Started by upstream project "Trigger" build number 595 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 527 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.7.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.14.1-py3-none-any.whl.metadata (3.0 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.7.0-py3-none-any.whl (416 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.14.1-py3-none-any.whl (43 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.7.0 PyYAML-6.0.2 certifi-2025.8.3 cffi-1.17.1 charset_normalizer-3.4.3 cryptography-45.0.6 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.14.1 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-08-23 00:37:19,794 [ scc.config] DEBUG Found github.token 2025-08-23 00:37:19,796 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:19,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:37:20,243 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:20,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:37:20,687 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:20,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-23 00:37:20,878 [ scc.gh] DEBUG 4040 remaining from 5000 (Reset at 00:08 2025-08-23 00:37:20,879 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:37:20,881 [ scc.git] DEBUG Check current status 2025-08-23 00:37:20,881 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:37:20,884 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-08-23 00:37:20,884 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:37:20,935 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-08-23 00:37:20,939 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-08-23 00:37:20,943 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-08-23 00:37:20,947 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-08-23 00:37:20,951 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-08-23 00:37:20,954 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-08-23 00:37:20,958 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-08-23 00:37:20,962 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-08-23 00:37:20,965 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-08-23 00:37:20,969 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-08-23 00:37:20,973 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-08-23 00:37:20,976 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-08-23 00:37:20,981 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-08-23 00:37:20,984 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-08-23 00:37:20,988 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-08-23 00:37:20,991 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-08-23 00:37:20,994 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-08-23 00:37:20,997 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-08-23 00:37:21,001 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-08-23 00:37:21,004 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-08-23 00:37:21,007 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-08-23 00:37:21,011 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-08-23 00:37:21,015 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:37:21,130 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:21,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-08-23 00:37:21,705 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:21,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:37:22,248 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:22,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:37:22,697 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:22,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:37:23,161 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:23,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:37:23,417 [ scc.git] DEBUG Resetting... 2025-08-23 00:37:23,417 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-23 00:37:23,426 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-08-23 00:37:23,426 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-23 00:37:23,540 [ scc.git] DEBUG Check current status 2025-08-23 00:37:23,541 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:37:23,543 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-08-23 00:37:23,543 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:37:23,594 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-08-23 00:37:23,598 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-08-23 00:37:23,602 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-08-23 00:37:23,605 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-08-23 00:37:23,610 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-08-23 00:37:23,613 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-08-23 00:37:23,617 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-08-23 00:37:23,620 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-08-23 00:37:23,624 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-08-23 00:37:23,627 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-08-23 00:37:23,631 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-08-23 00:37:23,634 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-08-23 00:37:23,638 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-08-23 00:37:23,641 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-08-23 00:37:23,645 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-08-23 00:37:23,648 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-08-23 00:37:23,651 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-08-23 00:37:23,654 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-08-23 00:37:23,657 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-08-23 00:37:23,660 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-08-23 00:37:23,663 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-08-23 00:37:23,667 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-08-23 00:37:23,668 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-23 00:37:23,668 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-23 00:37:23,669 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-23 00:37:23,669 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-23 00:37:23,669 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-23 00:37:23,669 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:37:23,671 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:23,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-08-23 00:37:24,231 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:24,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-08-23 00:37:24,538 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:37:24,538 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-08-23 00:37:24,789 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:25,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-08-23 00:37:25,056 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:37:25,056 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-08-23 00:37:25,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:25,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-08-23 00:37:25,607 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:37:25,607 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-08-23 00:37:25,607 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:37:25,607 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:37:25,607 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:37:25,610 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:37:25,613 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:37:25,613 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:37:25,616 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:37:25,619 [ scc.git] DEBUG Already up to date. 2025-08-23 00:37:25,619 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-08-23 00:37:25,911 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-23 00:37:25,911 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-08-23 00:37:25,919 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-08-23 00:37:26,200 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-23 00:37:26,200 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-08-23 00:37:26,208 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-08-23 00:37:26,496 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-23 00:37:26,496 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-08-23 00:37:26,503 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:37:26,503 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:37:26,503 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:37:26,506 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-08-23 00:37:26,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:37:26,511 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-08-23 00:37:26,529 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:37:26,532 [ scc.git] DEBUG scripts | 2 +- 2025-08-23 00:37:26,532 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-23 00:37:26,534 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:26,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:37:26,736 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-08-23 00:37:26,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:37:26,741 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-08-23 00:37:26,760 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:37:26,763 [ scc.git] DEBUG omero-figure | 2 +- 2025-08-23 00:37:26,763 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-23 00:37:26,988 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:27,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:37:27,185 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-08-23 00:37:27,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:37:27,191 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-08-23 00:37:27,209 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:37:27,212 [ scc.git] DEBUG omero-iviewer | 2 +- 2025-08-23 00:37:27,212 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-23 00:37:27,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:27,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:37:27,637 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:37:27,707 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-08-23 00:37:27,741 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-08-23 00:37:27,759 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-08-23 00:37:27,760 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:37:27,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:37:27,762 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:37:27,854 [ scc.git] DEBUG has no local changes 2025-08-23 00:37:27,854 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:37:27,936 [ scc.git] DEBUG [detached HEAD 1c1631e] merge master -Dorg -Snone 2025-08-23 00:37:27,936 [ scc.merge] INFO Repository: ome/omero-plugins 2025-08-23 00:37:27,936 [ scc.merge] INFO Already up to date. 2025-08-23 00:37:27,936 [ scc.merge] INFO 2025-08-23 00:37:27,936 [ scc.merge] INFO Merged PRs: 2025-08-23 00:37:27,936 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-08-23 00:37:27,936 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-08-23 00:37:27,936 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-08-23 00:37:27,936 [ scc.merge] INFO 2025-08-23 00:37:27,937 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-23 00:37:27,937 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-zarr': checked out 'f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb' Submodule path 'omero-figure': checked out 'd2c6f5bc061df1e02422728732b07ae7a929ccb2' Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'scripts': checked out '573db340d5d1429fa17c7e486206948412a7c150' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2025-08-23 00:37:35,053 [ scc.config] DEBUG Found github.token 2025-08-23 00:37:35,054 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:35,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:37:35,506 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:35,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:37:35,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:36,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-23 00:37:36,163 [ scc.gh] DEBUG 4026 remaining from 5000 (Reset at 00:08 2025-08-23 00:37:36,164 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:37:36,166 [ scc.git] DEBUG Check current status 2025-08-23 00:37:36,166 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:37:36,169 [ scc.git] DEBUG 1c1631e merge master -Dorg -Snone 2025-08-23 00:37:36,169 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:37:36,222 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-08-23 00:37:36,225 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-08-23 00:37:36,229 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-08-23 00:37:36,233 [ scc.git] DEBUG +f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb omero-cli-zarr (v0.6.1-1-gf7eea7c) 2025-08-23 00:37:36,239 [ scc.git] DEBUG +d2c6f5bc061df1e02422728732b07ae7a929ccb2 omero-figure (v7.2.1-14-gd2c6f5bc) 2025-08-23 00:37:36,242 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-08-23 00:37:36,246 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-08-23 00:37:36,250 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8) 2025-08-23 00:37:36,254 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-08-23 00:37:36,258 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2025-08-23 00:37:36,261 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-08-23 00:37:36,265 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-08-23 00:37:36,269 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-08-23 00:37:36,272 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-08-23 00:37:36,276 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-08-23 00:37:36,279 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-08-23 00:37:36,282 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2025-08-23 00:37:36,285 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-08-23 00:37:36,288 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-08-23 00:37:36,292 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-08-23 00:37:36,295 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-08-23 00:37:36,299 [ scc.git] DEBUG +573db340d5d1429fa17c7e486206948412a7c150 scripts (v5.9.1-1-g573db34) 2025-08-23 00:37:36,302 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:37:36,302 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-08-23 00:37:36,303 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2025-08-23 00:37:36,415 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:36,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-08-23 00:37:36,996 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:37,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:37:37,507 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:37,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:37:37,968 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:38,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:37:38,442 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:38,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:37:38,648 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:37:38,730 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-08-23 00:37:38,730 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:37:38,732 [ scc.git] DEBUG Check current status 2025-08-23 00:37:38,732 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:37:38,735 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2025-08-23 00:37:38,735 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:37:38,776 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:37:38,899 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:39,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2025-08-23 00:37:39,457 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:39,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:37:39,988 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:40,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:37:40,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:40,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:37:40,913 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:41,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:37:41,137 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:37:41,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:37:41,180 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-08-23 00:37:41,180 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:37:41,182 [ scc.git] DEBUG Check current status 2025-08-23 00:37:41,182 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:37:41,185 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2025-08-23 00:37:41,185 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:37:41,228 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:37:41,388 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:41,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2025-08-23 00:37:41,943 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:42,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:37:42,435 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:42,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:37:42,898 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:43,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:37:43,374 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:43,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:37:43,606 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:37:43,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:37:43,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-08-23 00:37:43,648 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:37:43,650 [ scc.git] DEBUG Check current status 2025-08-23 00:37:43,650 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:37:43,652 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2025-08-23 00:37:43,653 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:37:43,695 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:37:43,858 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:44,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2025-08-23 00:37:44,441 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:44,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:37:44,986 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:45,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:37:45,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:45,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:37:45,907 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:46,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:37:46,134 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:37:46,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:37:46,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-08-23 00:37:46,178 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:37:46,180 [ scc.git] DEBUG Check current status 2025-08-23 00:37:46,180 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:37:46,183 [ scc.git] DEBUG f7eea7c Bump version: 0.6.1 → 0.6.2.dev0 2025-08-23 00:37:46,183 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:37:46,225 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:37:46,386 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:46,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2025-08-23 00:37:46,912 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:47,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:37:47,433 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:47,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:37:47,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:48,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:37:48,364 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:48,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:37:48,566 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:37:48,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:37:48,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-08-23 00:37:48,608 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:37:48,610 [ scc.git] DEBUG Check current status 2025-08-23 00:37:48,611 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:37:48,614 [ scc.git] DEBUG d2c6f5bc Merge pull request #638 from Rdornier/fix-arrow-opacity 2025-08-23 00:37:48,614 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:37:48,655 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:37:48,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:49,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2025-08-23 00:37:49,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:49,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:37:49,854 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:50,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:37:50,322 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:50,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:37:50,795 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:50,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:37:50,991 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:37:51,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:37:51,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-08-23 00:37:51,034 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:37:51,036 [ scc.git] DEBUG Check current status 2025-08-23 00:37:51,036 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:37:51,038 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2025-08-23 00:37:51,039 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:37:51,081 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:37:51,242 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:51,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2025-08-23 00:37:51,756 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:52,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:37:52,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:52,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:37:52,766 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:52,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:37:53,221 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:53,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:37:53,463 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:37:53,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:37:53,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-08-23 00:37:53,505 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:37:53,507 [ scc.git] DEBUG Check current status 2025-08-23 00:37:53,507 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:37:53,510 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2025-08-23 00:37:53,510 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:37:53,554 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:37:53,715 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:53,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2025-08-23 00:37:54,241 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:54,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:37:54,780 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:54,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:37:55,234 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:55,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:37:55,683 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:55,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:37:55,907 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:37:55,948 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:37:55,948 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-08-23 00:37:55,948 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:37:55,951 [ scc.git] DEBUG Check current status 2025-08-23 00:37:55,951 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:37:55,953 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action 2025-08-23 00:37:55,954 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:37:55,995 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:37:56,159 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:56,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2025-08-23 00:37:56,717 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:57,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:37:57,277 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:57,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:37:57,734 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:57,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:37:58,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:58,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:37:58,405 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:37:58,447 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:37:58,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-08-23 00:37:58,448 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:37:58,450 [ scc.git] DEBUG Check current status 2025-08-23 00:37:58,450 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:37:58,453 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2025-08-23 00:37:58,453 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:37:58,494 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:37:58,656 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:58,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2025-08-23 00:37:59,209 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:37:59,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:37:59,790 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:00,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:38:00,264 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:00,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:38:00,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:00,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:38:00,937 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:38:00,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:38:00,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-08-23 00:38:00,978 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:38:00,980 [ scc.git] DEBUG Check current status 2025-08-23 00:38:00,980 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:38:00,983 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-08-23 00:38:00,983 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:38:01,026 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:38:01,189 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:01,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2025-08-23 00:38:01,734 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:01,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:38:02,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:02,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:38:02,681 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:02,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:38:03,222 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:03,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:38:03,443 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:38:03,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:38:03,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-08-23 00:38:03,486 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:38:03,488 [ scc.git] DEBUG Check current status 2025-08-23 00:38:03,488 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:38:03,491 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2025-08-23 00:38:03,491 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:38:03,533 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:38:03,695 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:03,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2025-08-23 00:38:04,248 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:04,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:38:04,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:04,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:38:05,215 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:05,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:38:05,665 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:05,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:38:05,863 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:38:05,903 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:38:05,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-08-23 00:38:05,904 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:38:05,906 [ scc.git] DEBUG Check current status 2025-08-23 00:38:05,906 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:38:05,909 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2025-08-23 00:38:05,909 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:38:05,952 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:38:06,114 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:06,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2025-08-23 00:38:06,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:06,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:38:07,153 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:07,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:38:07,617 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:07,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:38:08,069 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:08,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:38:08,280 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:38:08,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:38:08,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-08-23 00:38:08,323 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:38:08,325 [ scc.git] DEBUG Check current status 2025-08-23 00:38:08,325 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:38:08,328 [ scc.git] DEBUG bdfeb5e bump sphinx version 2025-08-23 00:38:08,328 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:38:08,369 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:38:08,532 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:08,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2025-08-23 00:38:09,098 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:09,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:38:09,617 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:09,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:38:10,095 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:10,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:38:10,565 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:10,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:38:10,764 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:38:10,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:38:10,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-08-23 00:38:10,806 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:38:10,808 [ scc.git] DEBUG Check current status 2025-08-23 00:38:10,808 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:38:10,811 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2025-08-23 00:38:10,811 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:38:10,852 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:38:11,015 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:11,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2025-08-23 00:38:11,582 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:11,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:38:12,121 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:12,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:38:12,588 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:12,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:38:13,077 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:13,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:38:13,314 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:38:13,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:38:13,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-08-23 00:38:13,356 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:38:13,358 [ scc.git] DEBUG Check current status 2025-08-23 00:38:13,358 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:38:13,361 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2025-08-23 00:38:13,361 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:38:13,402 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:38:13,566 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:13,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-08-23 00:38:13,801 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-08-23 00:38:13,802 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:14,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2025-08-23 00:38:14,332 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:14,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:38:14,820 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:15,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:38:15,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:15,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:38:15,755 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:15,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:38:15,945 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:38:15,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:38:15,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-08-23 00:38:15,988 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:38:15,990 [ scc.git] DEBUG Check current status 2025-08-23 00:38:15,990 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:38:15,992 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2025-08-23 00:38:15,993 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:38:16,035 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:38:16,197 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:16,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2025-08-23 00:38:16,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:16,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:38:17,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:17,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:38:17,705 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:17,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:38:18,169 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:18,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:38:18,430 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:38:18,470 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:38:18,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-08-23 00:38:18,471 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:38:18,473 [ scc.git] DEBUG Check current status 2025-08-23 00:38:18,473 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:38:18,475 [ scc.git] DEBUG 160d894 Fix display of code 2025-08-23 00:38:18,476 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:38:18,518 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:38:18,681 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:18,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2025-08-23 00:38:19,230 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:19,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:38:19,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:19,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:38:20,244 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:20,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:38:20,721 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:20,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:38:20,934 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:38:20,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:38:20,976 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-08-23 00:38:20,976 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:38:20,978 [ scc.git] DEBUG Check current status 2025-08-23 00:38:20,978 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:38:20,980 [ scc.git] DEBUG 8f3c313 Merge pull request #17 from jburel/build 2025-08-23 00:38:20,981 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:38:21,021 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:38:21,022 [ scc.git] DEBUG Repository configuration: base-branch: main 2025-08-23 00:38:21,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:21,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2025-08-23 00:38:21,706 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:21,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:38:22,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:22,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:38:22,689 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:22,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:38:23,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:23,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:38:23,359 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:38:23,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:38:23,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-08-23 00:38:23,401 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:38:23,404 [ scc.git] DEBUG Check current status 2025-08-23 00:38:23,404 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:38:23,406 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2025-08-23 00:38:23,406 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:38:23,447 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:38:23,611 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:23,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-08-23 00:38:23,834 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-08-23 00:38:23,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:24,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2025-08-23 00:38:24,419 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:24,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:38:24,910 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:25,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:38:25,370 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:25,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:38:25,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:26,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:38:26,063 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:38:26,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:38:26,105 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-08-23 00:38:26,105 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:38:26,107 [ scc.git] DEBUG Check current status 2025-08-23 00:38:26,107 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:38:26,109 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2025-08-23 00:38:26,110 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:38:26,151 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:38:26,314 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:26,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-08-23 00:38:26,535 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-08-23 00:38:26,536 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:26,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2025-08-23 00:38:27,095 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:27,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:38:27,622 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:27,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:38:28,094 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:28,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:38:28,557 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:28,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:38:28,767 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:38:28,810 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:38:28,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-08-23 00:38:28,811 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:38:28,813 [ scc.git] DEBUG Check current status 2025-08-23 00:38:28,813 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:38:28,816 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-08-23 00:38:28,816 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:38:28,858 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:38:29,022 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:29,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2025-08-23 00:38:29,588 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:29,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:38:30,100 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:30,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:38:30,596 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:30,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:38:31,065 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:31,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:38:31,258 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:38:31,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:38:31,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-08-23 00:38:31,303 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-23 00:38:31,305 [ scc.git] DEBUG Check current status 2025-08-23 00:38:31,305 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:38:31,308 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-23 00:38:31,308 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:38:31,353 [ scc.config] DEBUG Found remote.origin.url 2025-08-23 00:38:31,353 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-08-23 00:38:31,509 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:31,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-08-23 00:38:31,723 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-08-23 00:38:31,724 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:32,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2025-08-23 00:38:32,267 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:32,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-23 00:38:32,782 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:32,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-23 00:38:33,243 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:33,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-23 00:38:33,698 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:33,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-23 00:38:33,898 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:38:33,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:38:33,942 [ scc.git] DEBUG Resetting... 2025-08-23 00:38:33,942 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-23 00:38:33,950 [ scc.git] DEBUG HEAD is now at 1c1631e merge master -Dorg -Snone 2025-08-23 00:38:33,951 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-23 00:38:34,016 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2025-08-23 00:38:34,039 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-08-23 00:38:34,063 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-08-23 00:38:34,080 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-08-23 00:38:34,112 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2025-08-23 00:38:34,143 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-08-23 00:38:34,146 [ scc.git] DEBUG Check current status 2025-08-23 00:38:34,146 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-23 00:38:34,149 [ scc.git] DEBUG 1c1631e merge master -Dorg -Snone 2025-08-23 00:38:34,149 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-23 00:38:34,196 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-08-23 00:38:34,199 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-08-23 00:38:34,203 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-08-23 00:38:34,207 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-08-23 00:38:34,211 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2025-08-23 00:38:34,215 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-08-23 00:38:34,218 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-08-23 00:38:34,223 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2025-08-23 00:38:34,226 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-08-23 00:38:34,230 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-08-23 00:38:34,233 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-08-23 00:38:34,236 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-08-23 00:38:34,240 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-08-23 00:38:34,244 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-08-23 00:38:34,248 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-08-23 00:38:34,252 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-08-23 00:38:34,255 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-08-23 00:38:34,258 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-08-23 00:38:34,262 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-08-23 00:38:34,265 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-08-23 00:38:34,268 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-08-23 00:38:34,272 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-08-23 00:38:34,273 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-23 00:38:34,273 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-23 00:38:34,273 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-23 00:38:34,273 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-23 00:38:34,273 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-23 00:38:34,273 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-08-23 00:38:34,273 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:38:34,276 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:34,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-08-23 00:38:34,793 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:35,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-08-23 00:38:35,040 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:38:35,291 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:35,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-08-23 00:38:35,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:36,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:38:36,388 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:36,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-08-23 00:38:36,983 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:37,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:38:37,195 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-08-23 00:38:37,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:37,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-08-23 00:38:37,699 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:38:37,950 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:38,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-08-23 00:38:38,547 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:38,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:38:39,056 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:39,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-08-23 00:38:39,618 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:39,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:38:39,828 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-08-23 00:38:40,079 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:40,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-08-23 00:38:40,349 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:38:40,601 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:40,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-08-23 00:38:41,176 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:41,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:38:41,668 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:42,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-08-23 00:38:42,277 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:42,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:38:42,479 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-08-23 00:38:42,480 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:38:42,480 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:38:42,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:42,483 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:38:42,485 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:38:42,485 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:38:42,488 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:38:42,491 [ scc.git] DEBUG Already up to date. 2025-08-23 00:38:42,491 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-08-23 00:38:42,792 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-23 00:38:42,793 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-08-23 00:38:42,800 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-08-23 00:38:43,078 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-23 00:38:43,078 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-08-23 00:38:43,086 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-08-23 00:38:43,365 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-08-23 00:38:43,365 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-08-23 00:38:43,372 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:38:43,372 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:38:43,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:43,374 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-08-23 00:38:43,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:43,379 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-08-23 00:38:43,382 [ scc.git] DEBUG Already up to date. 2025-08-23 00:38:43,385 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:43,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:38:43,580 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-08-23 00:38:43,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:43,586 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-08-23 00:38:43,588 [ scc.git] DEBUG Already up to date. 2025-08-23 00:38:43,832 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:44,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:38:44,029 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-08-23 00:38:44,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:44,034 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-08-23 00:38:44,037 [ scc.git] DEBUG Already up to date. 2025-08-23 00:38:44,281 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:44,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:38:44,491 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:38:44,549 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:38:44,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:44,552 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:38:44,743 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:44,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2025-08-23 00:38:44,960 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:38:44,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-08-23 00:38:44,960 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:38:44,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:44,962 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:38:44,965 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:38:44,965 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:38:44,968 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:38:44,971 [ scc.git] DEBUG Already up to date. 2025-08-23 00:38:44,971 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:38:44,971 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:38:44,971 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:44,974 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:38:45,016 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:38:45,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:45,018 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:38:45,059 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:38:45,062 [ scc.git] DEBUG has no local changes 2025-08-23 00:38:45,062 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:38:45,069 [ scc.git] DEBUG [detached HEAD b9e8fcd] merge master -Dorg -Ssuccess-only 2025-08-23 00:38:45,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:38:45,069 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:38:45,212 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:45,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2025-08-23 00:38:45,792 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:46,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2025-08-23 00:38:46,293 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:46,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2025-08-23 00:38:46,560 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:38:46,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-08-23 00:38:46,561 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:38:46,561 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:46,563 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:38:46,566 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:38:46,566 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:38:46,569 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:38:46,572 [ scc.git] DEBUG Already up to date. 2025-08-23 00:38:46,572 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:38:46,572 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:38:46,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:46,575 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:38:46,617 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:38:46,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:46,619 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:38:46,660 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:38:46,663 [ scc.git] DEBUG has no local changes 2025-08-23 00:38:46,663 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:38:46,670 [ scc.git] DEBUG [detached HEAD d5a420c] merge master -Dorg -Ssuccess-only 2025-08-23 00:38:46,670 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:38:46,670 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:38:46,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:47,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2025-08-23 00:38:47,421 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:47,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None 2025-08-23 00:38:47,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:48,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-08-23 00:38:48,536 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:48,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:38:49,025 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:49,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-08-23 00:38:49,563 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:49,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:38:49,761 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names' 2025-08-23 00:38:50,014 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:50,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None 2025-08-23 00:38:50,530 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:50,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None 2025-08-23 00:38:51,050 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:51,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-08-23 00:38:51,545 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:51,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:38:52,089 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:52,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:38:52,618 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:52,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-08-23 00:38:53,182 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:53,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:38:53,439 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands' 2025-08-23 00:38:53,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:53,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2025-08-23 00:38:54,178 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:54,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2025-08-23 00:38:54,670 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:55,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-08-23 00:38:55,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:55,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:38:55,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:56,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:38:56,355 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:56,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-08-23 00:38:56,893 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:57,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:38:57,144 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2025-08-23 00:38:57,396 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:57,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2025-08-23 00:38:57,914 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:58,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2025-08-23 00:38:58,170 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:38:58,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-08-23 00:38:58,171 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:38:58,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:58,174 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:38:58,176 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:38:58,176 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:38:58,179 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:38:58,182 [ scc.git] DEBUG Already up to date. 2025-08-23 00:38:58,182 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2025-08-23 00:38:58,472 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-08-23 00:38:58,472 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2025-08-23 00:38:58,476 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-08-23 00:38:58,762 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-08-23 00:38:58,762 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-08-23 00:38:58,767 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head' 2025-08-23 00:38:59,038 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-08-23 00:38:59,038 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD 2025-08-23 00:38:59,043 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:38:59,043 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:38:59,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:59,045 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2025-08-23 00:38:59,049 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:59,051 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2025-08-23 00:38:59,062 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:38:59,065 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2025-08-23 00:38:59,065 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2025-08-23 00:38:59,068 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:59,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:38:59,275 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-08-23 00:38:59,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:59,281 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-08-23 00:38:59,291 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-08-23 00:38:59,292 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:38:59,295 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++-------- 2025-08-23 00:38:59,295 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-) 2025-08-23 00:38:59,527 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:38:59,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:38:59,745 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-08-23 00:38:59,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:38:59,751 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-08-23 00:38:59,761 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-08-23 00:38:59,762 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:38:59,766 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++------- 2025-08-23 00:38:59,766 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-) 2025-08-23 00:38:59,997 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:00,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:39:00,185 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:39:00,228 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:39:00,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:39:00,230 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:39:00,272 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:39:00,276 [ scc.git] DEBUG has no local changes 2025-08-23 00:39:00,276 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:39:00,283 [ scc.git] DEBUG [detached HEAD bdbb3b9] merge master -Dorg -Ssuccess-only 2025-08-23 00:39:00,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:39:00,284 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:39:00,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:00,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2025-08-23 00:39:01,099 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:01,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/180 HTTP/1.1" 200 None 2025-08-23 00:39:01,610 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:01,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/180/comments HTTP/1.1" 200 None 2025-08-23 00:39:02,132 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:02,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/d800b9b75e75c8f51e7a9f14e2c006d7977b44a6 HTTP/1.1" 200 None 2025-08-23 00:39:02,691 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:02,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/d800b9b75e75c8f51e7a9f14e2c006d7977b44a6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:39:03,215 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:03,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/d800b9b75e75c8f51e7a9f14e2c006d7977b44a6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:39:03,732 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:04,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2025-08-23 00:39:04,301 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:04,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-08-23 00:39:04,848 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:05,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:39:05,377 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:05,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:39:05,909 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:06,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-08-23 00:39:06,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:06,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2025-08-23 00:39:06,871 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:07,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-08-23 00:39:07,451 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:07,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2025-08-23 00:39:07,684 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-08-23 00:39:07,935 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:08,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2025-08-23 00:39:08,443 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:08,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2025-08-23 00:39:08,950 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:09,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2025-08-23 00:39:09,492 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:09,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2025-08-23 00:39:10,023 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:10,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/2407fc0352ef79e65b8de0fd481946c55cad3974 HTTP/1.1" 200 None 2025-08-23 00:39:10,600 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:10,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/2407fc0352ef79e65b8de0fd481946c55cad3974/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:39:11,153 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:11,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/2407fc0352ef79e65b8de0fd481946c55cad3974/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:39:11,678 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:11,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2025-08-23 00:39:12,175 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:12,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2025-08-23 00:39:12,690 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:12,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2025-08-23 00:39:13,204 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:13,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2025-08-23 00:39:13,725 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:13,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2025-08-23 00:39:14,212 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:14,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2025-08-23 00:39:14,756 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:15,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2025-08-23 00:39:15,293 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:15,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2025-08-23 00:39:15,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:16,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2025-08-23 00:39:16,094 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:39:16,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-08-23 00:39:16,094 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:39:16,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:39:16,097 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:39:16,100 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:39:16,100 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:39:16,104 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:39:16,118 [ scc.git] DEBUG Updating 11d3587..f7eea7c 2025-08-23 00:39:16,344 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:16,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2025-08-23 00:39:17,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:17,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2025-08-23 00:39:17,622 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:18,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2025-08-23 00:39:18,281 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:18,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2025-08-23 00:39:18,979 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:19,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2025-08-23 00:39:19,682 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:20,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2025-08-23 00:39:20,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:21,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2025-08-23 00:39:21,213 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2025-08-23 00:39:21,518 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-08-23 00:39:21,518 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2025-08-23 00:39:21,522 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:39:21,522 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:39:21,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:39:21,525 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-08-23 00:39:21,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:39:21,532 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-08-23 00:39:21,541 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:39:21,545 [ scc.git] DEBUG CHANGELOG.md | 4 ++-- 2025-08-23 00:39:21,545 [ scc.git] DEBUG src/omero_zarr/masks.py | 11 +++++------ 2025-08-23 00:39:21,545 [ scc.git] DEBUG test/integration/clitest/test_export.py | 32 ++++++++++++++++++-------------- 2025-08-23 00:39:21,545 [ scc.git] DEBUG 3 files changed, 25 insertions(+), 22 deletions(-) 2025-08-23 00:39:21,548 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:21,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:39:21,730 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:39:21,773 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:39:21,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:39:21,776 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:39:21,816 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:39:21,820 [ scc.git] DEBUG has no local changes 2025-08-23 00:39:21,820 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 180 will-moore 'Register command' (status: failure) - PR 174 will-moore 'Skip wells' (stage: draft) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..f7eea7c Previously merged: - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:39:21,827 [ scc.git] DEBUG [detached HEAD 33a91a5] merge master -Dorg -Ssuccess-only 2025-08-23 00:39:21,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:39:21,828 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:39:21,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:22,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2025-08-23 00:39:22,601 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:22,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2025-08-23 00:39:23,139 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:23,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2025-08-23 00:39:23,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:23,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/639 HTTP/1.1" 200 None 2025-08-23 00:39:23,927 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:39:24,179 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:24,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf HTTP/1.1" 200 None 2025-08-23 00:39:24,740 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:25,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:39:25,285 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:25,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:39:25,851 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:26,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf HTTP/1.1" 200 None 2025-08-23 00:39:26,431 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:26,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea5d315d21af32b6ce5529e86b939672d110c8cf?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:39:26,664 [ scc.repo] DEBUG - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' 2025-08-23 00:39:26,916 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:27,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None 2025-08-23 00:39:27,400 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:27,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None 2025-08-23 00:39:27,684 [ scc.repo] DEBUG # ... Include label: include 2025-08-23 00:39:27,935 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:28,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e HTTP/1.1" 200 None 2025-08-23 00:39:28,519 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:28,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:39:29,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:29,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e HTTP/1.1" 200 None 2025-08-23 00:39:29,531 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:29,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d15ebc233eb1b3e235bad4fe780e78c80339f39e?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:39:29,741 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position' 2025-08-23 00:39:29,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:30,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630 HTTP/1.1" 200 None 2025-08-23 00:39:30,515 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:30,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630/comments HTTP/1.1" 200 None 2025-08-23 00:39:31,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:31,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None 2025-08-23 00:39:31,625 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:31,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:39:32,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:32,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:39:32,649 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:32,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None 2025-08-23 00:39:33,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:33,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/7a71d8f456b659444095e496a4c6d2449c306a29?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:39:33,422 [ scc.repo] DEBUG - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-08-23 00:39:33,676 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:33,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None 2025-08-23 00:39:34,203 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:34,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616 HTTP/1.1" 200 None 2025-08-23 00:39:34,732 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:34,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616/comments HTTP/1.1" 200 None 2025-08-23 00:39:34,985 [ scc.repo] DEBUG # ... Include label: include 2025-08-23 00:39:35,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:35,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363 HTTP/1.1" 200 None 2025-08-23 00:39:35,828 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:36,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:39:36,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:36,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363 HTTP/1.1" 200 None 2025-08-23 00:39:36,843 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:37,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/83df5184c9424f29b3f8b578d50a0e9d0be3c363?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:39:37,079 [ scc.repo] DEBUG - PR 616 Rdornier 'Fix labels around border' 2025-08-23 00:39:37,331 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:37,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612 HTTP/1.1" 200 None 2025-08-23 00:39:37,872 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:38,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612/comments HTTP/1.1" 200 None 2025-08-23 00:39:38,394 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:38,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None 2025-08-23 00:39:38,922 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:39,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:39:39,415 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:39,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:39:39,908 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:40,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None 2025-08-23 00:39:40,466 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:40,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/9ae98a37ea474db7d473b99abb884cd4b1fdfb36?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:39:40,709 [ scc.repo] DEBUG - PR 612 will-moore 'Script version' 2025-08-23 00:39:40,962 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:41,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None 2025-08-23 00:39:41,495 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:41,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None 2025-08-23 00:39:41,992 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:42,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-08-23 00:39:42,552 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:42,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:39:43,067 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:43,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:39:43,574 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:43,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-08-23 00:39:44,047 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:44,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:39:44,261 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst' 2025-08-23 00:39:44,513 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:44,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None 2025-08-23 00:39:45,051 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:45,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605/comments HTTP/1.1" 200 None 2025-08-23 00:39:45,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:45,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895 HTTP/1.1" 200 None 2025-08-23 00:39:46,107 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:46,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:39:46,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:46,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:39:47,115 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:47,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895 HTTP/1.1" 200 None 2025-08-23 00:39:47,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:47,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8996880bb97573423561afaca6de24e03ec57895?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:39:47,843 [ scc.repo] DEBUG - PR 605 Tom-TBT 'Colorbar feature' 2025-08-23 00:39:48,095 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:48,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2025-08-23 00:39:48,654 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:48,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2025-08-23 00:39:48,959 [ scc.repo] DEBUG # ... Include label: include 2025-08-23 00:39:49,209 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:49,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25 HTTP/1.1" 200 None 2025-08-23 00:39:49,791 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:50,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:39:50,280 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:50,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25 HTTP/1.1" 200 None 2025-08-23 00:39:50,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:50,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:39:50,985 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois' 2025-08-23 00:39:50,986 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:39:50,986 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-08-23 00:39:50,986 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:39:50,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:39:50,989 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:39:50,992 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:39:50,993 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:39:50,996 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:39:51,012 [ scc.git] DEBUG Updating 9cc36cde..d2c6f5bc 2025-08-23 00:39:51,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:51,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2025-08-23 00:39:51,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:52,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2025-08-23 00:39:52,625 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:53,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2025-08-23 00:39:53,347 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:53,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2025-08-23 00:39:54,048 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:54,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2025-08-23 00:39:54,463 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2025-08-23 00:39:54,771 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-23 00:39:54,771 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2025-08-23 00:39:54,776 [ scc.git] DEBUG Calling 'git fetch origin pull/605/head' 2025-08-23 00:39:55,064 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-23 00:39:55,064 [ scc.git] DEBUG * branch refs/pull/605/head -> FETCH_HEAD 2025-08-23 00:39:55,069 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head' 2025-08-23 00:39:55,350 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-23 00:39:55,350 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD 2025-08-23 00:39:55,355 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-08-23 00:39:55,641 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-23 00:39:55,641 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-08-23 00:39:55,646 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-08-23 00:39:55,924 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-23 00:39:55,924 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-08-23 00:39:55,929 [ scc.git] DEBUG Calling 'git fetch origin pull/630/head' 2025-08-23 00:39:56,227 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-23 00:39:56,227 [ scc.git] DEBUG * branch refs/pull/630/head -> FETCH_HEAD 2025-08-23 00:39:56,232 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head' 2025-08-23 00:39:56,519 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-23 00:39:56,519 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD 2025-08-23 00:39:56,524 [ scc.git] DEBUG Calling 'git fetch origin pull/639/head' 2025-08-23 00:39:56,810 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-08-23 00:39:56,810 [ scc.git] DEBUG * branch refs/pull/639/head -> FETCH_HEAD 2025-08-23 00:39:56,815 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:39:56,815 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:39:56,815 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:39:56,817 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25' 2025-08-23 00:39:56,824 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:39:56,827 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25' 2025-08-23 00:39:56,846 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:39:56,856 [ scc.git] DEBUG .gitignore | 2 + 2025-08-23 00:39:56,857 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 274 +++++++- 2025-08-23 00:39:56,857 [ scc.git] DEBUG src/css/figure.css | 20 +- 2025-08-23 00:39:56,857 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes 2025-08-23 00:39:56,857 [ scc.git] DEBUG src/index.html | 34 +- 2025-08-23 00:39:56,857 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +- 2025-08-23 00:39:56,857 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +- 2025-08-23 00:39:56,857 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 208 +++++- 2025-08-23 00:39:56,857 [ scc.git] DEBUG src/js/shape_editor/line.js | 215 +++++- 2025-08-23 00:39:56,857 [ scc.git] DEBUG src/js/shape_editor/point.js | 203 +++++- 2025-08-23 00:39:56,857 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 207 +++++- 2025-08-23 00:39:56,857 [ scc.git] DEBUG src/js/shape_editor/rect.js | 212 +++++- 2025-08-23 00:39:56,857 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 411 ++++++++++- 2025-08-23 00:39:56,857 [ scc.git] DEBUG src/js/shape_editor/text.js | 754 +++++++++++++++++++++ 2025-08-23 00:39:56,857 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2025-08-23 00:39:56,857 [ scc.git] DEBUG src/js/views/right_panel_view.js | 121 +++- 2025-08-23 00:39:56,859 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +- 2025-08-23 00:39:56,859 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 182 ++++- 2025-08-23 00:39:56,859 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +- 2025-08-23 00:39:56,859 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:56,859 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +- 2025-08-23 00:39:56,860 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++ 2025-08-23 00:39:56,860 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 +++++++---- 2025-08-23 00:39:56,860 [ scc.git] DEBUG 22 files changed, 3249 insertions(+), 225 deletions(-) 2025-08-23 00:39:56,860 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png 2025-08-23 00:39:56,860 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js 2025-08-23 00:39:56,860 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html 2025-08-23 00:39:57,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:39:57,045 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8996880bb97573423561afaca6de24e03ec57895' 2025-08-23 00:39:57,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:39:57,055 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 605 (Colorbar feature) 8996880bb97573423561afaca6de24e03ec57895' 2025-08-23 00:39:57,085 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-08-23 00:39:57,085 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-08-23 00:39:57,085 [ scc.git] DEBUG Auto-merging src/index.html 2025-08-23 00:39:57,085 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2025-08-23 00:39:57,085 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-08-23 00:39:57,085 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2025-08-23 00:39:57,086 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:39:57,093 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 392 +++++++++++++++++++-- 2025-08-23 00:39:57,093 [ scc.git] DEBUG src/css/figure.css | 133 ++++++- 2025-08-23 00:39:57,093 [ scc.git] DEBUG src/index.html | 4 + 2025-08-23 00:39:57,093 [ scc.git] DEBUG src/js/models/panel_model.js | 169 +++++++-- 2025-08-23 00:39:57,093 [ scc.git] DEBUG src/js/views/colorbar_form_view.js | 124 +++++++ 2025-08-23 00:39:57,093 [ scc.git] DEBUG src/js/views/lutpicker.js | 67 ++-- 2025-08-23 00:39:57,093 [ scc.git] DEBUG src/js/views/panel_view.js | 79 ++++- 2025-08-23 00:39:57,093 [ scc.git] DEBUG src/js/views/right_panel_view.js | 13 + 2025-08-23 00:39:57,094 [ scc.git] DEBUG src/templates/colorbar.template.html | 42 +++ 2025-08-23 00:39:57,094 [ scc.git] DEBUG src/templates/colorbar_form.template.html | 137 +++++++ 2025-08-23 00:39:57,094 [ scc.git] DEBUG 10 files changed, 1080 insertions(+), 80 deletions(-) 2025-08-23 00:39:57,094 [ scc.git] DEBUG create mode 100644 src/js/views/colorbar_form_view.js 2025-08-23 00:39:57,094 [ scc.git] DEBUG create mode 100644 src/templates/colorbar.template.html 2025-08-23 00:39:57,094 [ scc.git] DEBUG create mode 100644 src/templates/colorbar_form.template.html 2025-08-23 00:39:57,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:57,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:39:57,495 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333' 2025-08-23 00:39:57,502 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:39:57,505 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333' 2025-08-23 00:39:57,523 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:39:57,527 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++ 2025-08-23 00:39:57,527 [ scc.git] DEBUG README.rst | 4 +- 2025-08-23 00:39:57,527 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++ 2025-08-23 00:39:57,527 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-) 2025-08-23 00:39:57,527 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md 2025-08-23 00:39:57,527 [ scc.git] DEBUG create mode 100644 docs/contributing.md 2025-08-23 00:39:57,747 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:57,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:39:57,932 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9ae98a37ea474db7d473b99abb884cd4b1fdfb36' 2025-08-23 00:39:57,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:39:57,943 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Script version) 9ae98a37ea474db7d473b99abb884cd4b1fdfb36' 2025-08-23 00:39:57,973 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-08-23 00:39:57,973 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-23 00:39:57,973 [ scc.git] DEBUG Auto-merging package.json 2025-08-23 00:39:57,973 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-08-23 00:39:57,973 [ scc.git] DEBUG Auto-merging src/index.html 2025-08-23 00:39:57,974 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:39:57,982 [ scc.git] DEBUG .bumpversion.cfg | 2 + 2025-08-23 00:39:57,982 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 7 +- 2025-08-23 00:39:57,982 [ scc.git] DEBUG omero_figure/urls.py | 3 + 2025-08-23 00:39:57,982 [ scc.git] DEBUG omero_figure/views.py | 54 ++++++++++++++ 2025-08-23 00:39:57,982 [ scc.git] DEBUG package-lock.json | 8 +- 2025-08-23 00:39:57,982 [ scc.git] DEBUG package.json | 3 +- 2025-08-23 00:39:57,982 [ scc.git] DEBUG src/css/figure.css | 2 +- 2025-08-23 00:39:57,982 [ scc.git] DEBUG src/html/dialogs/scriptManagerDialog.html | 86 ++++++++++++++++++++++ 2025-08-23 00:39:57,983 [ scc.git] DEBUG src/index.html | 20 +++-- 2025-08-23 00:39:57,983 [ scc.git] DEBUG src/js/views/figure_view.js | 54 ++++++++++++++ 2025-08-23 00:39:57,983 [ scc.git] DEBUG vite.config.js | 3 + 2025-08-23 00:39:57,983 [ scc.git] DEBUG 11 files changed, 230 insertions(+), 12 deletions(-) 2025-08-23 00:39:57,983 [ scc.git] DEBUG create mode 100644 src/html/dialogs/scriptManagerDialog.html 2025-08-23 00:39:58,184 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:58,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:39:58,378 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...83df5184c9424f29b3f8b578d50a0e9d0be3c363' 2025-08-23 00:39:58,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:39:58,390 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 83df5184c9424f29b3f8b578d50a0e9d0be3c363' 2025-08-23 00:39:58,414 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-08-23 00:39:58,414 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2025-08-23 00:39:58,414 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-08-23 00:39:58,414 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/panel_view.js 2025-08-23 00:39:58,414 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-23 00:39:58,414 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-23 00:39:58,419 [ scc.git] DEBUG Calling 'git reset --hard e9acc13f44ad95068718923b96f4ce548008108e' 2025-08-23 00:39:58,426 [ scc.git] DEBUG HEAD is now at e9acc13f merge master -Dorg -Ssuccess-only: PR 612 (Script version) 2025-08-23 00:39:58,630 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:58,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:39:58,826 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 83df5184c9424f29b3f8b578d50a0e9d0be3c363' 2025-08-23 00:39:58,831 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..d2c6f5bc061df1e02422728732b07ae7a929ccb2' 2025-08-23 00:39:58,835 [ scc.git] INFO - PR 616 Rdornier 'Fix labels around border' Conflicting PR. Removed from build [OMERO-plugins-push#512](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/views/panel_view.js - PR #605 Tom-TBT 'Colorbar feature' - src/js/views/panel_view.js --conflicts 2025-08-23 00:39:58,837 [ scc.config] DEBUG Found github.token 2025-08-23 00:39:58,837 [ scc.git] DEBUG Not adding comment to issue #616, already --conflicts. 2025-08-23 00:39:58,837 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7a71d8f456b659444095e496a4c6d2449c306a29' 2025-08-23 00:39:58,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:39:58,848 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 630 (Fix color and position for ALL new panel insets) 7a71d8f456b659444095e496a4c6d2449c306a29' 2025-08-23 00:39:58,866 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2025-08-23 00:39:58,866 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/right_panel_view.js 2025-08-23 00:39:58,866 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-23 00:39:58,867 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-23 00:39:58,872 [ scc.git] DEBUG Calling 'git reset --hard e9acc13f44ad95068718923b96f4ce548008108e' 2025-08-23 00:39:58,879 [ scc.git] DEBUG HEAD is now at e9acc13f merge master -Dorg -Ssuccess-only: PR 612 (Script version) 2025-08-23 00:39:59,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:59,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:39:59,264 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 7a71d8f456b659444095e496a4c6d2449c306a29' 2025-08-23 00:39:59,268 [ scc.git] DEBUG Calling 'git diff --name-only 9cc36cde05bde4def7b62b07c2e9ae5f66712e96..d2c6f5bc061df1e02422728732b07ae7a929ccb2' 2025-08-23 00:39:59,272 [ scc.git] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' Conflicting PR. Removed from build [OMERO-plugins-push#512](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/views/right_panel_view.js - PR #605 Tom-TBT 'Colorbar feature' - src/js/views/right_panel_view.js --conflicts 2025-08-23 00:39:59,274 [ scc.config] DEBUG Found github.token 2025-08-23 00:39:59,274 [ scc.git] DEBUG Not adding comment to issue #630, already --conflicts. 2025-08-23 00:39:59,275 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d15ebc233eb1b3e235bad4fe780e78c80339f39e' 2025-08-23 00:39:59,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:39:59,285 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) d15ebc233eb1b3e235bad4fe780e78c80339f39e' 2025-08-23 00:39:59,311 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-08-23 00:39:59,311 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-08-23 00:39:59,311 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-08-23 00:39:59,311 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html 2025-08-23 00:39:59,311 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html 2025-08-23 00:39:59,311 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-23 00:39:59,312 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-23 00:39:59,316 [ scc.git] DEBUG Calling 'git reset --hard e9acc13f44ad95068718923b96f4ce548008108e' 2025-08-23 00:39:59,324 [ scc.git] DEBUG HEAD is now at e9acc13f merge master -Dorg -Ssuccess-only: PR 612 (Script version) 2025-08-23 00:39:59,516 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:39:59,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:39:59,746 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 d15ebc233eb1b3e235bad4fe780e78c80339f39e' 2025-08-23 00:39:59,750 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..d2c6f5bc061df1e02422728732b07ae7a929ccb2' 2025-08-23 00:39:59,754 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position' Conflicting PR. Removed from build [OMERO-plugins-push#512](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/templates/scalebar_form.template.html --conflicts 2025-08-23 00:39:59,756 [ scc.config] DEBUG Found github.token 2025-08-23 00:39:59,756 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts. 2025-08-23 00:39:59,756 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea5d315d21af32b6ce5529e86b939672d110c8cf' 2025-08-23 00:39:59,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:39:59,766 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 639 (Bump vite from 6.2.6 to 6.2.7) ea5d315d21af32b6ce5529e86b939672d110c8cf' 2025-08-23 00:39:59,783 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-23 00:39:59,783 [ scc.git] DEBUG Auto-merging package.json 2025-08-23 00:39:59,784 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:39:59,788 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2025-08-23 00:39:59,788 [ scc.git] DEBUG package.json | 2 +- 2025-08-23 00:39:59,788 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2025-08-23 00:39:59,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:00,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:40:00,193 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:40:00,235 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:40:00,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:00,238 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:40:00,278 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:40:00,285 [ scc.git] DEBUG has no local changes 2025-08-23 00:40:00,285 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..d2c6f5bc Previously merged: - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 605 Tom-TBT 'Colorbar feature' - PR 610 will-moore 'Add docs/contributing.rst' - PR 612 will-moore 'Script version' - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' Conflicting PRs (not included): - PR 616 Rdornier 'Fix labels around border' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 637 Rdornier 'Fix scalebar position' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:40:00,294 [ scc.git] DEBUG [detached HEAD a61cb671] merge master -Dorg -Ssuccess-only 2025-08-23 00:40:00,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:40:00,295 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:40:00,445 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:00,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2025-08-23 00:40:00,984 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:01,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2025-08-23 00:40:01,490 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:01,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2025-08-23 00:40:01,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:02,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-08-23 00:40:02,573 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:02,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:40:03,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:03,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-08-23 00:40:03,671 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:03,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:40:03,904 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2025-08-23 00:40:03,904 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:40:03,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-08-23 00:40:03,904 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:40:03,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:03,907 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:40:03,909 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:40:03,909 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:40:03,912 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:40:03,916 [ scc.git] DEBUG Already up to date. 2025-08-23 00:40:03,916 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2025-08-23 00:40:04,211 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-08-23 00:40:04,211 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2025-08-23 00:40:04,215 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:40:04,216 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:40:04,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:04,218 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-08-23 00:40:04,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:04,224 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-08-23 00:40:04,232 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2025-08-23 00:40:04,233 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:40:04,236 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2025-08-23 00:40:04,236 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-08-23 00:40:04,238 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:04,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:40:04,497 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:40:04,539 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:40:04,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:04,542 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:40:04,582 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:40:04,586 [ scc.git] DEBUG has no local changes 2025-08-23 00:40:04,586 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:40:04,593 [ scc.git] DEBUG [detached HEAD 6c54aa1] merge master -Dorg -Ssuccess-only 2025-08-23 00:40:04,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:40:04,593 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:40:04,749 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:05,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2025-08-23 00:40:05,315 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:05,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2025-08-23 00:40:05,839 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:06,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2025-08-23 00:40:06,356 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:06,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2025-08-23 00:40:06,623 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:40:06,874 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:07,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-08-23 00:40:07,517 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:07,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:40:08,100 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:08,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:40:08,660 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:09,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-08-23 00:40:09,258 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:09,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:40:09,470 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-08-23 00:40:09,721 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:10,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2025-08-23 00:40:10,335 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:10,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2025-08-23 00:40:10,859 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:11,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2025-08-23 00:40:11,179 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:40:11,430 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:11,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-08-23 00:40:12,058 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:12,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:40:12,589 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:12,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:40:13,111 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:13,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-08-23 00:40:13,685 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:13,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:40:13,882 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-08-23 00:40:14,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:14,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2025-08-23 00:40:14,376 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:40:14,627 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:14,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-08-23 00:40:15,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:15,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:40:15,781 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:16,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:40:16,327 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:16,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-08-23 00:40:16,820 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:17,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:40:17,054 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-08-23 00:40:17,306 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:17,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2025-08-23 00:40:17,618 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:40:17,870 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:18,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-08-23 00:40:18,477 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:18,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:40:19,006 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:19,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:40:19,574 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:19,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-08-23 00:40:20,059 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:20,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:40:20,258 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-08-23 00:40:20,510 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:20,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2025-08-23 00:40:21,055 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:21,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2025-08-23 00:40:21,330 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:40:21,581 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:21,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-08-23 00:40:22,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:22,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:40:22,666 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:22,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:40:23,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:23,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-08-23 00:40:23,768 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:23,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:40:23,968 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-08-23 00:40:24,220 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:24,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2025-08-23 00:40:24,512 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:40:24,764 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:25,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-08-23 00:40:25,363 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:25,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:40:25,916 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:26,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:40:26,439 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:26,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-08-23 00:40:26,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:27,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:40:27,143 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-08-23 00:40:27,394 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:27,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2025-08-23 00:40:27,665 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:40:27,917 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:28,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-08-23 00:40:28,544 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:28,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:40:29,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:29,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:40:29,659 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:29,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-08-23 00:40:30,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:30,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:40:30,465 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-08-23 00:40:30,466 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:40:30,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-08-23 00:40:30,466 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:40:30,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:30,469 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:40:30,472 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:40:30,472 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:40:30,475 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:40:30,478 [ scc.git] DEBUG Already up to date. 2025-08-23 00:40:30,478 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2025-08-23 00:40:30,767 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-23 00:40:30,768 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2025-08-23 00:40:30,772 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2025-08-23 00:40:31,049 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-23 00:40:31,049 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2025-08-23 00:40:31,053 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2025-08-23 00:40:31,329 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-23 00:40:31,329 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2025-08-23 00:40:31,334 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2025-08-23 00:40:31,617 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-23 00:40:31,617 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2025-08-23 00:40:31,621 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2025-08-23 00:40:31,899 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-23 00:40:31,900 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2025-08-23 00:40:31,904 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2025-08-23 00:40:32,181 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-23 00:40:32,181 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2025-08-23 00:40:32,186 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2025-08-23 00:40:32,460 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-08-23 00:40:32,460 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2025-08-23 00:40:32,465 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:40:32,465 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:40:32,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:32,468 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-08-23 00:40:32,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:32,473 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-08-23 00:40:32,482 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:40:32,488 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2025-08-23 00:40:32,488 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2025-08-23 00:40:32,490 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:32,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:40:32,687 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-08-23 00:40:32,690 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:32,692 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-08-23 00:40:32,709 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-23 00:40:32,710 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:40:32,716 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2025-08-23 00:40:32,716 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2025-08-23 00:40:32,939 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:33,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:40:33,152 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-08-23 00:40:33,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:33,158 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-08-23 00:40:33,174 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-23 00:40:33,174 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-08-23 00:40:33,175 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-23 00:40:33,175 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-23 00:40:33,178 [ scc.git] DEBUG Calling 'git reset --hard ea84aa65d54ee50f6029c7a4f776d654907e510b' 2025-08-23 00:40:33,183 [ scc.git] DEBUG HEAD is now at ea84aa6 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2025-08-23 00:40:33,404 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:33,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:40:33,610 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-08-23 00:40:33,613 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-08-23 00:40:33,616 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#512](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2025-08-23 00:40:33,618 [ scc.config] DEBUG Found github.token 2025-08-23 00:40:33,618 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2025-08-23 00:40:33,618 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-08-23 00:40:33,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:33,624 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-08-23 00:40:33,640 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-23 00:40:33,642 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:40:33,646 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2025-08-23 00:40:33,646 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2025-08-23 00:40:33,862 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:34,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:40:34,099 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-08-23 00:40:34,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:34,105 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-08-23 00:40:34,121 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-23 00:40:34,122 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:40:34,127 [ scc.git] DEBUG package-lock.json | 6 +++--- 2025-08-23 00:40:34,127 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2025-08-23 00:40:34,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:34,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:40:34,549 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-08-23 00:40:34,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:34,554 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-08-23 00:40:34,571 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-23 00:40:34,571 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-08-23 00:40:34,571 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-23 00:40:34,572 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-23 00:40:34,575 [ scc.git] DEBUG Calling 'git reset --hard 8932449824920eca66371ad327e80272f68cb7a3' 2025-08-23 00:40:34,580 [ scc.git] DEBUG HEAD is now at 8932449 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-08-23 00:40:34,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:34,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:40:34,986 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-08-23 00:40:34,990 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-08-23 00:40:34,993 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#512](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2025-08-23 00:40:34,995 [ scc.config] DEBUG Found github.token 2025-08-23 00:40:34,995 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2025-08-23 00:40:34,995 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-08-23 00:40:34,998 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:35,001 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-08-23 00:40:35,019 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-23 00:40:35,019 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-08-23 00:40:35,020 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-23 00:40:35,020 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-23 00:40:35,023 [ scc.git] DEBUG Calling 'git reset --hard 8932449824920eca66371ad327e80272f68cb7a3' 2025-08-23 00:40:35,028 [ scc.git] DEBUG HEAD is now at 8932449 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-08-23 00:40:35,239 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:35,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:40:35,431 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-08-23 00:40:35,434 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-08-23 00:40:35,437 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#512](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2025-08-23 00:40:35,439 [ scc.config] DEBUG Found github.token 2025-08-23 00:40:35,440 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2025-08-23 00:40:35,440 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:40:35,479 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:40:35,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:35,482 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:40:35,523 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:40:35,528 [ scc.git] DEBUG has no local changes 2025-08-23 00:40:35,528 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:40:35,535 [ scc.git] DEBUG [detached HEAD 65e0988] merge master -Dorg -Ssuccess-only 2025-08-23 00:40:35,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:40:35,535 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:40:35,683 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:36,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2025-08-23 00:40:36,280 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:36,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2025-08-23 00:40:36,792 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:37,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2025-08-23 00:40:37,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:37,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2025-08-23 00:40:37,795 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:38,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2025-08-23 00:40:38,048 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:40:38,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:38,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-08-23 00:40:38,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:39,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:40:39,403 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:39,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:40:40,025 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:40,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-08-23 00:40:40,558 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:40,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:40:40,762 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-08-23 00:40:41,014 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:41,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2025-08-23 00:40:41,309 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:40:41,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:41,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-08-23 00:40:42,215 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:42,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:40:42,800 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:43,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:40:43,321 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:43,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-08-23 00:40:43,898 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:44,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:40:44,109 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-08-23 00:40:44,361 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:44,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2025-08-23 00:40:44,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:45,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2025-08-23 00:40:45,343 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:45,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2025-08-23 00:40:45,908 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:46,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2025-08-23 00:40:46,414 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:46,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-08-23 00:40:47,012 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:47,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:40:47,515 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:47,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-08-23 00:40:48,060 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:48,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:40:48,271 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2025-08-23 00:40:48,523 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:48,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2025-08-23 00:40:49,022 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:49,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2025-08-23 00:40:49,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:49,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-08-23 00:40:50,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:50,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:40:50,687 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:50,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-08-23 00:40:51,247 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:51,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:40:51,461 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2025-08-23 00:40:51,714 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:52,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2025-08-23 00:40:52,254 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:52,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2025-08-23 00:40:52,748 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:53,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-08-23 00:40:53,305 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:53,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:40:53,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:54,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-08-23 00:40:54,384 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:54,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:40:54,612 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2025-08-23 00:40:54,864 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:55,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2025-08-23 00:40:55,370 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:55,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2025-08-23 00:40:55,874 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:56,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2025-08-23 00:40:56,468 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:56,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:40:56,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:57,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:40:57,229 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:40:57,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-08-23 00:40:57,229 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:40:57,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:57,232 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:40:57,234 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:40:57,234 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:40:57,237 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:40:57,246 [ scc.git] DEBUG Updating 7a798ce..bb94cf8 2025-08-23 00:40:57,480 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:57,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2025-08-23 00:40:57,856 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-08-23 00:40:58,162 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-23 00:40:58,162 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-08-23 00:40:58,167 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2025-08-23 00:40:58,444 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-23 00:40:58,444 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2025-08-23 00:40:58,449 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2025-08-23 00:40:58,730 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-23 00:40:58,730 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2025-08-23 00:40:58,735 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2025-08-23 00:40:59,018 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-23 00:40:59,018 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2025-08-23 00:40:59,023 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2025-08-23 00:40:59,295 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-08-23 00:40:59,295 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2025-08-23 00:40:59,299 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:40:59,299 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:40:59,299 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:59,302 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-08-23 00:40:59,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:59,312 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-08-23 00:40:59,325 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2025-08-23 00:40:59,325 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2025-08-23 00:40:59,327 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:40:59,331 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2025-08-23 00:40:59,331 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2025-08-23 00:40:59,331 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2025-08-23 00:40:59,334 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:59,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:40:59,516 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2025-08-23 00:40:59,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:59,525 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2025-08-23 00:40:59,544 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2025-08-23 00:40:59,545 [ scc.git] DEBUG Auto-merging src/app/context.js 2025-08-23 00:40:59,545 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2025-08-23 00:40:59,545 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2025-08-23 00:40:59,546 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:40:59,550 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2025-08-23 00:40:59,550 [ scc.git] DEBUG src/app/context.js | 6 +- 2025-08-23 00:40:59,550 [ scc.git] DEBUG src/app/header.html | 5 + 2025-08-23 00:40:59,550 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2025-08-23 00:40:59,550 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2025-08-23 00:40:59,550 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2025-08-23 00:40:59,550 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2025-08-23 00:40:59,550 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2025-08-23 00:40:59,768 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:40:59,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:40:59,956 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2025-08-23 00:40:59,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:40:59,965 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2025-08-23 00:40:59,979 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2025-08-23 00:40:59,980 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:40:59,983 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2025-08-23 00:40:59,983 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2025-08-23 00:40:59,983 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2025-08-23 00:41:00,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:00,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:41:00,412 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-08-23 00:41:00,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:00,422 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-08-23 00:41:00,438 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:41:00,448 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2025-08-23 00:41:00,448 [ scc.git] DEBUG package.json | 2 +- 2025-08-23 00:41:00,448 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2025-08-23 00:41:00,664 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:00,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:41:00,860 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-08-23 00:41:00,867 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:00,870 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-08-23 00:41:00,908 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-23 00:41:00,908 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-08-23 00:41:00,908 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-23 00:41:00,909 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-23 00:41:00,911 [ scc.git] DEBUG Calling 'git reset --hard c7ad17352234d6e63d3cab8ede50b6aed35f4467' 2025-08-23 00:41:00,919 [ scc.git] DEBUG HEAD is now at c7ad173 merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2025-08-23 00:41:01,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:01,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:41:01,307 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-08-23 00:41:01,311 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4' 2025-08-23 00:41:01,314 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#512](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2025-08-23 00:41:01,317 [ scc.config] DEBUG Found github.token 2025-08-23 00:41:01,317 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2025-08-23 00:41:01,318 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:41:01,358 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:01,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:01,361 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:41:01,400 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:41:01,407 [ scc.git] DEBUG has no local changes 2025-08-23 00:41:01,407 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:41:01,414 [ scc.git] DEBUG [detached HEAD 4fdc2dd] merge master -Dorg -Ssuccess-only 2025-08-23 00:41:01,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:41:01,415 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:41:01,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:01,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2025-08-23 00:41:02,111 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:02,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2025-08-23 00:41:02,610 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:02,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-08-23 00:41:03,163 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:03,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:41:03,697 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:03,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-08-23 00:41:04,173 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:04,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:41:04,390 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-23 00:41:04,642 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:04,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2025-08-23 00:41:05,158 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:05,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2025-08-23 00:41:05,698 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:05,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-08-23 00:41:06,243 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:06,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:41:06,747 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:06,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-08-23 00:41:07,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:07,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:41:07,479 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2025-08-23 00:41:07,479 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:41:07,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-08-23 00:41:07,479 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:07,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:07,482 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:41:07,485 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:41:07,485 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:41:07,488 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:41:07,491 [ scc.git] DEBUG Already up to date. 2025-08-23 00:41:07,492 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2025-08-23 00:41:07,780 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-08-23 00:41:07,780 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2025-08-23 00:41:07,785 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2025-08-23 00:41:08,062 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-08-23 00:41:08,062 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2025-08-23 00:41:08,066 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:41:08,066 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:08,066 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:08,069 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-08-23 00:41:08,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:08,075 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-08-23 00:41:08,084 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:41:08,088 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2025-08-23 00:41:08,088 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2025-08-23 00:41:08,088 [ scc.git] DEBUG requirements.txt | 2 +- 2025-08-23 00:41:08,088 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2025-08-23 00:41:08,088 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2025-08-23 00:41:08,088 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2025-08-23 00:41:08,091 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:08,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:41:08,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-08-23 00:41:08,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:08,319 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-08-23 00:41:08,328 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:41:08,331 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-08-23 00:41:08,331 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-23 00:41:08,564 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:08,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:41:08,771 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:41:08,814 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:08,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:08,817 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:41:08,859 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:41:08,864 [ scc.git] DEBUG has no local changes 2025-08-23 00:41:08,864 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:41:08,872 [ scc.git] DEBUG [detached HEAD 2a46135] merge master -Dorg -Ssuccess-only 2025-08-23 00:41:08,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:41:08,872 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:41:09,024 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:09,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2025-08-23 00:41:09,600 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:09,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2025-08-23 00:41:10,113 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:10,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2025-08-23 00:41:10,715 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:11,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-08-23 00:41:11,280 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:11,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:41:11,793 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:12,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-08-23 00:41:12,378 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:12,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:41:12,590 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-08-23 00:41:12,841 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:13,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2025-08-23 00:41:13,332 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:13,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2025-08-23 00:41:13,850 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:14,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-08-23 00:41:14,395 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:14,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:41:14,913 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:15,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-08-23 00:41:15,399 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:15,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:41:15,620 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-08-23 00:41:15,620 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:41:15,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-08-23 00:41:15,620 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:15,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:15,623 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:41:15,625 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:41:15,625 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:41:15,629 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:41:15,636 [ scc.git] DEBUG Updating 3cd120c..55060a2 2025-08-23 00:41:15,872 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:16,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2025-08-23 00:41:16,315 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2025-08-23 00:41:16,609 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-08-23 00:41:16,609 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2025-08-23 00:41:16,614 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2025-08-23 00:41:16,892 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-08-23 00:41:16,892 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2025-08-23 00:41:16,897 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:41:16,897 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:16,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:16,899 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-08-23 00:41:16,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:16,906 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-08-23 00:41:16,920 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2025-08-23 00:41:16,920 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2025-08-23 00:41:16,920 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-08-23 00:41:16,920 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-08-23 00:41:16,920 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-23 00:41:16,921 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-23 00:41:16,923 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-08-23 00:41:16,928 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-08-23 00:41:16,931 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:17,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:41:17,131 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-08-23 00:41:17,136 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2025-08-23 00:41:17,139 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#512](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2025-08-23 00:41:17,141 [ scc.config] DEBUG Found github.token 2025-08-23 00:41:17,141 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2025-08-23 00:41:17,141 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2025-08-23 00:41:17,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:17,148 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2025-08-23 00:41:17,163 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-08-23 00:41:17,164 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-08-23 00:41:17,164 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2025-08-23 00:41:17,164 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-23 00:41:17,164 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-23 00:41:17,167 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-08-23 00:41:17,172 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-08-23 00:41:17,383 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:17,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:41:17,613 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2025-08-23 00:41:17,618 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2025-08-23 00:41:17,621 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#512](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2025-08-23 00:41:17,623 [ scc.config] DEBUG Found github.token 2025-08-23 00:41:17,623 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2025-08-23 00:41:17,623 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:41:17,667 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:17,667 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:17,669 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:41:17,711 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:41:17,715 [ scc.git] DEBUG has no local changes 2025-08-23 00:41:17,715 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:41:17,722 [ scc.git] DEBUG [detached HEAD 96f74a6] merge master -Dorg -Ssuccess-only 2025-08-23 00:41:17,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:41:17,723 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:41:17,865 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:18,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2025-08-23 00:41:18,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:18,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2025-08-23 00:41:19,027 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:19,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-08-23 00:41:19,556 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:19,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:41:20,088 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:20,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:41:20,636 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:20,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-08-23 00:41:21,114 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:21,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:41:21,327 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-23 00:41:21,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:21,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2025-08-23 00:41:21,838 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:41:22,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:22,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-08-23 00:41:22,663 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:22,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:41:23,208 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:23,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:41:23,766 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:24,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-08-23 00:41:24,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:24,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:41:24,511 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-08-23 00:41:24,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:25,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2025-08-23 00:41:25,038 [ scc.repo] DEBUG # ... Include label: dependencies 2025-08-23 00:41:25,290 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:25,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-08-23 00:41:25,906 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:26,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:41:26,481 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:26,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:41:27,070 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:27,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-08-23 00:41:27,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:27,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:41:27,874 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-08-23 00:41:28,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:28,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2025-08-23 00:41:28,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:28,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2025-08-23 00:41:29,139 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:29,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2025-08-23 00:41:29,635 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:29,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2025-08-23 00:41:30,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:30,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2025-08-23 00:41:30,670 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:30,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2025-08-23 00:41:31,161 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:31,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2025-08-23 00:41:31,445 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:41:31,445 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-08-23 00:41:31,445 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:31,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:31,448 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:41:31,450 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:41:31,451 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:41:31,454 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:41:31,457 [ scc.git] DEBUG Already up to date. 2025-08-23 00:41:31,457 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2025-08-23 00:41:31,748 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-08-23 00:41:31,748 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2025-08-23 00:41:31,753 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2025-08-23 00:41:32,029 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-08-23 00:41:32,029 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2025-08-23 00:41:32,034 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2025-08-23 00:41:32,308 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-08-23 00:41:32,308 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2025-08-23 00:41:32,313 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:41:32,313 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:32,314 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:32,316 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2025-08-23 00:41:32,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:32,322 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2025-08-23 00:41:32,330 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:41:32,334 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2025-08-23 00:41:32,334 [ scc.git] DEBUG package.json | 2 +- 2025-08-23 00:41:32,334 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2025-08-23 00:41:32,337 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:32,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:41:32,566 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2025-08-23 00:41:32,569 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:32,572 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2025-08-23 00:41:32,583 [ scc.git] DEBUG Auto-merging package-lock.json 2025-08-23 00:41:32,583 [ scc.git] DEBUG Auto-merging package.json 2025-08-23 00:41:32,584 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:41:32,588 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2025-08-23 00:41:32,588 [ scc.git] DEBUG package.json | 2 +- 2025-08-23 00:41:32,588 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2025-08-23 00:41:32,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:33,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:41:33,012 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-08-23 00:41:33,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:33,018 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-08-23 00:41:33,028 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:41:33,031 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-08-23 00:41:33,031 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-23 00:41:33,264 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:33,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:41:33,472 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:41:33,516 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:33,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:33,519 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:41:33,560 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:41:33,565 [ scc.git] DEBUG has no local changes 2025-08-23 00:41:33,565 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:41:33,572 [ scc.git] DEBUG [detached HEAD 17e6117] merge master -Dorg -Ssuccess-only 2025-08-23 00:41:33,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:41:33,572 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:41:33,724 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:33,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2 2025-08-23 00:41:33,942 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:41:33,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-08-23 00:41:33,942 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:33,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:33,946 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:41:33,949 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:41:33,949 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:41:33,952 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:41:33,955 [ scc.git] DEBUG Already up to date. 2025-08-23 00:41:33,955 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:41:33,955 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:33,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:33,958 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:41:33,999 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:33,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:34,002 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:41:34,041 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:41:34,045 [ scc.git] DEBUG has no local changes 2025-08-23 00:41:34,045 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:41:34,051 [ scc.git] DEBUG [detached HEAD 65be25d] merge master -Dorg -Ssuccess-only 2025-08-23 00:41:34,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:41:34,052 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:41:34,195 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:34,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2025-08-23 00:41:34,786 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:35,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2025-08-23 00:41:35,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:35,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2025-08-23 00:41:35,803 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:36,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-08-23 00:41:36,394 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:36,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:41:36,968 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:37,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:41:37,503 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:37,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-08-23 00:41:38,073 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:38,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2025-08-23 00:41:38,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:38,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-08-23 00:41:39,063 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:39,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2025-08-23 00:41:39,293 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2025-08-23 00:41:39,545 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:39,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2025-08-23 00:41:39,809 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:41:39,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-08-23 00:41:39,809 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:39,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:39,812 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:41:39,815 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:41:39,815 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:41:39,818 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:41:39,821 [ scc.git] DEBUG Already up to date. 2025-08-23 00:41:39,821 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2025-08-23 00:41:40,105 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-08-23 00:41:40,105 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2025-08-23 00:41:40,109 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:41:40,109 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:40,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:40,112 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2025-08-23 00:41:40,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:40,117 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2025-08-23 00:41:40,126 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:41:40,129 [ scc.git] DEBUG setup.py | 4 +- 2025-08-23 00:41:40,129 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2025-08-23 00:41:40,129 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2025-08-23 00:41:40,129 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2025-08-23 00:41:40,132 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:40,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:41:40,340 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:41:40,383 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:40,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:40,385 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:41:40,426 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:41:40,429 [ scc.git] DEBUG has no local changes 2025-08-23 00:41:40,430 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:41:40,436 [ scc.git] DEBUG [detached HEAD 8f32f54] merge master -Dorg -Ssuccess-only 2025-08-23 00:41:40,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:41:40,437 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:41:40,592 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:40,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2025-08-23 00:41:41,172 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:41,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2025-08-23 00:41:41,682 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:41,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2025-08-23 00:41:42,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:42,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-08-23 00:41:42,749 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:43,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:41:43,257 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:43,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-08-23 00:41:43,922 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:44,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:41:44,144 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2025-08-23 00:41:44,144 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:41:44,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-08-23 00:41:44,144 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:44,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:44,147 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:41:44,149 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:41:44,149 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:41:44,152 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:41:44,155 [ scc.git] DEBUG Already up to date. 2025-08-23 00:41:44,155 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-08-23 00:41:44,440 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-08-23 00:41:44,440 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-08-23 00:41:44,445 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:41:44,445 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:44,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:44,447 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-08-23 00:41:44,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:44,453 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-08-23 00:41:44,462 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2025-08-23 00:41:44,462 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2025-08-23 00:41:44,462 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2025-08-23 00:41:44,462 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2025-08-23 00:41:44,462 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2025-08-23 00:41:44,462 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2025-08-23 00:41:44,462 [ scc.git] DEBUG Auto-merging setup.py 2025-08-23 00:41:44,462 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2025-08-23 00:41:44,462 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-23 00:41:44,462 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-23 00:41:44,466 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2025-08-23 00:41:44,470 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2025-08-23 00:41:44,473 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:44,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:41:44,682 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-08-23 00:41:44,685 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2025-08-23 00:41:44,689 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#512](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/signup_settings.py - setup.py - omero_signup/urls.py --conflicts 2025-08-23 00:41:44,691 [ scc.config] DEBUG Found github.token 2025-08-23 00:41:44,691 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2025-08-23 00:41:44,691 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:41:44,733 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:44,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:44,735 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:41:44,774 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:41:44,778 [ scc.git] DEBUG has no local changes 2025-08-23 00:41:44,778 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:41:44,785 [ scc.git] DEBUG [detached HEAD 4cd1921] merge master -Dorg -Ssuccess-only 2025-08-23 00:41:44,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:41:44,785 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:41:44,934 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:45,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2025-08-23 00:41:45,506 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:45,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None 2025-08-23 00:41:46,011 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:46,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-08-23 00:41:46,588 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:46,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:41:47,100 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:47,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:41:47,605 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:47,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-08-23 00:41:48,121 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:48,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:41:48,318 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps' 2025-08-23 00:41:48,570 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:48,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2025-08-23 00:41:49,120 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:49,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2025-08-23 00:41:49,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:49,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2025-08-23 00:41:50,225 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:50,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:41:50,740 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:51,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:41:51,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:51,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2025-08-23 00:41:51,809 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:52,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2025-08-23 00:41:52,307 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:52,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2025-08-23 00:41:52,804 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:53,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2025-08-23 00:41:53,339 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:53,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-08-23 00:41:53,865 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:54,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:41:54,407 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:54,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-08-23 00:41:54,897 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:55,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:41:55,097 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-08-23 00:41:55,097 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:41:55,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-08-23 00:41:55,097 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:55,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:55,101 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:41:55,103 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:41:55,103 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:41:55,106 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:41:55,109 [ scc.git] DEBUG Already up to date. 2025-08-23 00:41:55,109 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2025-08-23 00:41:55,404 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-08-23 00:41:55,404 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2025-08-23 00:41:55,408 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head' 2025-08-23 00:41:55,695 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-08-23 00:41:55,695 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD 2025-08-23 00:41:55,700 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:41:55,700 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:55,700 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:55,703 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2025-08-23 00:41:55,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:55,710 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2025-08-23 00:41:55,733 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:41:55,737 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2025-08-23 00:41:55,737 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2025-08-23 00:41:55,737 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2025-08-23 00:41:55,737 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2025-08-23 00:41:55,737 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2025-08-23 00:41:55,737 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2025-08-23 00:41:55,737 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2025-08-23 00:41:55,737 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2025-08-23 00:41:55,737 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2025-08-23 00:41:55,737 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2025-08-23 00:41:55,738 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2025-08-23 00:41:55,740 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2025-08-23 00:41:55,740 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2025-08-23 00:41:55,740 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2025-08-23 00:41:55,740 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:55,740 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2025-08-23 00:41:55,740 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2025-08-23 00:41:55,740 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2025-08-23 00:41:55,740 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2025-08-23 00:41:55,740 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2025-08-23 00:41:55,740 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2025-08-23 00:41:55,740 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2025-08-23 00:41:55,740 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2025-08-23 00:41:55,740 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2025-08-23 00:41:55,740 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2025-08-23 00:41:55,740 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2025-08-23 00:41:55,740 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2025-08-23 00:41:55,740 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2025-08-23 00:41:55,740 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2025-08-23 00:41:55,740 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2025-08-23 00:41:55,740 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2025-08-23 00:41:55,740 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2025-08-23 00:41:55,740 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2025-08-23 00:41:55,740 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2025-08-23 00:41:55,740 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2025-08-23 00:41:55,740 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2025-08-23 00:41:55,740 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2025-08-23 00:41:55,740 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2025-08-23 00:41:55,741 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2025-08-23 00:41:55,741 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2025-08-23 00:41:55,741 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2025-08-23 00:41:55,741 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2025-08-23 00:41:55,741 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2025-08-23 00:41:55,741 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2025-08-23 00:41:55,741 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2025-08-23 00:41:55,741 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2025-08-23 00:41:55,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:41:55,950 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-08-23 00:41:55,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:55,957 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-08-23 00:41:55,967 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:41:55,970 [ scc.git] DEBUG docker | 1 + 2025-08-23 00:41:55,970 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2025-08-23 00:41:56,202 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:56,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:41:56,407 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:41:56,449 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:56,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:56,452 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:41:56,493 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:41:56,497 [ scc.git] DEBUG has no local changes 2025-08-23 00:41:56,497 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:41:56,503 [ scc.git] DEBUG [detached HEAD be74d43] merge master -Dorg -Ssuccess-only 2025-08-23 00:41:56,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:41:56,504 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:41:56,659 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:56,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2025-08-23 00:41:56,913 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:41:56,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-08-23 00:41:56,913 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:56,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:56,916 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:41:56,919 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:41:56,919 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:41:56,922 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:41:56,925 [ scc.git] DEBUG Already up to date. 2025-08-23 00:41:56,925 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:41:56,925 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:56,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:56,928 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:41:56,969 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:56,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:56,971 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:41:57,010 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:41:57,014 [ scc.git] DEBUG has no local changes 2025-08-23 00:41:57,014 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:41:57,020 [ scc.git] DEBUG [detached HEAD 390365f] merge master -Dorg -Ssuccess-only 2025-08-23 00:41:57,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:41:57,021 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:41:57,165 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:57,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2025-08-23 00:41:57,371 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:41:57,372 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-08-23 00:41:57,372 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:57,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:57,374 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:41:57,377 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:41:57,377 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:41:57,380 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:41:57,388 [ scc.git] DEBUG Updating deab817..160d894 2025-08-23 00:41:57,624 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:58,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2025-08-23 00:41:58,114 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:41:58,114 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:58,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:58,117 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:41:58,163 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:41:58,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:41:58,166 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:41:58,207 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:41:58,211 [ scc.git] DEBUG has no local changes 2025-08-23 00:41:58,211 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:41:58,217 [ scc.git] DEBUG [detached HEAD effb98b] merge master -Dorg -Ssuccess-only 2025-08-23 00:41:58,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:41:58,218 [ scc.git] INFO Overriding base-branch from master to main 2025-08-23 00:41:58,218 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:41:58,366 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:58,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2025-08-23 00:41:58,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:59,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None 2025-08-23 00:41:59,462 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:41:59,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None 2025-08-23 00:41:59,952 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:00,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None 2025-08-23 00:42:00,564 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:00,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:42:01,084 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:01,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:42:01,600 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:01,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2025-08-23 00:42:02,096 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:02,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2025-08-23 00:42:02,616 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:02,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2025-08-23 00:42:03,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:03,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-08-23 00:42:03,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:03,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:42:04,220 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:04,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-08-23 00:42:04,836 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:05,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:42:05,046 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-08-23 00:42:05,046 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:42:05,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-08-23 00:42:05,047 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:42:05,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:05,049 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2025-08-23 00:42:05,052 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:42:05,052 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2025-08-23 00:42:05,055 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2025-08-23 00:42:05,058 [ scc.git] DEBUG Already up to date. 2025-08-23 00:42:05,058 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2025-08-23 00:42:05,350 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-08-23 00:42:05,350 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2025-08-23 00:42:05,355 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:42:05,355 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:42:05,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:05,357 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-08-23 00:42:05,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:05,362 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-08-23 00:42:05,370 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2025-08-23 00:42:05,370 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2025-08-23 00:42:05,371 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-23 00:42:05,371 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-23 00:42:05,374 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-08-23 00:42:05,378 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build 2025-08-23 00:42:05,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:05,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:05,580 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-08-23 00:42:05,583 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-08-23 00:42:05,586 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#512](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2025-08-23 00:42:05,588 [ scc.config] DEBUG Found github.token 2025-08-23 00:42:05,588 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2025-08-23 00:42:05,588 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:42:05,630 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:42:05,630 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:05,633 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:42:05,674 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:42:05,678 [ scc.git] DEBUG has no local changes 2025-08-23 00:42:05,678 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:42:05,684 [ scc.git] DEBUG [detached HEAD 0f1a034] merge master -Dorg -Ssuccess-only 2025-08-23 00:42:05,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:05,685 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:42:05,832 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:06,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2025-08-23 00:42:06,060 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:42:06,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-08-23 00:42:06,060 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:42:06,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:06,063 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:42:06,065 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:42:06,065 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:42:06,068 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:42:06,071 [ scc.git] DEBUG Already up to date. 2025-08-23 00:42:06,071 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:42:06,071 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:42:06,071 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:06,073 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:42:06,113 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:42:06,113 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:06,116 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:42:06,156 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:42:06,160 [ scc.git] DEBUG has no local changes 2025-08-23 00:42:06,160 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:42:06,166 [ scc.git] DEBUG [detached HEAD bf41b4c] merge master -Dorg -Ssuccess-only 2025-08-23 00:42:06,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:06,166 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:42:06,312 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:06,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2025-08-23 00:42:06,519 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:42:06,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-08-23 00:42:06,519 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:42:06,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:06,521 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:42:06,523 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:42:06,524 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:42:06,526 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:42:06,530 [ scc.git] DEBUG Already up to date. 2025-08-23 00:42:06,530 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:42:06,530 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:42:06,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:06,532 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:42:06,573 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:42:06,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:06,575 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:42:06,616 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:42:06,620 [ scc.git] DEBUG has no local changes 2025-08-23 00:42:06,620 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:42:06,626 [ scc.git] DEBUG [detached HEAD 7dc05f9] merge master -Dorg -Ssuccess-only 2025-08-23 00:42:06,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:06,627 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:42:06,771 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:07,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2025-08-23 00:42:07,294 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:07,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2025-08-23 00:42:07,871 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:08,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2025-08-23 00:42:08,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:08,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-08-23 00:42:08,929 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:09,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:42:09,399 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:09,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-08-23 00:42:09,968 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:10,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:42:10,184 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2025-08-23 00:42:10,184 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:42:10,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-08-23 00:42:10,184 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:42:10,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:10,187 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-23 00:42:10,190 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:42:10,190 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-23 00:42:10,193 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-23 00:42:10,196 [ scc.git] DEBUG Already up to date. 2025-08-23 00:42:10,196 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2025-08-23 00:42:10,487 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2025-08-23 00:42:10,488 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2025-08-23 00:42:10,493 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:42:10,493 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:42:10,493 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:10,495 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-08-23 00:42:10,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:10,500 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-08-23 00:42:10,509 [ scc.git] DEBUG Auto-merging Dockerfile 2025-08-23 00:42:10,509 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2025-08-23 00:42:10,509 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-23 00:42:10,510 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-23 00:42:10,513 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-08-23 00:42:10,518 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-08-23 00:42:10,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:10,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:10,713 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-08-23 00:42:10,716 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-08-23 00:42:10,718 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#512](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2025-08-23 00:42:10,721 [ scc.config] DEBUG Found github.token 2025-08-23 00:42:10,721 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2025-08-23 00:42:10,721 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:42:10,762 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:42:10,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:10,764 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:42:10,805 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:42:10,809 [ scc.git] DEBUG has no local changes 2025-08-23 00:42:10,809 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:42:10,816 [ scc.git] DEBUG [detached HEAD 59ef620] merge master -Dorg -Ssuccess-only 2025-08-23 00:42:10,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:10,817 [ scc.git] INFO Overriding base-branch from master to develop 2025-08-23 00:42:10,817 [ scc.repo] DEBUG ## PRs found: 2025-08-23 00:42:10,965 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:11,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-08-23 00:42:11,531 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:11,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-08-23 00:42:12,038 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:12,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-08-23 00:42:12,559 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:12,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-23 00:42:13,024 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:13,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:42:13,558 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:13,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-23 00:42:14,074 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:14,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-23 00:42:14,558 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:14,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:42:14,759 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-23 00:42:15,010 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:15,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-08-23 00:42:15,498 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:15,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-08-23 00:42:15,987 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:16,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-23 00:42:16,465 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:16,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-23 00:42:16,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:17,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-23 00:42:17,466 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:17,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-08-23 00:42:17,663 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-23 00:42:17,915 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:18,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-08-23 00:42:18,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:18,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-08-23 00:42:18,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:19,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-08-23 00:42:19,478 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:19,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-08-23 00:42:19,778 [ scc.repo] DEBUG ## Branches found: 2025-08-23 00:42:19,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-08-23 00:42:19,778 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:42:19,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:19,781 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-08-23 00:42:19,783 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-23 00:42:19,783 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-08-23 00:42:19,787 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-08-23 00:42:19,798 [ scc.git] DEBUG Updating 4b4c755..573db34 2025-08-23 00:42:20,029 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:20,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2025-08-23 00:42:20,711 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:21,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2025-08-23 00:42:21,172 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-08-23 00:42:21,485 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-08-23 00:42:21,485 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-08-23 00:42:21,490 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-08-23 00:42:21,778 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-08-23 00:42:21,778 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-08-23 00:42:21,783 [ scc.git] DEBUG ## Unique users: [] 2025-08-23 00:42:21,783 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:42:21,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:21,785 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-23 00:42:21,791 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:21,794 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-23 00:42:21,805 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-08-23 00:42:21,805 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-23 00:42:21,806 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-23 00:42:21,808 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150' 2025-08-23 00:42:21,813 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-23 00:42:21,816 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:22,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:22,026 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-23 00:42:22,031 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150' 2025-08-23 00:42:22,035 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#512](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-08-23 00:42:22,037 [ scc.config] DEBUG Found github.token 2025-08-23 00:42:22,037 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-08-23 00:42:22,037 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-23 00:42:22,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:22,044 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-23 00:42:22,054 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-23 00:42:22,057 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-08-23 00:42:22,058 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-08-23 00:42:22,278 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:22,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:22,482 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-23 00:42:22,524 [ scc.git] DEBUG Get sha1 of %s 2025-08-23 00:42:22,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-23 00:42:22,526 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:42:22,568 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:42:22,572 [ scc.git] DEBUG has no local changes 2025-08-23 00:42:22,572 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..573db34 Previously merged: - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:42:22,579 [ scc.git] DEBUG [detached HEAD 4d95a47] merge master -Dorg -Ssuccess-only 2025-08-23 00:42:22,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:22,579 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-23 00:42:22,658 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2025-08-23 00:42:22,734 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:22,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:22,941 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2025-08-23 00:42:22,943 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2025-08-23 00:42:23,188 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:23,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:23,391 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2025-08-23 00:42:23,394 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2025-08-23 00:42:23,638 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:23,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:23,834 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2025-08-23 00:42:23,836 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2025-08-23 00:42:24,082 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:24,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:24,274 [ scc.config] DEBUG Found submodule.omero-figure.url 2025-08-23 00:42:24,519 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:24,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:24,713 [ scc.config] DEBUG Found submodule.omero-figure.branch 2025-08-23 00:42:24,715 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2025-08-23 00:42:24,961 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:25,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:25,168 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2025-08-23 00:42:25,170 [ scc.config] DEBUG Found submodule.omero-gallery.url 2025-08-23 00:42:25,415 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:25,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:25,634 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2025-08-23 00:42:25,636 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2025-08-23 00:42:25,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:26,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:26,075 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2025-08-23 00:42:26,077 [ scc.config] DEBUG Found submodule.omero-mapr.url 2025-08-23 00:42:26,322 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:26,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:26,530 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2025-08-23 00:42:26,532 [ scc.config] DEBUG Found submodule.omero-metadata.url 2025-08-23 00:42:26,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:26,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:26,981 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2025-08-23 00:42:26,983 [ scc.config] DEBUG Found submodule.omero-parade.url 2025-08-23 00:42:27,228 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:27,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:27,424 [ scc.config] DEBUG Found submodule.omero-parade.branch 2025-08-23 00:42:27,426 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2025-08-23 00:42:27,671 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:27,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:27,870 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2025-08-23 00:42:27,872 [ scc.config] DEBUG Found submodule.omero-rois.url 2025-08-23 00:42:28,117 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:28,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:28,352 [ scc.config] DEBUG Found submodule.omero-signup.url 2025-08-23 00:42:28,598 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:28,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:28,810 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2025-08-23 00:42:29,056 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:29,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:29,251 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2025-08-23 00:42:29,253 [ scc.config] DEBUG Found submodule.omero-upload.url 2025-08-23 00:42:29,498 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:29,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:29,704 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2025-08-23 00:42:29,949 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:30,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:30,146 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2025-08-23 00:42:30,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:30,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:30,592 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2025-08-23 00:42:30,594 [ scc.config] DEBUG Found submodule.omero-weberror.url 2025-08-23 00:42:30,839 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:31,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:31,032 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2025-08-23 00:42:31,034 [ scc.config] DEBUG Found submodule.omero-webtest.url 2025-08-23 00:42:31,279 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:31,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:31,469 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2025-08-23 00:42:31,471 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2025-08-23 00:42:31,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:31,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:31,914 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2025-08-23 00:42:31,916 [ scc.config] DEBUG Found submodule.scripts.url 2025-08-23 00:42:32,161 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-23 00:42:32,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-23 00:42:32,409 [ scc.config] DEBUG Found submodule.scripts.branch 2025-08-23 00:42:32,409 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-23 00:42:32,501 [ scc.git] DEBUG has local changes 2025-08-23 00:42:32,501 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' Repository: ome/omero-cli-zarr Excluded PRs: - PR 180 will-moore 'Register command' (status: failure) - PR 174 will-moore 'Skip wells' (stage: draft) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..f7eea7c Previously merged: - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..d2c6f5bc Previously merged: - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 605 Tom-TBT 'Colorbar feature' - PR 610 will-moore 'Add docs/contributing.rst' - PR 612 will-moore 'Script version' - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' Conflicting PRs (not included): - PR 616 Rdornier 'Fix labels around border' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 637 Rdornier 'Fix scalebar position' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..573db34 Previously merged: - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#512 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/512/)' 2025-08-23 00:42:32,514 [ scc.git] DEBUG [detached HEAD fe25c0d] merge master -Dorg -Ssuccess-only 2025-08-23 00:42:32,514 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2025-08-23 00:42:32,514 [ scc.merge] INFO Repository: ome/omero-plugins 2025-08-23 00:42:32,514 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,514 [ scc.merge] INFO 2025-08-23 00:42:32,514 [ scc.merge] INFO Merged PRs: 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-08-23 00:42:32,515 [ scc.merge] INFO 2025-08-23 00:42:32,515 [ scc.merge] INFO Repository: ome/minimal-omero-client 2025-08-23 00:42:32,515 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,515 [ scc.merge] INFO 2025-08-23 00:42:32,515 [ scc.merge] INFO 2025-08-23 00:42:32,515 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2025-08-23 00:42:32,515 [ scc.merge] INFO Excluded PRs: 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2025-08-23 00:42:32,515 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,515 [ scc.merge] INFO 2025-08-23 00:42:32,515 [ scc.merge] INFO 2025-08-23 00:42:32,515 [ scc.merge] INFO Repository: ome/omero-cli-render 2025-08-23 00:42:32,515 [ scc.merge] INFO Excluded PRs: 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2025-08-23 00:42:32,515 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,515 [ scc.merge] INFO 2025-08-23 00:42:32,515 [ scc.merge] INFO Merged PRs: 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2025-08-23 00:42:32,515 [ scc.merge] INFO 2025-08-23 00:42:32,515 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2025-08-23 00:42:32,515 [ scc.merge] INFO Excluded PRs: 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 180 will-moore 'Register command' (status: failure) 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' (stage: draft) 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2025-08-23 00:42:32,515 [ scc.merge] INFO Updating 11d3587..f7eea7c 2025-08-23 00:42:32,515 [ scc.merge] INFO Previously merged: 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2025-08-23 00:42:32,515 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-23 00:42:32,516 [ scc.merge] INFO 2025-08-23 00:42:32,516 [ scc.merge] INFO Merged PRs: 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-08-23 00:42:32,516 [ scc.merge] INFO 2025-08-23 00:42:32,516 [ scc.merge] INFO Repository: ome/omero-figure 2025-08-23 00:42:32,516 [ scc.merge] INFO Excluded PRs: 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft) 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2025-08-23 00:42:32,516 [ scc.merge] INFO Updating 9cc36cde..d2c6f5bc 2025-08-23 00:42:32,516 [ scc.merge] INFO Previously merged: 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-23 00:42:32,516 [ scc.merge] INFO 2025-08-23 00:42:32,516 [ scc.merge] INFO Merged PRs: 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7' 2025-08-23 00:42:32,516 [ scc.merge] INFO 2025-08-23 00:42:32,516 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2025-08-23 00:42:32,516 [ scc.merge] INFO 2025-08-23 00:42:32,516 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2025-08-23 00:42:32,516 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,516 [ scc.merge] INFO 2025-08-23 00:42:32,516 [ scc.merge] INFO Merged PRs: 2025-08-23 00:42:32,516 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2025-08-23 00:42:32,516 [ scc.merge] INFO 2025-08-23 00:42:32,516 [ scc.merge] INFO Repository: ome/omero-gallery 2025-08-23 00:42:32,517 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,517 [ scc.merge] INFO 2025-08-23 00:42:32,517 [ scc.merge] INFO Merged PRs: 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-08-23 00:42:32,517 [ scc.merge] INFO 2025-08-23 00:42:32,517 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-08-23 00:42:32,517 [ scc.merge] INFO 2025-08-23 00:42:32,517 [ scc.merge] INFO Repository: ome/omero-iviewer 2025-08-23 00:42:32,517 [ scc.merge] INFO Excluded PRs: 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft) 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2025-08-23 00:42:32,517 [ scc.merge] INFO Updating 7a798ce..bb94cf8 2025-08-23 00:42:32,517 [ scc.merge] INFO Previously merged: 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-23 00:42:32,517 [ scc.merge] INFO 2025-08-23 00:42:32,517 [ scc.merge] INFO Merged PRs: 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-08-23 00:42:32,517 [ scc.merge] INFO 2025-08-23 00:42:32,517 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-08-23 00:42:32,517 [ scc.merge] INFO 2025-08-23 00:42:32,517 [ scc.merge] INFO Repository: ome/omero-mapr 2025-08-23 00:42:32,517 [ scc.merge] INFO Excluded PRs: 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2025-08-23 00:42:32,517 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,517 [ scc.merge] INFO 2025-08-23 00:42:32,517 [ scc.merge] INFO Merged PRs: 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2025-08-23 00:42:32,517 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-23 00:42:32,518 [ scc.merge] INFO 2025-08-23 00:42:32,518 [ scc.merge] INFO Repository: ome/omero-metadata 2025-08-23 00:42:32,518 [ scc.merge] INFO Updating 3cd120c..55060a2 2025-08-23 00:42:32,518 [ scc.merge] INFO Previously merged: 2025-08-23 00:42:32,518 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-23 00:42:32,518 [ scc.merge] INFO 2025-08-23 00:42:32,518 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-23 00:42:32,518 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-08-23 00:42:32,518 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-08-23 00:42:32,518 [ scc.merge] INFO 2025-08-23 00:42:32,518 [ scc.merge] INFO Repository: ome/omero-parade 2025-08-23 00:42:32,518 [ scc.merge] INFO Excluded PRs: 2025-08-23 00:42:32,518 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2025-08-23 00:42:32,518 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2025-08-23 00:42:32,518 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2025-08-23 00:42:32,518 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2025-08-23 00:42:32,518 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,518 [ scc.merge] INFO 2025-08-23 00:42:32,518 [ scc.merge] INFO Merged PRs: 2025-08-23 00:42:32,518 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-08-23 00:42:32,518 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-08-23 00:42:32,518 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-08-23 00:42:32,518 [ scc.merge] INFO 2025-08-23 00:42:32,518 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2025-08-23 00:42:32,518 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,518 [ scc.merge] INFO 2025-08-23 00:42:32,518 [ scc.merge] INFO 2025-08-23 00:42:32,518 [ scc.merge] INFO Repository: ome/omero-rois 2025-08-23 00:42:32,518 [ scc.merge] INFO Excluded PRs: 2025-08-23 00:42:32,518 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-08-23 00:42:32,518 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,518 [ scc.merge] INFO 2025-08-23 00:42:32,518 [ scc.merge] INFO Merged PRs: 2025-08-23 00:42:32,518 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2025-08-23 00:42:32,518 [ scc.merge] INFO 2025-08-23 00:42:32,518 [ scc.merge] INFO Repository: ome/omero-signup 2025-08-23 00:42:32,518 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,518 [ scc.merge] INFO 2025-08-23 00:42:32,518 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-23 00:42:32,518 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2025-08-23 00:42:32,518 [ scc.merge] INFO 2025-08-23 00:42:32,518 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2025-08-23 00:42:32,519 [ scc.merge] INFO Excluded PRs: 2025-08-23 00:42:32,519 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2025-08-23 00:42:32,519 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2025-08-23 00:42:32,519 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2025-08-23 00:42:32,519 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,519 [ scc.merge] INFO 2025-08-23 00:42:32,519 [ scc.merge] INFO Merged PRs: 2025-08-23 00:42:32,519 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-08-23 00:42:32,519 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps' 2025-08-23 00:42:32,519 [ scc.merge] INFO 2025-08-23 00:42:32,519 [ scc.merge] INFO Repository: ome/omero-upload 2025-08-23 00:42:32,519 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,519 [ scc.merge] INFO 2025-08-23 00:42:32,519 [ scc.merge] INFO 2025-08-23 00:42:32,519 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2025-08-23 00:42:32,519 [ scc.merge] INFO Updating deab817..160d894 2025-08-23 00:42:32,519 [ scc.merge] INFO Previously merged: 2025-08-23 00:42:32,519 [ scc.merge] INFO - PR 20 jburel 'Build' 2025-08-23 00:42:32,519 [ scc.merge] INFO 2025-08-23 00:42:32,519 [ scc.merge] INFO 2025-08-23 00:42:32,519 [ scc.merge] INFO Repository: ome/omero-web-zarr 2025-08-23 00:42:32,519 [ scc.merge] INFO Excluded PRs: 2025-08-23 00:42:32,519 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure) 2025-08-23 00:42:32,519 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2025-08-23 00:42:32,519 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,519 [ scc.merge] INFO 2025-08-23 00:42:32,519 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-23 00:42:32,519 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-08-23 00:42:32,519 [ scc.merge] INFO 2025-08-23 00:42:32,519 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2025-08-23 00:42:32,519 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,519 [ scc.merge] INFO 2025-08-23 00:42:32,519 [ scc.merge] INFO 2025-08-23 00:42:32,519 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2025-08-23 00:42:32,519 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,519 [ scc.merge] INFO 2025-08-23 00:42:32,519 [ scc.merge] INFO 2025-08-23 00:42:32,519 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2025-08-23 00:42:32,519 [ scc.merge] INFO Already up to date. 2025-08-23 00:42:32,519 [ scc.merge] INFO 2025-08-23 00:42:32,519 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-23 00:42:32,519 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2025-08-23 00:42:32,520 [ scc.merge] INFO 2025-08-23 00:42:32,520 [ scc.merge] INFO Repository: ome/scripts 2025-08-23 00:42:32,520 [ scc.merge] INFO Excluded PRs: 2025-08-23 00:42:32,520 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-08-23 00:42:32,520 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-08-23 00:42:32,520 [ scc.merge] INFO Updating 4b4c755..573db34 2025-08-23 00:42:32,520 [ scc.merge] INFO Previously merged: 2025-08-23 00:42:32,520 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2025-08-23 00:42:32,520 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2025-08-23 00:42:32,520 [ scc.merge] INFO 2025-08-23 00:42:32,520 [ scc.merge] INFO Merged PRs: 2025-08-23 00:42:32,520 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-23 00:42:32,520 [ scc.merge] INFO 2025-08-23 00:42:32,520 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-23 00:42:32,520 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-23 00:42:32,520 [ scc.merge] INFO 2025-08-23 00:42:32,520 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-23 00:42:32,520 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-08-23 00:42:32,522 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-08-23 00:42:32,524 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-08-23 00:42:32,527 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-08-23 00:42:32,529 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-08-23 00:42:32,531 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-08-23 00:42:32,534 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-08-23 00:42:32,536 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-08-23 00:42:32,538 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-08-23 00:42:32,541 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-08-23 00:42:32,543 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-08-23 00:42:32,545 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-08-23 00:42:32,548 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,550 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,550 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-08-23 00:42:32,550 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-08-23 00:42:32,552 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-08-23 00:42:32,555 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,557 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,557 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-08-23 00:42:32,557 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,559 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,559 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-08-23 00:42:32,559 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,561 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,561 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-08-23 00:42:32,562 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-08-23 00:42:32,564 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-08-23 00:42:32,566 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,568 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-08-23 00:42:32,569 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-08-23 00:42:32,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-08-23 00:42:32,571 [ scc.git] DEBUG Calling 'git remote' 2025-08-23 00:42:32,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 0525697] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD ac4055e] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-08-23 00:43:22,118 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-08-23 00:43:32,207 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-08-23 00:43:34,916 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-08-23 00:43:40,227 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-08-23 00:44:21,519 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS