Started by upstream project "Trigger" build number 10
originally caused by:
Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-plugins-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.47.3'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/e9d96de4efbb3e39a2ce24824e54985c7c2760a6ed46c5415ea0aa1fd1e18d41/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.47.3'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
Commit message: "Merge pull request #18 from jburel/python_311"
> git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master)
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-plugins.git
> git --version # timeout=10
> git --version # 'git version 2.52.0'
> git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378"
> git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
Cleaning workspace
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
> git submodule foreach --recursive git reset --hard # timeout=10
> git submodule foreach --recursive git clean -fdx # timeout=10
> git remote # timeout=10
> git submodule init # timeout=10
> git submodule sync # timeout=10
> git config --get remote.origin.url # timeout=10
> git submodule init # timeout=10
> git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
> git config --get submodule.omero-figure.url # timeout=10
> git config -f .gitmodules --get submodule.omero-figure.path # timeout=10
> git config --get submodule.minimal-omero-client.url # timeout=10
> git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10
> git config --get submodule.scripts.url # timeout=10
> git config -f .gitmodules --get submodule.scripts.path # timeout=10
> git config --get submodule.omero-test-infra.url # timeout=10
> git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10
> git config --get submodule.omero-prometheus-tools.url # timeout=10
> git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10
> git config --get submodule.omero-parade.url # timeout=10
> git config -f .gitmodules --get submodule.omero-parade.path # timeout=10
> git config --get submodule.omero-mapr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10
> git config --get submodule.omero-fpbioimage.url # timeout=10
> git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10
> git config --get submodule.omero-iviewer.url # timeout=10
> git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10
> git config --get submodule.omero-gallery.url # timeout=10
> git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10
> git config --get submodule.rOMERO-gateway.url # timeout=10
> git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10
> git config --get submodule.omero-weberror.url # timeout=10
> git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10
> git config --get submodule.omero-cli-render.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10
> git config --get submodule.omero-cli-duplicate.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10
> git config --get submodule.omero-metadata.url # timeout=10
> git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10
> git config --get submodule.omero-webtest.url # timeout=10
> git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10
> git config --get submodule.omero-upload.url # timeout=10
> git config -f .gitmodules --get submodule.omero-upload.path # timeout=10
> git config --get submodule.omero-virtual-microscope.url # timeout=10
> git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10
> git config --get submodule.omero-rois.url # timeout=10
> git config -f .gitmodules --get submodule.omero-rois.path # timeout=10
> git config --get submodule.omero-signup.url # timeout=10
> git config -f .gitmodules --get submodule.omero-signup.path # timeout=10
> git config --get submodule.omero-web-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10
> git config --get submodule.omero-cli-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10
> git submodule update --init --recursive omero-figure # timeout=10
> git submodule update --init --recursive minimal-omero-client # timeout=10
> git submodule update --init --recursive scripts # timeout=10
> git submodule update --init --recursive omero-test-infra # timeout=10
> git submodule update --init --recursive omero-prometheus-tools # timeout=10
> git submodule update --init --recursive omero-parade # timeout=10
> git submodule update --init --recursive omero-mapr # timeout=10
> git submodule update --init --recursive omero-fpbioimage # timeout=10
> git submodule update --init --recursive omero-iviewer # timeout=10
> git submodule update --init --recursive omero-gallery # timeout=10
> git submodule update --init --recursive rOMERO-gateway # timeout=10
> git submodule update --init --recursive omero-weberror # timeout=10
> git submodule update --init --recursive omero-cli-render # timeout=10
> git submodule update --init --recursive omero-cli-duplicate # timeout=10
> git submodule update --init --recursive omero-metadata # timeout=10
> git submodule update --init --recursive omero-webtest # timeout=10
> git submodule update --init --recursive omero-upload # timeout=10
> git submodule update --init --recursive omero-virtual-microscope # timeout=10
> git submodule update --init --recursive omero-rois # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 14
[Pipeline] sh
+ pushd build
~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push
+ tar -zxf -
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ popd
~/workspace/OMERO-plugins-push
+ python3.11 -m venv build/venv
> git submodule update --init --recursive omero-signup # timeout=10
> git submodule update --init --recursive omero-web-zarr # timeout=10
> git submodule update --init --recursive omero-cli-zarr # timeout=10
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ python3.11 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1)
Collecting pip
Using cached pip-26.1.2-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 22.3.1
Uninstalling pip-22.3.1:
Successfully uninstalled pip-22.3.1
Successfully installed pip-26.1.2
+ python3.11 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached pygithub-2.9.1-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached pyjwt-2.13.0-py3-none-any.whl.metadata (3.4 kB)
Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-49.0.0-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.3 kB)
Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cffi-2.1.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB)
Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB)
Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (41 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.18-py3-none-any.whl.metadata (6.1 kB)
Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2026.6.17-py3-none-any.whl.metadata (2.5 kB)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached pygithub-2.9.1-py3-none-any.whl (449 kB)
Using cached pyjwt-2.13.0-py3-none-any.whl (31 kB)
Using cached cryptography-49.0.0-cp311-abi3-manylinux_2_34_x86_64.whl (4.7 MB)
Using cached cffi-2.1.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB)
Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB)
Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
Using cached requests-2.34.2-py3-none-any.whl (73 kB)
Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (221 kB)
Using cached idna-3.18-py3-none-any.whl (65 kB)
Using cached certifi-2026.6.17-py3-none-any.whl (133 kB)
Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached pycparser-3.0-py3-none-any.whl (48 kB)
Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc
Successfully installed PyGithub-2.9.1 PyYAML-6.0.3 certifi-2026.6.17 cffi-2.1.0 charset_normalizer-3.4.9 cryptography-49.0.0 future-1.0.0 idna-3.18 pycparser-3.0 pyjwt-2.13.0 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-plugins.git
+ BASE_REPO=omero-plugins.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-07-11 01:29:41,229 [ scc.config] DEBUG Found github.token
2026-07-11 01:29:41,230 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-07-11 01:29:41,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:29:41,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:29:42,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-07-11 01:29:42,311 [ scc.gh] DEBUG 4891 remaining from 5000 (Reset at 01:07
2026-07-11 01:29:42,311 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:29:42,323 [ scc.git] DEBUG Check current status
2026-07-11 01:29:42,323 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:29:42,346 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2026-07-11 01:29:42,347 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:29:42,545 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master)
2026-07-11 01:29:42,587 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2026-07-11 01:29:42,651 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2026-07-11 01:29:42,693 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2026-07-11 01:29:42,753 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2026-07-11 01:29:42,792 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2026-07-11 01:29:42,832 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2026-07-11 01:29:42,877 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46)
2026-07-11 01:29:42,918 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2026-07-11 01:29:42,961 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2026-07-11 01:29:43,004 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2026-07-11 01:29:43,043 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2026-07-11 01:29:43,085 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2026-07-11 01:29:43,128 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2026-07-11 01:29:43,170 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2026-07-11 01:29:43,213 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2026-07-11 01:29:43,256 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2026-07-11 01:29:43,318 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2026-07-11 01:29:43,362 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2026-07-11 01:29:43,398 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2026-07-11 01:29:43,434 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2026-07-11 01:29:43,455 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2026-07-11 01:29:43,466 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:29:43,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2026-07-11 01:29:44,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:29:44,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:29:45,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:29:45,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:29:45,634 [ scc.git] DEBUG Resetting...
2026-07-11 01:29:45,634 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-07-11 01:29:45,959 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2026-07-11 01:29:45,960 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-07-11 01:29:47,250 [ scc.git] DEBUG Check current status
2026-07-11 01:29:47,250 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:29:47,265 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2026-07-11 01:29:47,266 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:29:47,464 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master)
2026-07-11 01:29:47,495 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2026-07-11 01:29:47,526 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2026-07-11 01:29:47,558 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2026-07-11 01:29:47,589 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2026-07-11 01:29:47,622 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2026-07-11 01:29:47,652 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2026-07-11 01:29:47,686 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46)
2026-07-11 01:29:47,717 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2026-07-11 01:29:47,746 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2026-07-11 01:29:47,778 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2026-07-11 01:29:47,804 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2026-07-11 01:29:47,838 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2026-07-11 01:29:47,869 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2026-07-11 01:29:47,901 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2026-07-11 01:29:47,931 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2026-07-11 01:29:47,959 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2026-07-11 01:29:47,990 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2026-07-11 01:29:48,021 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2026-07-11 01:29:48,052 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2026-07-11 01:29:48,081 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2026-07-11 01:29:48,102 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2026-07-11 01:29:48,103 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-07-11 01:29:48,103 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-07-11 01:29:48,103 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-07-11 01:29:48,103 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-07-11 01:29:48,103 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-07-11 01:29:48,103 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:29:48,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2026-07-11 01:29:48,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2026-07-11 01:29:48,870 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:29:48,870 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2026-07-11 01:29:49,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2026-07-11 01:29:49,346 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:29:49,346 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2026-07-11 01:29:49,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2026-07-11 01:29:49,813 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:29:49,813 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2026-07-11 01:29:49,813 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:29:49,813 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:29:49,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:29:49,825 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:29:49,840 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:29:49,840 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:29:49,858 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:29:49,918 [ scc.git] DEBUG Already up to date.
2026-07-11 01:29:49,918 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2026-07-11 01:29:50,351 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2026-07-11 01:29:50,351 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2026-07-11 01:29:50,375 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2026-07-11 01:29:50,747 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2026-07-11 01:29:50,747 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2026-07-11 01:29:50,771 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2026-07-11 01:29:51,161 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2026-07-11 01:29:51,162 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2026-07-11 01:29:51,194 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:29:51,194 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:29:51,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:29:51,204 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2026-07-11 01:29:51,224 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:29:51,234 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2026-07-11 01:29:51,911 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:29:51,974 [ scc.git] DEBUG scripts | 2 +-
2026-07-11 01:29:51,974 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-07-11 01:29:52,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:29:52,165 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2026-07-11 01:29:52,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:29:52,198 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2026-07-11 01:29:52,859 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:29:52,914 [ scc.git] DEBUG omero-figure | 2 +-
2026-07-11 01:29:52,914 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-07-11 01:29:53,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:29:53,101 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2026-07-11 01:29:53,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:29:53,135 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2026-07-11 01:29:53,779 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:29:53,840 [ scc.git] DEBUG omero-iviewer | 2 +-
2026-07-11 01:29:53,840 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-07-11 01:29:54,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:29:54,031 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:29:54,706 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2026-07-11 01:29:55,468 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2026-07-11 01:29:55,769 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2026-07-11 01:29:55,770 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:29:55,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:29:55,779 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:29:57,959 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5ae5f79510> has no local changes
2026-07-11 01:29:57,959 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:29:59,255 [ scc.git] DEBUG [detached HEAD 0ad179d] merge master -Dorg -Snone
2026-07-11 01:29:59,256 [ scc.merge] INFO Repository: ome/omero-plugins
2026-07-11 01:29:59,256 [ scc.merge] INFO Already up to date.
2026-07-11 01:29:59,256 [ scc.merge] INFO
2026-07-11 01:29:59,256 [ scc.merge] INFO Merged PRs:
2026-07-11 01:29:59,256 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2026-07-11 01:29:59,257 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2026-07-11 01:29:59,257 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2026-07-11 01:29:59,257 [ scc.merge] INFO
2026-07-11 01:29:59,257 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-07-11 01:29:59,257 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'minimal-omero-client'
Synchronizing submodule url for 'omero-cli-duplicate'
Synchronizing submodule url for 'omero-cli-render'
Synchronizing submodule url for 'omero-cli-zarr'
Synchronizing submodule url for 'omero-figure'
Synchronizing submodule url for 'omero-fpbioimage'
Synchronizing submodule url for 'omero-gallery'
Synchronizing submodule url for 'omero-iviewer'
Synchronizing submodule url for 'omero-mapr'
Synchronizing submodule url for 'omero-metadata'
Synchronizing submodule url for 'omero-parade'
Synchronizing submodule url for 'omero-prometheus-tools'
Synchronizing submodule url for 'omero-rois'
Synchronizing submodule url for 'omero-signup'
Synchronizing submodule url for 'omero-test-infra'
Synchronizing submodule url for 'omero-upload'
Synchronizing submodule url for 'omero-virtual-microscope'
Synchronizing submodule url for 'omero-web-zarr'
Synchronizing submodule url for 'omero-weberror'
Synchronizing submodule url for 'omero-webtest'
Synchronizing submodule url for 'rOMERO-gateway'
Synchronizing submodule url for 'scripts'
Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8'
Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec'
Submodule path 'omero-figure': checked out '188872793f83c8a30a4cda1d0db1412c61401c00'
Submodule path 'omero-iviewer': checked out 'cae0b0260125ca856c05b4ac7d723879827a6e76'
Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501'
Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959'
Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77'
Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f'
Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368'
Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0'
Merge all submodules using repository configuration:
base-branch: master
submodules:
scripts:
base-branch: develop
omero-web-zarr:
base-branch: main
2026-07-11 01:30:16,836 [ scc.config] DEBUG Found github.token
2026-07-11 01:30:16,838 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-07-11 01:30:17,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:30:17,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:30:17,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-07-11 01:30:17,908 [ scc.gh] DEBUG 4888 remaining from 5000 (Reset at 01:07
2026-07-11 01:30:17,909 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:30:17,918 [ scc.git] DEBUG Check current status
2026-07-11 01:30:17,918 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:30:17,939 [ scc.git] DEBUG 0ad179d merge master -Dorg -Snone
2026-07-11 01:30:17,940 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:30:18,138 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master)
2026-07-11 01:30:18,172 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2026-07-11 01:30:18,208 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303)
2026-07-11 01:30:18,245 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8)
2026-07-11 01:30:18,281 [ scc.git] DEBUG +188872793f83c8a30a4cda1d0db1412c61401c00 omero-figure (v8.0.1.rc2-14-g18887279)
2026-07-11 01:30:18,317 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2026-07-11 01:30:18,352 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2026-07-11 01:30:18,392 [ scc.git] DEBUG +cae0b0260125ca856c05b4ac7d723879827a6e76 omero-iviewer (v0.17.0-3-gcae0b026)
2026-07-11 01:30:18,427 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2026-07-11 01:30:18,464 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2)
2026-07-11 01:30:18,500 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2026-07-11 01:30:18,534 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2026-07-11 01:30:18,567 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96)
2026-07-11 01:30:18,598 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2026-07-11 01:30:18,632 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015)
2026-07-11 01:30:18,668 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2026-07-11 01:30:18,704 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894)
2026-07-11 01:30:18,739 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685)
2026-07-11 01:30:18,774 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2026-07-11 01:30:18,811 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2026-07-11 01:30:18,848 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2026-07-11 01:30:18,872 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768)
2026-07-11 01:30:18,882 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:30:18,882 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2026-07-11 01:30:18,885 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-web-zarr:
base-branch: main
scripts:
base-branch: develop
2026-07-11 01:30:19,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2026-07-11 01:30:19,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:30:20,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:30:20,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:30:21,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:30:21,063 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:30:21,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2026-07-11 01:30:21,234 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:30:21,245 [ scc.git] DEBUG Check current status
2026-07-11 01:30:21,245 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:30:21,263 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0
2026-07-11 01:30:21,264 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:30:21,375 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:30:21,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None
2026-07-11 01:30:22,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:30:22,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:30:23,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:30:23,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:30:23,621 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:30:23,735 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:30:23,735 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2026-07-11 01:30:23,736 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:30:23,746 [ scc.git] DEBUG Check current status
2026-07-11 01:30:23,747 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:30:23,765 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build
2026-07-11 01:30:23,766 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:30:23,891 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:30:24,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None
2026-07-11 01:30:24,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:30:25,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:30:25,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:30:26,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:30:26,057 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:30:26,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:30:26,163 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2026-07-11 01:30:26,163 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:30:26,175 [ scc.git] DEBUG Check current status
2026-07-11 01:30:26,175 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:30:26,192 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease
2026-07-11 01:30:26,193 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:30:26,298 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:30:26,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None
2026-07-11 01:30:27,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:30:27,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:30:28,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:30:28,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:30:28,497 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:30:28,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:30:28,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2026-07-11 01:30:28,606 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:30:28,619 [ scc.git] DEBUG Check current status
2026-07-11 01:30:28,619 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:30:28,640 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0
2026-07-11 01:30:28,641 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:30:28,765 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:30:29,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None
2026-07-11 01:30:29,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:30:30,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:30:30,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:30:30,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:30:30,948 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:30:31,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:30:31,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2026-07-11 01:30:31,078 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:30:31,093 [ scc.git] DEBUG Check current status
2026-07-11 01:30:31,093 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:30:31,116 [ scc.git] DEBUG 18887279 Merge pull request #693 from ome/dependabot/npm_and_yarn/dompurify-3.4.9
2026-07-11 01:30:31,117 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:30:31,244 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:30:31,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None
2026-07-11 01:30:32,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:30:32,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:30:33,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:30:33,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:30:33,569 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:30:33,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:30:33,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2026-07-11 01:30:33,677 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:30:33,691 [ scc.git] DEBUG Check current status
2026-07-11 01:30:33,691 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:30:33,711 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build
2026-07-11 01:30:33,712 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:30:33,838 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:30:34,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None
2026-07-11 01:30:34,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:30:35,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:30:35,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:30:36,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:30:36,206 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:30:36,328 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:30:36,328 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2026-07-11 01:30:36,328 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:30:36,344 [ scc.git] DEBUG Check current status
2026-07-11 01:30:36,344 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:30:36,366 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build
2026-07-11 01:30:36,367 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:30:36,493 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:30:36,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None
2026-07-11 01:30:37,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:30:37,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:30:38,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:30:38,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:30:38,676 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:30:38,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:30:38,792 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2026-07-11 01:30:38,792 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:30:38,806 [ scc.git] DEBUG Check current status
2026-07-11 01:30:38,806 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:30:38,826 [ scc.git] DEBUG cae0b026 Merge pull request #534 from will-moore/fix_docs_settings_link
2026-07-11 01:30:38,828 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:30:38,951 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:30:39,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None
2026-07-11 01:30:39,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:30:40,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:30:40,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:30:41,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:30:41,077 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:30:41,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:30:41,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2026-07-11 01:30:41,184 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:30:41,196 [ scc.git] DEBUG Check current status
2026-07-11 01:30:41,196 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:30:41,212 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0
2026-07-11 01:30:41,213 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:30:41,334 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:30:41,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None
2026-07-11 01:30:42,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:30:42,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:30:43,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:30:43,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:30:43,513 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:30:43,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:30:43,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2026-07-11 01:30:43,637 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:30:43,650 [ scc.git] DEBUG Check current status
2026-07-11 01:30:43,650 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:30:43,668 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2026-07-11 01:30:43,670 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:30:43,781 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:30:44,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None
2026-07-11 01:30:44,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:30:45,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:30:45,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:30:45,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:30:45,909 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:30:46,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:30:46,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2026-07-11 01:30:46,034 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:30:46,049 [ scc.git] DEBUG Check current status
2026-07-11 01:30:46,049 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:30:46,070 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build
2026-07-11 01:30:46,071 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:30:46,184 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:30:46,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None
2026-07-11 01:30:47,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:30:50,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:30:50,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:30:51,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:30:51,002 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:30:51,108 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:30:51,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2026-07-11 01:30:51,109 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:30:51,132 [ scc.git] DEBUG Check current status
2026-07-11 01:30:51,132 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:30:51,159 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build
2026-07-11 01:30:51,160 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:30:51,277 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:30:51,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None
2026-07-11 01:30:52,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:30:52,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:30:53,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:30:53,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:30:53,597 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:30:53,715 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:30:53,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2026-07-11 01:30:53,716 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:30:53,729 [ scc.git] DEBUG Check current status
2026-07-11 01:30:53,729 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:30:53,750 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0
2026-07-11 01:30:53,751 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:30:53,869 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:30:54,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None
2026-07-11 01:30:54,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:30:55,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:30:55,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:31:02,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:31:02,980 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:31:03,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:31:03,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2026-07-11 01:31:03,090 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:31:03,101 [ scc.git] DEBUG Check current status
2026-07-11 01:31:03,101 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:31:03,119 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build
2026-07-11 01:31:03,120 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:31:03,227 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:31:03,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None
2026-07-11 01:31:04,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:31:04,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:31:04,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:31:05,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:31:05,353 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:31:05,467 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:31:05,467 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2026-07-11 01:31:05,468 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:31:05,483 [ scc.git] DEBUG Check current status
2026-07-11 01:31:05,483 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:31:05,502 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme
2026-07-11 01:31:05,503 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:31:05,621 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:31:05,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2026-07-11 01:31:05,985 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2026-07-11 01:31:06,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None
2026-07-11 01:31:06,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:31:07,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:31:07,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:31:08,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:31:08,227 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:31:08,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:31:08,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2026-07-11 01:31:08,365 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:31:08,381 [ scc.git] DEBUG Check current status
2026-07-11 01:31:08,381 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:31:08,409 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build
2026-07-11 01:31:08,410 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:31:08,556 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:31:08,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None
2026-07-11 01:31:09,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:31:09,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:31:10,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:31:10,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:31:10,734 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:31:10,860 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:31:10,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2026-07-11 01:31:10,861 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:31:10,882 [ scc.git] DEBUG Check current status
2026-07-11 01:31:10,882 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:31:10,908 [ scc.git] DEBUG 160d894 Fix display of code
2026-07-11 01:31:10,909 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:31:11,047 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:31:11,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None
2026-07-11 01:31:11,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:31:12,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:31:12,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:31:13,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:31:13,210 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:31:13,668 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:31:13,668 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2026-07-11 01:31:13,669 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:31:13,852 [ scc.git] DEBUG Check current status
2026-07-11 01:31:13,852 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:31:13,961 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1
2026-07-11 01:31:13,963 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:31:14,117 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:31:14,118 [ scc.git] DEBUG Repository configuration:
base-branch: main
2026-07-11 01:31:14,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None
2026-07-11 01:31:14,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:31:15,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:31:15,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:31:16,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:31:16,259 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:31:16,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:31:16,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2026-07-11 01:31:16,386 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:31:16,405 [ scc.git] DEBUG Check current status
2026-07-11 01:31:16,405 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:31:16,429 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build
2026-07-11 01:31:16,430 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:31:16,570 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:31:16,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2026-07-11 01:31:16,781 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2026-07-11 01:31:17,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None
2026-07-11 01:31:17,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:31:18,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:31:18,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:31:18,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:31:18,946 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:31:19,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:31:19,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2026-07-11 01:31:19,093 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:31:19,167 [ scc.git] DEBUG Check current status
2026-07-11 01:31:19,167 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:31:19,230 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build
2026-07-11 01:31:19,231 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:31:19,366 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:31:19,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2026-07-11 01:31:19,564 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2026-07-11 01:31:19,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None
2026-07-11 01:31:20,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:31:20,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:31:21,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:31:21,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:31:21,882 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:31:21,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:31:21,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2026-07-11 01:31:21,992 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:31:22,012 [ scc.git] DEBUG Check current status
2026-07-11 01:31:22,012 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:31:22,045 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2026-07-11 01:31:22,046 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:31:22,160 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:31:22,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None
2026-07-11 01:31:22,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:31:23,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:31:23,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:31:24,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:31:24,345 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:31:24,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:31:24,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2026-07-11 01:31:24,487 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-07-11 01:31:25,350 [ scc.git] DEBUG Check current status
2026-07-11 01:31:25,350 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:31:25,387 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0
2026-07-11 01:31:25,388 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:31:25,509 [ scc.config] DEBUG Found remote.origin.url
2026-07-11 01:31:25,509 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2026-07-11 01:31:25,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2026-07-11 01:31:25,723 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2026-07-11 01:31:25,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None
2026-07-11 01:31:26,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-07-11 01:31:26,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-07-11 01:31:27,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-07-11 01:31:27,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-07-11 01:31:27,812 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:31:27,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:31:27,947 [ scc.git] DEBUG Resetting...
2026-07-11 01:31:27,947 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-07-11 01:31:28,935 [ scc.git] DEBUG HEAD is now at 0ad179d merge master -Dorg -Snone
2026-07-11 01:31:28,936 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-07-11 01:31:31,216 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264'
2026-07-11 01:31:32,479 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62'
2026-07-11 01:31:37,569 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2026-07-11 01:31:39,115 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2026-07-11 01:31:40,355 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997'
2026-07-11 01:31:41,632 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9'
2026-07-11 01:31:42,189 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73'
2026-07-11 01:31:42,644 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743'
2026-07-11 01:31:43,019 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2026-07-11 01:31:44,123 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2026-07-11 01:31:44,146 [ scc.git] DEBUG Check current status
2026-07-11 01:31:44,146 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-07-11 01:31:44,186 [ scc.git] DEBUG 0ad179d merge master -Dorg -Snone
2026-07-11 01:31:44,187 [ scc.git] DEBUG Calling 'git submodule status'
2026-07-11 01:31:44,374 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master)
2026-07-11 01:31:44,408 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2026-07-11 01:31:44,441 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2026-07-11 01:31:44,474 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2026-07-11 01:31:44,510 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde)
2026-07-11 01:31:44,544 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2026-07-11 01:31:44,582 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2026-07-11 01:31:44,623 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798cee)
2026-07-11 01:31:44,662 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2026-07-11 01:31:44,700 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2026-07-11 01:31:44,736 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2026-07-11 01:31:44,769 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2026-07-11 01:31:44,803 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2026-07-11 01:31:44,837 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2026-07-11 01:31:44,873 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2026-07-11 01:31:44,909 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2026-07-11 01:31:44,946 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2026-07-11 01:31:44,984 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2026-07-11 01:31:45,026 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2026-07-11 01:31:45,065 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2026-07-11 01:31:45,103 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2026-07-11 01:31:45,126 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755)
2026-07-11 01:31:45,127 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-07-11 01:31:45,127 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-07-11 01:31:45,127 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-07-11 01:31:45,127 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-07-11 01:31:45,127 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-07-11 01:31:45,127 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-07-11 01:31:45,127 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:31:45,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2026-07-11 01:31:45,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2026-07-11 01:31:45,915 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:31:46,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None
2026-07-11 01:31:47,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:31:47,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None
2026-07-11 01:31:48,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:31:48,041 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2026-07-11 01:31:48,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2026-07-11 01:31:48,659 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:31:49,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None
2026-07-11 01:31:49,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:31:50,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None
2026-07-11 01:31:50,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:31:50,807 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2026-07-11 01:31:51,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2026-07-11 01:31:51,306 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:31:51,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None
2026-07-11 01:31:52,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:31:52,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None
2026-07-11 01:31:53,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:31:53,375 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2026-07-11 01:31:53,376 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:31:53,376 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:31:53,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:31:53,411 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:31:53,434 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:31:53,435 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:31:53,468 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:31:53,575 [ scc.git] DEBUG Already up to date.
2026-07-11 01:31:53,575 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2026-07-11 01:31:54,027 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2026-07-11 01:31:54,027 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2026-07-11 01:31:54,062 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2026-07-11 01:31:54,467 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2026-07-11 01:31:54,467 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2026-07-11 01:31:54,508 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2026-07-11 01:31:54,917 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2026-07-11 01:31:54,917 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2026-07-11 01:31:55,001 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:31:55,001 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:31:55,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:31:55,056 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2026-07-11 01:31:55,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:31:55,137 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2026-07-11 01:31:55,380 [ scc.git] DEBUG Already up to date.
2026-07-11 01:31:55,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:31:55,566 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2026-07-11 01:31:55,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:31:55,614 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2026-07-11 01:31:55,763 [ scc.git] DEBUG Already up to date.
2026-07-11 01:31:56,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:31:56,003 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2026-07-11 01:31:56,050 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:31:56,085 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2026-07-11 01:31:56,304 [ scc.git] DEBUG Already up to date.
2026-07-11 01:31:56,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:31:56,495 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:31:57,375 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:31:57,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:31:57,387 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:31:57,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2
2026-07-11 01:31:57,593 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:31:57,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2026-07-11 01:31:57,593 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:31:57,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:31:57,609 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:31:57,627 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:31:57,627 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:31:57,648 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:31:57,766 [ scc.git] DEBUG Already up to date.
2026-07-11 01:31:57,766 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:31:57,766 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:31:57,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:31:57,782 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:31:57,887 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:31:57,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:31:57,901 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:31:58,039 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:31:58,103 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6c4c8990> has no local changes
2026-07-11 01:31:58,103 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/minimal-omero-client
Already up to date.
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:31:58,359 [ scc.git] DEBUG [detached HEAD df7d540] merge master -Dorg -Ssuccess-only
2026-07-11 01:31:58,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:31:58,361 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:31:58,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None
2026-07-11 01:31:59,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None
2026-07-11 01:31:59,310 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:31:59,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:00,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:32:01,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:32:01,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:02,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:32:02,103 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:32:02,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None
2026-07-11 01:32:03,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None
2026-07-11 01:32:03,119 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:32:03,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2026-07-11 01:32:03,119 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:32:03,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:32:03,142 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:32:03,168 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:32:03,168 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:32:03,224 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:32:03,427 [ scc.git] DEBUG Already up to date.
2026-07-11 01:32:03,427 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head'
2026-07-11 01:32:03,865 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate
2026-07-11 01:32:03,865 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD
2026-07-11 01:32:03,910 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:32:03,910 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:32:03,910 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:32:03,936 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4'
2026-07-11 01:32:03,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:32:04,011 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4'
2026-07-11 01:32:04,374 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:32:04,521 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-07-11 01:32:04,521 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-07-11 01:32:04,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:32:04,725 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:32:04,855 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:32:04,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:32:04,889 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:32:05,008 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:32:05,067 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6f20fd90> has no local changes
2026-07-11 01:32:05,067 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:32:05,287 [ scc.git] DEBUG [detached HEAD 102f119] merge master -Dorg -Ssuccess-only
2026-07-11 01:32:05,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:32:05,289 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:32:05,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None
2026-07-11 01:32:06,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None
2026-07-11 01:32:06,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None
2026-07-11 01:32:07,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:07,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:32:08,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:32:08,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:09,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:32:09,192 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate'
2026-07-11 01:32:09,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None
2026-07-11 01:32:10,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None
2026-07-11 01:32:10,158 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:32:10,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2026-07-11 01:32:10,159 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:32:10,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:32:10,189 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:32:10,217 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:32:10,217 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:32:10,255 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:32:10,641 [ scc.git] DEBUG Updating ce6e13c..68b7303
2026-07-11 01:32:11,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None
2026-07-11 01:32:12,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None
2026-07-11 01:32:13,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None
2026-07-11 01:32:13,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None
2026-07-11 01:32:13,783 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head'
2026-07-11 01:32:14,523 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2026-07-11 01:32:14,523 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD
2026-07-11 01:32:14,558 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:32:14,558 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:32:14,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:32:14,577 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99'
2026-07-11 01:32:14,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:32:14,651 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99'
2026-07-11 01:32:14,961 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2026-07-11 01:32:15,209 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:32:15,373 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++--------------------
2026-07-11 01:32:15,373 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-)
2026-07-11 01:32:15,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:32:15,571 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:32:15,712 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:32:15,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:32:15,739 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:32:15,869 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:32:16,031 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6c746cd0> has no local changes
2026-07-11 01:32:16,031 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-render
Excluded PRs:
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Updating ce6e13c..68b7303
Previously merged:
- PR 74 jburel 'Replace manual changelog by automated GH release step'
- PR 75 jburel 'Sort the new channels to ensure settings are set'
- PR 71 dominikl 'Escape slash character in image names'
- PR 69 dominikl 'Fix help text for impo/export commands'
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:32:16,540 [ scc.git] DEBUG [detached HEAD cb70f96] merge master -Dorg -Ssuccess-only
2026-07-11 01:32:16,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:32:16,542 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:32:16,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None
2026-07-11 01:32:17,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/196 HTTP/1.1" 200 None
2026-07-11 01:32:18,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4b6b6631fecc40049c3c8721846ed61c7868a1de?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:18,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4b6b6631fecc40049c3c8721846ed61c7868a1de/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:32:19,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4b6b6631fecc40049c3c8721846ed61c7868a1de/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:32:19,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/194 HTTP/1.1" 200 None
2026-07-11 01:32:20,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:20,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:32:21,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:32:21,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None
2026-07-11 01:32:22,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:22,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:32:23,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:32:23,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:24,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None
2026-07-11 01:32:24,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:25,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None
2026-07-11 01:32:25,169 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated'
2026-07-11 01:32:25,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None
2026-07-11 01:32:26,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None
2026-07-11 01:32:26,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:27,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:32:27,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:32:28,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:28,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None
2026-07-11 01:32:29,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:29,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None
2026-07-11 01:32:29,567 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"'
2026-07-11 01:32:30,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None
2026-07-11 01:32:32,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None
2026-07-11 01:32:33,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None
2026-07-11 01:32:33,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None
2026-07-11 01:32:34,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:34,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:32:35,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:32:35,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:36,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None
2026-07-11 01:32:36,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:37,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None
2026-07-11 01:32:37,118 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2026-07-11 01:32:37,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None
2026-07-11 01:32:38,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None
2026-07-11 01:32:38,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:39,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:32:39,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:32:40,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:40,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None
2026-07-11 01:32:41,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None
2026-07-11 01:32:41,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None
2026-07-11 01:32:41,735 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells'
2026-07-11 01:32:42,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None
2026-07-11 01:32:42,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None
2026-07-11 01:32:43,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None
2026-07-11 01:32:43,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None
2026-07-11 01:32:44,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None
2026-07-11 01:32:44,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None
2026-07-11 01:32:44,583 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:32:44,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2026-07-11 01:32:44,584 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:32:44,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:32:44,607 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:32:44,626 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:32:44,626 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:32:44,701 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:32:45,176 [ scc.git] DEBUG Updating 11d3587..9f844b8
2026-07-11 01:32:45,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None
2026-07-11 01:32:46,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None
2026-07-11 01:32:47,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None
2026-07-11 01:32:48,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None
2026-07-11 01:32:49,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None
2026-07-11 01:32:49,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None
2026-07-11 01:32:50,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None
2026-07-11 01:32:51,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None
2026-07-11 01:32:52,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None
2026-07-11 01:32:52,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None
2026-07-11 01:32:53,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None
2026-07-11 01:32:54,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None
2026-07-11 01:32:54,462 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head'
2026-07-11 01:32:55,209 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2026-07-11 01:32:55,209 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD
2026-07-11 01:32:55,234 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head'
2026-07-11 01:32:55,803 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2026-07-11 01:32:55,803 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD
2026-07-11 01:32:55,829 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head'
2026-07-11 01:32:56,296 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2026-07-11 01:32:56,296 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD
2026-07-11 01:32:56,321 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head'
2026-07-11 01:32:56,734 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2026-07-11 01:32:56,734 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD
2026-07-11 01:32:56,759 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:32:56,760 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:32:56,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:32:56,777 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c'
2026-07-11 01:32:56,830 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:32:56,845 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c'
2026-07-11 01:32:57,289 [ scc.git] DEBUG Auto-merging README.rst
2026-07-11 01:32:57,289 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py
2026-07-11 01:32:57,289 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py
2026-07-11 01:32:57,289 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2026-07-11 01:32:57,289 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py
2026-07-11 01:32:57,289 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py
2026-07-11 01:32:57,289 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py
2026-07-11 01:32:57,289 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py
2026-07-11 01:32:57,289 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py
2026-07-11 01:32:57,289 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py
2026-07-11 01:32:57,289 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py
2026-07-11 01:32:57,311 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-07-11 01:32:57,312 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-07-11 01:32:57,342 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec'
2026-07-11 01:32:57,518 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0
2026-07-11 01:32:57,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:32:57,705 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c'
2026-07-11 01:32:57,739 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec'
2026-07-11 01:32:57,758 [ scc.git] INFO - PR 174 will-moore 'Skip wells'
Conflicting PR. Removed from build [OMERO-plugins-push#5](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_zarr/raw_pixels.py
- src/omero_zarr/cli.py
- src/omero_zarr/masks.py
- src/omero_zarr/util.py
- test/integration/clitest/test_export.py
--conflicts
2026-07-11 01:32:57,769 [ scc.config] DEBUG Found github.token
2026-07-11 01:32:57,769 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts.
2026-07-11 01:32:57,769 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae'
2026-07-11 01:32:57,810 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:32:57,824 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae'
2026-07-11 01:32:58,053 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2026-07-11 01:32:58,053 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py
2026-07-11 01:32:58,053 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py
2026-07-11 01:32:58,053 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py
2026-07-11 01:32:58,080 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-07-11 01:32:58,082 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-07-11 01:32:58,109 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec'
2026-07-11 01:32:58,248 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0
2026-07-11 01:32:58,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:32:58,446 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae'
2026-07-11 01:32:58,486 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec'
2026-07-11 01:32:58,509 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Conflicting PR. Removed from build [OMERO-plugins-push#5](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/consoleText) for more details.
Possible conflicts:
- PR #174 will-moore 'Skip wells'
- src/omero_zarr/masks.py
- test/integration/clitest/test_export.py
- Upstream changes
- src/omero_zarr/masks.py
- test/integration/clitest/test_export.py
--conflicts
2026-07-11 01:32:58,523 [ scc.config] DEBUG Found github.token
2026-07-11 01:32:58,523 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts.
2026-07-11 01:32:58,523 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac'
2026-07-11 01:32:58,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:32:58,576 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac'
2026-07-11 01:32:58,823 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py
2026-07-11 01:32:58,823 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py
2026-07-11 01:32:58,823 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py
2026-07-11 01:32:58,823 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py
2026-07-11 01:32:58,824 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py
2026-07-11 01:32:58,854 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-07-11 01:32:58,855 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-07-11 01:32:58,885 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec'
2026-07-11 01:32:59,039 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0
2026-07-11 01:32:59,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:32:59,369 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac'
2026-07-11 01:32:59,397 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec'
2026-07-11 01:32:59,411 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"'
Conflicting PR. Removed from build [OMERO-plugins-push#5](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/consoleText) for more details.
Possible conflicts:
- Upstream changes
- test/integration/clitest/test_import.py
- src/omero_zarr/zarr_import.py
--conflicts
2026-07-11 01:32:59,421 [ scc.config] DEBUG Found github.token
2026-07-11 01:32:59,421 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts.
2026-07-11 01:32:59,421 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c'
2026-07-11 01:32:59,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:32:59,454 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c'
2026-07-11 01:32:59,621 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:32:59,683 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++
2026-07-11 01:32:59,683 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++-------------------
2026-07-11 01:32:59,683 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-)
2026-07-11 01:32:59,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:32:59,860 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:32:59,962 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:32:59,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:32:59,973 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:33:00,062 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:33:00,113 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6c815090> has no local changes
2026-07-11 01:33:00,114 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 196 will-moore 'Storage options only if needed' (status: failure)
- PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure)
- PR 181 will-moore 'Add labels support for import' (exclude comment)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..9f844b8
Previously merged:
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- PR 192 jburel 'Set Omero pixel size'
- PR 186 jburel 'Create release from tag'
- PR 187 dominikl 'Fix target-by-name option'
- PR 180 will-moore 'Import command'
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 193 dominikl 'Only parse import uris if stated'
Conflicting PRs (not included):
- PR 174 will-moore 'Skip wells'
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
- PR 182 will-moore 'Revert "Remove support for Plate import"'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:33:00,238 [ scc.git] DEBUG [detached HEAD 30e5cc1] merge master -Dorg -Ssuccess-only
2026-07-11 01:33:00,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:33:00,239 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:33:00,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None
2026-07-11 01:33:01,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/694 HTTP/1.1" 200 None
2026-07-11 01:33:01,121 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:33:01,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ed470277e5ac8780e9692b8170dd3204e04fcacb?page=1 HTTP/1.1" 200 None
2026-07-11 01:33:02,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ed470277e5ac8780e9692b8170dd3204e04fcacb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:33:02,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ed470277e5ac8780e9692b8170dd3204e04fcacb/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:33:03,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ed470277e5ac8780e9692b8170dd3204e04fcacb?page=1 HTTP/1.1" 200 None
2026-07-11 01:33:03,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ed470277e5ac8780e9692b8170dd3204e04fcacb?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:33:03,808 [ scc.repo] DEBUG - PR 694 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.11'
2026-07-11 01:33:04,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/692 HTTP/1.1" 200 None
2026-07-11 01:33:04,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2?page=1 HTTP/1.1" 200 None
2026-07-11 01:33:05,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:33:06,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:33:06,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2?page=1 HTTP/1.1" 200 None
2026-07-11 01:33:06,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/123f30064dc116c09098786206e54f8ec811c2c2?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:33:06,961 [ scc.repo] DEBUG - PR 692 will-moore 'colorbar lut background fix'
2026-07-11 01:33:07,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None
2026-07-11 01:33:08,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None
2026-07-11 01:33:08,019 [ scc.repo] DEBUG # ... Include label: include
2026-07-11 01:33:08,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None
2026-07-11 01:33:09,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:33:09,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:33:10,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None
2026-07-11 01:33:10,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:33:10,742 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 '
2026-07-11 01:33:10,742 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:33:10,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2026-07-11 01:33:10,743 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:33:10,743 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:33:10,765 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:33:10,785 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:33:10,785 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:33:10,863 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:33:12,391 [ scc.git] ERROR stderr (git merge --ff-only origin/master): Updating files: 89% (73/82)
Updating files: 90% (74/82)
Updating files: 91% (75/82)
Updating files: 92% (76/82)
Updating files: 93% (77/82)
Updating files: 95% (78/82)
Updating files: 96% (79/82)
Updating files: 97% (80/82)
Updating files: 98% (81/82)
Updating files: 100% (82/82)
Updating files: 100% (82/82), done.
2026-07-11 01:33:12,391 [ scc.git] DEBUG Updating 9cc36cde..18887279
2026-07-11 01:33:12,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/693 HTTP/1.1" 200 None
2026-07-11 01:33:13,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/691 HTTP/1.1" 200 None
2026-07-11 01:33:14,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/686 HTTP/1.1" 200 None
2026-07-11 01:33:15,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/690 HTTP/1.1" 200 None
2026-07-11 01:33:15,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/681 HTTP/1.1" 200 None
2026-07-11 01:33:16,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/688 HTTP/1.1" 200 None
2026-07-11 01:33:17,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/685 HTTP/1.1" 200 None
2026-07-11 01:33:18,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/683 HTTP/1.1" 200 None
2026-07-11 01:33:19,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/680 HTTP/1.1" 200 None
2026-07-11 01:33:19,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/684 HTTP/1.1" 200 None
2026-07-11 01:33:20,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/682 HTTP/1.1" 200 None
2026-07-11 01:33:21,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/679 HTTP/1.1" 200 None
2026-07-11 01:33:22,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/677 HTTP/1.1" 200 None
2026-07-11 01:33:22,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/666 HTTP/1.1" 200 None
2026-07-11 01:33:23,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/676 HTTP/1.1" 200 None
2026-07-11 01:33:24,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/669 HTTP/1.1" 200 None
2026-07-11 01:33:25,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/662 HTTP/1.1" 200 None
2026-07-11 01:33:26,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/663 HTTP/1.1" 200 None
2026-07-11 01:33:26,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None
2026-07-11 01:33:27,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None
2026-07-11 01:33:28,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None
2026-07-11 01:33:29,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None
2026-07-11 01:33:29,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None
2026-07-11 01:33:30,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None
2026-07-11 01:33:31,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None
2026-07-11 01:33:32,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None
2026-07-11 01:33:32,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None
2026-07-11 01:33:33,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None
2026-07-11 01:33:34,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None
2026-07-11 01:33:35,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None
2026-07-11 01:33:36,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None
2026-07-11 01:33:36,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None
2026-07-11 01:33:37,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None
2026-07-11 01:33:38,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None
2026-07-11 01:33:39,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None
2026-07-11 01:33:40,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None
2026-07-11 01:33:40,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None
2026-07-11 01:33:41,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None
2026-07-11 01:33:42,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None
2026-07-11 01:33:43,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None
2026-07-11 01:33:44,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None
2026-07-11 01:33:44,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None
2026-07-11 01:33:45,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None
2026-07-11 01:33:46,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None
2026-07-11 01:33:47,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None
2026-07-11 01:33:48,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None
2026-07-11 01:33:48,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None
2026-07-11 01:33:49,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None
2026-07-11 01:33:50,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None
2026-07-11 01:33:51,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None
2026-07-11 01:33:51,147 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head'
2026-07-11 01:33:51,752 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2026-07-11 01:33:51,753 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD
2026-07-11 01:33:51,776 [ scc.git] DEBUG Calling 'git fetch origin pull/692/head'
2026-07-11 01:33:52,193 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2026-07-11 01:33:52,193 [ scc.git] DEBUG * branch refs/pull/692/head -> FETCH_HEAD
2026-07-11 01:33:52,213 [ scc.git] DEBUG Calling 'git fetch origin pull/694/head'
2026-07-11 01:33:52,592 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2026-07-11 01:33:52,592 [ scc.git] DEBUG * branch refs/pull/694/head -> FETCH_HEAD
2026-07-11 01:33:52,619 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:33:52,619 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:33:52,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:33:52,632 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234'
2026-07-11 01:33:52,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:33:52,702 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234'
2026-07-11 01:33:53,109 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2026-07-11 01:33:53,109 [ scc.git] DEBUG Auto-merging src/index.html
2026-07-11 01:33:53,109 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js
2026-07-11 01:33:53,174 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:33:53,244 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++-
2026-07-11 01:33:53,244 [ scc.git] DEBUG src/index.html | 11 ++
2026-07-11 01:33:53,244 [ scc.git] DEBUG src/js/views/figure_view.js | 1 +
2026-07-11 01:33:53,244 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-)
2026-07-11 01:33:53,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:33:53,422 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...123f30064dc116c09098786206e54f8ec811c2c2'
2026-07-11 01:33:53,470 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:33:53,483 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 692 (colorbar lut background fix) 123f30064dc116c09098786206e54f8ec811c2c2'
2026-07-11 01:33:53,734 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:33:53,812 [ scc.git] DEBUG src/js/views/panel_view.js | 5 +++++
2026-07-11 01:33:53,812 [ scc.git] DEBUG src/templates/colorbar.template.html | 2 +-
2026-07-11 01:33:53,812 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 1 deletion(-)
2026-07-11 01:33:53,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:33:53,989 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed470277e5ac8780e9692b8170dd3204e04fcacb'
2026-07-11 01:33:54,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:33:54,047 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 694 (Bump dompurify from 3.4.9 to 3.4.11) ed470277e5ac8780e9692b8170dd3204e04fcacb'
2026-07-11 01:33:54,287 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:33:54,355 [ scc.git] DEBUG package-lock.json | 8 ++++----
2026-07-11 01:33:54,355 [ scc.git] DEBUG package.json | 2 +-
2026-07-11 01:33:54,355 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-)
2026-07-11 01:33:54,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:33:54,685 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:33:54,813 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:33:54,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:33:54,827 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:33:54,942 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:33:55,054 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6c40aad0> has no local changes
2026-07-11 01:33:55,054 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-figure
Updating 9cc36cde..18887279
Previously merged:
- PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9'
- PR 691 dependabot[bot] 'Bump esbuild and vite'
- PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images'
- PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15'
- PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0'
- PR 688 will-moore 'app handles ?image=1 without needing /new?image=1'
- PR 685 will-moore 'Fix static files links for release build'
- PR 683 will-moore 'Add touch support for clicking on single panel'
- PR 680 will-moore 'Use --pre install for export script in README'
- PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml'
- PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi'
- PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs'
- PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2'
- PR 666 will-moore 'Standalone app'
- PR 676 dependabot[bot] 'Bump picomatch'
- PR 669 will-moore 'Standalone python script'
- PR 662 will-moore 'Export script handles OME-zarr images'
- PR 663 will-moore 'Zarr'
- PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8'
- PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2'
- PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8'
- PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues'
- PR 667 Tom-TBT 'Label suggestion interface'
- PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID'
- PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO'
- PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0'
- PR 664 Nirkan 'Handle many channels '
- PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes'
- PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540'
- PR 661 Rdornier 'Align to grid - check if panels are already in the grid'
- PR 649 jburel 'Replace manual changelog by automated GH release step'
- PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout'
- PR 637 Rdornier 'Fix scalebar position'
- PR 600 Rdornier 'Label on rois'
- PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles'
- PR 651 Rdornier 'More compliant align to grid'
- PR 650 jburel 'Bump Python version'
- PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
- PR 646 JensWendt 'fix word wrap of image names'
- PR 612 will-moore 'Script version'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 616 Rdornier 'Fix labels around border'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 '
- PR 692 will-moore 'colorbar lut background fix'
- PR 694 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.11'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:33:55,228 [ scc.git] DEBUG [detached HEAD d63287d4] merge master -Dorg -Ssuccess-only
2026-07-11 01:33:55,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:33:55,230 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:33:55,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2026-07-11 01:33:56,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None
2026-07-11 01:33:56,011 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:33:56,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None
2026-07-11 01:33:57,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:33:57,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:33:58,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None
2026-07-11 01:33:58,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:33:58,698 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:33:59,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2026-07-11 01:33:59,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2026-07-11 01:34:00,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:00,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:34:01,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:01,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:34:01,641 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2026-07-11 01:34:01,641 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:34:01,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2026-07-11 01:34:01,642 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:34:01,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:34:01,664 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:34:01,685 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:34:01,685 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:34:01,705 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:34:01,760 [ scc.git] DEBUG Already up to date.
2026-07-11 01:34:01,760 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2026-07-11 01:34:02,200 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2026-07-11 01:34:02,200 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2026-07-11 01:34:02,227 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head'
2026-07-11 01:34:02,642 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2026-07-11 01:34:02,642 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD
2026-07-11 01:34:02,666 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:34:02,666 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:34:02,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:34:02,681 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2026-07-11 01:34:02,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:34:02,721 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2026-07-11 01:34:02,893 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2026-07-11 01:34:03,006 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:34:03,079 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2026-07-11 01:34:03,079 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2026-07-11 01:34:03,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:34:03,260 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c'
2026-07-11 01:34:03,290 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:34:03,315 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c'
2026-07-11 01:34:03,498 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:34:03,557 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-07-11 01:34:03,557 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-07-11 01:34:03,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:34:03,737 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:34:03,861 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:34:03,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:34:03,908 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:34:04,025 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:34:04,088 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6c319790> has no local changes
2026-07-11 01:34:04,088 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
- PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:34:04,228 [ scc.git] DEBUG [detached HEAD ce25a56] merge master -Dorg -Ssuccess-only
2026-07-11 01:34:04,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:34:04,229 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:34:04,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2026-07-11 01:34:05,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None
2026-07-11 01:34:05,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None
2026-07-11 01:34:06,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None
2026-07-11 01:34:06,115 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:34:06,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:07,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:34:07,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:08,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:34:08,325 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2026-07-11 01:34:08,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None
2026-07-11 01:34:09,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None
2026-07-11 01:34:09,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None
2026-07-11 01:34:09,892 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:34:10,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:11,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:34:11,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:11,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:34:11,966 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2026-07-11 01:34:12,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None
2026-07-11 01:34:12,431 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:34:13,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:13,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:34:14,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:14,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:34:14,498 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2026-07-11 01:34:14,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None
2026-07-11 01:34:14,970 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:34:15,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:16,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:34:16,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:17,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:34:17,046 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2026-07-11 01:34:17,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None
2026-07-11 01:34:18,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None
2026-07-11 01:34:18,200 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:34:18,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:19,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:34:19,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:20,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:34:20,266 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2026-07-11 01:34:20,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None
2026-07-11 01:34:20,731 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:34:21,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:21,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:34:22,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:22,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:34:22,785 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents'
2026-07-11 01:34:23,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None
2026-07-11 01:34:23,256 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:34:23,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:24,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:34:24,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:25,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:34:25,276 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2026-07-11 01:34:25,276 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:34:25,276 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2026-07-11 01:34:25,277 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:34:25,277 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:34:25,296 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:34:25,316 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:34:25,316 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:34:25,336 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:34:25,433 [ scc.git] DEBUG Already up to date.
2026-07-11 01:34:25,433 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head'
2026-07-11 01:34:25,821 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2026-07-11 01:34:25,822 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD
2026-07-11 01:34:25,848 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head'
2026-07-11 01:34:26,246 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2026-07-11 01:34:26,246 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD
2026-07-11 01:34:26,270 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head'
2026-07-11 01:34:26,668 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2026-07-11 01:34:26,668 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD
2026-07-11 01:34:26,694 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head'
2026-07-11 01:34:27,086 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2026-07-11 01:34:27,086 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD
2026-07-11 01:34:27,110 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head'
2026-07-11 01:34:27,508 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2026-07-11 01:34:27,508 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD
2026-07-11 01:34:27,527 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head'
2026-07-11 01:34:27,894 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2026-07-11 01:34:27,894 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD
2026-07-11 01:34:27,914 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head'
2026-07-11 01:34:28,295 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2026-07-11 01:34:28,295 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD
2026-07-11 01:34:28,316 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:34:28,317 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:34:28,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:34:28,331 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2026-07-11 01:34:28,354 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:34:28,369 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2026-07-11 01:34:28,646 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:34:28,703 [ scc.git] DEBUG package-lock.json | 12 ++++++------
2026-07-11 01:34:28,703 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-)
2026-07-11 01:34:28,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:34:28,895 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b'
2026-07-11 01:34:28,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:34:28,929 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b'
2026-07-11 01:34:29,069 [ scc.git] DEBUG Auto-merging package-lock.json
2026-07-11 01:34:29,134 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:34:29,197 [ scc.git] DEBUG package-lock.json | 625 +++---------------------------------------------------
2026-07-11 01:34:29,197 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-)
2026-07-11 01:34:29,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:34:29,388 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2026-07-11 01:34:29,417 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:34:29,430 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2026-07-11 01:34:29,629 [ scc.git] DEBUG Auto-merging package-lock.json
2026-07-11 01:34:29,629 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2026-07-11 01:34:29,654 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-07-11 01:34:29,655 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-07-11 01:34:29,683 [ scc.git] DEBUG Calling 'git reset --hard 637fa27c58270b42dbc68a41df8754500d54d9f3'
2026-07-11 01:34:29,816 [ scc.git] DEBUG HEAD is now at 637fa27 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents)
2026-07-11 01:34:30,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:34:30,016 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2026-07-11 01:34:30,039 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2026-07-11 01:34:30,058 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#5](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
--conflicts
2026-07-11 01:34:30,069 [ scc.config] DEBUG Found github.token
2026-07-11 01:34:30,070 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts.
2026-07-11 01:34:30,070 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2026-07-11 01:34:30,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:34:30,104 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2026-07-11 01:34:30,253 [ scc.git] DEBUG Auto-merging package-lock.json
2026-07-11 01:34:30,328 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:34:30,393 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++-----
2026-07-11 01:34:30,393 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-)
2026-07-11 01:34:30,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:34:30,591 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c'
2026-07-11 01:34:30,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:34:30,639 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c'
2026-07-11 01:34:30,778 [ scc.git] DEBUG Auto-merging package-lock.json
2026-07-11 01:34:30,846 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:34:30,908 [ scc.git] DEBUG package-lock.json | 6 +++---
2026-07-11 01:34:30,909 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2026-07-11 01:34:31,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:34:31,101 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2026-07-11 01:34:31,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:34:31,145 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2026-07-11 01:34:31,304 [ scc.git] DEBUG Auto-merging package-lock.json
2026-07-11 01:34:31,305 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2026-07-11 01:34:31,328 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-07-11 01:34:31,329 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-07-11 01:34:31,358 [ scc.git] DEBUG Calling 'git reset --hard 663ef5358323795b7587ae3f3c4ca9303febf482'
2026-07-11 01:34:31,510 [ scc.git] DEBUG HEAD is now at 663ef53 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2026-07-11 01:34:31,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:34:31,708 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2026-07-11 01:34:31,729 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2026-07-11 01:34:31,746 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#5](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
--conflicts
2026-07-11 01:34:31,757 [ scc.config] DEBUG Found github.token
2026-07-11 01:34:31,757 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts.
2026-07-11 01:34:31,757 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062'
2026-07-11 01:34:31,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:34:31,792 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062'
2026-07-11 01:34:31,947 [ scc.git] DEBUG Auto-merging package-lock.json
2026-07-11 01:34:31,947 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2026-07-11 01:34:31,970 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-07-11 01:34:31,971 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-07-11 01:34:31,996 [ scc.git] DEBUG Calling 'git reset --hard 663ef5358323795b7587ae3f3c4ca9303febf482'
2026-07-11 01:34:32,120 [ scc.git] DEBUG HEAD is now at 663ef53 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2026-07-11 01:34:32,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:34:32,302 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062'
2026-07-11 01:34:32,323 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2026-07-11 01:34:32,344 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#5](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
- PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- package-lock.json
--conflicts
2026-07-11 01:34:32,358 [ scc.config] DEBUG Found github.token
2026-07-11 01:34:32,358 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts.
2026-07-11 01:34:32,358 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:34:32,476 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:34:32,476 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:34:32,490 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:34:32,597 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:34:32,673 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6c324910> has no local changes
2026-07-11 01:34:32,673 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:34:32,818 [ scc.git] DEBUG [detached HEAD 64d700a] merge master -Dorg -Ssuccess-only
2026-07-11 01:34:32,819 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:34:32,819 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:34:33,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2026-07-11 01:34:33,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/546 HTTP/1.1" 200 None
2026-07-11 01:34:34,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:34,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:34:35,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:34:35,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:36,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:34:36,315 [ scc.repo] DEBUG - PR 546 will-moore 'Use POST data for saveImgRdef params'
2026-07-11 01:34:36,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/544 HTTP/1.1" 200 None
2026-07-11 01:34:37,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/544/comments HTTP/1.1" 200 None
2026-07-11 01:34:37,251 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:34:37,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b9d6befc6684104960c2906702c2eb687dc1e851?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:38,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b9d6befc6684104960c2906702c2eb687dc1e851/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:34:38,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b9d6befc6684104960c2906702c2eb687dc1e851/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:34:39,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b9d6befc6684104960c2906702c2eb687dc1e851?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:39,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b9d6befc6684104960c2906702c2eb687dc1e851?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:34:39,893 [ scc.repo] DEBUG - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint'
2026-07-11 01:34:40,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/543 HTTP/1.1" 200 None
2026-07-11 01:34:40,353 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:34:40,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/94c91a556df29d493ef65c47a023f6de724c0004?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:41,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/94c91a556df29d493ef65c47a023f6de724c0004/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:34:42,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/94c91a556df29d493ef65c47a023f6de724c0004/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:34:42,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/94c91a556df29d493ef65c47a023f6de724c0004?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:43,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/94c91a556df29d493ef65c47a023f6de724c0004?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:34:43,140 [ scc.repo] DEBUG - PR 543 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.5'
2026-07-11 01:34:43,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/541 HTTP/1.1" 200 None
2026-07-11 01:34:44,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/83cb921ccbf7bc394ef317de7cb767468ae7eaad?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:44,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/83cb921ccbf7bc394ef317de7cb767468ae7eaad/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:34:45,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/83cb921ccbf7bc394ef317de7cb767468ae7eaad/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:34:45,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/83cb921ccbf7bc394ef317de7cb767468ae7eaad?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:46,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/83cb921ccbf7bc394ef317de7cb767468ae7eaad?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:34:46,136 [ scc.repo] DEBUG - PR 541 will-moore 'Only add channel to tile request string if active'
2026-07-11 01:34:46,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/540 HTTP/1.1" 200 None
2026-07-11 01:34:46,588 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:34:47,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c568a324264b0d49ff3d53f75024eca7482de94b?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:47,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c568a324264b0d49ff3d53f75024eca7482de94b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:34:48,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c568a324264b0d49ff3d53f75024eca7482de94b/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:34:48,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c568a324264b0d49ff3d53f75024eca7482de94b?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:49,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/c568a324264b0d49ff3d53f75024eca7482de94b?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:34:49,413 [ scc.repo] DEBUG - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6'
2026-07-11 01:34:49,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/539 HTTP/1.1" 200 None
2026-07-11 01:34:49,872 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:34:50,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0f0014ac7a6b5a5423c4d298541516407fd6d3cb?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:51,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0f0014ac7a6b5a5423c4d298541516407fd6d3cb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:34:51,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0f0014ac7a6b5a5423c4d298541516407fd6d3cb/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:34:52,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0f0014ac7a6b5a5423c4d298541516407fd6d3cb?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:52,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/0f0014ac7a6b5a5423c4d298541516407fd6d3cb?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:34:52,566 [ scc.repo] DEBUG - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter'
2026-07-11 01:34:53,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/537 HTTP/1.1" 200 None
2026-07-11 01:34:53,040 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:34:53,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/16a64815dd14cc424f6ac8b24630b37ccfd0c282?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:54,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/16a64815dd14cc424f6ac8b24630b37ccfd0c282/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:34:54,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/16a64815dd14cc424f6ac8b24630b37ccfd0c282/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:34:55,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/16a64815dd14cc424f6ac8b24630b37ccfd0c282?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:55,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/16a64815dd14cc424f6ac8b24630b37ccfd0c282?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:34:55,772 [ scc.repo] DEBUG - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1'
2026-07-11 01:34:56,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/536 HTTP/1.1" 200 None
2026-07-11 01:34:56,281 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:34:56,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9e3d6f94ebb795775ec87353d3d2bb4d678e6e51?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:57,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9e3d6f94ebb795775ec87353d3d2bb4d678e6e51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:34:57,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9e3d6f94ebb795775ec87353d3d2bb4d678e6e51/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:34:58,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9e3d6f94ebb795775ec87353d3d2bb4d678e6e51?page=1 HTTP/1.1" 200 None
2026-07-11 01:34:58,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/9e3d6f94ebb795775ec87353d3d2bb4d678e6e51?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:34:58,804 [ scc.repo] DEBUG - PR 536 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.8.4'
2026-07-11 01:34:59,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/535 HTTP/1.1" 200 None
2026-07-11 01:34:59,266 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:34:59,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79?page=1 HTTP/1.1" 200 None
2026-07-11 01:35:00,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:35:00,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:35:01,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79?page=1 HTTP/1.1" 200 None
2026-07-11 01:35:01,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/46500d0a497fc9945eeca87fd36672b2bf8d6e79?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:35:01,978 [ scc.repo] DEBUG - PR 535 dependabot[bot] 'Bump tmp and eslint'
2026-07-11 01:35:02,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532 HTTP/1.1" 200 None
2026-07-11 01:35:02,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532/comments HTTP/1.1" 200 None
2026-07-11 01:35:03,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c7486c99bcafcc13a371ace8662ade061c1eccf8?page=1 HTTP/1.1" 200 None
2026-07-11 01:35:03,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c7486c99bcafcc13a371ace8662ade061c1eccf8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:35:04,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c7486c99bcafcc13a371ace8662ade061c1eccf8/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:35:04,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c7486c99bcafcc13a371ace8662ade061c1eccf8?page=1 HTTP/1.1" 200 None
2026-07-11 01:35:05,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/c7486c99bcafcc13a371ace8662ade061c1eccf8?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:35:05,435 [ scc.repo] DEBUG - PR 532 will-moore 'Zarr layers'
2026-07-11 01:35:05,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/527 HTTP/1.1" 200 None
2026-07-11 01:35:06,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/527/comments HTTP/1.1" 200 None
2026-07-11 01:35:06,422 [ scc.repo] DEBUG # ... Include label: include
2026-07-11 01:35:07,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/71de5adbbf9910cefb3e4a49bff107673d9b5527?page=1 HTTP/1.1" 200 None
2026-07-11 01:35:07,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/71de5adbbf9910cefb3e4a49bff107673d9b5527/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:35:08,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/71de5adbbf9910cefb3e4a49bff107673d9b5527/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:35:08,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None
2026-07-11 01:35:08,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511/comments HTTP/1.1" 200 None
2026-07-11 01:35:09,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None
2026-07-11 01:35:09,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None
2026-07-11 01:35:10,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None
2026-07-11 01:35:10,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2026-07-11 01:35:11,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2026-07-11 01:35:11,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2026-07-11 01:35:12,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2026-07-11 01:35:12,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None
2026-07-11 01:35:13,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:35:13,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None
2026-07-11 01:35:14,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:35:14,588 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2026-07-11 01:35:15,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None
2026-07-11 01:35:15,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None
2026-07-11 01:35:16,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97?page=1 HTTP/1.1" 200 None
2026-07-11 01:35:16,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:35:17,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97?page=1 HTTP/1.1" 200 None
2026-07-11 01:35:17,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/a081a9f2892763bd49a7ad7ba425965150e76f97?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:35:17,482 [ scc.repo] DEBUG - PR 227 will-moore 'Vectortile investigation'
2026-07-11 01:35:17,482 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:35:17,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2026-07-11 01:35:17,483 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:35:17,484 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:35:17,509 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:35:17,530 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:35:17,530 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:35:17,632 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:35:18,170 [ scc.git] DEBUG Updating 7a798cee..cae0b026
2026-07-11 01:35:18,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/534 HTTP/1.1" 200 None
2026-07-11 01:35:19,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/533 HTTP/1.1" 200 None
2026-07-11 01:35:20,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/530 HTTP/1.1" 200 None
2026-07-11 01:35:20,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/528 HTTP/1.1" 200 None
2026-07-11 01:35:21,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/529 HTTP/1.1" 200 None
2026-07-11 01:35:22,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/526 HTTP/1.1" 200 None
2026-07-11 01:35:23,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/525 HTTP/1.1" 200 None
2026-07-11 01:35:23,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/524 HTTP/1.1" 200 None
2026-07-11 01:35:24,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/523 HTTP/1.1" 200 None
2026-07-11 01:35:25,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/522 HTTP/1.1" 200 None
2026-07-11 01:35:26,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/521 HTTP/1.1" 200 None
2026-07-11 01:35:26,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/520 HTTP/1.1" 200 None
2026-07-11 01:35:27,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/519 HTTP/1.1" 200 None
2026-07-11 01:35:28,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/518 HTTP/1.1" 200 None
2026-07-11 01:35:29,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/514 HTTP/1.1" 200 None
2026-07-11 01:35:29,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/513 HTTP/1.1" 200 None
2026-07-11 01:35:30,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/512 HTTP/1.1" 200 None
2026-07-11 01:35:31,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/465 HTTP/1.1" 200 None
2026-07-11 01:35:32,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/517 HTTP/1.1" 200 None
2026-07-11 01:35:32,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/516 HTTP/1.1" 200 None
2026-07-11 01:35:33,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None
2026-07-11 01:35:34,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None
2026-07-11 01:35:34,460 [ scc.git] DEBUG Calling 'git fetch origin pull/227/head'
2026-07-11 01:35:34,909 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-07-11 01:35:34,910 [ scc.git] DEBUG * branch refs/pull/227/head -> FETCH_HEAD
2026-07-11 01:35:34,974 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2026-07-11 01:35:35,429 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-07-11 01:35:35,429 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2026-07-11 01:35:35,454 [ scc.git] DEBUG Calling 'git fetch origin pull/532/head'
2026-07-11 01:35:35,857 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-07-11 01:35:35,857 [ scc.git] DEBUG * branch refs/pull/532/head -> FETCH_HEAD
2026-07-11 01:35:35,880 [ scc.git] DEBUG Calling 'git fetch origin pull/535/head'
2026-07-11 01:35:36,291 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-07-11 01:35:36,292 [ scc.git] DEBUG * branch refs/pull/535/head -> FETCH_HEAD
2026-07-11 01:35:36,318 [ scc.git] DEBUG Calling 'git fetch origin pull/536/head'
2026-07-11 01:35:36,713 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-07-11 01:35:36,713 [ scc.git] DEBUG * branch refs/pull/536/head -> FETCH_HEAD
2026-07-11 01:35:36,775 [ scc.git] DEBUG Calling 'git fetch origin pull/537/head'
2026-07-11 01:35:37,168 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-07-11 01:35:37,168 [ scc.git] DEBUG * branch refs/pull/537/head -> FETCH_HEAD
2026-07-11 01:35:37,198 [ scc.git] DEBUG Calling 'git fetch origin pull/539/head'
2026-07-11 01:35:37,592 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-07-11 01:35:37,592 [ scc.git] DEBUG * branch refs/pull/539/head -> FETCH_HEAD
2026-07-11 01:35:37,614 [ scc.git] DEBUG Calling 'git fetch origin pull/540/head'
2026-07-11 01:35:38,012 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-07-11 01:35:38,013 [ scc.git] DEBUG * branch refs/pull/540/head -> FETCH_HEAD
2026-07-11 01:35:38,041 [ scc.git] DEBUG Calling 'git fetch origin pull/541/head'
2026-07-11 01:35:38,459 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-07-11 01:35:38,459 [ scc.git] DEBUG * branch refs/pull/541/head -> FETCH_HEAD
2026-07-11 01:35:38,486 [ scc.git] DEBUG Calling 'git fetch origin pull/543/head'
2026-07-11 01:35:38,872 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-07-11 01:35:38,872 [ scc.git] DEBUG * branch refs/pull/543/head -> FETCH_HEAD
2026-07-11 01:35:38,898 [ scc.git] DEBUG Calling 'git fetch origin pull/544/head'
2026-07-11 01:35:39,293 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-07-11 01:35:39,293 [ scc.git] DEBUG * branch refs/pull/544/head -> FETCH_HEAD
2026-07-11 01:35:39,320 [ scc.git] DEBUG Calling 'git fetch origin pull/546/head'
2026-07-11 01:35:39,716 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-07-11 01:35:39,716 [ scc.git] DEBUG * branch refs/pull/546/head -> FETCH_HEAD
2026-07-11 01:35:39,741 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:35:39,741 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:35:39,741 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:35:39,757 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a081a9f2892763bd49a7ad7ba425965150e76f97'
2026-07-11 01:35:39,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:35:39,807 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 227 (Vectortile investigation) a081a9f2892763bd49a7ad7ba425965150e76f97'
2026-07-11 01:35:40,207 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2026-07-11 01:35:40,207 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2026-07-11 01:35:40,207 [ scc.git] DEBUG Auto-merging src/viewers/ol3-viewer.js
2026-07-11 01:35:40,276 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:35:40,365 [ scc.git] DEBUG plugin/omero_iviewer/urls.py | 7 +-
2026-07-11 01:35:40,365 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 88 ++++++++++
2026-07-11 01:35:40,366 [ scc.git] DEBUG src/events/events.js | 2 +
2026-07-11 01:35:40,366 [ scc.git] DEBUG src/model/regions_info.js | 37 +++-
2026-07-11 01:35:40,366 [ scc.git] DEBUG src/regions/regions-list.js | 26 +++
2026-07-11 01:35:40,366 [ scc.git] DEBUG src/utils/constants.js | 6 +
2026-07-11 01:35:40,366 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 48 +++++-
2026-07-11 01:35:40,366 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 78 +++++++--
2026-07-11 01:35:40,366 [ scc.git] DEBUG src/viewers/viewer/format/OmeJSON.js | 79 +++++++++
2026-07-11 01:35:40,366 [ scc.git] DEBUG src/viewers/viewer/source/Regions.js | 56 ++++++
2026-07-11 01:35:40,366 [ scc.git] DEBUG src/viewers/viewer/source/TiledRegions.js | 277 ++++++++++++++++++++++++++++++
2026-07-11 01:35:40,366 [ scc.git] DEBUG src/viewers/viewer/utils/Regions.js | 51 ++++--
2026-07-11 01:35:40,366 [ scc.git] DEBUG src/viewers/viewer/utils/Style.js | 19 +-
2026-07-11 01:35:40,366 [ scc.git] DEBUG 13 files changed, 727 insertions(+), 47 deletions(-)
2026-07-11 01:35:40,366 [ scc.git] DEBUG create mode 100644 src/viewers/viewer/format/OmeJSON.js
2026-07-11 01:35:40,366 [ scc.git] DEBUG create mode 100644 src/viewers/viewer/source/TiledRegions.js
2026-07-11 01:35:40,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:35:40,545 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2026-07-11 01:35:40,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:35:40,607 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2026-07-11 01:35:40,895 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2026-07-11 01:35:40,989 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:35:41,079 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2026-07-11 01:35:41,079 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2026-07-11 01:35:41,079 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2026-07-11 01:35:41,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:35:41,261 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c7486c99bcafcc13a371ace8662ade061c1eccf8'
2026-07-11 01:35:41,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:35:41,321 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 532 (Zarr layers) c7486c99bcafcc13a371ace8662ade061c1eccf8'
2026-07-11 01:35:41,968 [ scc.git] DEBUG Auto-merging package-lock.json
2026-07-11 01:35:41,968 [ scc.git] DEBUG Auto-merging package.json
2026-07-11 01:35:41,968 [ scc.git] DEBUG Auto-merging src/app/context.js
2026-07-11 01:35:41,968 [ scc.git] DEBUG Auto-merging src/events/events.js
2026-07-11 01:35:41,968 [ scc.git] DEBUG Auto-merging src/model/image_config.js
2026-07-11 01:35:41,968 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2026-07-11 01:35:41,968 [ scc.git] DEBUG Auto-merging src/viewers/ol3-viewer.js
2026-07-11 01:35:41,968 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2026-07-11 01:35:41,968 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/viewers/viewer/Viewer.js
2026-07-11 01:35:41,968 [ scc.git] DEBUG Auto-merging webpack.dev.config.js
2026-07-11 01:35:41,993 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-07-11 01:35:41,996 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-07-11 01:35:42,085 [ scc.git] DEBUG Calling 'git reset --hard 013cc48f56b76ab5be633e568a034ffca914b0bb'
2026-07-11 01:35:42,503 [ scc.git] DEBUG HEAD is now at 013cc48f merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip)
2026-07-11 01:35:42,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:35:42,687 [ scc.git] DEBUG Calling 'git merge-base cae0b0260125ca856c05b4ac7d723879827a6e76 c7486c99bcafcc13a371ace8662ade061c1eccf8'
2026-07-11 01:35:42,709 [ scc.git] DEBUG Calling 'git diff --name-only 0b7eaf71f7e3f5c7289fab4bf857094bdadce1e4..cae0b0260125ca856c05b4ac7d723879827a6e76'
2026-07-11 01:35:42,731 [ scc.git] INFO - PR 532 will-moore 'Zarr layers'
Conflicting PR. Removed from build [OMERO-plugins-push#5](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/consoleText) for more details.
Possible conflicts:
- PR #227 will-moore 'Vectortile investigation'
- src/viewers/viewer/Viewer.js
--conflicts
2026-07-11 01:35:42,741 [ scc.config] DEBUG Found github.token
2026-07-11 01:35:42,741 [ scc.git] DEBUG Not adding comment to issue #532, already --conflicts.
2026-07-11 01:35:42,741 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...46500d0a497fc9945eeca87fd36672b2bf8d6e79'
2026-07-11 01:35:42,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:35:42,792 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 535 (Bump tmp and eslint) 46500d0a497fc9945eeca87fd36672b2bf8d6e79'
2026-07-11 01:35:43,167 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:35:43,255 [ scc.git] DEBUG package-lock.json | 2238 +++++++++++++++++++++--------------------------------
2026-07-11 01:35:43,256 [ scc.git] DEBUG package.json | 2 +-
2026-07-11 01:35:43,256 [ scc.git] DEBUG 2 files changed, 869 insertions(+), 1371 deletions(-)
2026-07-11 01:35:43,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:35:43,437 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9e3d6f94ebb795775ec87353d3d2bb4d678e6e51'
2026-07-11 01:35:43,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:35:43,503 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 536 (Bump shell-quote from 1.8.3 to 1.8.4) 9e3d6f94ebb795775ec87353d3d2bb4d678e6e51'
2026-07-11 01:35:43,743 [ scc.git] DEBUG Auto-merging package-lock.json
2026-07-11 01:35:43,818 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:35:43,900 [ scc.git] DEBUG package-lock.json | 12 ++++++------
2026-07-11 01:35:43,900 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-)
2026-07-11 01:35:44,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:35:44,235 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16a64815dd14cc424f6ac8b24630b37ccfd0c282'
2026-07-11 01:35:44,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:35:44,298 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 537 (Bump launch-editor from 2.13.2 to 2.14.1) 16a64815dd14cc424f6ac8b24630b37ccfd0c282'
2026-07-11 01:35:44,520 [ scc.git] DEBUG Auto-merging package-lock.json
2026-07-11 01:35:44,602 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:35:44,692 [ scc.git] DEBUG package-lock.json | 16 ++++++++--------
2026-07-11 01:35:44,692 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 8 deletions(-)
2026-07-11 01:35:44,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:35:44,891 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0f0014ac7a6b5a5423c4d298541516407fd6d3cb'
2026-07-11 01:35:44,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:35:44,958 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 539 (Bump ws, engine.io and socket.io-adapter) 0f0014ac7a6b5a5423c4d298541516407fd6d3cb'
2026-07-11 01:35:45,211 [ scc.git] DEBUG Auto-merging package-lock.json
2026-07-11 01:35:45,297 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:35:45,375 [ scc.git] DEBUG package-lock.json | 44 ++++++++++++++++++++++----------------------
2026-07-11 01:35:45,376 [ scc.git] DEBUG 1 file changed, 22 insertions(+), 22 deletions(-)
2026-07-11 01:35:45,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:35:45,555 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c568a324264b0d49ff3d53f75024eca7482de94b'
2026-07-11 01:35:45,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:35:45,618 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 540 (Bump @babel/core from 7.5.4 to 7.29.6) c568a324264b0d49ff3d53f75024eca7482de94b'
2026-07-11 01:35:45,837 [ scc.git] DEBUG Auto-merging package-lock.json
2026-07-11 01:35:45,837 [ scc.git] DEBUG Auto-merging package.json
2026-07-11 01:35:45,910 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:35:45,983 [ scc.git] DEBUG package-lock.json | 667 +++++++++++++++++++++++++++++++-----------------------
2026-07-11 01:35:45,983 [ scc.git] DEBUG package.json | 2 +-
2026-07-11 01:35:45,983 [ scc.git] DEBUG 2 files changed, 389 insertions(+), 280 deletions(-)
2026-07-11 01:35:46,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:35:46,183 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...83cb921ccbf7bc394ef317de7cb767468ae7eaad'
2026-07-11 01:35:46,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:35:46,259 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 541 (Only add channel to tile request string if active) 83cb921ccbf7bc394ef317de7cb767468ae7eaad'
2026-07-11 01:35:46,524 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:35:46,598 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 49 ++++++++++++++++++++------------------
2026-07-11 01:35:46,598 [ scc.git] DEBUG 1 file changed, 26 insertions(+), 23 deletions(-)
2026-07-11 01:35:46,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:35:46,804 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...94c91a556df29d493ef65c47a023f6de724c0004'
2026-07-11 01:35:46,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:35:46,878 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 543 (Bump webpack-dev-server from 5.2.4 to 5.2.5) 94c91a556df29d493ef65c47a023f6de724c0004'
2026-07-11 01:35:47,088 [ scc.git] DEBUG Auto-merging package-lock.json
2026-07-11 01:35:47,088 [ scc.git] DEBUG Auto-merging package.json
2026-07-11 01:35:47,153 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:35:47,227 [ scc.git] DEBUG package-lock.json | 14 +++++++-------
2026-07-11 01:35:47,227 [ scc.git] DEBUG package.json | 2 +-
2026-07-11 01:35:47,227 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 8 deletions(-)
2026-07-11 01:35:47,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:35:47,414 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b9d6befc6684104960c2906702c2eb687dc1e851'
2026-07-11 01:35:47,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:35:47,475 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 544 (Bump js-yaml, mocha and eslint) b9d6befc6684104960c2906702c2eb687dc1e851'
2026-07-11 01:35:47,718 [ scc.git] DEBUG Auto-merging package-lock.json
2026-07-11 01:35:47,719 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2026-07-11 01:35:47,719 [ scc.git] DEBUG Auto-merging package.json
2026-07-11 01:35:47,719 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package.json
2026-07-11 01:35:47,746 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-07-11 01:35:47,748 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-07-11 01:35:47,786 [ scc.git] DEBUG Calling 'git reset --hard eabf93cfbb6510fa4d5de8aa6ea7bdfc8c5906d3'
2026-07-11 01:35:47,955 [ scc.git] DEBUG HEAD is now at eabf93cf merge master -Dorg -Ssuccess-only: PR 543 (Bump webpack-dev-server from 5.2.4 to 5.2.5)
2026-07-11 01:35:48,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:35:48,154 [ scc.git] DEBUG Calling 'git merge-base cae0b0260125ca856c05b4ac7d723879827a6e76 b9d6befc6684104960c2906702c2eb687dc1e851'
2026-07-11 01:35:48,177 [ scc.git] DEBUG Calling 'git diff --name-only cae0b0260125ca856c05b4ac7d723879827a6e76..cae0b0260125ca856c05b4ac7d723879827a6e76'
2026-07-11 01:35:48,194 [ scc.git] INFO - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint'
Conflicting PR. Removed from build [OMERO-plugins-push#5](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/consoleText) for more details.
Possible conflicts:
- PR #532 will-moore 'Zarr layers'
- package-lock.json
- package.json
- PR #535 dependabot[bot] 'Bump tmp and eslint'
- package-lock.json
- package.json
- PR #536 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.8.4'
- package-lock.json
- PR #537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1'
- package-lock.json
- PR #539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter'
- package-lock.json
- PR #540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6'
- package-lock.json
- package.json
- PR #543 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.5'
- package-lock.json
- package.json
--conflicts
2026-07-11 01:35:48,204 [ scc.config] DEBUG Found github.token
2026-07-11 01:35:48,204 [ scc.git] DEBUG Not adding comment to issue #544, already --conflicts.
2026-07-11 01:35:48,204 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf1523e8c6e3d91d8b862eb49a5b679caa796c78'
2026-07-11 01:35:48,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:35:48,263 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 546 (Use POST data for saveImgRdef params) cf1523e8c6e3d91d8b862eb49a5b679caa796c78'
2026-07-11 01:35:48,533 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:35:48,617 [ scc.git] DEBUG src/model/image_config.js | 7 ++++---
2026-07-11 01:35:48,618 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 3 deletions(-)
2026-07-11 01:35:48,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:35:48,800 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:35:48,914 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:35:48,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:35:48,927 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:35:49,037 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:35:49,152 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6c552fd0> has no local changes
2026-07-11 01:35:49,153 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' (status: action_required)
- PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft)
- PR 508 will-moore 'Broadcast channel demo' (stage: draft)
- PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Updating 7a798cee..cae0b026
Previously merged:
- PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings'
- PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter'
- PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4'
- PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2'
- PR 529 will-moore 'Image id and roi id initial params'
- PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan'
- PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10'
- PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1'
- PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0'
- PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1'
- PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13'
- PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0'
- PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2'
- PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0'
- PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from'
- PR 513 jburel 'Bump Python version'
- PR 512 jburel 'Replace manual changelog by automated GH release step'
- PR 465 will-moore 'Save as Figure'
- PR 517 will-moore 'Fix roi link permissions'
- PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6'
- PR 510 joshmoore 'Re-enable omero-test-infra'
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 227 will-moore 'Vectortile investigation'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 535 dependabot[bot] 'Bump tmp and eslint'
- PR 536 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.8.4'
- PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1'
- PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter'
- PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6'
- PR 541 will-moore 'Only add channel to tile request string if active'
- PR 543 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.5'
- PR 546 will-moore 'Use POST data for saveImgRdef params'
Conflicting PRs (not included):
- PR 532 will-moore 'Zarr layers'
- PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:35:49,286 [ scc.git] DEBUG [detached HEAD 65e6c6cf] merge master -Dorg -Ssuccess-only
2026-07-11 01:35:49,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:35:49,288 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:35:49,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2026-07-11 01:35:50,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None
2026-07-11 01:35:50,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None
2026-07-11 01:35:50,642 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:35:51,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None
2026-07-11 01:35:51,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:35:52,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:35:52,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None
2026-07-11 01:35:53,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:35:53,251 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:35:53,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None
2026-07-11 01:35:54,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None
2026-07-11 01:35:54,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:35:55,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None
2026-07-11 01:35:55,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:35:55,745 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2026-07-11 01:35:56,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2026-07-11 01:35:56,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2026-07-11 01:35:57,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None
2026-07-11 01:35:57,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:35:58,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None
2026-07-11 01:35:58,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:35:58,717 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2026-07-11 01:35:58,717 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:35:58,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2026-07-11 01:35:58,718 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:35:58,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:35:58,739 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:35:58,759 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:35:58,759 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:35:58,781 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:35:58,860 [ scc.git] DEBUG Already up to date.
2026-07-11 01:35:58,860 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2026-07-11 01:35:59,273 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2026-07-11 01:35:59,273 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2026-07-11 01:35:59,301 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head'
2026-07-11 01:35:59,732 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2026-07-11 01:35:59,732 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD
2026-07-11 01:35:59,756 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head'
2026-07-11 01:36:00,142 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2026-07-11 01:36:00,142 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD
2026-07-11 01:36:00,164 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:36:00,164 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:00,164 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:00,179 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2026-07-11 01:36:00,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:00,224 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2026-07-11 01:36:00,478 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:36:00,549 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2026-07-11 01:36:00,549 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2026-07-11 01:36:00,549 [ scc.git] DEBUG requirements.txt | 2 +-
2026-07-11 01:36:00,549 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2026-07-11 01:36:00,550 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2026-07-11 01:36:00,550 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2026-07-11 01:36:00,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:36:00,742 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2026-07-11 01:36:00,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:00,798 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2026-07-11 01:36:01,049 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:36:01,124 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-07-11 01:36:01,124 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-07-11 01:36:01,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:36:01,322 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2026-07-11 01:36:01,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:01,375 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2026-07-11 01:36:01,557 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml
2026-07-11 01:36:01,557 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml
2026-07-11 01:36:01,583 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-07-11 01:36:01,585 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-07-11 01:36:01,612 [ scc.git] DEBUG Calling 'git reset --hard a9818e90577d42e88fb00292cf0550e29748dd81'
2026-07-11 01:36:01,768 [ scc.git] DEBUG HEAD is now at a9818e9 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI)
2026-07-11 01:36:01,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:36:01,957 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2026-07-11 01:36:01,978 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a'
2026-07-11 01:36:01,997 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PR. Removed from build [OMERO-plugins-push#5](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/consoleText) for more details.
Possible conflicts:
- PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
- .github/workflows/publish_pypi.yml
--conflicts
2026-07-11 01:36:02,008 [ scc.config] DEBUG Found github.token
2026-07-11 01:36:02,008 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts.
2026-07-11 01:36:02,008 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:36:02,127 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:02,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:02,142 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:36:02,260 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:36:02,338 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6c31d1d0> has no local changes
2026-07-11 01:36:02,338 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:36:02,480 [ scc.git] DEBUG [detached HEAD 19b1844] merge master -Dorg -Ssuccess-only
2026-07-11 01:36:02,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:36:02,482 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:36:02,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2026-07-11 01:36:03,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None
2026-07-11 01:36:03,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None
2026-07-11 01:36:04,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:04,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:36:05,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:05,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:36:05,762 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper'
2026-07-11 01:36:06,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2026-07-11 01:36:06,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2026-07-11 01:36:07,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:07,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:36:08,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:08,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:36:08,750 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2026-07-11 01:36:09,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2026-07-11 01:36:09,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2026-07-11 01:36:10,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:10,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:36:11,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:11,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:36:11,706 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2026-07-11 01:36:11,706 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:36:11,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2026-07-11 01:36:11,707 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:11,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:11,740 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:36:11,764 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:36:11,764 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:36:11,790 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:36:11,966 [ scc.git] DEBUG Updating 3cd120c..55060a2
2026-07-11 01:36:12,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None
2026-07-11 01:36:12,521 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2026-07-11 01:36:13,132 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2026-07-11 01:36:13,132 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2026-07-11 01:36:13,162 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2026-07-11 01:36:13,819 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2026-07-11 01:36:13,819 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2026-07-11 01:36:13,844 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head'
2026-07-11 01:36:14,267 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2026-07-11 01:36:14,267 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD
2026-07-11 01:36:14,294 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:36:14,294 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:14,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:14,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2026-07-11 01:36:14,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:14,366 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2026-07-11 01:36:14,629 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2026-07-11 01:36:14,630 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2026-07-11 01:36:14,630 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2026-07-11 01:36:14,630 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2026-07-11 01:36:14,658 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-07-11 01:36:14,659 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-07-11 01:36:14,682 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2026-07-11 01:36:14,834 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2026-07-11 01:36:15,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:36:15,044 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2026-07-11 01:36:15,079 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501'
2026-07-11 01:36:15,102 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#5](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/populate.py
- src/omero_metadata/cli.py
--conflicts
2026-07-11 01:36:15,115 [ scc.config] DEBUG Found github.token
2026-07-11 01:36:15,115 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2026-07-11 01:36:15,115 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2026-07-11 01:36:15,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:15,175 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2026-07-11 01:36:15,432 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2026-07-11 01:36:15,432 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2026-07-11 01:36:15,432 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2026-07-11 01:36:15,456 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-07-11 01:36:15,457 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-07-11 01:36:15,489 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2026-07-11 01:36:15,630 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2026-07-11 01:36:15,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:36:15,819 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7'
2026-07-11 01:36:15,855 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501'
2026-07-11 01:36:15,876 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#5](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2026-07-11 01:36:15,887 [ scc.config] DEBUG Found github.token
2026-07-11 01:36:15,887 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2026-07-11 01:36:15,887 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f'
2026-07-11 01:36:15,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:15,939 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f'
2026-07-11 01:36:16,149 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:36:16,224 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++-
2026-07-11 01:36:16,224 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-)
2026-07-11 01:36:16,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:36:16,420 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:36:16,563 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:16,563 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:16,582 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:36:16,702 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:36:16,765 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6c553d10> has no local changes
2026-07-11 01:36:16,765 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 92 dominikl 'add resolve_rois to projectwrapper'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:36:16,942 [ scc.git] DEBUG [detached HEAD d236370] merge master -Dorg -Ssuccess-only
2026-07-11 01:36:16,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:36:16,944 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:36:17,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2026-07-11 01:36:17,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None
2026-07-11 01:36:18,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:18,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:36:19,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:19,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:36:19,745 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2026-07-11 01:36:20,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None
2026-07-11 01:36:20,269 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:36:20,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:21,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:36:21,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:22,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:36:22,460 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2026-07-11 01:36:22,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None
2026-07-11 01:36:22,940 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:36:23,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:24,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:36:24,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:25,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:36:25,044 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2026-07-11 01:36:25,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2026-07-11 01:36:25,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2026-07-11 01:36:26,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2026-07-11 01:36:26,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2026-07-11 01:36:27,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2026-07-11 01:36:27,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2026-07-11 01:36:28,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2026-07-11 01:36:28,397 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:36:28,397 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2026-07-11 01:36:28,399 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:28,399 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:28,424 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:36:28,442 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:36:28,442 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:36:28,465 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:36:28,556 [ scc.git] DEBUG Already up to date.
2026-07-11 01:36:28,556 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head'
2026-07-11 01:36:28,963 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2026-07-11 01:36:28,963 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD
2026-07-11 01:36:29,003 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head'
2026-07-11 01:36:29,419 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2026-07-11 01:36:29,419 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD
2026-07-11 01:36:29,447 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head'
2026-07-11 01:36:29,879 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2026-07-11 01:36:29,879 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD
2026-07-11 01:36:29,903 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:36:29,904 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:29,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:29,918 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0'
2026-07-11 01:36:29,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:29,956 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0'
2026-07-11 01:36:30,193 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:36:30,265 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++----------------------------
2026-07-11 01:36:30,265 [ scc.git] DEBUG package.json | 2 +-
2026-07-11 01:36:30,265 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-)
2026-07-11 01:36:30,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:36:30,454 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80'
2026-07-11 01:36:30,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:30,499 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80'
2026-07-11 01:36:30,668 [ scc.git] DEBUG Auto-merging package-lock.json
2026-07-11 01:36:30,668 [ scc.git] DEBUG Auto-merging package.json
2026-07-11 01:36:30,745 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:36:30,817 [ scc.git] DEBUG package-lock.json | 18 ++++++++++--------
2026-07-11 01:36:30,817 [ scc.git] DEBUG package.json | 2 +-
2026-07-11 01:36:30,817 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-)
2026-07-11 01:36:30,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:36:30,997 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2026-07-11 01:36:31,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:31,052 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2026-07-11 01:36:31,262 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:36:31,334 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-07-11 01:36:31,336 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-07-11 01:36:31,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:36:31,514 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:36:31,633 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:31,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:31,648 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:36:31,748 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:36:31,810 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6c36dd50> has no local changes
2026-07-11 01:36:31,810 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:36:31,950 [ scc.git] DEBUG [detached HEAD 1231b91] merge master -Dorg -Ssuccess-only
2026-07-11 01:36:31,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:36:31,951 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:36:32,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2026-07-11 01:36:32,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None
2026-07-11 01:36:32,691 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:36:33,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:33,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:36:34,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:36:34,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:35,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:36:35,313 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:36:35,313 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:36:35,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2026-07-11 01:36:35,314 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:35,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:35,334 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:36:35,352 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:36:35,352 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:36:35,384 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:36:35,455 [ scc.git] DEBUG Already up to date.
2026-07-11 01:36:35,455 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2026-07-11 01:36:35,865 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2026-07-11 01:36:35,865 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2026-07-11 01:36:35,887 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:36:35,887 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:35,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:35,901 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e'
2026-07-11 01:36:35,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:35,938 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e'
2026-07-11 01:36:36,153 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:36:36,225 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-07-11 01:36:36,225 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-07-11 01:36:36,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:36:36,411 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:36:36,530 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:36,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:36,544 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:36:36,662 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:36:36,714 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6c552e10> has no local changes
2026-07-11 01:36:36,714 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:36:36,855 [ scc.git] DEBUG [detached HEAD 4bb3a7a] merge master -Dorg -Ssuccess-only
2026-07-11 01:36:36,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:36:36,857 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:36:37,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2026-07-11 01:36:37,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None
2026-07-11 01:36:37,647 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:36:37,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2026-07-11 01:36:37,648 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:37,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:37,666 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:36:37,684 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:36:37,684 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:36:37,707 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:36:37,902 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96
2026-07-11 01:36:38,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None
2026-07-11 01:36:39,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None
2026-07-11 01:36:39,226 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:36:39,226 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:39,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:39,246 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:36:39,348 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:39,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:39,360 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:36:39,460 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:36:39,524 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6c364410> has no local changes
2026-07-11 01:36:39,524 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Updating bdfeb5e..fc9ff96
Previously merged:
- PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml'
- PR 35 will-moore 'Add roi to array functions'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:36:39,654 [ scc.git] DEBUG [detached HEAD a761147] merge master -Dorg -Ssuccess-only
2026-07-11 01:36:39,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:36:39,656 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:36:39,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2026-07-11 01:36:40,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None
2026-07-11 01:36:40,463 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:36:41,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:41,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:36:42,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:36:42,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:43,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:36:43,039 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:36:43,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2026-07-11 01:36:44,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2026-07-11 01:36:44,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:45,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:36:45,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:45,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:36:45,990 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2026-07-11 01:36:45,990 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:36:45,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2026-07-11 01:36:45,992 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:45,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:46,014 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:36:46,033 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:36:46,033 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:36:46,055 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:36:46,118 [ scc.git] DEBUG Already up to date.
2026-07-11 01:36:46,118 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2026-07-11 01:36:46,689 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2026-07-11 01:36:46,689 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2026-07-11 01:36:46,713 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head'
2026-07-11 01:36:47,092 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2026-07-11 01:36:47,093 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD
2026-07-11 01:36:47,120 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:36:47,120 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:47,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:47,133 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2026-07-11 01:36:47,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:47,176 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2026-07-11 01:36:47,483 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2026-07-11 01:36:47,484 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2026-07-11 01:36:47,484 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2026-07-11 01:36:47,484 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2026-07-11 01:36:47,484 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2026-07-11 01:36:47,484 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2026-07-11 01:36:47,484 [ scc.git] DEBUG Auto-merging setup.py
2026-07-11 01:36:47,484 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2026-07-11 01:36:47,509 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-07-11 01:36:47,510 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-07-11 01:36:47,547 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2026-07-11 01:36:47,735 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2026-07-11 01:36:47,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:36:47,942 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2026-07-11 01:36:47,970 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2026-07-11 01:36:47,994 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#5](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/signup_settings.py
- omero_signup/urls.py
- omero_signup/views.py
- setup.py
--conflicts
2026-07-11 01:36:48,008 [ scc.config] DEBUG Found github.token
2026-07-11 01:36:48,008 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2026-07-11 01:36:48,008 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa'
2026-07-11 01:36:48,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:48,040 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa'
2026-07-11 01:36:48,230 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:36:48,292 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-07-11 01:36:48,292 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-07-11 01:36:48,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:36:48,482 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:36:48,600 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:48,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:48,612 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:36:48,709 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:36:48,785 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6c392390> has no local changes
2026-07-11 01:36:48,785 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:36:48,913 [ scc.git] DEBUG [detached HEAD 903a03e] merge master -Dorg -Ssuccess-only
2026-07-11 01:36:48,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:36:48,915 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:36:49,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2026-07-11 01:36:49,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2026-07-11 01:36:50,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2026-07-11 01:36:50,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None
2026-07-11 01:36:51,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:51,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:36:52,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:52,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:36:52,579 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker'
2026-07-11 01:36:52,579 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:36:52,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2026-07-11 01:36:52,580 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:52,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:52,599 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:36:52,620 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:36:52,620 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:36:52,644 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:36:52,803 [ scc.git] DEBUG Updating cda3ec6..c8a0015
2026-07-11 01:36:53,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None
2026-07-11 01:36:54,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None
2026-07-11 01:36:54,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None
2026-07-11 01:36:54,908 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2026-07-11 01:36:55,351 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2026-07-11 01:36:55,351 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2026-07-11 01:36:55,371 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:36:55,371 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:55,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:55,383 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623'
2026-07-11 01:36:55,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:55,425 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623'
2026-07-11 01:36:55,591 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml
2026-07-11 01:36:55,658 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:36:55,730 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++
2026-07-11 01:36:55,730 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++
2026-07-11 01:36:55,730 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++
2026-07-11 01:36:55,730 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++
2026-07-11 01:36:55,730 [ scc.git] DEBUG ms/test | 2 ++
2026-07-11 01:36:55,730 [ scc.git] DEBUG 5 files changed, 56 insertions(+)
2026-07-11 01:36:55,730 [ scc.git] DEBUG create mode 100644 ms/compose.yml
2026-07-11 01:36:55,730 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile
2026-07-11 01:36:55,730 [ scc.git] DEBUG create mode 100755 ms/test
2026-07-11 01:36:55,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:36:55,924 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:36:56,030 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:56,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:56,044 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:36:56,149 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:36:56,235 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6c304550> has no local changes
2026-07-11 01:36:56,235 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
Updating cda3ec6..c8a0015
Previously merged:
- PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT'
- PR 82 jburel 'Upgrade python'
- PR 81 erickmartins 'add ulimits to omero-server container'
Merged PRs:
- PR 74 joshmoore 'Add 'ms' target for ./docker'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:36:56,421 [ scc.git] DEBUG [detached HEAD 1a52019] merge master -Dorg -Ssuccess-only
2026-07-11 01:36:56,422 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:36:56,422 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:36:56,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None
2026-07-11 01:36:57,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None
2026-07-11 01:36:57,173 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:36:57,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:58,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:36:58,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:36:59,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None
2026-07-11 01:36:59,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:36:59,817 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:36:59,817 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:36:59,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2026-07-11 01:36:59,818 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:36:59,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:36:59,840 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:36:59,861 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:36:59,861 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:36:59,886 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:36:59,948 [ scc.git] DEBUG Already up to date.
2026-07-11 01:36:59,948 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2026-07-11 01:37:00,363 [ scc.git] DEBUG From https://github.com/ome/omero-upload
2026-07-11 01:37:00,363 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2026-07-11 01:37:00,391 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:37:00,391 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:00,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:00,407 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea'
2026-07-11 01:37:00,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:00,446 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea'
2026-07-11 01:37:00,628 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:37:00,692 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-07-11 01:37:00,692 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-07-11 01:37:00,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:00,894 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:37:01,017 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:01,017 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:01,031 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:37:01,144 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:37:01,199 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6c3b7710> has no local changes
2026-07-11 01:37:01,199 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Merged PRs:
- PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:37:01,319 [ scc.git] DEBUG [detached HEAD dd835c7] merge master -Dorg -Ssuccess-only
2026-07-11 01:37:01,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:01,321 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:37:01,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2026-07-11 01:37:02,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None
2026-07-11 01:37:02,073 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:37:02,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None
2026-07-11 01:37:03,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:37:03,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:37:04,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None
2026-07-11 01:37:04,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:37:04,719 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:37:04,719 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:37:04,719 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2026-07-11 01:37:04,720 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:04,720 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:04,741 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:37:04,760 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:37:04,760 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:37:04,783 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:37:04,966 [ scc.git] DEBUG Updating deab817..160d894
2026-07-11 01:37:05,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None
2026-07-11 01:37:05,571 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head'
2026-07-11 01:37:05,986 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2026-07-11 01:37:05,986 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD
2026-07-11 01:37:06,035 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:37:06,035 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:06,035 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:06,048 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902'
2026-07-11 01:37:06,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:06,114 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902'
2026-07-11 01:37:06,338 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:37:06,398 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-07-11 01:37:06,398 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-07-11 01:37:06,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:06,591 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:37:06,704 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:06,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:06,716 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:37:06,821 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:37:06,870 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6817ded0> has no local changes
2026-07-11 01:37:06,870 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:37:07,001 [ scc.git] DEBUG [detached HEAD 06c29e0] merge master -Dorg -Ssuccess-only
2026-07-11 01:37:07,003 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:07,003 [ scc.git] INFO Overriding base-branch from master to main
2026-07-11 01:37:07,003 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:37:07,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2026-07-11 01:37:07,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None
2026-07-11 01:37:08,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None
2026-07-11 01:37:08,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None
2026-07-11 01:37:09,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:37:09,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:37:10,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None
2026-07-11 01:37:10,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:37:10,766 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import'
2026-07-11 01:37:11,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2026-07-11 01:37:11,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2026-07-11 01:37:12,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2026-07-11 01:37:12,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None
2026-07-11 01:37:13,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:37:13,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None
2026-07-11 01:37:14,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:37:14,177 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2026-07-11 01:37:14,178 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:37:14,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2026-07-11 01:37:14,179 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:14,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:14,200 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2026-07-11 01:37:14,219 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:37:14,219 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2026-07-11 01:37:14,242 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2026-07-11 01:37:14,393 [ scc.git] DEBUG Updating 8f3c313..4e1e685
2026-07-11 01:37:14,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None
2026-07-11 01:37:15,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None
2026-07-11 01:37:15,743 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2026-07-11 01:37:16,218 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2026-07-11 01:37:16,218 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2026-07-11 01:37:16,245 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head'
2026-07-11 01:37:16,885 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2026-07-11 01:37:16,885 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD
2026-07-11 01:37:16,909 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:37:16,909 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:16,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:16,925 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2026-07-11 01:37:16,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:16,966 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2026-07-11 01:37:17,199 [ scc.git] DEBUG Auto-merging README.rst
2026-07-11 01:37:17,199 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2026-07-11 01:37:17,199 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2026-07-11 01:37:17,199 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py
2026-07-11 01:37:17,219 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-07-11 01:37:17,220 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-07-11 01:37:17,252 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368'
2026-07-11 01:37:17,375 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1
2026-07-11 01:37:17,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:17,554 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2026-07-11 01:37:17,589 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368'
2026-07-11 01:37:17,609 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#5](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2026-07-11 01:37:17,634 [ scc.config] DEBUG Found github.token
2026-07-11 01:37:17,634 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2026-07-11 01:37:17,634 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc'
2026-07-11 01:37:17,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:17,688 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc'
2026-07-11 01:37:17,879 [ scc.git] DEBUG Auto-merging README.rst
2026-07-11 01:37:17,879 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py
2026-07-11 01:37:17,951 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:37:18,034 [ scc.git] DEBUG README.rst | 3 +
2026-07-11 01:37:18,034 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++
2026-07-11 01:37:18,034 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 +
2026-07-11 01:37:18,034 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++-
2026-07-11 01:37:18,034 [ scc.git] DEBUG setup.py | 5 +-
2026-07-11 01:37:18,034 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-)
2026-07-11 01:37:18,034 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html
2026-07-11 01:37:18,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:18,228 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:37:18,344 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:18,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:18,357 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:37:18,456 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:37:18,535 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6c543590> has no local changes
2026-07-11 01:37:18,536 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Updating 8f3c313..4e1e685
Previously merged:
- PR 23 lubianat 'Fix mix of .rst and .md on README'
- PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
Merged PRs:
- PR 21 will-moore 'Web zarr import'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:37:18,655 [ scc.git] DEBUG [detached HEAD c7520c6] merge master -Dorg -Ssuccess-only
2026-07-11 01:37:18,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:18,656 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:37:18,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None
2026-07-11 01:37:19,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None
2026-07-11 01:37:19,429 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:37:20,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None
2026-07-11 01:37:20,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:37:21,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:37:21,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None
2026-07-11 01:37:21,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:37:21,985 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:37:21,985 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:37:21,985 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2026-07-11 01:37:21,986 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:21,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:22,007 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:37:22,029 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:37:22,029 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:37:22,053 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:37:22,116 [ scc.git] DEBUG Already up to date.
2026-07-11 01:37:22,116 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head'
2026-07-11 01:37:22,540 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror
2026-07-11 01:37:22,540 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD
2026-07-11 01:37:22,605 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:37:22,605 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:22,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:22,622 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9'
2026-07-11 01:37:22,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:22,656 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9'
2026-07-11 01:37:22,810 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:37:22,868 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-07-11 01:37:22,868 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-07-11 01:37:23,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:23,048 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:37:23,150 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:23,150 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:23,161 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:37:23,262 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:37:23,306 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba68174690> has no local changes
2026-07-11 01:37:23,306 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Merged PRs:
- PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:37:23,424 [ scc.git] DEBUG [detached HEAD da31518] merge master -Dorg -Ssuccess-only
2026-07-11 01:37:23,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:23,426 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:37:23,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None
2026-07-11 01:37:24,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None
2026-07-11 01:37:24,201 [ scc.repo] DEBUG # ... Include label: dependencies
2026-07-11 01:37:24,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None
2026-07-11 01:37:25,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-07-11 01:37:25,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-07-11 01:37:26,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None
2026-07-11 01:37:26,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2
2026-07-11 01:37:26,820 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:37:26,820 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:37:26,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2026-07-11 01:37:26,821 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:26,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:26,841 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:37:26,859 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:37:26,859 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:37:26,882 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:37:26,936 [ scc.git] DEBUG Already up to date.
2026-07-11 01:37:26,936 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head'
2026-07-11 01:37:27,344 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest
2026-07-11 01:37:27,344 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD
2026-07-11 01:37:27,365 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:37:27,365 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:27,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:27,379 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478'
2026-07-11 01:37:27,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:27,415 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478'
2026-07-11 01:37:27,635 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-07-11 01:37:27,694 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-07-11 01:37:27,694 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-07-11 01:37:27,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:27,873 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:37:27,974 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:27,974 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:27,986 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:37:28,091 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:37:28,140 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba68183350> has no local changes
2026-07-11 01:37:28,140 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Merged PRs:
- PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:37:28,274 [ scc.git] DEBUG [detached HEAD 20ba221] merge master -Dorg -Ssuccess-only
2026-07-11 01:37:28,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:28,275 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:37:28,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2
2026-07-11 01:37:28,502 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:37:28,502 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2026-07-11 01:37:28,503 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:28,503 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:28,525 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-07-11 01:37:28,545 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:37:28,545 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-07-11 01:37:28,570 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-07-11 01:37:28,629 [ scc.git] DEBUG Already up to date.
2026-07-11 01:37:28,629 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:37:28,629 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:28,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:28,646 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:37:28,758 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:28,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:28,771 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:37:28,876 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:37:28,979 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba681c97d0> has no local changes
2026-07-11 01:37:28,979 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:37:29,116 [ scc.git] DEBUG [detached HEAD e462717] merge master -Dorg -Ssuccess-only
2026-07-11 01:37:29,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:29,118 [ scc.git] INFO Overriding base-branch from master to develop
2026-07-11 01:37:29,118 [ scc.repo] DEBUG ## PRs found:
2026-07-11 01:37:29,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 2
2026-07-11 01:37:29,336 [ scc.repo] DEBUG ## Branches found:
2026-07-11 01:37:29,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2026-07-11 01:37:29,336 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:29,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:29,354 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2026-07-11 01:37:29,373 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-07-11 01:37:29,373 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2026-07-11 01:37:29,402 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2026-07-11 01:37:29,668 [ scc.git] DEBUG Updating 4b4c755..5b4d768
2026-07-11 01:37:30,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None
2026-07-11 01:37:30,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None
2026-07-11 01:37:31,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None
2026-07-11 01:37:32,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None
2026-07-11 01:37:33,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None
2026-07-11 01:37:33,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None
2026-07-11 01:37:34,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2026-07-11 01:37:34,659 [ scc.git] DEBUG ## Unique users: []
2026-07-11 01:37:34,659 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:34,659 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:34,675 [ scc.git] DEBUG Calling 'git submodule update'
2026-07-11 01:37:34,784 [ scc.git] DEBUG Get sha1 of %s
2026-07-11 01:37:34,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-07-11 01:37:34,800 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:37:34,903 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:37:34,990 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba681b78d0> has no local changes
2026-07-11 01:37:34,990 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Updating 4b4c755..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
- PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:37:35,139 [ scc.git] DEBUG [detached HEAD 702154a] merge master -Dorg -Ssuccess-only
2026-07-11 01:37:35,141 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:35,141 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-07-11 01:37:35,350 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2026-07-11 01:37:35,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:35,571 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2026-07-11 01:37:35,580 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2026-07-11 01:37:35,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:35,986 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2026-07-11 01:37:35,993 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2026-07-11 01:37:36,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:36,418 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2026-07-11 01:37:36,427 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2026-07-11 01:37:36,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:36,844 [ scc.config] DEBUG Found submodule.omero-figure.url
2026-07-11 01:37:37,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:37,282 [ scc.config] DEBUG Found submodule.omero-figure.branch
2026-07-11 01:37:37,289 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2026-07-11 01:37:37,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:37,734 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2026-07-11 01:37:37,741 [ scc.config] DEBUG Found submodule.omero-gallery.url
2026-07-11 01:37:38,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:38,166 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2026-07-11 01:37:38,173 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2026-07-11 01:37:38,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:38,771 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2026-07-11 01:37:38,779 [ scc.config] DEBUG Found submodule.omero-mapr.url
2026-07-11 01:37:39,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:39,204 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2026-07-11 01:37:39,212 [ scc.config] DEBUG Found submodule.omero-metadata.url
2026-07-11 01:37:39,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:39,627 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2026-07-11 01:37:39,634 [ scc.config] DEBUG Found submodule.omero-parade.url
2026-07-11 01:37:40,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:40,077 [ scc.config] DEBUG Found submodule.omero-parade.branch
2026-07-11 01:37:40,086 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2026-07-11 01:37:40,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:40,507 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2026-07-11 01:37:40,515 [ scc.config] DEBUG Found submodule.omero-rois.url
2026-07-11 01:37:40,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:40,936 [ scc.config] DEBUG Found submodule.omero-signup.url
2026-07-11 01:37:41,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:41,372 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2026-07-11 01:37:41,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:41,803 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2026-07-11 01:37:41,810 [ scc.config] DEBUG Found submodule.omero-upload.url
2026-07-11 01:37:42,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:42,232 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2026-07-11 01:37:42,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:42,813 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2026-07-11 01:37:43,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:43,262 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2026-07-11 01:37:43,269 [ scc.config] DEBUG Found submodule.omero-weberror.url
2026-07-11 01:37:43,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:43,718 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2026-07-11 01:37:43,726 [ scc.config] DEBUG Found submodule.omero-webtest.url
2026-07-11 01:37:44,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:44,143 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2026-07-11 01:37:44,150 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2026-07-11 01:37:44,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:44,604 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2026-07-11 01:37:44,613 [ scc.config] DEBUG Found submodule.scripts.url
2026-07-11 01:37:45,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-07-11 01:37:45,038 [ scc.config] DEBUG Found submodule.scripts.branch
2026-07-11 01:37:45,038 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-07-11 01:37:46,857 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fba6f20e7d0> has local changes
2026-07-11 01:37:46,857 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Updating ce6e13c..68b7303
Previously merged:
- PR 74 jburel 'Replace manual changelog by automated GH release step'
- PR 75 jburel 'Sort the new channels to ensure settings are set'
- PR 71 dominikl 'Escape slash character in image names'
- PR 69 dominikl 'Fix help text for impo/export commands'
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 196 will-moore 'Storage options only if needed' (status: failure)
- PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure)
- PR 181 will-moore 'Add labels support for import' (exclude comment)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..9f844b8
Previously merged:
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- PR 192 jburel 'Set Omero pixel size'
- PR 186 jburel 'Create release from tag'
- PR 187 dominikl 'Fix target-by-name option'
- PR 180 will-moore 'Import command'
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 193 dominikl 'Only parse import uris if stated'
Conflicting PRs (not included):
- PR 174 will-moore 'Skip wells'
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
- PR 182 will-moore 'Revert "Remove support for Plate import"'
Repository: ome/omero-figure
Updating 9cc36cde..18887279
Previously merged:
- PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9'
- PR 691 dependabot[bot] 'Bump esbuild and vite'
- PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images'
- PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15'
- PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0'
- PR 688 will-moore 'app handles ?image=1 without needing /new?image=1'
- PR 685 will-moore 'Fix static files links for release build'
- PR 683 will-moore 'Add touch support for clicking on single panel'
- PR 680 will-moore 'Use --pre install for export script in README'
- PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml'
- PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi'
- PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs'
- PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2'
- PR 666 will-moore 'Standalone app'
- PR 676 dependabot[bot] 'Bump picomatch'
- PR 669 will-moore 'Standalone python script'
- PR 662 will-moore 'Export script handles OME-zarr images'
- PR 663 will-moore 'Zarr'
- PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8'
- PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2'
- PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8'
- PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues'
- PR 667 Tom-TBT 'Label suggestion interface'
- PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID'
- PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO'
- PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0'
- PR 664 Nirkan 'Handle many channels '
- PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes'
- PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540'
- PR 661 Rdornier 'Align to grid - check if panels are already in the grid'
- PR 649 jburel 'Replace manual changelog by automated GH release step'
- PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout'
- PR 637 Rdornier 'Fix scalebar position'
- PR 600 Rdornier 'Label on rois'
- PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles'
- PR 651 Rdornier 'More compliant align to grid'
- PR 650 jburel 'Bump Python version'
- PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
- PR 646 JensWendt 'fix word wrap of image names'
- PR 612 will-moore 'Script version'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 616 Rdornier 'Fix labels around border'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 '
- PR 692 will-moore 'colorbar lut background fix'
- PR 694 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.11'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
- PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' (status: action_required)
- PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft)
- PR 508 will-moore 'Broadcast channel demo' (stage: draft)
- PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Updating 7a798cee..cae0b026
Previously merged:
- PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings'
- PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter'
- PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4'
- PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2'
- PR 529 will-moore 'Image id and roi id initial params'
- PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan'
- PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10'
- PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1'
- PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0'
- PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1'
- PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13'
- PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0'
- PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2'
- PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0'
- PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from'
- PR 513 jburel 'Bump Python version'
- PR 512 jburel 'Replace manual changelog by automated GH release step'
- PR 465 will-moore 'Save as Figure'
- PR 517 will-moore 'Fix roi link permissions'
- PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6'
- PR 510 joshmoore 'Re-enable omero-test-infra'
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 227 will-moore 'Vectortile investigation'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 535 dependabot[bot] 'Bump tmp and eslint'
- PR 536 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.8.4'
- PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1'
- PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter'
- PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6'
- PR 541 will-moore 'Only add channel to tile request string if active'
- PR 543 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.5'
- PR 546 will-moore 'Use POST data for saveImgRdef params'
Conflicting PRs (not included):
- PR 532 will-moore 'Zarr layers'
- PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 92 dominikl 'add resolve_rois to projectwrapper'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Updating bdfeb5e..fc9ff96
Previously merged:
- PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml'
- PR 35 will-moore 'Add roi to array functions'
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
Updating cda3ec6..c8a0015
Previously merged:
- PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT'
- PR 82 jburel 'Upgrade python'
- PR 81 erickmartins 'add ulimits to omero-server container'
Merged PRs:
- PR 74 joshmoore 'Add 'ms' target for ./docker'
Repository: ome/omero-upload
Already up to date.
Merged PRs:
- PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Updating 8f3c313..4e1e685
Previously merged:
- PR 23 lubianat 'Fix mix of .rst and .md on README'
- PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
Merged PRs:
- PR 21 will-moore 'Web zarr import'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Merged PRs:
- PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: openmicroscopy/omero-webtest
Already up to date.
Merged PRs:
- PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/rOMERO-gateway
Already up to date.
Repository: ome/scripts
Updating 4b4c755..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
- PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Generated by OMERO-plugins-push#5 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/5/)'
2026-07-11 01:37:47,349 [ scc.git] DEBUG [detached HEAD b8718c4] merge master -Dorg -Ssuccess-only
2026-07-11 01:37:47,349 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2026-07-11 01:37:47,351 [ scc.merge] INFO Repository: ome/omero-plugins
2026-07-11 01:37:47,351 [ scc.merge] INFO Already up to date.
2026-07-11 01:37:47,351 [ scc.merge] INFO
2026-07-11 01:37:47,351 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,351 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2026-07-11 01:37:47,351 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2026-07-11 01:37:47,351 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2026-07-11 01:37:47,351 [ scc.merge] INFO
2026-07-11 01:37:47,351 [ scc.merge] INFO Repository: ome/minimal-omero-client
2026-07-11 01:37:47,351 [ scc.merge] INFO Already up to date.
2026-07-11 01:37:47,351 [ scc.merge] INFO
2026-07-11 01:37:47,351 [ scc.merge] INFO
2026-07-11 01:37:47,351 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2026-07-11 01:37:47,351 [ scc.merge] INFO Excluded PRs:
2026-07-11 01:37:47,351 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2026-07-11 01:37:47,351 [ scc.merge] INFO Already up to date.
2026-07-11 01:37:47,351 [ scc.merge] INFO
2026-07-11 01:37:47,351 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,351 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:37:47,351 [ scc.merge] INFO
2026-07-11 01:37:47,351 [ scc.merge] INFO Repository: ome/omero-cli-render
2026-07-11 01:37:47,351 [ scc.merge] INFO Excluded PRs:
2026-07-11 01:37:47,351 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2026-07-11 01:37:47,351 [ scc.merge] INFO Updating ce6e13c..68b7303
2026-07-11 01:37:47,351 [ scc.merge] INFO Previously merged:
2026-07-11 01:37:47,351 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step'
2026-07-11 01:37:47,351 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set'
2026-07-11 01:37:47,351 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names'
2026-07-11 01:37:47,351 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands'
2026-07-11 01:37:47,351 [ scc.merge] INFO
2026-07-11 01:37:47,351 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,351 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2026-07-11 01:37:47,351 [ scc.merge] INFO
2026-07-11 01:37:47,351 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2026-07-11 01:37:47,351 [ scc.merge] INFO Excluded PRs:
2026-07-11 01:37:47,351 [ scc.merge] INFO - PR 196 will-moore 'Storage options only if needed' (status: failure)
2026-07-11 01:37:47,351 [ scc.merge] INFO - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure)
2026-07-11 01:37:47,351 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment)
2026-07-11 01:37:47,351 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft)
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft)
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
2026-07-11 01:37:47,352 [ scc.merge] INFO Updating 11d3587..9f844b8
2026-07-11 01:37:47,352 [ scc.merge] INFO Previously merged:
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 186 jburel 'Create release from tag'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 180 will-moore 'Import command'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2026-07-11 01:37:47,352 [ scc.merge] INFO
2026-07-11 01:37:47,352 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated'
2026-07-11 01:37:47,352 [ scc.merge] INFO
2026-07-11 01:37:47,352 [ scc.merge] INFO Conflicting PRs (not included):
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 174 will-moore 'Skip wells'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"'
2026-07-11 01:37:47,352 [ scc.merge] INFO
2026-07-11 01:37:47,352 [ scc.merge] INFO Repository: ome/omero-figure
2026-07-11 01:37:47,352 [ scc.merge] INFO Updating 9cc36cde..18887279
2026-07-11 01:37:47,352 [ scc.merge] INFO Previously merged:
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 691 dependabot[bot] 'Bump esbuild and vite'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 685 will-moore 'Fix static files links for release build'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 683 will-moore 'Add touch support for clicking on single panel'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 680 will-moore 'Use --pre install for export script in README'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 666 will-moore 'Standalone app'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 676 dependabot[bot] 'Bump picomatch'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 663 will-moore 'Zarr'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2'
2026-07-11 01:37:47,352 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels '
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 650 jburel 'Bump Python version'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 612 will-moore 'Script version'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2026-07-11 01:37:47,353 [ scc.merge] INFO
2026-07-11 01:37:47,353 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 '
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 692 will-moore 'colorbar lut background fix'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 694 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.11'
2026-07-11 01:37:47,353 [ scc.merge] INFO
2026-07-11 01:37:47,353 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2026-07-11 01:37:47,353 [ scc.merge] INFO Already up to date.
2026-07-11 01:37:47,353 [ scc.merge] INFO
2026-07-11 01:37:47,353 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:37:47,353 [ scc.merge] INFO
2026-07-11 01:37:47,353 [ scc.merge] INFO Repository: ome/omero-gallery
2026-07-11 01:37:47,353 [ scc.merge] INFO Already up to date.
2026-07-11 01:37:47,353 [ scc.merge] INFO
2026-07-11 01:37:47,353 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2026-07-11 01:37:47,353 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2026-07-11 01:37:47,354 [ scc.merge] INFO
2026-07-11 01:37:47,354 [ scc.merge] INFO Conflicting PRs (not included):
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2026-07-11 01:37:47,354 [ scc.merge] INFO
2026-07-11 01:37:47,354 [ scc.merge] INFO Repository: ome/omero-iviewer
2026-07-11 01:37:47,354 [ scc.merge] INFO Excluded PRs:
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' (status: action_required)
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft)
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft)
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2026-07-11 01:37:47,354 [ scc.merge] INFO Updating 7a798cee..cae0b026
2026-07-11 01:37:47,354 [ scc.merge] INFO Previously merged:
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 529 will-moore 'Image id and roi id initial params'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 513 jburel 'Bump Python version'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 517 will-moore 'Fix roi link permissions'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2026-07-11 01:37:47,354 [ scc.merge] INFO
2026-07-11 01:37:47,354 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 535 dependabot[bot] 'Bump tmp and eslint'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 536 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.8.4'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 541 will-moore 'Only add channel to tile request string if active'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 543 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.5'
2026-07-11 01:37:47,354 [ scc.merge] INFO - PR 546 will-moore 'Use POST data for saveImgRdef params'
2026-07-11 01:37:47,355 [ scc.merge] INFO
2026-07-11 01:37:47,355 [ scc.merge] INFO Conflicting PRs (not included):
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 532 will-moore 'Zarr layers'
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint'
2026-07-11 01:37:47,355 [ scc.merge] INFO
2026-07-11 01:37:47,355 [ scc.merge] INFO Repository: ome/omero-mapr
2026-07-11 01:37:47,355 [ scc.merge] INFO Excluded PRs:
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2026-07-11 01:37:47,355 [ scc.merge] INFO Already up to date.
2026-07-11 01:37:47,355 [ scc.merge] INFO
2026-07-11 01:37:47,355 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2026-07-11 01:37:47,355 [ scc.merge] INFO
2026-07-11 01:37:47,355 [ scc.merge] INFO Conflicting PRs (not included):
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:37:47,355 [ scc.merge] INFO
2026-07-11 01:37:47,355 [ scc.merge] INFO Repository: ome/omero-metadata
2026-07-11 01:37:47,355 [ scc.merge] INFO Updating 3cd120c..55060a2
2026-07-11 01:37:47,355 [ scc.merge] INFO Previously merged:
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2026-07-11 01:37:47,355 [ scc.merge] INFO
2026-07-11 01:37:47,355 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper'
2026-07-11 01:37:47,355 [ scc.merge] INFO
2026-07-11 01:37:47,355 [ scc.merge] INFO Conflicting PRs (not included):
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2026-07-11 01:37:47,355 [ scc.merge] INFO
2026-07-11 01:37:47,355 [ scc.merge] INFO Repository: ome/omero-parade
2026-07-11 01:37:47,355 [ scc.merge] INFO Excluded PRs:
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2026-07-11 01:37:47,355 [ scc.merge] INFO Already up to date.
2026-07-11 01:37:47,355 [ scc.merge] INFO
2026-07-11 01:37:47,355 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2026-07-11 01:37:47,355 [ scc.merge] INFO
2026-07-11 01:37:47,355 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2026-07-11 01:37:47,355 [ scc.merge] INFO Already up to date.
2026-07-11 01:37:47,355 [ scc.merge] INFO
2026-07-11 01:37:47,355 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:37:47,355 [ scc.merge] INFO
2026-07-11 01:37:47,355 [ scc.merge] INFO Repository: ome/omero-rois
2026-07-11 01:37:47,355 [ scc.merge] INFO Excluded PRs:
2026-07-11 01:37:47,355 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2026-07-11 01:37:47,356 [ scc.merge] INFO Updating bdfeb5e..fc9ff96
2026-07-11 01:37:47,356 [ scc.merge] INFO Previously merged:
2026-07-11 01:37:47,356 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml'
2026-07-11 01:37:47,356 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions'
2026-07-11 01:37:47,356 [ scc.merge] INFO
2026-07-11 01:37:47,356 [ scc.merge] INFO
2026-07-11 01:37:47,356 [ scc.merge] INFO Repository: ome/omero-signup
2026-07-11 01:37:47,356 [ scc.merge] INFO Already up to date.
2026-07-11 01:37:47,356 [ scc.merge] INFO
2026-07-11 01:37:47,356 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,356 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:37:47,356 [ scc.merge] INFO
2026-07-11 01:37:47,356 [ scc.merge] INFO Conflicting PRs (not included):
2026-07-11 01:37:47,356 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2026-07-11 01:37:47,356 [ scc.merge] INFO
2026-07-11 01:37:47,356 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2026-07-11 01:37:47,356 [ scc.merge] INFO Excluded PRs:
2026-07-11 01:37:47,356 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2026-07-11 01:37:47,356 [ scc.merge] INFO Updating cda3ec6..c8a0015
2026-07-11 01:37:47,356 [ scc.merge] INFO Previously merged:
2026-07-11 01:37:47,356 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT'
2026-07-11 01:37:47,356 [ scc.merge] INFO - PR 82 jburel 'Upgrade python'
2026-07-11 01:37:47,356 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container'
2026-07-11 01:37:47,356 [ scc.merge] INFO
2026-07-11 01:37:47,356 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,356 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker'
2026-07-11 01:37:47,356 [ scc.merge] INFO
2026-07-11 01:37:47,356 [ scc.merge] INFO Repository: ome/omero-upload
2026-07-11 01:37:47,356 [ scc.merge] INFO Already up to date.
2026-07-11 01:37:47,356 [ scc.merge] INFO
2026-07-11 01:37:47,356 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,356 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:37:47,356 [ scc.merge] INFO
2026-07-11 01:37:47,356 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2026-07-11 01:37:47,356 [ scc.merge] INFO Updating deab817..160d894
2026-07-11 01:37:47,356 [ scc.merge] INFO Previously merged:
2026-07-11 01:37:47,356 [ scc.merge] INFO - PR 20 jburel 'Build'
2026-07-11 01:37:47,356 [ scc.merge] INFO
2026-07-11 01:37:47,356 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,356 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:37:47,356 [ scc.merge] INFO
2026-07-11 01:37:47,356 [ scc.merge] INFO Repository: ome/omero-web-zarr
2026-07-11 01:37:47,356 [ scc.merge] INFO Excluded PRs:
2026-07-11 01:37:47,356 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2026-07-11 01:37:47,356 [ scc.merge] INFO Updating 8f3c313..4e1e685
2026-07-11 01:37:47,356 [ scc.merge] INFO Previously merged:
2026-07-11 01:37:47,356 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README'
2026-07-11 01:37:47,356 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
2026-07-11 01:37:47,356 [ scc.merge] INFO
2026-07-11 01:37:47,356 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,356 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import'
2026-07-11 01:37:47,357 [ scc.merge] INFO
2026-07-11 01:37:47,357 [ scc.merge] INFO Conflicting PRs (not included):
2026-07-11 01:37:47,357 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2026-07-11 01:37:47,357 [ scc.merge] INFO
2026-07-11 01:37:47,357 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2026-07-11 01:37:47,357 [ scc.merge] INFO Already up to date.
2026-07-11 01:37:47,357 [ scc.merge] INFO
2026-07-11 01:37:47,357 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,357 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:37:47,357 [ scc.merge] INFO
2026-07-11 01:37:47,357 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2026-07-11 01:37:47,357 [ scc.merge] INFO Already up to date.
2026-07-11 01:37:47,357 [ scc.merge] INFO
2026-07-11 01:37:47,357 [ scc.merge] INFO Merged PRs:
2026-07-11 01:37:47,357 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-07-11 01:37:47,357 [ scc.merge] INFO
2026-07-11 01:37:47,357 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2026-07-11 01:37:47,357 [ scc.merge] INFO Already up to date.
2026-07-11 01:37:47,357 [ scc.merge] INFO
2026-07-11 01:37:47,357 [ scc.merge] INFO
2026-07-11 01:37:47,357 [ scc.merge] INFO Repository: ome/scripts
2026-07-11 01:37:47,357 [ scc.merge] INFO Updating 4b4c755..5b4d768
2026-07-11 01:37:47,357 [ scc.merge] INFO Previously merged:
2026-07-11 01:37:47,357 [ scc.merge] INFO - PR 231 jburel 'Create Release '
2026-07-11 01:37:47,357 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label'
2026-07-11 01:37:47,357 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2026-07-11 01:37:47,357 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix'
2026-07-11 01:37:47,357 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
2026-07-11 01:37:47,357 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes'
2026-07-11 01:37:47,357 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests'
2026-07-11 01:37:47,357 [ scc.merge] INFO
2026-07-11 01:37:47,357 [ scc.merge] INFO
2026-07-11 01:37:47,357 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-07-11 01:37:47,357 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,387 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2026-07-11 01:37:47,387 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2026-07-11 01:37:47,402 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2026-07-11 01:37:47,416 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,431 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2026-07-11 01:37:47,431 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2026-07-11 01:37:47,444 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2026-07-11 01:37:47,459 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2026-07-11 01:37:47,474 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2026-07-11 01:37:47,488 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2026-07-11 01:37:47,501 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2026-07-11 01:37:47,514 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2026-07-11 01:37:47,528 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2026-07-11 01:37:47,540 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2026-07-11 01:37:47,553 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2026-07-11 01:37:47,566 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2026-07-11 01:37:47,582 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,596 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,596 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2026-07-11 01:37:47,596 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2026-07-11 01:37:47,607 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2026-07-11 01:37:47,618 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2026-07-11 01:37:47,629 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2026-07-11 01:37:47,641 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2026-07-11 01:37:47,653 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-07-11 01:37:47,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2026-07-11 01:37:47,665 [ scc.git] DEBUG Calling 'git remote'
2026-07-11 01:37:47,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.11.1-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD c3015fd] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
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Entering 'omero-cli-render'
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(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
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Entering 'omero-metadata'
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Entering 'omero-prometheus-tools'
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[detached HEAD 3e918a4] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2026-07-11 01:38:55,467 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2026-07-11 01:39:05,228 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2026-07-11 01:39:07,824 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2026-07-11 01:39:12,870 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2026-07-11 01:40:03,283 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS