29:36,600 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:29:36,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-19 08:29:36,601 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:36,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:36,634 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:29:36,643 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:29:36,643 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:29:36,652 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:29:36,662 [ scc.git] DEBUG Already up to date. 2024-04-19 08:29:36,663 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-04-19 08:29:37,109 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-19 08:29:37,110 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-04-19 08:29:37,116 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-04-19 08:29:37,661 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-19 08:29:37,661 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-04-19 08:29:37,670 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-04-19 08:29:38,162 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-19 08:29:38,162 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-04-19 08:29:38,169 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:29:38,169 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:38,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:38,179 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-19 08:29:38,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:38,198 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-19 08:29:38,287 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-04-19 08:29:38,288 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-19 08:29:38,288 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-04-19 08:29:38,288 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-19 08:29:38,289 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-19 08:29:38,299 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-19 08:29:38,309 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-19 08:29:38,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:29:38,478 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-19 08:29:38,490 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-19 08:29:38,501 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-04-19 08:29:38,510 [ scc.config] DEBUG Found github.token 2024-04-19 08:29:38,511 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-04-19 08:29:38,511 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-19 08:29:38,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:38,534 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-19 08:29:38,580 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-04-19 08:29:38,580 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-04-19 08:29:38,580 [ scc.git] DEBUG Auto-merging setup.py 2024-04-19 08:29:38,580 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-04-19 08:29:38,580 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-19 08:29:38,580 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-04-19 08:29:38,580 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-04-19 08:29:38,580 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-19 08:29:38,581 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-19 08:29:38,591 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-19 08:29:38,602 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-19 08:29:38,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:29:38,890 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-19 08:29:38,903 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-19 08:29:38,913 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-04-19 08:29:38,921 [ scc.config] DEBUG Found github.token 2024-04-19 08:29:38,922 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-04-19 08:29:38,922 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-04-19 08:29:38,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:38,940 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-04-19 08:29:38,959 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-04-19 08:29:38,959 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-19 08:29:38,960 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:29:38,965 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-04-19 08:29:38,965 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-04-19 08:29:38,965 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-04-19 08:29:38,965 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-04-19 08:29:38,965 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-04-19 08:29:38,965 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-04-19 08:29:39,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:29:39,301 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:29:39,380 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:39,380 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:39,389 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:29:39,457 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:29:39,469 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18aeca7640> has no local changes 2024-04-19 08:29:39,470 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:29:39,484 [ scc.git] DEBUG [detached HEAD 4f1b85d] merge master -Dorg -Ssuccess-only 2024-04-19 08:29:39,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:29:39,486 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:29:39,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-04-19 08:29:40,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-04-19 08:29:40,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543 HTTP/1.1" 200 None 2024-04-19 08:29:41,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543/comments HTTP/1.1" 200 None 2024-04-19 08:29:41,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/477 HTTP/1.1" 200 None 2024-04-19 08:29:42,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/477/comments HTTP/1.1" 200 None 2024-04-19 08:29:42,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29 HTTP/1.1" 200 None 2024-04-19 08:29:43,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:29:43,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-19 08:29:44,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29 HTTP/1.1" 200 None 2024-04-19 08:29:44,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8e01878cc2be8a9762cc842f970adbdfabdfdb29?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:29:44,619 [ scc.repo] DEBUG - PR 477 will-moore 'Vite' 2024-04-19 08:29:44,619 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:29:44,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-19 08:29:44,619 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:44,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:44,627 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:29:44,636 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:29:44,637 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:29:44,646 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:29:44,655 [ scc.git] DEBUG Already up to date. 2024-04-19 08:29:44,655 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-04-19 08:29:45,081 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-04-19 08:29:45,081 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-04-19 08:29:45,086 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:29:45,086 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:45,086 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:45,093 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8e01878cc2be8a9762cc842f970adbdfabdfdb29' 2024-04-19 08:29:45,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:45,125 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Vite) 8e01878cc2be8a9762cc842f970adbdfabdfdb29' 2024-04-19 08:29:45,157 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-04-19 08:29:45,157 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:29:45,202 [ scc.git] DEBUG .bumpversion.cfg | 1 + 2024-04-19 08:29:45,202 [ scc.git] DEBUG .gitignore | 5 +- 2024-04-19 08:29:45,202 [ scc.git] DEBUG Dockerfile | 15 - 2024-04-19 08:29:45,202 [ scc.git] DEBUG Gruntfile.js | 177 - 2024-04-19 08:29:45,202 [ scc.git] DEBUG README.rst | 58 +- 2024-04-19 08:29:45,202 [ scc.git] DEBUG deploy_build.sh | 12 + 2024-04-19 08:29:45,202 [ scc.git] DEBUG docs/demo/index.html | 940 --- 2024-04-19 08:29:45,202 [ scc.git] DEBUG .../static/figure/3rdparty/backbone-1.0.0.js | 1571 ---- 2024-04-19 08:29:45,202 [ scc.git] DEBUG .../figure/3rdparty/backbone.mousetrap/README.md | 28 - 2024-04-19 08:29:45,202 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/css/bootstrap.css | 6805 ---------------- 2024-04-19 08:29:45,203 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/css/bootstrap.min.css | 9 - 2024-04-19 08:29:45,203 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.eot | Bin 14079 -> 0 bytes 2024-04-19 08:29:45,203 [ 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...orm_template.html => labels_form.template.html} | 2 +- 2024-04-19 08:29:45,208 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 172 + 2024-04-19 08:29:45,208 [ scc.git] DEBUG src/templates/labels_form_inner_template.html | 173 - 2024-04-19 08:29:45,208 [ scc.git] DEBUG .../{lut_picker.html => lut_picker.template.html} | 6 +- 2024-04-19 08:29:45,208 [ scc.git] DEBUG ...modal_roi.html => crop_modal_roi.template.html} | 0 2024-04-19 08:29:45,208 [ scc.git] DEBUG ...mplate.html => paper_setup_modal.template.html} | 103 +- 2024-04-19 08:29:45,208 [ scc.git] DEBUG ...mplate.html => preview_id_change.template.html} | 54 +- 2024-04-19 08:29:45,208 [ scc.git] DEBUG ..._modal_roi.html => roi_modal_roi.template.html} | 4 +- 2024-04-19 08:29:45,208 [ scc.git] DEBUG ...al_shape.html => roi_modal_shape.template.html} | 0 2024-04-19 08:29:45,208 [ scc.git] DEBUG ...t_buttons.html => roi_zt_buttons.template.html} | 4 +- 2024-04-19 08:29:45,208 [ scc.git] DEBUG 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scc.git] DEBUG vite.config.js | 21 + 2024-04-19 08:29:45,209 [ scc.git] DEBUG 136 files changed, 7924 insertions(+), 32992 deletions(-) 2024-04-19 08:29:45,209 [ scc.git] DEBUG delete mode 100644 Dockerfile 2024-04-19 08:29:45,209 [ scc.git] DEBUG delete mode 100644 Gruntfile.js 2024-04-19 08:29:45,209 [ scc.git] DEBUG create mode 100755 deploy_build.sh 2024-04-19 08:29:45,209 [ scc.git] DEBUG delete mode 100644 docs/demo/index.html 2024-04-19 08:29:45,209 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/backbone-1.0.0.js 2024-04-19 08:29:45,209 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/backbone.mousetrap/README.md 2024-04-19 08:29:45,209 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/css/bootstrap.css 2024-04-19 08:29:45,209 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/css/bootstrap.min.css 2024-04-19 08:29:45,209 [ scc.git] DEBUG delete mode 100755 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{omero_figure/static/figure => src}/images/crop20.png (100%) 2024-04-19 08:29:45,210 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/cursor-icon-16.png (100%) 2024-04-19 08:29:45,210 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/ellipse-icon-16.png (100%) 2024-04-19 08:29:45,210 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/gradient.png (100%) 2024-04-19 08:29:45,210 [ scc.git] DEBUG rename omero_figure/static/figure/3rdparty/bootstrap-colorpicker/img/bootstrap-colorpicker/hue-horizontal.png => src/images/hue.png (100%) 2024-04-19 08:29:45,210 [ scc.git] DEBUG mode change 100755 => 100644 2024-04-19 08:29:45,210 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/line-icon-16.png (100%) 2024-04-19 08:29:45,210 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/luts_10.png (100%) 2024-04-19 08:29:45,210 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/markdown_dark32x20.png (100%) 2024-04-19 08:29:45,210 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/markdown_light32x20.png (100%) 2024-04-19 08:29:45,210 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/polygon-icon-16.png (100%) 2024-04-19 08:29:45,210 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/polyline-icon-16.png (100%) 2024-04-19 08:29:45,210 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/projection20.png (100%) 2024-04-19 08:29:45,210 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/square-outline-icon-16.png (100%) 2024-04-19 08:29:45,210 [ scc.git] DEBUG create mode 100644 src/index.html 2024-04-19 08:29:45,211 [ scc.git] DEBUG delete mode 100644 src/js/app.js 2024-04-19 08:29:45,211 [ scc.git] DEBUG create mode 100644 src/js/main.js 2024-04-19 08:29:45,211 [ scc.git] DEBUG create mode 100644 src/js/shapeEditorTest.js 2024-04-19 08:29:45,211 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/ellipse.js 2024-04-19 08:29:45,211 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/line.js 2024-04-19 08:29:45,211 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/polygon.js 2024-04-19 08:29:45,211 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/rect.js 2024-04-19 08:29:45,211 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/shape_manager.js 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename {omero_figure/static/figure/3rdparty/backbone.mousetrap => src/js/views}/backbone.mousetrap.js (76%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG mode change 100755 => 100644 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename omero_figure/static/figure/3rdparty/ome.csrf.js => src/js/views/util.csrf.js (84%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG create mode 100644 src/js/views/zt_sliders_view.js 2024-04-19 08:29:45,211 [ scc.git] DEBUG create mode 100644 src/scss/styles.scss 2024-04-19 08:29:45,211 [ scc.git] DEBUG create mode 100644 src/shapeEditorTest.html 2024-04-19 08:29:45,211 [ scc.git] DEBUG create mode 100644 src/templates/channel_slider.template.html 2024-04-19 08:29:45,211 [ scc.git] DEBUG delete mode 100644 src/templates/channel_slider_template.html 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename src/templates/{figure_panel_template.html => figure_panel.template.html} (77%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename src/templates/files/{figure_file_item.html => figure_file_item.template.html} (100%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename src/templates/{image_display_options_template.html => image_display_options.template.html} (54%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename src/templates/{info_panel_template.html => info_panel.template.html} (90%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename src/templates/labels/{label_template.html => label.template.html} (100%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename src/templates/labels/{label_right_vertical_template.html => label_right_vertical.template.html} (100%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename src/templates/labels/{label_table_template.html => label_table.template.html} (100%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename src/templates/labels/{label_vertical_template.html => label_vertical.template.html} (100%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename src/templates/{labels_form_template.html => labels_form.template.html} (89%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG create mode 100644 src/templates/labels_form_inner.template.html 2024-04-19 08:29:45,211 [ scc.git] DEBUG delete mode 100644 src/templates/labels_form_inner_template.html 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename src/templates/{lut_picker.html => lut_picker.template.html} (64%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename src/templates/modal_dialogs/{crop_modal_roi.html => crop_modal_roi.template.html} (100%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename src/templates/modal_dialogs/{paper_setup_modal_template.html => paper_setup_modal.template.html} (54%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename src/templates/modal_dialogs/{preview_Id_change_template.html => preview_id_change.template.html} (52%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_roi.html => roi_modal_roi.template.html} (94%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_shape.html => roi_modal_shape.template.html} (100%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_zt_buttons.html => roi_zt_buttons.template.html} (62%) 2024-04-19 08:29:45,211 [ scc.git] DEBUG create mode 100644 src/templates/rois_form.template.html 2024-04-19 08:29:45,212 [ scc.git] DEBUG delete mode 100644 src/templates/rois_form_template.html 2024-04-19 08:29:45,212 [ scc.git] DEBUG create mode 100644 src/templates/scalebar_form.template.html 2024-04-19 08:29:45,212 [ scc.git] DEBUG delete mode 100644 src/templates/scalebar_form_template.html 2024-04-19 08:29:45,212 [ scc.git] DEBUG rename src/templates/{scalebar_panel_template.html => scalebar_panel.template.html} (100%) 2024-04-19 08:29:45,212 [ scc.git] DEBUG rename src/templates/shapes/{shape_toolbar_template.html => shape_toolbar.template.html} (60%) 2024-04-19 08:29:45,212 [ scc.git] DEBUG create mode 100644 src/templates/viewport.template.html 2024-04-19 08:29:45,212 [ scc.git] DEBUG rename src/templates/{viewport_inner_template.html => viewport_inner.template.html} (100%) 2024-04-19 08:29:45,212 [ scc.git] DEBUG delete mode 100644 src/templates/viewport_template.html 2024-04-19 08:29:45,212 [ scc.git] DEBUG rename src/templates/{xywh_panel_template.html => xywh_panel.template.html} (64%) 2024-04-19 08:29:45,212 [ scc.git] DEBUG rename src/templates/{zoom_crop_template.html => zoom_crop.template.html} (54%) 2024-04-19 08:29:45,212 [ scc.git] DEBUG create mode 100644 vite.config.js 2024-04-19 08:29:45,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:29:45,376 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:29:45,423 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:45,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:45,430 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:29:45,473 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:29:45,485 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18aed01be0> has no local changes 2024-04-19 08:29:45,485 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 549 will-moore 'Inset feature' (stage: draft) - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 477 will-moore 'Vite' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:29:45,502 [ scc.git] DEBUG [detached HEAD 38735c91] merge master -Dorg -Ssuccess-only 2024-04-19 08:29:45,502 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:29:45,502 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:29:45,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-04-19 08:29:46,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-04-19 08:29:46,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-04-19 08:29:47,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-04-19 08:29:47,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:29:48,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-04-19 08:29:48,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:29:48,617 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-04-19 08:29:48,617 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:29:48,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-19 08:29:48,617 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:48,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:48,627 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:29:48,637 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:29:48,638 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:29:48,648 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:29:48,658 [ scc.git] DEBUG Already up to date. 2024-04-19 08:29:48,658 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-04-19 08:29:49,120 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-04-19 08:29:49,120 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-04-19 08:29:49,129 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:29:49,129 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:49,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:49,139 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-04-19 08:29:49,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:49,163 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-04-19 08:29:49,185 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-04-19 08:29:49,187 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:29:49,191 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-04-19 08:29:49,191 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-04-19 08:29:49,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:29:49,362 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:29:49,475 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:49,476 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:49,488 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:29:49,594 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:29:49,607 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18aecb8550> has no local changes 2024-04-19 08:29:49,607 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:29:49,626 [ scc.git] DEBUG [detached HEAD 6ab0886] merge master -Dorg -Ssuccess-only 2024-04-19 08:29:49,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:29:49,628 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:29:49,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-04-19 08:29:50,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-04-19 08:29:50,323 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-19 08:29:50,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-04-19 08:29:51,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:29:51,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-19 08:29:52,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-04-19 08:29:52,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:29:52,986 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-04-19 08:29:52,986 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:29:52,986 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-19 08:29:52,986 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:52,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:52,996 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:29:53,004 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:29:53,005 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:29:53,015 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:29:53,027 [ scc.git] DEBUG Already up to date. 2024-04-19 08:29:53,028 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-04-19 08:29:53,451 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-04-19 08:29:53,452 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-04-19 08:29:53,460 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:29:53,461 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:53,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:53,470 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-04-19 08:29:53,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:53,493 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-04-19 08:29:53,512 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:29:53,517 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-04-19 08:29:53,518 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-04-19 08:29:53,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:29:53,684 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:29:53,801 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:29:53,802 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:29:53,810 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:29:53,907 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:29:53,920 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18aecaa9d0> has no local changes 2024-04-19 08:29:53,920 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:29:53,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:29:53,938 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:29:53,942 [ scc.git] DEBUG [detached HEAD 941f909] merge master -Dorg -Ssuccess-only 2024-04-19 08:29:54,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-04-19 08:29:54,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-04-19 08:29:55,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-04-19 08:29:55,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-04-19 08:29:56,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:29:56,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-19 08:29:57,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-04-19 08:29:57,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:29:57,515 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-04-19 08:29:57,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/470 HTTP/1.1" 200 None 2024-04-19 08:29:58,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/470/comments HTTP/1.1" 200 None 2024-04-19 08:29:59,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/44025ed69514a02ecbc5d4655d3da7519ebf9170 HTTP/1.1" 200 None 2024-04-19 08:29:59,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/44025ed69514a02ecbc5d4655d3da7519ebf9170/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:29:59,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/44025ed69514a02ecbc5d4655d3da7519ebf9170/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-19 08:30:00,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/44025ed69514a02ecbc5d4655d3da7519ebf9170 HTTP/1.1" 200 None 2024-04-19 08:30:00,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/44025ed69514a02ecbc5d4655d3da7519ebf9170?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:30:00,897 [ scc.repo] DEBUG - PR 470 will-moore 'Movie playing waits for planes' 2024-04-19 08:30:01,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/469 HTTP/1.1" 200 None 2024-04-19 08:30:01,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe HTTP/1.1" 200 None 2024-04-19 08:30:02,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:30:02,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-19 08:30:03,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe HTTP/1.1" 200 None 2024-04-19 08:30:03,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ca8b5aabef9a5358f93add750f4cbb51c864b7fe?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:30:03,765 [ scc.repo] DEBUG - PR 469 will-moore 'changelog 0.14.0' 2024-04-19 08:30:04,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-04-19 08:30:04,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-04-19 08:30:05,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4 HTTP/1.1" 200 None 2024-04-19 08:30:05,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:30:06,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-19 08:30:06,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4 HTTP/1.1" 200 None 2024-04-19 08:30:07,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/409c3429dd72d05fef895dcca6d133f8340eabf4?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:30:07,175 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-04-19 08:30:07,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-04-19 08:30:08,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-04-19 08:30:08,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-04-19 08:30:09,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:30:09,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-04-19 08:30:09,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:30:09,941 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-04-19 08:30:09,942 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:30:09,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-19 08:30:09,942 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:09,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:09,952 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:30:09,961 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:30:09,961 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:30:09,971 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:30:09,980 [ scc.git] DEBUG Already up to date. 2024-04-19 08:30:09,980 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-04-19 08:30:10,449 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-19 08:30:10,449 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-04-19 08:30:10,455 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-04-19 08:30:11,314 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-19 08:30:11,314 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-04-19 08:30:11,321 [ scc.git] DEBUG Calling 'git fetch origin pull/469/head' 2024-04-19 08:30:11,724 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-19 08:30:11,724 [ scc.git] DEBUG * branch refs/pull/469/head -> FETCH_HEAD 2024-04-19 08:30:11,730 [ scc.git] DEBUG Calling 'git fetch origin pull/470/head' 2024-04-19 08:30:12,442 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-19 08:30:12,442 [ scc.git] DEBUG * branch refs/pull/470/head -> FETCH_HEAD 2024-04-19 08:30:12,447 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-04-19 08:30:13,010 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-19 08:30:13,010 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-04-19 08:30:13,013 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:30:13,013 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:13,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:13,019 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-04-19 08:30:13,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:13,032 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-04-19 08:30:13,052 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:30:13,055 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-04-19 08:30:13,055 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-04-19 08:30:13,055 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-04-19 08:30:13,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:30:13,219 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...409c3429dd72d05fef895dcca6d133f8340eabf4' 2024-04-19 08:30:13,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:13,231 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 409c3429dd72d05fef895dcca6d133f8340eabf4' 2024-04-19 08:30:13,276 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:30:13,282 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-04-19 08:30:13,282 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-04-19 08:30:13,282 [ scc.git] DEBUG src/app/header.html | 5 + 2024-04-19 08:30:13,282 [ scc.git] DEBUG src/app/header.js | 46 ++++++++- 2024-04-19 08:30:13,282 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-04-19 08:30:13,282 [ scc.git] DEBUG src/utils/figure.js | 220 ++++++++++++++++++++++++++++++++++++++++++ 2024-04-19 08:30:13,282 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 1 - 2024-04-19 08:30:13,282 [ scc.git] DEBUG 7 files changed, 294 insertions(+), 7 deletions(-) 2024-04-19 08:30:13,282 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-04-19 08:30:13,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:30:13,620 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ca8b5aabef9a5358f93add750f4cbb51c864b7fe' 2024-04-19 08:30:13,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:13,634 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 469 (changelog 0.14.0) ca8b5aabef9a5358f93add750f4cbb51c864b7fe' 2024-04-19 08:30:13,658 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:30:13,660 [ scc.git] DEBUG CHANGELOG.md | 9 ++++++++- 2024-04-19 08:30:13,660 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-04-19 08:30:14,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:30:14,036 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...44025ed69514a02ecbc5d4655d3da7519ebf9170' 2024-04-19 08:30:14,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:14,049 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 470 (Movie playing waits for planes) 44025ed69514a02ecbc5d4655d3da7519ebf9170' 2024-04-19 08:30:14,067 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-04-19 08:30:14,068 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:30:14,074 [ scc.git] DEBUG css/app.css | 22 +++++ 2024-04-19 08:30:14,074 [ scc.git] DEBUG src/events/events.js | 4 + 2024-04-19 08:30:14,074 [ scc.git] DEBUG src/index-dev.html | 6 +- 2024-04-19 08:30:14,074 [ scc.git] DEBUG src/viewers/ol3-viewer.html | 2 +- 2024-04-19 08:30:14,074 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 160 ++++++++++++++++++++++++------------- 2024-04-19 08:30:14,074 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 42 +++++++++- 2024-04-19 08:30:14,074 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 15 +++- 2024-04-19 08:30:14,074 [ scc.git] DEBUG 7 files changed, 190 insertions(+), 61 deletions(-) 2024-04-19 08:30:14,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:30:14,449 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-04-19 08:30:14,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:14,462 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-04-19 08:30:14,476 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:30:14,479 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-04-19 08:30:14,479 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-04-19 08:30:14,479 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-04-19 08:30:14,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:30:14,856 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:30:14,901 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:14,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:14,908 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:30:14,958 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:30:14,968 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18aec915b0> has no local changes 2024-04-19 08:30:14,969 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 469 will-moore 'changelog 0.14.0' - PR 470 will-moore 'Movie playing waits for planes' - PR 471 will-moore 'Z projection disabled tooltip' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:30:14,982 [ scc.git] DEBUG [detached HEAD 887fdd7] merge master -Dorg -Ssuccess-only 2024-04-19 08:30:14,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:30:14,983 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:30:15,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-04-19 08:30:15,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-04-19 08:30:16,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-04-19 08:30:16,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-04-19 08:30:17,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:30:17,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-19 08:30:18,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-04-19 08:30:18,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:30:18,805 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-04-19 08:30:18,805 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:30:18,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-19 08:30:18,805 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:18,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:18,816 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:30:18,824 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:30:18,825 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:30:18,832 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:30:18,838 [ scc.git] DEBUG Already up to date. 2024-04-19 08:30:18,838 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-04-19 08:30:19,227 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-04-19 08:30:19,227 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-04-19 08:30:19,232 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:30:19,232 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:19,232 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:19,238 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-04-19 08:30:19,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:19,252 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-04-19 08:30:19,264 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:30:19,267 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-04-19 08:30:19,267 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-04-19 08:30:19,267 [ scc.git] DEBUG requirements.txt | 2 +- 2024-04-19 08:30:19,267 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-04-19 08:30:19,267 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-04-19 08:30:19,268 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-04-19 08:30:19,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:30:19,449 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:30:19,491 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:19,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:19,498 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:30:19,540 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:30:19,548 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18aecbb4f0> has no local changes 2024-04-19 08:30:19,548 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:30:19,557 [ scc.git] DEBUG [detached HEAD c2cda5c] merge master -Dorg -Ssuccess-only 2024-04-19 08:30:19,557 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:30:19,558 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:30:20,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-04-19 08:30:20,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-04-19 08:30:21,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-04-19 08:30:21,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-04-19 08:30:22,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:30:22,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-04-19 08:30:23,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:30:23,036 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-04-19 08:30:23,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-04-19 08:30:24,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-04-19 08:30:24,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-04-19 08:30:24,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:30:25,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-04-19 08:30:25,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:30:25,909 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-04-19 08:30:25,909 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:30:25,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-19 08:30:25,909 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:25,910 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:25,917 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:30:25,925 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:30:25,925 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:30:25,934 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:30:25,942 [ scc.git] DEBUG Already up to date. 2024-04-19 08:30:25,943 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-04-19 08:30:26,603 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-04-19 08:30:26,603 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-04-19 08:30:26,610 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-04-19 08:30:27,351 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-04-19 08:30:27,352 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-04-19 08:30:27,356 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:30:27,356 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:27,356 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:27,362 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-19 08:30:27,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:27,380 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-19 08:30:27,508 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-04-19 08:30:27,508 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-04-19 08:30:27,508 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-04-19 08:30:27,508 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-04-19 08:30:27,508 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-19 08:30:27,509 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-19 08:30:27,516 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-19 08:30:27,523 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-19 08:30:27,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:30:27,709 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-19 08:30:27,717 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-19 08:30:27,724 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-04-19 08:30:27,730 [ scc.config] DEBUG Found github.token 2024-04-19 08:30:27,730 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-04-19 08:30:27,730 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-19 08:30:27,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:27,743 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-19 08:30:27,779 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-04-19 08:30:27,779 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-04-19 08:30:27,779 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-04-19 08:30:27,779 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-19 08:30:27,779 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-19 08:30:27,787 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-19 08:30:27,796 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-19 08:30:28,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:30:28,141 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-19 08:30:28,149 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-19 08:30:28,154 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-04-19 08:30:28,159 [ scc.config] DEBUG Found github.token 2024-04-19 08:30:28,160 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-04-19 08:30:28,160 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:30:28,201 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:28,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:28,208 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:30:28,249 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:30:28,257 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18aec91550> has no local changes 2024-04-19 08:30:28,257 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:30:28,267 [ scc.git] DEBUG [detached HEAD 057f476] merge master -Dorg -Ssuccess-only 2024-04-19 08:30:28,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:30:28,267 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:30:28,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-04-19 08:30:29,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-04-19 08:30:29,161 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-19 08:30:29,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-04-19 08:30:30,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:30:30,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-19 08:30:31,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-04-19 08:30:31,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:30:31,762 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-04-19 08:30:32,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-04-19 08:30:32,228 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-19 08:30:32,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-04-19 08:30:33,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:30:33,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-19 08:30:34,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-04-19 08:30:34,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:30:34,658 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-04-19 08:30:35,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-04-19 08:30:35,156 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-19 08:30:35,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-04-19 08:30:36,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:30:36,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-19 08:30:37,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-04-19 08:30:37,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:30:37,646 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-04-19 08:30:38,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-04-19 08:30:38,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-04-19 08:30:39,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-04-19 08:30:39,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-04-19 08:30:39,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-04-19 08:30:40,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-04-19 08:30:40,488 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:30:40,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-19 08:30:40,488 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:40,488 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:40,495 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:30:40,500 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:30:40,500 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:30:40,505 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:30:40,512 [ scc.git] DEBUG Already up to date. 2024-04-19 08:30:40,512 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-04-19 08:30:40,948 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-19 08:30:40,948 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-04-19 08:30:40,952 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-04-19 08:30:41,362 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-19 08:30:41,363 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-04-19 08:30:41,367 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-04-19 08:30:41,779 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-19 08:30:41,779 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-04-19 08:30:41,784 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:30:41,784 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:41,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:41,789 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-04-19 08:30:41,796 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:41,802 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-04-19 08:30:41,811 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:30:41,814 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-04-19 08:30:41,814 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-04-19 08:30:42,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:30:42,043 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-04-19 08:30:42,049 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:42,054 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-04-19 08:30:42,081 [ scc.git] DEBUG Auto-merging package-lock.json 2024-04-19 08:30:42,082 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:30:42,086 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-04-19 08:30:42,086 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-04-19 08:30:42,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:30:42,472 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-04-19 08:30:42,479 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:42,484 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-04-19 08:30:42,495 [ scc.git] DEBUG Auto-merging package-lock.json 2024-04-19 08:30:42,496 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:30:42,498 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-04-19 08:30:42,499 [ scc.git] DEBUG package.json | 2 +- 2024-04-19 08:30:42,499 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-04-19 08:30:42,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:30:42,882 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:30:42,922 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:42,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:42,928 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:30:42,967 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:30:42,975 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18aecb6fd0> has no local changes 2024-04-19 08:30:42,975 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:30:42,984 [ scc.git] DEBUG [detached HEAD 60308de] merge master -Dorg -Ssuccess-only 2024-04-19 08:30:42,984 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:30:42,985 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:30:43,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-04-19 08:30:43,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-04-19 08:30:44,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-04-19 08:30:44,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:30:45,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-04-19 08:30:45,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:30:45,777 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-04-19 08:30:45,777 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:30:45,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-19 08:30:45,777 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:45,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:45,785 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:30:45,790 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:30:45,791 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:30:45,796 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:30:45,803 [ scc.git] DEBUG Already up to date. 2024-04-19 08:30:45,804 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-04-19 08:30:46,202 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-04-19 08:30:46,202 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-04-19 08:30:46,207 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:30:46,207 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:46,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:46,216 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-04-19 08:30:46,222 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:46,227 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-04-19 08:30:46,237 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:30:46,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:30:46,400 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:30:46,441 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:46,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:46,448 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:30:46,489 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:30:46,496 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18ac426340> has no local changes 2024-04-19 08:30:46,496 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:30:46,505 [ scc.git] DEBUG [detached HEAD 998beb7] merge master -Dorg -Ssuccess-only 2024-04-19 08:30:46,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:30:46,506 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:30:46,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-04-19 08:30:47,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-04-19 08:30:47,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-04-19 08:30:48,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-04-19 08:30:48,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-04-19 08:30:49,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:30:49,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-04-19 08:30:50,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:30:50,280 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-04-19 08:30:50,280 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:30:50,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-19 08:30:50,281 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:50,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:50,286 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:30:50,292 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:30:50,292 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:30:50,297 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:30:50,303 [ scc.git] DEBUG Already up to date. 2024-04-19 08:30:50,303 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-04-19 08:30:50,794 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-04-19 08:30:50,794 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-04-19 08:30:50,804 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:30:50,806 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:50,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:50,824 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-04-19 08:30:50,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:50,840 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-04-19 08:30:50,854 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-04-19 08:30:50,855 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:30:50,858 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-04-19 08:30:50,858 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-04-19 08:30:51,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:30:51,041 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:30:51,080 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:51,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:51,087 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:30:51,128 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:30:51,135 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18ac4625b0> has no local changes 2024-04-19 08:30:51,135 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:30:51,143 [ scc.git] DEBUG [detached HEAD ee3c750] merge master -Dorg -Ssuccess-only 2024-04-19 08:30:51,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:30:51,144 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:30:51,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-04-19 08:30:52,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-04-19 08:30:52,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-04-19 08:30:53,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-04-19 08:30:53,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:30:54,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-04-19 08:30:54,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:30:54,459 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-04-19 08:30:54,460 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:30:54,460 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-19 08:30:54,460 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:54,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:54,468 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:30:54,473 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:30:54,473 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:30:54,478 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:30:54,483 [ scc.git] DEBUG Already up to date. 2024-04-19 08:30:54,484 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-04-19 08:30:54,983 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-04-19 08:30:54,983 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-04-19 08:30:54,987 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:30:54,988 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:54,988 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:54,994 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-19 08:30:55,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:55,007 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-19 08:30:55,042 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-04-19 08:30:55,042 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-04-19 08:30:55,042 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-04-19 08:30:55,042 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-04-19 08:30:55,042 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-04-19 08:30:55,042 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-04-19 08:30:55,042 [ scc.git] DEBUG Auto-merging setup.py 2024-04-19 08:30:55,042 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-04-19 08:30:55,042 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-19 08:30:55,042 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-19 08:30:55,048 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-04-19 08:30:55,056 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-04-19 08:30:55,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:30:55,227 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-19 08:30:55,234 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-04-19 08:30:55,241 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/urls.py - omero_signup/views.py - setup.py --conflicts 2024-04-19 08:30:55,247 [ scc.config] DEBUG Found github.token 2024-04-19 08:30:55,247 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-04-19 08:30:55,247 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:30:55,288 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:55,288 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:55,294 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:30:55,334 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:30:55,341 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18aecaae80> has no local changes 2024-04-19 08:30:55,341 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:30:55,551 [ scc.git] DEBUG [detached HEAD e4b8c16] merge master -Dorg -Ssuccess-only 2024-04-19 08:30:55,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:30:55,551 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:30:55,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-04-19 08:30:56,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-04-19 08:30:56,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-04-19 08:30:57,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-04-19 08:30:57,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:30:58,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-04-19 08:30:58,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:30:58,621 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-04-19 08:30:58,621 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:30:58,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-19 08:30:58,621 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:58,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:58,628 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:30:58,634 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:30:58,634 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:30:58,641 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:30:58,647 [ scc.git] DEBUG Already up to date. 2024-04-19 08:30:58,648 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-04-19 08:30:59,089 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-04-19 08:30:59,090 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-04-19 08:30:59,096 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:30:59,096 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:59,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:59,104 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-04-19 08:30:59,113 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:59,121 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-04-19 08:30:59,134 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-19 08:30:59,137 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-04-19 08:30:59,138 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-04-19 08:30:59,138 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-04-19 08:30:59,138 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-04-19 08:30:59,138 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-04-19 08:30:59,138 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-04-19 08:30:59,138 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-04-19 08:30:59,138 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-04-19 08:30:59,140 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-04-19 08:30:59,140 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-04-19 08:30:59,140 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-04-19 08:30:59,140 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-04-19 08:30:59,140 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-04-19 08:30:59,140 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-04-19 08:30:59,140 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-04-19 08:30:59,140 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-04-19 08:30:59,140 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-04-19 08:30:59,141 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-04-19 08:30:59,141 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-04-19 08:30:59,141 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-04-19 08:30:59,141 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-04-19 08:30:59,141 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-04-19 08:30:59,141 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-04-19 08:30:59,141 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-04-19 08:30:59,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:30:59,309 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:30:59,352 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:59,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:59,359 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:30:59,402 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:30:59,409 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18aecb6df0> has no local changes 2024-04-19 08:30:59,409 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:30:59,419 [ scc.git] DEBUG [detached HEAD 3ff9a04] merge master -Dorg -Ssuccess-only 2024-04-19 08:30:59,420 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:30:59,420 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:30:59,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-04-19 08:30:59,770 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:30:59,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-19 08:30:59,770 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:59,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:59,776 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:30:59,782 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:30:59,782 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:30:59,788 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:30:59,794 [ scc.git] DEBUG Already up to date. 2024-04-19 08:30:59,794 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:30:59,794 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:59,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:59,800 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:30:59,839 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:30:59,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:30:59,844 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:30:59,883 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:30:59,890 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18ac468fa0> has no local changes 2024-04-19 08:30:59,890 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:30:59,899 [ scc.git] DEBUG [detached HEAD bc83c80] merge master -Dorg -Ssuccess-only 2024-04-19 08:30:59,899 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:30:59,900 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:31:00,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-04-19 08:31:00,198 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:31:00,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-19 08:31:00,198 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:00,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:00,204 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:31:00,209 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:31:00,209 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:31:00,214 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:31:00,220 [ scc.git] DEBUG Already up to date. 2024-04-19 08:31:00,220 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:31:00,220 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:00,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:00,226 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:31:00,263 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:00,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:00,269 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:31:00,307 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:31:00,314 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18ac423f70> has no local changes 2024-04-19 08:31:00,314 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:31:00,322 [ scc.git] DEBUG [detached HEAD 16c6281] merge master -Dorg -Ssuccess-only 2024-04-19 08:31:00,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:00,323 [ scc.git] INFO Overriding base-branch from master to main 2024-04-19 08:31:00,323 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:31:00,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-04-19 08:31:01,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-04-19 08:31:01,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-04-19 08:31:02,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-04-19 08:31:02,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-04-19 08:31:03,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:31:03,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-19 08:31:04,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-04-19 08:31:04,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:31:04,701 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-04-19 08:31:04,701 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:31:04,701 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-19 08:31:04,701 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:04,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:04,707 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-04-19 08:31:04,712 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:31:04,713 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-04-19 08:31:04,718 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-04-19 08:31:04,724 [ scc.git] DEBUG Already up to date. 2024-04-19 08:31:04,724 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-04-19 08:31:05,138 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-04-19 08:31:05,139 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-04-19 08:31:05,144 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:31:05,144 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:05,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:05,150 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-19 08:31:05,155 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:05,160 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-19 08:31:05,246 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-04-19 08:31:05,247 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-04-19 08:31:05,247 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-19 08:31:05,247 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-19 08:31:05,254 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-04-19 08:31:05,261 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-04-19 08:31:05,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:05,419 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-19 08:31:05,426 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-04-19 08:31:05,433 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-04-19 08:31:05,439 [ scc.config] DEBUG Found github.token 2024-04-19 08:31:05,439 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-04-19 08:31:05,439 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:31:05,482 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:05,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:05,488 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:31:05,531 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:31:05,538 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18ac3f0b50> has no local changes 2024-04-19 08:31:05,538 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:31:05,548 [ scc.git] DEBUG [detached HEAD 22d1a45] merge master -Dorg -Ssuccess-only 2024-04-19 08:31:05,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:05,549 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:31:05,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-04-19 08:31:05,864 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:31:05,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-19 08:31:05,864 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:05,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:05,870 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:31:05,876 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:31:05,876 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:31:05,882 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:31:05,887 [ scc.git] DEBUG Already up to date. 2024-04-19 08:31:05,887 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:31:05,887 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:05,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:05,893 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:31:05,930 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:05,930 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:05,936 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:31:05,973 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:31:05,980 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18ac406e50> has no local changes 2024-04-19 08:31:05,980 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:31:05,988 [ scc.git] DEBUG [detached HEAD 3f7c287] merge master -Dorg -Ssuccess-only 2024-04-19 08:31:05,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:05,988 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:31:06,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-04-19 08:31:06,291 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:31:06,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-19 08:31:06,292 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:06,292 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:06,298 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:31:06,304 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:31:06,304 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:31:06,311 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:31:06,318 [ scc.git] DEBUG Already up to date. 2024-04-19 08:31:06,318 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:31:06,319 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:06,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:06,323 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:31:06,364 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:06,364 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:06,370 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:31:06,415 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:31:06,423 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18ac346940> has no local changes 2024-04-19 08:31:06,424 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:31:06,434 [ scc.git] DEBUG [detached HEAD 17caede] merge master -Dorg -Ssuccess-only 2024-04-19 08:31:06,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:06,435 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:31:06,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-04-19 08:31:07,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-04-19 08:31:07,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-04-19 08:31:08,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-04-19 08:31:08,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:31:09,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-04-19 08:31:09,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:31:09,586 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-04-19 08:31:09,586 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:31:09,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-19 08:31:09,586 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:09,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:09,592 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-19 08:31:09,597 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:31:09,597 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-19 08:31:09,603 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-19 08:31:09,609 [ scc.git] DEBUG Already up to date. 2024-04-19 08:31:09,610 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-04-19 08:31:10,036 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-04-19 08:31:10,037 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-04-19 08:31:10,041 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:31:10,042 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:10,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:10,047 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-19 08:31:10,054 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:10,060 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-19 08:31:10,090 [ scc.git] DEBUG Auto-merging Dockerfile 2024-04-19 08:31:10,090 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-04-19 08:31:10,090 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-19 08:31:10,090 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-19 08:31:10,096 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-04-19 08:31:10,103 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-04-19 08:31:10,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:10,270 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-19 08:31:10,277 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-04-19 08:31:10,282 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-04-19 08:31:10,286 [ scc.config] DEBUG Found github.token 2024-04-19 08:31:10,287 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-04-19 08:31:10,287 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:31:10,328 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:10,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:10,335 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:31:10,374 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:31:10,381 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18ac3979d0> has no local changes 2024-04-19 08:31:10,382 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:31:10,392 [ scc.git] DEBUG [detached HEAD 64eb18c] merge master -Dorg -Ssuccess-only 2024-04-19 08:31:10,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:10,393 [ scc.git] INFO Overriding base-branch from master to develop 2024-04-19 08:31:10,393 [ scc.repo] DEBUG ## PRs found: 2024-04-19 08:31:10,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-04-19 08:31:11,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-04-19 08:31:11,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-04-19 08:31:12,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-04-19 08:31:12,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-04-19 08:31:13,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-04-19 08:31:13,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-04-19 08:31:14,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-04-19 08:31:14,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-19 08:31:15,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-04-19 08:31:15,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-04-19 08:31:15,524 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-04-19 08:31:15,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-04-19 08:31:16,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-04-19 08:31:16,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-04-19 08:31:17,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-04-19 08:31:17,459 [ scc.repo] DEBUG ## Branches found: 2024-04-19 08:31:17,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-19 08:31:17,459 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:17,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:17,466 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-04-19 08:31:17,472 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-19 08:31:17,472 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-04-19 08:31:17,480 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-04-19 08:31:17,487 [ scc.git] DEBUG Already up to date. 2024-04-19 08:31:17,487 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-04-19 08:31:17,899 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-04-19 08:31:17,899 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-04-19 08:31:17,903 [ scc.git] DEBUG ## Unique users: [] 2024-04-19 08:31:17,904 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:17,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:17,909 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-19 08:31:17,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:17,923 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-19 08:31:17,950 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-04-19 08:31:17,950 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-04-19 08:31:17,950 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-19 08:31:17,950 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-19 08:31:17,957 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a' 2024-04-19 08:31:17,965 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-04-19 08:31:18,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:18,236 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-19 08:31:18,244 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a' 2024-04-19 08:31:18,250 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#36](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-04-19 08:31:18,255 [ scc.config] DEBUG Found github.token 2024-04-19 08:31:18,255 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-04-19 08:31:18,255 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-19 08:31:18,293 [ scc.git] DEBUG Get sha1 of %s 2024-04-19 08:31:18,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-19 08:31:18,299 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:31:18,338 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:31:18,344 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18ac346bb0> has no local changes 2024-04-19 08:31:18,345 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:31:18,353 [ scc.git] DEBUG [detached HEAD a058da4] merge master -Dorg -Ssuccess-only 2024-04-19 08:31:18,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:18,354 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-19 08:31:18,429 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-04-19 08:31:18,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:18,650 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-04-19 08:31:18,656 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-04-19 08:31:19,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:19,058 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-04-19 08:31:19,063 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-04-19 08:31:19,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:19,470 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-04-19 08:31:19,476 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-04-19 08:31:19,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:19,893 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-04-19 08:31:20,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:20,304 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-04-19 08:31:20,309 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-04-19 08:31:20,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:20,718 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-04-19 08:31:20,726 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-04-19 08:31:21,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:21,126 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-04-19 08:31:21,135 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-04-19 08:31:21,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:21,525 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-04-19 08:31:21,533 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-04-19 08:31:21,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:21,939 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-04-19 08:31:21,944 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-04-19 08:31:22,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:22,351 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-04-19 08:31:22,358 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-04-19 08:31:22,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:22,756 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-04-19 08:31:22,761 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-04-19 08:31:23,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:23,173 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-04-19 08:31:23,179 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-04-19 08:31:23,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:23,585 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-04-19 08:31:23,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:23,990 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-04-19 08:31:24,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:24,399 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-04-19 08:31:24,404 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-04-19 08:31:24,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:24,814 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-04-19 08:31:25,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:25,217 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-04-19 08:31:25,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:25,621 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-04-19 08:31:25,626 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-04-19 08:31:26,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:26,033 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-04-19 08:31:26,038 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-04-19 08:31:26,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:26,454 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-04-19 08:31:26,460 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-04-19 08:31:26,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:26,867 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-04-19 08:31:26,872 [ scc.config] DEBUG Found submodule.scripts.url 2024-04-19 08:31:27,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-19 08:31:27,273 [ scc.config] DEBUG Found submodule.scripts.branch 2024-04-19 08:31:27,273 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-19 08:31:27,361 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f18b215b460> has local changes 2024-04-19 08:31:27,362 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 549 will-moore 'Inset feature' (stage: draft) - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 477 will-moore 'Vite' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 469 will-moore 'changelog 0.14.0' - PR 470 will-moore 'Movie playing waits for planes' - PR 471 will-moore 'Z projection disabled tooltip' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#36 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/36/)' 2024-04-19 08:31:27,376 [ scc.git] DEBUG [detached HEAD 58b0ec8] merge master -Dorg -Ssuccess-only 2024-04-19 08:31:27,377 [ scc.merge] INFO Repository: ome/omero-plugins 2024-04-19 08:31:27,377 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-04-19 08:31:27,377 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,377 [ scc.merge] INFO 2024-04-19 08:31:27,377 [ scc.merge] INFO Merged PRs: 2024-04-19 08:31:27,377 [ scc.merge] INFO - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' 2024-04-19 08:31:27,377 [ scc.merge] INFO 2024-04-19 08:31:27,377 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-04-19 08:31:27,377 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,377 [ scc.merge] INFO 2024-04-19 08:31:27,377 [ scc.merge] INFO 2024-04-19 08:31:27,377 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-04-19 08:31:27,377 [ scc.merge] INFO Excluded PRs: 2024-04-19 08:31:27,377 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-04-19 08:31:27,377 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,377 [ scc.merge] INFO 2024-04-19 08:31:27,377 [ scc.merge] INFO Merged PRs: 2024-04-19 08:31:27,377 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-04-19 08:31:27,377 [ scc.merge] INFO 2024-04-19 08:31:27,377 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-04-19 08:31:27,377 [ scc.merge] INFO Excluded PRs: 2024-04-19 08:31:27,377 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-04-19 08:31:27,377 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-04-19 08:31:27,377 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-04-19 08:31:27,378 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-04-19 08:31:27,378 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,378 [ scc.merge] INFO 2024-04-19 08:31:27,378 [ scc.merge] INFO Merged PRs: 2024-04-19 08:31:27,378 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-04-19 08:31:27,378 [ scc.merge] INFO 2024-04-19 08:31:27,378 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-04-19 08:31:27,378 [ scc.merge] INFO Excluded PRs: 2024-04-19 08:31:27,378 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-04-19 08:31:27,378 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-04-19 08:31:27,378 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,378 [ scc.merge] INFO 2024-04-19 08:31:27,378 [ scc.merge] INFO Merged PRs: 2024-04-19 08:31:27,378 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-04-19 08:31:27,378 [ scc.merge] INFO 2024-04-19 08:31:27,378 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-19 08:31:27,378 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-04-19 08:31:27,378 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-04-19 08:31:27,378 [ scc.merge] INFO 2024-04-19 08:31:27,378 [ scc.merge] INFO Repository: ome/omero-figure 2024-04-19 08:31:27,378 [ scc.merge] INFO Excluded PRs: 2024-04-19 08:31:27,378 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' (stage: draft) 2024-04-19 08:31:27,378 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (stage: draft) 2024-04-19 08:31:27,378 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,378 [ scc.merge] INFO 2024-04-19 08:31:27,378 [ scc.merge] INFO Merged PRs: 2024-04-19 08:31:27,378 [ scc.merge] INFO - PR 477 will-moore 'Vite' 2024-04-19 08:31:27,378 [ scc.merge] INFO 2024-04-19 08:31:27,378 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-04-19 08:31:27,378 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,378 [ scc.merge] INFO 2024-04-19 08:31:27,378 [ scc.merge] INFO Merged PRs: 2024-04-19 08:31:27,378 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-04-19 08:31:27,378 [ scc.merge] INFO 2024-04-19 08:31:27,378 [ scc.merge] INFO Repository: ome/omero-gallery 2024-04-19 08:31:27,378 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,378 [ scc.merge] INFO 2024-04-19 08:31:27,378 [ scc.merge] INFO Merged PRs: 2024-04-19 08:31:27,378 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-04-19 08:31:27,379 [ scc.merge] INFO 2024-04-19 08:31:27,379 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-04-19 08:31:27,379 [ scc.merge] INFO Excluded PRs: 2024-04-19 08:31:27,379 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-04-19 08:31:27,379 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-04-19 08:31:27,379 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,379 [ scc.merge] INFO 2024-04-19 08:31:27,379 [ scc.merge] INFO Merged PRs: 2024-04-19 08:31:27,379 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-04-19 08:31:27,379 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-04-19 08:31:27,379 [ scc.merge] INFO - PR 469 will-moore 'changelog 0.14.0' 2024-04-19 08:31:27,379 [ scc.merge] INFO - PR 470 will-moore 'Movie playing waits for planes' 2024-04-19 08:31:27,379 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-04-19 08:31:27,379 [ scc.merge] INFO 2024-04-19 08:31:27,379 [ scc.merge] INFO Repository: ome/omero-mapr 2024-04-19 08:31:27,379 [ scc.merge] INFO Excluded PRs: 2024-04-19 08:31:27,379 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-04-19 08:31:27,379 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,379 [ scc.merge] INFO 2024-04-19 08:31:27,379 [ scc.merge] INFO Merged PRs: 2024-04-19 08:31:27,379 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-04-19 08:31:27,379 [ scc.merge] INFO 2024-04-19 08:31:27,379 [ scc.merge] INFO Repository: ome/omero-metadata 2024-04-19 08:31:27,379 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,379 [ scc.merge] INFO 2024-04-19 08:31:27,379 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-19 08:31:27,379 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-04-19 08:31:27,379 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-04-19 08:31:27,379 [ scc.merge] INFO 2024-04-19 08:31:27,379 [ scc.merge] INFO Repository: ome/omero-parade 2024-04-19 08:31:27,379 [ scc.merge] INFO Excluded PRs: 2024-04-19 08:31:27,379 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-04-19 08:31:27,379 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-04-19 08:31:27,379 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-04-19 08:31:27,379 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,379 [ scc.merge] INFO 2024-04-19 08:31:27,379 [ scc.merge] INFO Merged PRs: 2024-04-19 08:31:27,379 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-04-19 08:31:27,379 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-04-19 08:31:27,380 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-04-19 08:31:27,380 [ scc.merge] INFO 2024-04-19 08:31:27,380 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-04-19 08:31:27,380 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,380 [ scc.merge] INFO 2024-04-19 08:31:27,380 [ scc.merge] INFO Merged PRs: 2024-04-19 08:31:27,380 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-04-19 08:31:27,380 [ scc.merge] INFO 2024-04-19 08:31:27,380 [ scc.merge] INFO Repository: ome/omero-rois 2024-04-19 08:31:27,380 [ scc.merge] INFO Excluded PRs: 2024-04-19 08:31:27,380 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-04-19 08:31:27,380 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,380 [ scc.merge] INFO 2024-04-19 08:31:27,380 [ scc.merge] INFO Merged PRs: 2024-04-19 08:31:27,380 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-04-19 08:31:27,380 [ scc.merge] INFO 2024-04-19 08:31:27,380 [ scc.merge] INFO Repository: ome/omero-signup 2024-04-19 08:31:27,380 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,380 [ scc.merge] INFO 2024-04-19 08:31:27,380 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-19 08:31:27,380 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-04-19 08:31:27,380 [ scc.merge] INFO 2024-04-19 08:31:27,380 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-04-19 08:31:27,380 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,380 [ scc.merge] INFO 2024-04-19 08:31:27,380 [ scc.merge] INFO Merged PRs: 2024-04-19 08:31:27,381 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-04-19 08:31:27,381 [ scc.merge] INFO 2024-04-19 08:31:27,381 [ scc.merge] INFO Repository: ome/omero-upload 2024-04-19 08:31:27,381 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,381 [ scc.merge] INFO 2024-04-19 08:31:27,381 [ scc.merge] INFO 2024-04-19 08:31:27,381 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-04-19 08:31:27,381 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,381 [ scc.merge] INFO 2024-04-19 08:31:27,381 [ scc.merge] INFO 2024-04-19 08:31:27,381 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-04-19 08:31:27,381 [ scc.merge] INFO Excluded PRs: 2024-04-19 08:31:27,381 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-04-19 08:31:27,381 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,381 [ scc.merge] INFO 2024-04-19 08:31:27,381 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-19 08:31:27,381 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-04-19 08:31:27,381 [ scc.merge] INFO 2024-04-19 08:31:27,381 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-04-19 08:31:27,381 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,381 [ scc.merge] INFO 2024-04-19 08:31:27,381 [ scc.merge] INFO 2024-04-19 08:31:27,381 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-04-19 08:31:27,381 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,381 [ scc.merge] INFO 2024-04-19 08:31:27,381 [ scc.merge] INFO 2024-04-19 08:31:27,381 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-04-19 08:31:27,381 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,381 [ scc.merge] INFO 2024-04-19 08:31:27,381 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-19 08:31:27,381 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-04-19 08:31:27,381 [ scc.merge] INFO 2024-04-19 08:31:27,381 [ scc.merge] INFO Repository: ome/scripts 2024-04-19 08:31:27,381 [ scc.merge] INFO Excluded PRs: 2024-04-19 08:31:27,381 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-04-19 08:31:27,381 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-04-19 08:31:27,381 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-04-19 08:31:27,381 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-04-19 08:31:27,381 [ scc.merge] INFO Already up to date. 2024-04-19 08:31:27,382 [ scc.merge] INFO 2024-04-19 08:31:27,382 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-19 08:31:27,382 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-04-19 08:31:27,382 [ scc.merge] INFO 2024-04-19 08:31:27,382 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-04-19 08:31:27,382 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-19 08:31:27,389 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-19 08:31:27,395 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-19 08:31:27,401 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-19 08:31:27,407 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-19 08:31:27,413 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-19 08:31:27,418 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-19 08:31:27,425 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,431 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,432 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-19 08:31:27,432 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-19 08:31:27,443 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,450 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,451 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-19 08:31:27,451 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-19 08:31:27,457 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-19 08:31:27,464 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,470 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,470 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-19 08:31:27,470 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-19 08:31:27,477 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-19 08:31:27,484 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-19 08:31:27,491 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-19 08:31:27,498 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-19 08:31:27,505 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-19 08:31:27,512 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-19 08:31:27,519 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-19 08:31:27,526 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-19 08:31:27,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-19 08:31:27,536 [ scc.git] DEBUG Calling 'git remote' 2024-04-19 08:31:27,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.8.2 to 5.9.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 2aed28c] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from ded0caab nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 9d8d147 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from a0148a6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 5a90893 nothing to commit, working tree clean [detached HEAD 8389c0a] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-19 08:32:14,054 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-19 08:32:23,200 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-19 08:32:25,601 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-19 08:32:30,141 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-19 08:33:18,653 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS