Started by upstream project "Trigger" build number 84
originally caused by:
Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-plugins-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.47.3'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.47.3'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
Commit message: "Merge pull request #18 from jburel/python_311"
> git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master)
Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378"
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-plugins.git
> git --version # timeout=10
> git --version # 'git version 2.47.3'
> git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
> git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
Cleaning workspace
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
> git submodule foreach --recursive git reset --hard # timeout=10
> git submodule foreach --recursive git clean -fdx # timeout=10
> git remote # timeout=10
> git submodule init # timeout=10
> git submodule sync # timeout=10
> git config --get remote.origin.url # timeout=10
> git submodule init # timeout=10
> git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
> git config --get submodule.omero-figure.url # timeout=10
> git config -f .gitmodules --get submodule.omero-figure.path # timeout=10
> git config --get submodule.minimal-omero-client.url # timeout=10
> git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10
> git config --get submodule.scripts.url # timeout=10
> git config -f .gitmodules --get submodule.scripts.path # timeout=10
> git config --get submodule.omero-test-infra.url # timeout=10
> git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10
> git config --get submodule.omero-prometheus-tools.url # timeout=10
> git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10
> git config --get submodule.omero-parade.url # timeout=10
> git config -f .gitmodules --get submodule.omero-parade.path # timeout=10
> git config --get submodule.omero-mapr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10
> git config --get submodule.omero-fpbioimage.url # timeout=10
> git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10
> git config --get submodule.omero-iviewer.url # timeout=10
> git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10
> git config --get submodule.omero-gallery.url # timeout=10
> git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10
> git config --get submodule.rOMERO-gateway.url # timeout=10
> git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10
> git config --get submodule.omero-weberror.url # timeout=10
> git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10
> git config --get submodule.omero-cli-render.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10
> git config --get submodule.omero-cli-duplicate.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10
> git config --get submodule.omero-metadata.url # timeout=10
> git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10
> git config --get submodule.omero-webtest.url # timeout=10
> git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10
> git config --get submodule.omero-upload.url # timeout=10
> git config -f .gitmodules --get submodule.omero-upload.path # timeout=10
> git config --get submodule.omero-virtual-microscope.url # timeout=10
> git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10
> git config --get submodule.omero-rois.url # timeout=10
> git config -f .gitmodules --get submodule.omero-rois.path # timeout=10
> git config --get submodule.omero-signup.url # timeout=10
> git config -f .gitmodules --get submodule.omero-signup.path # timeout=10
> git config --get submodule.omero-web-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10
> git config --get submodule.omero-cli-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10
> git submodule update --init --recursive omero-figure # timeout=10
> git submodule update --init --recursive minimal-omero-client # timeout=10
> git submodule update --init --recursive scripts # timeout=10
> git submodule update --init --recursive omero-test-infra # timeout=10
> git submodule update --init --recursive omero-prometheus-tools # timeout=10
> git submodule update --init --recursive omero-parade # timeout=10
> git submodule update --init --recursive omero-mapr # timeout=10
> git submodule update --init --recursive omero-fpbioimage # timeout=10
> git submodule update --init --recursive omero-iviewer # timeout=10
> git submodule update --init --recursive omero-gallery # timeout=10
> git submodule update --init --recursive rOMERO-gateway # timeout=10
> git submodule update --init --recursive omero-weberror # timeout=10
> git submodule update --init --recursive omero-cli-render # timeout=10
> git submodule update --init --recursive omero-cli-duplicate # timeout=10
> git submodule update --init --recursive omero-metadata # timeout=10
> git submodule update --init --recursive omero-webtest # timeout=10
> git submodule update --init --recursive omero-upload # timeout=10
> git submodule update --init --recursive omero-virtual-microscope # timeout=10
> git submodule update --init --recursive omero-rois # timeout=10
> git submodule update --init --recursive omero-signup # timeout=10
> git submodule update --init --recursive omero-web-zarr # timeout=10
> git submodule update --init --recursive omero-cli-zarr # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 60
[Pipeline] sh
+ pushd build
~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-plugins-push
+ python3.11 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ python3.11 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1)
Collecting pip
Using cached pip-26.0.1-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 22.3.1
Uninstalling pip-22.3.1:
Successfully uninstalled pip-22.3.1
Successfully installed pip-26.0.1
+ python3.11 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached pyjwt-2.11.0-py3-none-any.whl.metadata (4.0 kB)
Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-46.0.5-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB)
Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB)
Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB)
Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2026.1.4-py3-none-any.whl.metadata (2.5 kB)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached pygithub-2.8.1-py3-none-any.whl (432 kB)
Using cached pyjwt-2.11.0-py3-none-any.whl (28 kB)
Using cached cryptography-46.0.5-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB)
Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB)
Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB)
Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
Using cached requests-2.32.5-py3-none-any.whl (64 kB)
Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB)
Using cached idna-3.11-py3-none-any.whl (71 kB)
Using cached certifi-2026.1.4-py3-none-any.whl (152 kB)
Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached pycparser-3.0-py3-none-any.whl (48 kB)
Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc
Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2026.1.4 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.5 future-1.0.0 idna-3.11 pycparser-3.0 pyjwt-2.11.0 pynacl-1.6.2 requests-2.32.5 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-plugins.git
+ BASE_REPO=omero-plugins.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-02-22 00:37:10,418 [ scc.config] DEBUG Found github.token
2026-02-22 00:37:10,419 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-02-22 00:37:10,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:37:11,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:37:11,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-02-22 00:37:11,398 [ scc.gh] DEBUG 3997 remaining from 5000 (Reset at 01:02
2026-02-22 00:37:11,398 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:37:11,401 [ scc.git] DEBUG Check current status
2026-02-22 00:37:11,401 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:11,403 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2026-02-22 00:37:11,404 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:11,450 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master)
2026-02-22 00:37:11,453 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2026-02-22 00:37:11,456 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2026-02-22 00:37:11,459 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2026-02-22 00:37:11,462 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2026-02-22 00:37:11,465 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2026-02-22 00:37:11,468 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2026-02-22 00:37:11,471 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2026-02-22 00:37:11,474 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2026-02-22 00:37:11,477 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2026-02-22 00:37:11,479 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2026-02-22 00:37:11,482 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2026-02-22 00:37:11,485 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2026-02-22 00:37:11,488 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2026-02-22 00:37:11,491 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2026-02-22 00:37:11,494 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2026-02-22 00:37:11,496 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2026-02-22 00:37:11,499 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2026-02-22 00:37:11,502 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2026-02-22 00:37:11,505 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2026-02-22 00:37:11,508 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2026-02-22 00:37:11,511 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2026-02-22 00:37:11,514 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:37:11,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2026-02-22 00:37:12,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:37:12,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:37:13,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:37:13,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:37:13,635 [ scc.git] DEBUG Resetting...
2026-02-22 00:37:13,635 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-02-22 00:37:13,642 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2026-02-22 00:37:13,643 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-02-22 00:37:13,746 [ scc.git] DEBUG Check current status
2026-02-22 00:37:13,746 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:13,749 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2026-02-22 00:37:13,749 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:13,795 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master)
2026-02-22 00:37:13,798 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2026-02-22 00:37:13,801 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2026-02-22 00:37:13,804 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2026-02-22 00:37:13,807 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2026-02-22 00:37:13,810 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2026-02-22 00:37:13,813 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2026-02-22 00:37:13,815 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2026-02-22 00:37:13,818 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2026-02-22 00:37:13,821 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2026-02-22 00:37:13,823 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2026-02-22 00:37:13,826 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2026-02-22 00:37:13,829 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2026-02-22 00:37:13,832 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2026-02-22 00:37:13,835 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2026-02-22 00:37:13,837 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2026-02-22 00:37:13,840 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2026-02-22 00:37:13,842 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2026-02-22 00:37:13,845 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2026-02-22 00:37:13,847 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2026-02-22 00:37:13,850 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2026-02-22 00:37:13,854 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2026-02-22 00:37:13,855 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-02-22 00:37:13,855 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-02-22 00:37:13,855 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-02-22 00:37:13,855 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-02-22 00:37:13,855 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-02-22 00:37:13,855 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:37:14,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2026-02-22 00:37:14,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2026-02-22 00:37:14,951 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:37:14,951 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2026-02-22 00:37:15,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2026-02-22 00:37:15,453 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:37:15,453 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2026-02-22 00:37:15,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2026-02-22 00:37:15,981 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:37:15,981 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2026-02-22 00:37:15,981 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:37:15,981 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:37:15,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:37:15,984 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:37:15,986 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:37:15,986 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:37:15,989 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:37:15,991 [ scc.git] DEBUG Already up to date.
2026-02-22 00:37:15,992 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2026-02-22 00:37:16,260 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2026-02-22 00:37:16,260 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2026-02-22 00:37:16,264 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2026-02-22 00:37:16,651 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2026-02-22 00:37:16,651 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2026-02-22 00:37:16,656 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2026-02-22 00:37:16,907 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2026-02-22 00:37:16,907 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2026-02-22 00:37:16,911 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:37:16,911 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:37:16,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:37:16,914 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2026-02-22 00:37:16,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:37:16,918 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2026-02-22 00:37:16,932 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:37:16,935 [ scc.git] DEBUG scripts | 2 +-
2026-02-22 00:37:16,935 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-02-22 00:37:17,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:37:17,080 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2026-02-22 00:37:17,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:37:17,084 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2026-02-22 00:37:17,098 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:37:17,101 [ scc.git] DEBUG omero-figure | 2 +-
2026-02-22 00:37:17,101 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-02-22 00:37:17,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:37:17,629 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2026-02-22 00:37:17,633 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:37:17,635 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2026-02-22 00:37:17,651 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:37:17,654 [ scc.git] DEBUG omero-iviewer | 2 +-
2026-02-22 00:37:17,654 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-02-22 00:37:18,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:37:18,024 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:37:18,087 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2026-02-22 00:37:18,112 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2026-02-22 00:37:18,126 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2026-02-22 00:37:18,127 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:37:18,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:37:18,129 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:37:18,208 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfe469f450> has no local changes
2026-02-22 00:37:18,208 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:37:18,279 [ scc.git] DEBUG [detached HEAD 45e7da1] merge master -Dorg -Snone
2026-02-22 00:37:18,279 [ scc.merge] INFO Repository: ome/omero-plugins
2026-02-22 00:37:18,279 [ scc.merge] INFO Already up to date.
2026-02-22 00:37:18,279 [ scc.merge] INFO
2026-02-22 00:37:18,279 [ scc.merge] INFO Merged PRs:
2026-02-22 00:37:18,279 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2026-02-22 00:37:18,279 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2026-02-22 00:37:18,279 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2026-02-22 00:37:18,279 [ scc.merge] INFO
2026-02-22 00:37:18,279 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-02-22 00:37:18,279 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'minimal-omero-client'
Synchronizing submodule url for 'omero-cli-duplicate'
Synchronizing submodule url for 'omero-cli-render'
Synchronizing submodule url for 'omero-cli-zarr'
Synchronizing submodule url for 'omero-figure'
Synchronizing submodule url for 'omero-fpbioimage'
Synchronizing submodule url for 'omero-gallery'
Synchronizing submodule url for 'omero-iviewer'
Synchronizing submodule url for 'omero-mapr'
Synchronizing submodule url for 'omero-metadata'
Synchronizing submodule url for 'omero-parade'
Synchronizing submodule url for 'omero-prometheus-tools'
Synchronizing submodule url for 'omero-rois'
Synchronizing submodule url for 'omero-signup'
Synchronizing submodule url for 'omero-test-infra'
Synchronizing submodule url for 'omero-upload'
Synchronizing submodule url for 'omero-virtual-microscope'
Synchronizing submodule url for 'omero-web-zarr'
Synchronizing submodule url for 'omero-weberror'
Synchronizing submodule url for 'omero-webtest'
Synchronizing submodule url for 'rOMERO-gateway'
Synchronizing submodule url for 'scripts'
Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8'
Submodule path 'omero-cli-zarr': checked out '9530c10ba9823fcba6b39139987bf4bcd4a60179'
Submodule path 'omero-figure': checked out 'e241dc01b21d8800b6e34e087cbf7099046f68e6'
Submodule path 'omero-iviewer': checked out '5e2de43ad401fb00690a79644056e0ac15fabfd5'
Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501'
Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77'
Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f'
Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368'
Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0'
Merge all submodules using repository configuration:
base-branch: master
submodules:
scripts:
base-branch: develop
omero-web-zarr:
base-branch: main
2026-02-22 00:37:25,967 [ scc.config] DEBUG Found github.token
2026-02-22 00:37:25,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-02-22 00:37:26,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:37:26,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:37:26,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-02-22 00:37:26,948 [ scc.gh] DEBUG 3983 remaining from 5000 (Reset at 01:02
2026-02-22 00:37:26,948 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:37:26,951 [ scc.git] DEBUG Check current status
2026-02-22 00:37:26,951 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:26,953 [ scc.git] DEBUG 45e7da1 merge master -Dorg -Snone
2026-02-22 00:37:26,953 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:27,001 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master)
2026-02-22 00:37:27,004 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2026-02-22 00:37:27,007 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303)
2026-02-22 00:37:27,010 [ scc.git] DEBUG +9530c10ba9823fcba6b39139987bf4bcd4a60179 omero-cli-zarr (v0.7.0rc1-16-g9530c10)
2026-02-22 00:37:27,020 [ scc.git] DEBUG +e241dc01b21d8800b6e34e087cbf7099046f68e6 omero-figure (v7.3.1-36-ge241dc01)
2026-02-22 00:37:27,022 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2026-02-22 00:37:27,026 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2026-02-22 00:37:27,029 [ scc.git] DEBUG +5e2de43ad401fb00690a79644056e0ac15fabfd5 omero-iviewer (v0.16.0-20-g5e2de43)
2026-02-22 00:37:27,032 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2026-02-22 00:37:27,035 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2)
2026-02-22 00:37:27,037 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2026-02-22 00:37:27,040 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2026-02-22 00:37:27,043 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2026-02-22 00:37:27,046 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2026-02-22 00:37:27,049 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015)
2026-02-22 00:37:27,052 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2026-02-22 00:37:27,055 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894)
2026-02-22 00:37:27,058 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685)
2026-02-22 00:37:27,060 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2026-02-22 00:37:27,063 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2026-02-22 00:37:27,066 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2026-02-22 00:37:27,069 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768)
2026-02-22 00:37:27,072 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:37:27,072 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2026-02-22 00:37:27,073 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-web-zarr:
base-branch: main
scripts:
base-branch: develop
2026-02-22 00:37:27,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2026-02-22 00:37:27,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:37:28,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:37:28,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:37:29,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:37:29,205 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:37:29,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2026-02-22 00:37:29,277 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:37:29,279 [ scc.git] DEBUG Check current status
2026-02-22 00:37:29,279 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:29,281 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0
2026-02-22 00:37:29,281 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:29,320 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:37:29,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None
2026-02-22 00:37:30,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:37:30,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:37:31,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:37:31,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:37:31,491 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:37:31,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:37:31,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2026-02-22 00:37:31,530 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:37:31,532 [ scc.git] DEBUG Check current status
2026-02-22 00:37:31,533 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:31,535 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build
2026-02-22 00:37:31,535 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:31,573 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:37:32,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None
2026-02-22 00:37:32,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:37:33,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:37:33,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:37:33,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:37:33,876 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:37:33,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:37:33,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2026-02-22 00:37:33,917 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:37:33,920 [ scc.git] DEBUG Check current status
2026-02-22 00:37:33,920 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:33,922 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease
2026-02-22 00:37:33,923 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:33,963 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:37:34,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None
2026-02-22 00:37:34,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:37:35,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:37:35,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:37:36,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:37:36,075 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:37:36,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:37:36,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2026-02-22 00:37:36,115 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:37:36,117 [ scc.git] DEBUG Check current status
2026-02-22 00:37:36,117 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:36,120 [ scc.git] DEBUG 9530c10 Merge pull request #192 from jburel/pixels_size
2026-02-22 00:37:36,120 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:36,159 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:37:36,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None
2026-02-22 00:37:37,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:37:37,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:37:37,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:37:38,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:37:38,305 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:37:38,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:37:38,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2026-02-22 00:37:38,344 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:37:38,346 [ scc.git] DEBUG Check current status
2026-02-22 00:37:38,346 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:38,349 [ scc.git] DEBUG e241dc01 Merge pull request #648 from kaabl/PR543-resurrect
2026-02-22 00:37:38,349 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:38,387 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:37:38,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None
2026-02-22 00:37:39,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:37:39,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:37:40,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:37:40,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:37:40,585 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:37:40,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:37:40,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2026-02-22 00:37:40,625 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:37:40,627 [ scc.git] DEBUG Check current status
2026-02-22 00:37:40,627 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:40,629 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build
2026-02-22 00:37:40,629 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:40,668 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:37:41,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None
2026-02-22 00:37:41,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:37:41,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:37:42,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:37:42,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:37:42,825 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:37:42,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:37:42,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2026-02-22 00:37:42,864 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:37:42,866 [ scc.git] DEBUG Check current status
2026-02-22 00:37:42,866 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:42,868 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build
2026-02-22 00:37:42,869 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:42,908 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:37:43,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None
2026-02-22 00:37:43,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:37:44,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:37:44,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:37:45,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:37:45,073 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:37:45,112 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:37:45,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2026-02-22 00:37:45,113 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:37:45,115 [ scc.git] DEBUG Check current status
2026-02-22 00:37:45,115 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:45,117 [ scc.git] DEBUG 5e2de43 Merge pull request #510 from joshmoore/issue-509
2026-02-22 00:37:45,117 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:45,155 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:37:45,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None
2026-02-22 00:37:46,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:37:46,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:37:46,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:37:47,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:37:47,393 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:37:47,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:37:47,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2026-02-22 00:37:47,433 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:37:47,435 [ scc.git] DEBUG Check current status
2026-02-22 00:37:47,435 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:47,437 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0
2026-02-22 00:37:47,438 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:47,478 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:37:47,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None
2026-02-22 00:37:48,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:37:48,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:37:49,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:37:49,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:37:49,618 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:37:49,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:37:49,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2026-02-22 00:37:49,658 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:37:49,661 [ scc.git] DEBUG Check current status
2026-02-22 00:37:49,661 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:49,663 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2026-02-22 00:37:49,663 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:49,703 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:37:50,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None
2026-02-22 00:37:50,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:37:50,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:37:51,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:37:51,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:37:51,986 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:37:52,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:37:52,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2026-02-22 00:37:52,026 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:37:52,028 [ scc.git] DEBUG Check current status
2026-02-22 00:37:52,028 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:52,031 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build
2026-02-22 00:37:52,031 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:52,071 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:37:52,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None
2026-02-22 00:37:52,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:37:53,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:37:53,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:37:54,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:37:54,188 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:37:54,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:37:54,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2026-02-22 00:37:54,229 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:37:54,231 [ scc.git] DEBUG Check current status
2026-02-22 00:37:54,231 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:54,233 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build
2026-02-22 00:37:54,233 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:54,273 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:37:54,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None
2026-02-22 00:37:55,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:37:55,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:37:55,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:37:56,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:37:56,372 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:37:56,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:37:56,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2026-02-22 00:37:56,413 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:37:56,415 [ scc.git] DEBUG Check current status
2026-02-22 00:37:56,415 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:56,418 [ scc.git] DEBUG bdfeb5e bump sphinx version
2026-02-22 00:37:56,418 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:56,458 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:37:56,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None
2026-02-22 00:37:57,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:37:57,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:37:58,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:37:58,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:37:58,799 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:37:58,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:37:58,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2026-02-22 00:37:58,840 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:37:58,842 [ scc.git] DEBUG Check current status
2026-02-22 00:37:58,842 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:37:58,844 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build
2026-02-22 00:37:58,844 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:37:58,884 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:37:59,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None
2026-02-22 00:37:59,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:38:00,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:38:00,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:38:01,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:38:01,002 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:38:01,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:38:01,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2026-02-22 00:38:01,041 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:38:01,043 [ scc.git] DEBUG Check current status
2026-02-22 00:38:01,043 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:38:01,045 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme
2026-02-22 00:38:01,046 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:38:01,084 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:38:01,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2026-02-22 00:38:01,428 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2026-02-22 00:38:01,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None
2026-02-22 00:38:02,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:38:02,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:38:03,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:38:03,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:38:03,447 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:38:03,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:38:03,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2026-02-22 00:38:03,488 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:38:03,490 [ scc.git] DEBUG Check current status
2026-02-22 00:38:03,491 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:38:03,493 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build
2026-02-22 00:38:03,493 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:38:03,531 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:38:04,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None
2026-02-22 00:38:04,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:38:05,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:38:05,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:38:05,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:38:05,910 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:38:05,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:38:05,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2026-02-22 00:38:05,951 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:38:05,953 [ scc.git] DEBUG Check current status
2026-02-22 00:38:05,953 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:38:05,955 [ scc.git] DEBUG 160d894 Fix display of code
2026-02-22 00:38:05,955 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:38:05,996 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:38:06,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None
2026-02-22 00:38:06,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:38:07,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:38:07,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:38:08,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:38:08,179 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:38:08,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:38:08,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2026-02-22 00:38:08,224 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:38:08,226 [ scc.git] DEBUG Check current status
2026-02-22 00:38:08,226 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:38:08,229 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1
2026-02-22 00:38:08,229 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:38:08,270 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:38:08,271 [ scc.git] DEBUG Repository configuration:
base-branch: main
2026-02-22 00:38:08,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None
2026-02-22 00:38:09,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:38:09,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:38:10,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:38:10,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:38:10,465 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:38:10,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:38:10,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2026-02-22 00:38:10,506 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:38:10,508 [ scc.git] DEBUG Check current status
2026-02-22 00:38:10,508 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:38:10,510 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build
2026-02-22 00:38:10,511 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:38:10,550 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:38:10,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2026-02-22 00:38:10,886 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2026-02-22 00:38:11,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None
2026-02-22 00:38:11,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:38:12,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:38:12,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:38:12,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:38:12,897 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:38:12,935 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:38:12,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2026-02-22 00:38:12,936 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:38:12,938 [ scc.git] DEBUG Check current status
2026-02-22 00:38:12,938 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:38:12,940 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build
2026-02-22 00:38:12,940 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:38:12,980 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:38:13,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2026-02-22 00:38:13,310 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2026-02-22 00:38:13,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None
2026-02-22 00:38:14,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:38:14,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:38:14,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:38:15,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:38:15,268 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:38:15,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:38:15,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2026-02-22 00:38:15,307 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:38:15,310 [ scc.git] DEBUG Check current status
2026-02-22 00:38:15,310 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:38:15,312 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2026-02-22 00:38:15,312 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:38:15,352 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:38:15,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None
2026-02-22 00:38:16,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:38:16,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:38:17,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:38:17,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:38:17,645 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:38:17,684 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:38:17,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2026-02-22 00:38:17,685 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-02-22 00:38:17,687 [ scc.git] DEBUG Check current status
2026-02-22 00:38:17,687 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:38:17,689 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0
2026-02-22 00:38:17,690 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:38:17,729 [ scc.config] DEBUG Found remote.origin.url
2026-02-22 00:38:17,730 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2026-02-22 00:38:18,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2026-02-22 00:38:18,067 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2026-02-22 00:38:18,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None
2026-02-22 00:38:18,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-02-22 00:38:19,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-02-22 00:38:19,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-02-22 00:38:20,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-02-22 00:38:20,012 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:38:20,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:38:20,051 [ scc.git] DEBUG Resetting...
2026-02-22 00:38:20,051 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-02-22 00:38:20,058 [ scc.git] DEBUG HEAD is now at 45e7da1 merge master -Dorg -Snone
2026-02-22 00:38:20,058 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-02-22 00:38:20,111 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264'
2026-02-22 00:38:20,127 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62'
2026-02-22 00:38:20,159 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2026-02-22 00:38:20,177 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2026-02-22 00:38:20,192 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997'
2026-02-22 00:38:20,214 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73'
2026-02-22 00:38:20,227 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743'
2026-02-22 00:38:20,238 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2026-02-22 00:38:20,262 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2026-02-22 00:38:20,265 [ scc.git] DEBUG Check current status
2026-02-22 00:38:20,265 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-02-22 00:38:20,267 [ scc.git] DEBUG 45e7da1 merge master -Dorg -Snone
2026-02-22 00:38:20,267 [ scc.git] DEBUG Calling 'git submodule status'
2026-02-22 00:38:20,309 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master)
2026-02-22 00:38:20,312 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2026-02-22 00:38:20,315 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2026-02-22 00:38:20,318 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2026-02-22 00:38:20,321 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde)
2026-02-22 00:38:20,324 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2026-02-22 00:38:20,326 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2026-02-22 00:38:20,329 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce)
2026-02-22 00:38:20,332 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2026-02-22 00:38:20,335 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2026-02-22 00:38:20,338 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2026-02-22 00:38:20,340 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2026-02-22 00:38:20,343 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2026-02-22 00:38:20,346 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2026-02-22 00:38:20,349 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2026-02-22 00:38:20,352 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2026-02-22 00:38:20,354 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2026-02-22 00:38:20,357 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2026-02-22 00:38:20,359 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2026-02-22 00:38:20,362 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2026-02-22 00:38:20,364 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2026-02-22 00:38:20,368 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755)
2026-02-22 00:38:20,368 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-02-22 00:38:20,368 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-02-22 00:38:20,368 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-02-22 00:38:20,368 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-02-22 00:38:20,369 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-02-22 00:38:20,369 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-02-22 00:38:20,369 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:38:20,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2026-02-22 00:38:21,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2026-02-22 00:38:21,146 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:38:21,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2026-02-22 00:38:22,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:38:22,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2026-02-22 00:38:23,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:38:23,072 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2026-02-22 00:38:23,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2026-02-22 00:38:23,582 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:38:24,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2026-02-22 00:38:24,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:38:25,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2026-02-22 00:38:25,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:38:25,531 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2026-02-22 00:38:26,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2026-02-22 00:38:26,016 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:38:26,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2026-02-22 00:38:27,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:38:27,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2026-02-22 00:38:27,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:38:27,997 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2026-02-22 00:38:27,997 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:38:27,997 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:38:27,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:28,000 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:38:28,002 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:38:28,002 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:38:28,004 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:38:28,007 [ scc.git] DEBUG Already up to date.
2026-02-22 00:38:28,008 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2026-02-22 00:38:28,312 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2026-02-22 00:38:28,313 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2026-02-22 00:38:28,317 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2026-02-22 00:38:28,650 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2026-02-22 00:38:28,650 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2026-02-22 00:38:28,654 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2026-02-22 00:38:28,906 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2026-02-22 00:38:28,906 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2026-02-22 00:38:28,910 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:38:28,911 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:38:28,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:28,913 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2026-02-22 00:38:28,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:28,917 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2026-02-22 00:38:28,920 [ scc.git] DEBUG Already up to date.
2026-02-22 00:38:29,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:38:29,066 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2026-02-22 00:38:29,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:29,071 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2026-02-22 00:38:29,073 [ scc.git] DEBUG Already up to date.
2026-02-22 00:38:29,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:38:29,479 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2026-02-22 00:38:29,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:29,484 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2026-02-22 00:38:29,486 [ scc.git] DEBUG Already up to date.
2026-02-22 00:38:29,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:38:29,958 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:38:30,009 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:38:30,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:30,012 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:38:30,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2
2026-02-22 00:38:30,381 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:38:30,382 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2026-02-22 00:38:30,382 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:38:30,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:30,384 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:38:30,386 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:38:30,386 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:38:30,389 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:38:30,392 [ scc.git] DEBUG Already up to date.
2026-02-22 00:38:30,392 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:38:30,392 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:38:30,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:30,394 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:38:30,432 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:38:30,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:30,434 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:38:30,470 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:38:30,473 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8bea72ff10> has no local changes
2026-02-22 00:38:30,473 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/minimal-omero-client
Already up to date.
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:38:30,479 [ scc.git] DEBUG [detached HEAD 4fe9c25] merge master -Dorg -Ssuccess-only
2026-02-22 00:38:30,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:38:30,479 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:38:30,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None
2026-02-22 00:38:31,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None
2026-02-22 00:38:31,512 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:38:32,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None
2026-02-22 00:38:32,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:38:33,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:38:33,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None
2026-02-22 00:38:34,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:38:34,056 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:38:34,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None
2026-02-22 00:38:35,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None
2026-02-22 00:38:35,103 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:38:35,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2026-02-22 00:38:35,104 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:38:35,104 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:35,106 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:38:35,108 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:38:35,108 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:38:35,111 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:38:35,114 [ scc.git] DEBUG Already up to date.
2026-02-22 00:38:35,114 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head'
2026-02-22 00:38:35,383 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate
2026-02-22 00:38:35,383 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD
2026-02-22 00:38:35,387 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:38:35,387 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:38:35,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:35,389 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4'
2026-02-22 00:38:35,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:35,395 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4'
2026-02-22 00:38:35,401 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:38:35,404 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-02-22 00:38:35,404 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-02-22 00:38:35,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:38:35,563 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:38:35,601 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:38:35,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:35,603 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:38:35,640 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:38:35,643 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8bea72ad10> has no local changes
2026-02-22 00:38:35,643 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:38:35,649 [ scc.git] DEBUG [detached HEAD 5b193c8] merge master -Dorg -Ssuccess-only
2026-02-22 00:38:35,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:38:35,649 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:38:36,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None
2026-02-22 00:38:36,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None
2026-02-22 00:38:37,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None
2026-02-22 00:38:37,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None
2026-02-22 00:38:38,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:38:38,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:38:39,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None
2026-02-22 00:38:39,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:38:39,504 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate'
2026-02-22 00:38:40,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None
2026-02-22 00:38:40,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None
2026-02-22 00:38:40,456 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:38:40,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2026-02-22 00:38:40,456 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:38:40,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:40,459 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:38:40,461 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:38:40,461 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:38:40,464 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:38:40,471 [ scc.git] DEBUG Updating ce6e13c..68b7303
2026-02-22 00:38:41,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None
2026-02-22 00:38:41,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None
2026-02-22 00:38:42,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None
2026-02-22 00:38:43,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None
2026-02-22 00:38:43,104 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head'
2026-02-22 00:38:43,551 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2026-02-22 00:38:43,551 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD
2026-02-22 00:38:43,555 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:38:43,556 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:38:43,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:43,558 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99'
2026-02-22 00:38:43,561 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:43,563 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99'
2026-02-22 00:38:43,571 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2026-02-22 00:38:43,572 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:38:43,575 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++--------------------
2026-02-22 00:38:43,575 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-)
2026-02-22 00:38:43,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:38:43,725 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:38:43,763 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:38:43,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:38:43,765 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:38:43,802 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:38:43,805 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8bed13ed90> has no local changes
2026-02-22 00:38:43,806 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-render
Excluded PRs:
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Updating ce6e13c..68b7303
Previously merged:
- PR 74 jburel 'Replace manual changelog by automated GH release step'
- PR 75 jburel 'Sort the new channels to ensure settings are set'
- PR 71 dominikl 'Escape slash character in image names'
- PR 69 dominikl 'Fix help text for impo/export commands'
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:38:43,811 [ scc.git] DEBUG [detached HEAD b8e72fd] merge master -Dorg -Ssuccess-only
2026-02-22 00:38:43,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:38:43,812 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:38:44,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None
2026-02-22 00:38:44,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None
2026-02-22 00:38:45,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None
2026-02-22 00:38:45,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None
2026-02-22 00:38:46,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:38:46,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:38:47,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None
2026-02-22 00:38:47,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None
2026-02-22 00:38:48,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None
2026-02-22 00:38:48,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None
2026-02-22 00:38:48,560 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"'
2026-02-22 00:38:49,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None
2026-02-22 00:38:49,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None
2026-02-22 00:38:49,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None
2026-02-22 00:38:50,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None
2026-02-22 00:38:50,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None
2026-02-22 00:38:51,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:38:51,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:38:52,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None
2026-02-22 00:38:52,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None
2026-02-22 00:38:53,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None
2026-02-22 00:38:53,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None
2026-02-22 00:38:53,709 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2026-02-22 00:38:54,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None
2026-02-22 00:38:54,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None
2026-02-22 00:38:55,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None
2026-02-22 00:38:55,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:38:56,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:38:56,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None
2026-02-22 00:38:57,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None
2026-02-22 00:38:57,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None
2026-02-22 00:38:57,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None
2026-02-22 00:38:57,927 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells'
2026-02-22 00:38:58,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None
2026-02-22 00:38:58,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None
2026-02-22 00:38:59,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/26693cecf3a9c915bc5f8e23d7a637769f1945a2 HTTP/1.1" 200 None
2026-02-22 00:38:59,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/26693cecf3a9c915bc5f8e23d7a637769f1945a2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:39:00,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/26693cecf3a9c915bc5f8e23d7a637769f1945a2/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:39:00,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/26693cecf3a9c915bc5f8e23d7a637769f1945a2 HTTP/1.1" 200 None
2026-02-22 00:39:01,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/26693cecf3a9c915bc5f8e23d7a637769f1945a2?per_page=1 HTTP/1.1" 200 None
2026-02-22 00:39:01,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/26693cecf3a9c915bc5f8e23d7a637769f1945a2 HTTP/1.1" 200 None
2026-02-22 00:39:02,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/26693cecf3a9c915bc5f8e23d7a637769f1945a2/status HTTP/1.1" 200 None
2026-02-22 00:39:02,130 [ scc.repo] DEBUG - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
2026-02-22 00:39:02,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None
2026-02-22 00:39:03,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None
2026-02-22 00:39:03,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None
2026-02-22 00:39:04,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None
2026-02-22 00:39:04,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None
2026-02-22 00:39:04,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None
2026-02-22 00:39:05,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None
2026-02-22 00:39:05,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None
2026-02-22 00:39:05,971 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:39:05,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2026-02-22 00:39:05,971 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:39:05,971 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:39:05,974 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:39:05,976 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:39:05,976 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:39:05,979 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:39:05,992 [ scc.git] DEBUG Updating 11d3587..9530c10
2026-02-22 00:39:06,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None
2026-02-22 00:39:07,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None
2026-02-22 00:39:08,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None
2026-02-22 00:39:08,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None
2026-02-22 00:39:09,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None
2026-02-22 00:39:10,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None
2026-02-22 00:39:10,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None
2026-02-22 00:39:11,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None
2026-02-22 00:39:12,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None
2026-02-22 00:39:12,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None
2026-02-22 00:39:13,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None
2026-02-22 00:39:13,746 [ scc.git] DEBUG Calling 'git fetch origin pull/172/head'
2026-02-22 00:39:14,185 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2026-02-22 00:39:14,185 [ scc.git] DEBUG * branch refs/pull/172/head -> FETCH_HEAD
2026-02-22 00:39:14,188 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head'
2026-02-22 00:39:14,651 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2026-02-22 00:39:14,651 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD
2026-02-22 00:39:14,655 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head'
2026-02-22 00:39:15,031 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2026-02-22 00:39:15,031 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD
2026-02-22 00:39:15,036 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head'
2026-02-22 00:39:15,285 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2026-02-22 00:39:15,285 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD
2026-02-22 00:39:15,289 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:39:15,289 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:39:15,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:39:15,292 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...26693cecf3a9c915bc5f8e23d7a637769f1945a2'
2026-02-22 00:39:15,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:39:15,297 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 26693cecf3a9c915bc5f8e23d7a637769f1945a2'
2026-02-22 00:39:15,307 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:39:15,311 [ scc.git] DEBUG .isort.cfg | 2 +-
2026-02-22 00:39:15,311 [ scc.git] DEBUG .pre-commit-config.yaml | 23 +------
2026-02-22 00:39:15,311 [ scc.git] DEBUG README.rst | 5 +-
2026-02-22 00:39:15,311 [ scc.git] DEBUG setup.py | 5 +-
2026-02-22 00:39:15,311 [ scc.git] DEBUG src/omero_zarr/__init__.py | 4 --
2026-02-22 00:39:15,311 [ scc.git] DEBUG src/omero_zarr/cli.py | 18 +++++-
2026-02-22 00:39:15,311 [ scc.git] DEBUG src/omero_zarr/masks.py | 35 +++++------
2026-02-22 00:39:15,311 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 104 ++++++++++++++++++++----------
2026-02-22 00:39:15,311 [ scc.git] DEBUG src/omero_zarr/util.py | 13 ++--
2026-02-22 00:39:15,312 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 61 +++++++-----------
2026-02-22 00:39:15,312 [ scc.git] DEBUG test/integration/clitest/test_export.py | 108 +++++++++++++++++++++++++++-----
2026-02-22 00:39:15,312 [ scc.git] DEBUG test/integration/clitest/test_import.py | 9 +++
2026-02-22 00:39:15,312 [ scc.git] DEBUG 12 files changed, 245 insertions(+), 142 deletions(-)
2026-02-22 00:39:15,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:39:15,472 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c'
2026-02-22 00:39:15,476 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:39:15,478 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c'
2026-02-22 00:39:15,492 [ scc.git] DEBUG Auto-merging README.rst
2026-02-22 00:39:15,492 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py
2026-02-22 00:39:15,492 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py
2026-02-22 00:39:15,492 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2026-02-22 00:39:15,492 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py
2026-02-22 00:39:15,492 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py
2026-02-22 00:39:15,492 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py
2026-02-22 00:39:15,492 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py
2026-02-22 00:39:15,492 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py
2026-02-22 00:39:15,492 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py
2026-02-22 00:39:15,492 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py
2026-02-22 00:39:15,492 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-02-22 00:39:15,492 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-02-22 00:39:15,495 [ scc.git] DEBUG Calling 'git reset --hard 6fb266e76ebdcde4da8d8f452a4f55dc9617b08d'
2026-02-22 00:39:15,499 [ scc.git] DEBUG HEAD is now at 6fb266e merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py)
2026-02-22 00:39:15,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:39:15,877 [ scc.git] DEBUG Calling 'git merge-base 9530c10ba9823fcba6b39139987bf4bcd4a60179 e795ce506487fad5c1184c909aaa1dab9a30401c'
2026-02-22 00:39:15,881 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9530c10ba9823fcba6b39139987bf4bcd4a60179'
2026-02-22 00:39:15,884 [ scc.git] INFO - PR 174 will-moore 'Skip wells'
Conflicting PR. Removed from build [OMERO-plugins-push#65](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/consoleText) for more details.
Possible conflicts:
- PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- src/omero_zarr/raw_pixels.py
- src/omero_zarr/cli.py
- test/integration/clitest/test_export.py
- src/omero_zarr/masks.py
- src/omero_zarr/util.py
--conflicts
2026-02-22 00:39:15,886 [ scc.config] DEBUG Found github.token
2026-02-22 00:39:15,886 [ scc.git] DEBUG Adding comment to issue #174.
2026-02-22 00:39:16,686 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 201 2186
2026-02-22 00:39:16,686 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae'
2026-02-22 00:39:16,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:39:16,693 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae'
2026-02-22 00:39:16,703 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2026-02-22 00:39:16,703 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py
2026-02-22 00:39:16,703 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py
2026-02-22 00:39:16,703 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py
2026-02-22 00:39:16,703 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-02-22 00:39:16,703 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-02-22 00:39:16,706 [ scc.git] DEBUG Calling 'git reset --hard 6fb266e76ebdcde4da8d8f452a4f55dc9617b08d'
2026-02-22 00:39:16,709 [ scc.git] DEBUG HEAD is now at 6fb266e merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py)
2026-02-22 00:39:17,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:39:17,073 [ scc.git] DEBUG Calling 'git merge-base 9530c10ba9823fcba6b39139987bf4bcd4a60179 f99a6a6869bf6259376adaea157f24955c9aa3ae'
2026-02-22 00:39:17,077 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9530c10ba9823fcba6b39139987bf4bcd4a60179'
2026-02-22 00:39:17,079 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Conflicting PR. Removed from build [OMERO-plugins-push#65](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/consoleText) for more details.
Possible conflicts:
- PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- test/integration/clitest/test_export.py
- src/omero_zarr/masks.py
- PR #174 will-moore 'Skip wells'
- test/integration/clitest/test_export.py
- src/omero_zarr/masks.py
--conflicts
2026-02-22 00:39:17,081 [ scc.config] DEBUG Found github.token
2026-02-22 00:39:17,081 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts.
2026-02-22 00:39:17,082 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac'
2026-02-22 00:39:17,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:39:17,087 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac'
2026-02-22 00:39:17,097 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py
2026-02-22 00:39:17,097 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py
2026-02-22 00:39:17,097 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py
2026-02-22 00:39:17,097 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py
2026-02-22 00:39:17,097 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py
2026-02-22 00:39:17,097 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-02-22 00:39:17,097 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-02-22 00:39:17,100 [ scc.git] DEBUG Calling 'git reset --hard 6fb266e76ebdcde4da8d8f452a4f55dc9617b08d'
2026-02-22 00:39:17,104 [ scc.git] DEBUG HEAD is now at 6fb266e merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py)
2026-02-22 00:39:17,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:39:17,469 [ scc.git] DEBUG Calling 'git merge-base 9530c10ba9823fcba6b39139987bf4bcd4a60179 cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac'
2026-02-22 00:39:17,471 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9530c10ba9823fcba6b39139987bf4bcd4a60179'
2026-02-22 00:39:17,474 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"'
Conflicting PR. Removed from build [OMERO-plugins-push#65](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/consoleText) for more details.
Possible conflicts:
- PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- test/integration/clitest/test_import.py
- src/omero_zarr/zarr_import.py
- Upstream changes
- test/integration/clitest/test_import.py
- src/omero_zarr/zarr_import.py
--conflicts
2026-02-22 00:39:17,476 [ scc.config] DEBUG Found github.token
2026-02-22 00:39:17,476 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts.
2026-02-22 00:39:17,476 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:39:17,514 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:39:17,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:39:17,516 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:39:17,552 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:39:17,555 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8bea6d7e90> has no local changes
2026-02-22 00:39:17,555 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 181 will-moore 'Add labels support for import' (exclude comment)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..9530c10
Previously merged:
- PR 192 jburel 'Set Omero pixel size'
- PR 186 jburel 'Create release from tag'
- PR 187 dominikl 'Fix target-by-name option'
- PR 180 will-moore 'Import command'
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
Conflicting PRs (not included):
- PR 174 will-moore 'Skip wells'
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
- PR 182 will-moore 'Revert "Remove support for Plate import"'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:39:17,561 [ scc.git] DEBUG [detached HEAD ac943d9] merge master -Dorg -Ssuccess-only
2026-02-22 00:39:17,562 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:39:17,562 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:39:18,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None
2026-02-22 00:39:18,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/667 HTTP/1.1" 200 None
2026-02-22 00:39:18,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/667/comments HTTP/1.1" 200 None
2026-02-22 00:39:19,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/317160c08a2bdc467f7867954ec7b633d4e8f5cd HTTP/1.1" 200 None
2026-02-22 00:39:20,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/317160c08a2bdc467f7867954ec7b633d4e8f5cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:39:20,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/317160c08a2bdc467f7867954ec7b633d4e8f5cd/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:39:21,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/317160c08a2bdc467f7867954ec7b633d4e8f5cd HTTP/1.1" 200 None
2026-02-22 00:39:21,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/317160c08a2bdc467f7867954ec7b633d4e8f5cd?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:39:21,451 [ scc.repo] DEBUG - PR 667 Tom-TBT 'Label suggestion interface'
2026-02-22 00:39:21,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/666 HTTP/1.1" 200 None
2026-02-22 00:39:22,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c495cf373b4f9a6ab9eb2c1ba903635ff62b947a HTTP/1.1" 200 None
2026-02-22 00:39:22,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c495cf373b4f9a6ab9eb2c1ba903635ff62b947a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:39:23,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c495cf373b4f9a6ab9eb2c1ba903635ff62b947a/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:39:23,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c495cf373b4f9a6ab9eb2c1ba903635ff62b947a HTTP/1.1" 200 None
2026-02-22 00:39:24,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c495cf373b4f9a6ab9eb2c1ba903635ff62b947a?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:39:24,312 [ scc.repo] DEBUG - PR 666 will-moore 'Standalone app'
2026-02-22 00:39:24,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/665 HTTP/1.1" 200 None
2026-02-22 00:39:25,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/665/comments HTTP/1.1" 200 None
2026-02-22 00:39:25,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b HTTP/1.1" 200 None
2026-02-22 00:39:26,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:39:26,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:39:27,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b HTTP/1.1" 200 None
2026-02-22 00:39:27,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/bdf45b550f4528d17eba292491bbb620ad49022b?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:39:27,660 [ scc.repo] DEBUG - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID'
2026-02-22 00:39:28,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/664 HTTP/1.1" 200 None
2026-02-22 00:39:28,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/664/comments HTTP/1.1" 200 None
2026-02-22 00:39:28,592 [ scc.repo] DEBUG # ... Include label: include
2026-02-22 00:39:29,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea HTTP/1.1" 200 None
2026-02-22 00:39:29,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:39:30,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:39:30,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea HTTP/1.1" 200 None
2026-02-22 00:39:31,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ef2d52de60235379f42877477aa2088551610bea?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:39:31,020 [ scc.repo] DEBUG - PR 664 Nirkan 'Handle many channels '
2026-02-22 00:39:31,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663 HTTP/1.1" 200 None
2026-02-22 00:39:32,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663/comments HTTP/1.1" 200 None
2026-02-22 00:39:32,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/03062bc197e09e7cfcefd73bd86fdb8530cfa819 HTTP/1.1" 200 None
2026-02-22 00:39:33,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/03062bc197e09e7cfcefd73bd86fdb8530cfa819/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:39:33,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/03062bc197e09e7cfcefd73bd86fdb8530cfa819/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:39:34,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/03062bc197e09e7cfcefd73bd86fdb8530cfa819 HTTP/1.1" 200 None
2026-02-22 00:39:34,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/03062bc197e09e7cfcefd73bd86fdb8530cfa819?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:39:34,480 [ scc.repo] DEBUG - PR 663 will-moore 'Zarr'
2026-02-22 00:39:34,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662 HTTP/1.1" 200 None
2026-02-22 00:39:35,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662/comments HTTP/1.1" 200 None
2026-02-22 00:39:35,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac HTTP/1.1" 200 None
2026-02-22 00:39:36,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:39:36,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:39:37,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac HTTP/1.1" 200 None
2026-02-22 00:39:37,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/21baa4e8ba004395bd7a27d520edaa2ed4a540ac?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:39:37,733 [ scc.repo] DEBUG - PR 662 will-moore 'Export script runnable without OMERO'
2026-02-22 00:39:38,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/656 HTTP/1.1" 200 None
2026-02-22 00:39:38,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/656/comments HTTP/1.1" 200 None
2026-02-22 00:39:39,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b6cb152f9484c3a0886812ad5c791c580ee456f6 HTTP/1.1" 200 None
2026-02-22 00:39:39,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b6cb152f9484c3a0886812ad5c791c580ee456f6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:39:40,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b6cb152f9484c3a0886812ad5c791c580ee456f6/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:39:40,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b6cb152f9484c3a0886812ad5c791c580ee456f6 HTTP/1.1" 200 None
2026-02-22 00:39:41,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b6cb152f9484c3a0886812ad5c791c580ee456f6?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:39:41,024 [ scc.repo] DEBUG - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO'
2026-02-22 00:39:41,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654 HTTP/1.1" 200 None
2026-02-22 00:39:41,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654/comments HTTP/1.1" 200 None
2026-02-22 00:39:42,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/62611404a96e14b1db4c58ae3d36ab7d725bd68a HTTP/1.1" 200 None
2026-02-22 00:39:43,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/62611404a96e14b1db4c58ae3d36ab7d725bd68a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:39:43,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/62611404a96e14b1db4c58ae3d36ab7d725bd68a/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:39:44,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/62611404a96e14b1db4c58ae3d36ab7d725bd68a HTTP/1.1" 200 None
2026-02-22 00:39:44,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/62611404a96e14b1db4c58ae3d36ab7d725bd68a?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:39:44,601 [ scc.repo] DEBUG - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes'
2026-02-22 00:39:45,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None
2026-02-22 00:39:45,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None
2026-02-22 00:39:45,492 [ scc.repo] DEBUG # ... Include label: include
2026-02-22 00:39:45,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None
2026-02-22 00:39:46,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:39:46,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:39:47,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None
2026-02-22 00:39:47,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:39:47,809 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 '
2026-02-22 00:39:48,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None
2026-02-22 00:39:48,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None
2026-02-22 00:39:48,705 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:39:48,705 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2026-02-22 00:39:48,705 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:39:48,705 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:39:48,708 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:39:48,711 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:39:48,711 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:39:48,715 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:39:48,752 [ scc.git] DEBUG Updating 9cc36cde..e241dc01
2026-02-22 00:39:49,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None
2026-02-22 00:39:50,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None
2026-02-22 00:39:50,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None
2026-02-22 00:39:51,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None
2026-02-22 00:39:52,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None
2026-02-22 00:39:53,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None
2026-02-22 00:39:53,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None
2026-02-22 00:39:54,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None
2026-02-22 00:39:55,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None
2026-02-22 00:39:55,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None
2026-02-22 00:39:56,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None
2026-02-22 00:39:57,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None
2026-02-22 00:39:57,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None
2026-02-22 00:39:58,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None
2026-02-22 00:39:59,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None
2026-02-22 00:39:59,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None
2026-02-22 00:40:00,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None
2026-02-22 00:40:01,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None
2026-02-22 00:40:02,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None
2026-02-22 00:40:02,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None
2026-02-22 00:40:03,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None
2026-02-22 00:40:04,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None
2026-02-22 00:40:04,157 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head'
2026-02-22 00:40:04,591 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2026-02-22 00:40:04,591 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD
2026-02-22 00:40:04,596 [ scc.git] DEBUG Calling 'git fetch origin pull/654/head'
2026-02-22 00:40:04,860 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2026-02-22 00:40:04,860 [ scc.git] DEBUG * branch refs/pull/654/head -> FETCH_HEAD
2026-02-22 00:40:04,864 [ scc.git] DEBUG Calling 'git fetch origin pull/656/head'
2026-02-22 00:40:05,117 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2026-02-22 00:40:05,117 [ scc.git] DEBUG * branch refs/pull/656/head -> FETCH_HEAD
2026-02-22 00:40:05,122 [ scc.git] DEBUG Calling 'git fetch origin pull/662/head'
2026-02-22 00:40:05,377 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2026-02-22 00:40:05,377 [ scc.git] DEBUG * branch refs/pull/662/head -> FETCH_HEAD
2026-02-22 00:40:05,381 [ scc.git] DEBUG Calling 'git fetch origin pull/663/head'
2026-02-22 00:40:05,639 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2026-02-22 00:40:05,640 [ scc.git] DEBUG * branch refs/pull/663/head -> FETCH_HEAD
2026-02-22 00:40:05,644 [ scc.git] DEBUG Calling 'git fetch origin pull/664/head'
2026-02-22 00:40:05,901 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2026-02-22 00:40:05,902 [ scc.git] DEBUG * branch refs/pull/664/head -> FETCH_HEAD
2026-02-22 00:40:05,906 [ scc.git] DEBUG Calling 'git fetch origin pull/665/head'
2026-02-22 00:40:06,165 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2026-02-22 00:40:06,165 [ scc.git] DEBUG * branch refs/pull/665/head -> FETCH_HEAD
2026-02-22 00:40:06,169 [ scc.git] DEBUG Calling 'git fetch origin pull/666/head'
2026-02-22 00:40:06,438 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2026-02-22 00:40:06,438 [ scc.git] DEBUG * branch refs/pull/666/head -> FETCH_HEAD
2026-02-22 00:40:06,442 [ scc.git] DEBUG Calling 'git fetch origin pull/667/head'
2026-02-22 00:40:06,825 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2026-02-22 00:40:06,825 [ scc.git] DEBUG * branch refs/pull/667/head -> FETCH_HEAD
2026-02-22 00:40:06,829 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:40:06,829 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:40:06,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:06,831 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234'
2026-02-22 00:40:06,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:06,841 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234'
2026-02-22 00:40:06,865 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2026-02-22 00:40:06,866 [ scc.git] DEBUG Auto-merging src/index.html
2026-02-22 00:40:06,866 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js
2026-02-22 00:40:06,866 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:40:06,871 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++-
2026-02-22 00:40:06,871 [ scc.git] DEBUG src/index.html | 11 ++
2026-02-22 00:40:06,871 [ scc.git] DEBUG src/js/views/figure_view.js | 1 +
2026-02-22 00:40:06,871 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-)
2026-02-22 00:40:07,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:07,024 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...62611404a96e14b1db4c58ae3d36ab7d725bd68a'
2026-02-22 00:40:07,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:07,031 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 654 (Refresh metadata button to reload channel names, pixel sizes) 62611404a96e14b1db4c58ae3d36ab7d725bd68a'
2026-02-22 00:40:07,046 [ scc.git] DEBUG Auto-merging src/index.html
2026-02-22 00:40:07,046 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js
2026-02-22 00:40:07,046 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:40:07,052 [ scc.git] DEBUG src/index.html | 5 ++
2026-02-22 00:40:07,052 [ scc.git] DEBUG src/js/models/figure_model.js | 113 ++++++++++++++++++++++++++++++++++++++----
2026-02-22 00:40:07,052 [ scc.git] DEBUG src/js/models/panel_model.js | 23 +++++++--
2026-02-22 00:40:07,052 [ scc.git] DEBUG src/js/views/figure_view.js | 7 +++
2026-02-22 00:40:07,052 [ scc.git] DEBUG 4 files changed, 136 insertions(+), 12 deletions(-)
2026-02-22 00:40:07,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:07,436 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6cb152f9484c3a0886812ad5c791c580ee456f6'
2026-02-22 00:40:07,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:07,444 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 656 (Option to add roi comment when adding ROI from OMERO) b6cb152f9484c3a0886812ad5c791c580ee456f6'
2026-02-22 00:40:07,457 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js
2026-02-22 00:40:07,458 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:40:07,462 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 3 +-
2026-02-22 00:40:07,462 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 74 +++++++++++++++-------
2026-02-22 00:40:07,462 [ scc.git] DEBUG .../modal_dialogs/roi_modal_roi.template.html | 6 ++
2026-02-22 00:40:07,462 [ scc.git] DEBUG .../modal_dialogs/roi_modal_shape.template.html | 5 ++
2026-02-22 00:40:07,462 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 7 +-
2026-02-22 00:40:07,463 [ scc.git] DEBUG 5 files changed, 71 insertions(+), 24 deletions(-)
2026-02-22 00:40:07,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:07,824 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...21baa4e8ba004395bd7a27d520edaa2ed4a540ac'
2026-02-22 00:40:07,830 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:07,832 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 662 (Export script runnable without OMERO) 21baa4e8ba004395bd7a27d520edaa2ed4a540ac'
2026-02-22 00:40:07,860 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2026-02-22 00:40:07,861 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:40:07,865 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 594 +++++++++++++++------
2026-02-22 00:40:07,865 [ scc.git] DEBUG .../scripts/omero/figure_scripts/pilfonts/B24.pbm | Bin 0 -> 8441 bytes
2026-02-22 00:40:07,865 [ scc.git] DEBUG .../scripts/omero/figure_scripts/pilfonts/B24.pil | Bin 0 -> 5143 bytes
2026-02-22 00:40:07,865 [ scc.git] DEBUG .../omero/figure_scripts/pilfonts/FreeSans.ttf | Bin 0 -> 568896 bytes
2026-02-22 00:40:07,865 [ scc.git] DEBUG .../omero/figure_scripts/pilfonts/FreeSansBold.ttf | Bin 0 -> 359272 bytes
2026-02-22 00:40:07,865 [ scc.git] DEBUG .../pilfonts/FreeSansBoldOblique.ttf | Bin 0 -> 301188 bytes
2026-02-22 00:40:07,865 [ scc.git] DEBUG .../figure_scripts/pilfonts/FreeSansOblique.ttf | Bin 0 -> 441432 bytes
2026-02-22 00:40:07,865 [ scc.git] DEBUG 7 files changed, 434 insertions(+), 160 deletions(-)
2026-02-22 00:40:07,865 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/B24.pbm
2026-02-22 00:40:07,865 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/B24.pil
2026-02-22 00:40:07,865 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSans.ttf
2026-02-22 00:40:07,865 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansBold.ttf
2026-02-22 00:40:07,866 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansBoldOblique.ttf
2026-02-22 00:40:07,866 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansOblique.ttf
2026-02-22 00:40:08,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:08,212 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...03062bc197e09e7cfcefd73bd86fdb8530cfa819'
2026-02-22 00:40:08,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:08,220 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 03062bc197e09e7cfcefd73bd86fdb8530cfa819'
2026-02-22 00:40:08,247 [ scc.git] DEBUG Auto-merging omero_figure/views.py
2026-02-22 00:40:08,247 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js
2026-02-22 00:40:08,247 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js
2026-02-22 00:40:08,247 [ scc.git] DEBUG Auto-merging src/js/views/modal_views.js
2026-02-22 00:40:08,247 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js
2026-02-22 00:40:08,248 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:40:08,256 [ scc.git] DEBUG omero_figure/views.py | 11 +-
2026-02-22 00:40:08,256 [ scc.git] DEBUG package-lock.json | 72 ++-
2026-02-22 00:40:08,256 [ scc.git] DEBUG package.json | 4 +-
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/js/models/figure_model.js | 104 ++++-
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/js/models/panel_model.js | 36 +-
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/js/models/zarr_utils.js | 483 +++++++++++++++++++++
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 3 +
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/js/views/chgrp_modal_view.js | 10 +-
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/js/views/crop_modal_view.js | 12 +-
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/js/views/info_panel_view.js | 37 +-
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/js/views/labels_from_maps_modal.js | 10 +-
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/js/views/lutpicker.js | 2 +-
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/js/views/modal_views.js | 33 +-
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/js/views/panel_view.js | 9 +-
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/js/views/right_panel_view.js | 11 +-
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 49 +--
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/js/views/util.js | 48 +-
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/templates/figure_panel.template.html | 2 +-
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/templates/info_panel.template.html | 7 +
2026-02-22 00:40:08,256 [ scc.git] DEBUG .../modal_dialogs/crop_modal_roi.template.html | 3 +-
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/templates/viewport_inner.template.html | 3 +-
2026-02-22 00:40:08,256 [ scc.git] DEBUG src/test.html | 25 ++
2026-02-22 00:40:08,257 [ scc.git] DEBUG 22 files changed, 832 insertions(+), 142 deletions(-)
2026-02-22 00:40:08,257 [ scc.git] DEBUG create mode 100644 src/js/models/zarr_utils.js
2026-02-22 00:40:08,257 [ scc.git] DEBUG create mode 100644 src/test.html
2026-02-22 00:40:08,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:08,603 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ef2d52de60235379f42877477aa2088551610bea'
2026-02-22 00:40:08,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:08,611 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 664 (Handle many channels ) ef2d52de60235379f42877477aa2088551610bea'
2026-02-22 00:40:08,631 [ scc.git] DEBUG Auto-merging omero_figure/views.py
2026-02-22 00:40:08,631 [ scc.git] DEBUG Auto-merging src/index.html
2026-02-22 00:40:08,632 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js
2026-02-22 00:40:08,632 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/panel_model.js
2026-02-22 00:40:08,632 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-02-22 00:40:08,632 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-02-22 00:40:08,637 [ scc.git] DEBUG Calling 'git reset --hard 5d38867bb0cc44e1e20d811d7f21875bec5076d6'
2026-02-22 00:40:08,646 [ scc.git] DEBUG HEAD is now at 5d38867b merge master -Dorg -Ssuccess-only: PR 663 (Zarr)
2026-02-22 00:40:09,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:09,015 [ scc.git] DEBUG Calling 'git merge-base e241dc01b21d8800b6e34e087cbf7099046f68e6 ef2d52de60235379f42877477aa2088551610bea'
2026-02-22 00:40:09,019 [ scc.git] DEBUG Calling 'git diff --name-only b79d638b95385463319f73afc484cf4a1ee3ba13..e241dc01b21d8800b6e34e087cbf7099046f68e6'
2026-02-22 00:40:09,022 [ scc.git] INFO - PR 664 Nirkan 'Handle many channels '
Conflicting PR. Removed from build [OMERO-plugins-push#65](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/consoleText) for more details.
Possible conflicts:
- PR #654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes'
- src/js/models/panel_model.js
- PR #663 will-moore 'Zarr'
- src/js/models/panel_model.js
- Upstream changes
- src/js/models/panel_model.js
--conflicts
2026-02-22 00:40:09,024 [ scc.config] DEBUG Found github.token
2026-02-22 00:40:09,024 [ scc.git] DEBUG Not adding comment to issue #664, already --conflicts.
2026-02-22 00:40:09,024 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bdf45b550f4528d17eba292491bbb620ad49022b'
2026-02-22 00:40:09,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:09,032 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 665 (Ensure projection parameters are within bounds in loadJSON and setID) bdf45b550f4528d17eba292491bbb620ad49022b'
2026-02-22 00:40:09,050 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js
2026-02-22 00:40:09,051 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/figure_model.js
2026-02-22 00:40:09,051 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js
2026-02-22 00:40:09,051 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/panel_model.js
2026-02-22 00:40:09,051 [ scc.git] DEBUG Auto-merging src/js/views/util.js
2026-02-22 00:40:09,051 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-02-22 00:40:09,051 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-02-22 00:40:09,054 [ scc.git] DEBUG Calling 'git reset --hard 5d38867bb0cc44e1e20d811d7f21875bec5076d6'
2026-02-22 00:40:09,060 [ scc.git] DEBUG HEAD is now at 5d38867b merge master -Dorg -Ssuccess-only: PR 663 (Zarr)
2026-02-22 00:40:09,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:09,414 [ scc.git] DEBUG Calling 'git merge-base e241dc01b21d8800b6e34e087cbf7099046f68e6 bdf45b550f4528d17eba292491bbb620ad49022b'
2026-02-22 00:40:09,419 [ scc.git] DEBUG Calling 'git diff --name-only b79d638b95385463319f73afc484cf4a1ee3ba13..e241dc01b21d8800b6e34e087cbf7099046f68e6'
2026-02-22 00:40:09,422 [ scc.git] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID'
Conflicting PR. Removed from build [OMERO-plugins-push#65](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/consoleText) for more details.
Possible conflicts:
- PR #654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes'
- src/js/models/figure_model.js
- src/js/models/panel_model.js
- PR #663 will-moore 'Zarr'
- src/js/models/figure_model.js
- src/js/models/panel_model.js
- PR #664 Nirkan 'Handle many channels '
- src/js/models/panel_model.js
- Upstream changes
- src/js/models/figure_model.js
- src/js/models/panel_model.js
--conflicts
2026-02-22 00:40:09,424 [ scc.config] DEBUG Found github.token
2026-02-22 00:40:09,424 [ scc.git] DEBUG Not adding comment to issue #665, already --conflicts.
2026-02-22 00:40:09,424 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c495cf373b4f9a6ab9eb2c1ba903635ff62b947a'
2026-02-22 00:40:09,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:09,431 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 666 (Standalone app) c495cf373b4f9a6ab9eb2c1ba903635ff62b947a'
2026-02-22 00:40:09,451 [ scc.git] DEBUG Auto-merging omero_figure/views.py
2026-02-22 00:40:09,451 [ scc.git] DEBUG Auto-merging src/index.html
2026-02-22 00:40:09,451 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js
2026-02-22 00:40:09,451 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js
2026-02-22 00:40:09,452 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:40:09,458 [ scc.git] DEBUG .github/workflows/pages.yml | 28 ++++++++
2026-02-22 00:40:09,458 [ scc.git] DEBUG .gitignore | 1 +
2026-02-22 00:40:09,458 [ scc.git] DEBUG deploy_ghpages.sh | 7 ++
2026-02-22 00:40:09,458 [ scc.git] DEBUG omero_figure/views.py | 8 ++-
2026-02-22 00:40:09,458 [ scc.git] DEBUG package.json | 2 +
2026-02-22 00:40:09,459 [ scc.git] DEBUG src/css/figure.css | 3 +-
2026-02-22 00:40:09,459 [ scc.git] DEBUG src/index.html | 79 ++++++++++++++++++++--
2026-02-22 00:40:09,459 [ scc.git] DEBUG src/js/main.js | 36 +++++++---
2026-02-22 00:40:09,459 [ scc.git] DEBUG src/js/models/figure_model.js | 25 +++++++
2026-02-22 00:40:09,459 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 15 +++--
2026-02-22 00:40:09,459 [ scc.git] DEBUG src/js/views/figure_view.js | 101 ++++++++++++++++++++---------
2026-02-22 00:40:09,459 [ scc.git] DEBUG src/js/views/lutpicker.js | 34 ++++++++--
2026-02-22 00:40:09,459 [ scc.git] DEBUG src/js/views/open_local_file_modal.js | 73 +++++++++++++++++++++
2026-02-22 00:40:09,459 [ scc.git] DEBUG src/js/views/util.js | 13 ++++
2026-02-22 00:40:09,459 [ scc.git] DEBUG src/templates/channel_slider.template.html | 4 +-
2026-02-22 00:40:09,459 [ scc.git] DEBUG src/templates/lut_picker.template.html | 6 +-
2026-02-22 00:40:09,459 [ scc.git] DEBUG vite.config.js | 12 +++-
2026-02-22 00:40:09,459 [ scc.git] DEBUG 17 files changed, 388 insertions(+), 59 deletions(-)
2026-02-22 00:40:09,459 [ scc.git] DEBUG create mode 100644 .github/workflows/pages.yml
2026-02-22 00:40:09,459 [ scc.git] DEBUG create mode 100755 deploy_ghpages.sh
2026-02-22 00:40:09,459 [ scc.git] DEBUG create mode 100644 src/js/views/open_local_file_modal.js
2026-02-22 00:40:09,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:09,797 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...317160c08a2bdc467f7867954ec7b633d4e8f5cd'
2026-02-22 00:40:09,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:09,805 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 667 (Label suggestion interface) 317160c08a2bdc467f7867954ec7b633d4e8f5cd'
2026-02-22 00:40:09,822 [ scc.git] DEBUG Auto-merging src/css/figure.css
2026-02-22 00:40:09,822 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js
2026-02-22 00:40:09,823 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:40:09,827 [ scc.git] DEBUG src/css/figure.css | 15 +
2026-02-22 00:40:09,827 [ scc.git] DEBUG src/js/views/label_suggestions.js | 697 ++++++++++++++++++++++++++
2026-02-22 00:40:09,827 [ scc.git] DEBUG src/js/views/right_panel_view.js | 55 ++
2026-02-22 00:40:09,827 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 64 +--
2026-02-22 00:40:09,827 [ scc.git] DEBUG 4 files changed, 776 insertions(+), 55 deletions(-)
2026-02-22 00:40:09,827 [ scc.git] DEBUG create mode 100644 src/js/views/label_suggestions.js
2026-02-22 00:40:10,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:10,196 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:40:10,235 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:40:10,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:10,237 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:40:10,273 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:40:10,279 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8bea89a8d0> has no local changes
2026-02-22 00:40:10,279 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
Updating 9cc36cde..e241dc01
Previously merged:
- PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540'
- PR 661 Rdornier 'Align to grid - check if panels are already in the grid'
- PR 649 jburel 'Replace manual changelog by automated GH release step'
- PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout'
- PR 637 Rdornier 'Fix scalebar position'
- PR 600 Rdornier 'Label on rois'
- PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles'
- PR 651 Rdornier 'More compliant align to grid'
- PR 650 jburel 'Bump Python version'
- PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
- PR 646 JensWendt 'fix word wrap of image names'
- PR 612 will-moore 'Script version'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 616 Rdornier 'Fix labels around border'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 '
- PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes'
- PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO'
- PR 662 will-moore 'Export script runnable without OMERO'
- PR 663 will-moore 'Zarr'
- PR 666 will-moore 'Standalone app'
- PR 667 Tom-TBT 'Label suggestion interface'
Conflicting PRs (not included):
- PR 664 Nirkan 'Handle many channels '
- PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:40:10,287 [ scc.git] DEBUG [detached HEAD 9fbfaa63] merge master -Dorg -Ssuccess-only
2026-02-22 00:40:10,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:40:10,288 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:40:10,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2026-02-22 00:40:11,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None
2026-02-22 00:40:11,211 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:40:11,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None
2026-02-22 00:40:12,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:40:12,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:40:13,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None
2026-02-22 00:40:13,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:40:13,643 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:40:14,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2026-02-22 00:40:14,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2026-02-22 00:40:15,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2026-02-22 00:40:15,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:40:16,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2026-02-22 00:40:16,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:40:16,450 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2026-02-22 00:40:16,450 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:40:16,450 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2026-02-22 00:40:16,450 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:40:16,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:16,453 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:40:16,455 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:40:16,455 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:40:16,458 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:40:16,461 [ scc.git] DEBUG Already up to date.
2026-02-22 00:40:16,461 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2026-02-22 00:40:16,867 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2026-02-22 00:40:16,867 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2026-02-22 00:40:16,871 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head'
2026-02-22 00:40:17,215 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2026-02-22 00:40:17,215 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD
2026-02-22 00:40:17,220 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:40:17,220 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:40:17,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:17,222 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2026-02-22 00:40:17,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:17,227 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2026-02-22 00:40:17,234 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2026-02-22 00:40:17,235 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:40:17,238 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2026-02-22 00:40:17,238 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2026-02-22 00:40:17,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:17,379 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c'
2026-02-22 00:40:17,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:17,384 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c'
2026-02-22 00:40:17,391 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:40:17,394 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-02-22 00:40:17,394 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-02-22 00:40:17,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:17,780 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:40:17,820 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:40:17,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:17,822 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:40:17,858 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:40:17,861 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8bea760690> has no local changes
2026-02-22 00:40:17,861 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
- PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:40:17,867 [ scc.git] DEBUG [detached HEAD 484574c] merge master -Dorg -Ssuccess-only
2026-02-22 00:40:17,867 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:40:17,867 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:40:18,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2026-02-22 00:40:18,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None
2026-02-22 00:40:19,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None
2026-02-22 00:40:19,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None
2026-02-22 00:40:19,705 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:40:20,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2026-02-22 00:40:20,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:40:21,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:40:21,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2026-02-22 00:40:22,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:40:22,295 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2026-02-22 00:40:22,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None
2026-02-22 00:40:23,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None
2026-02-22 00:40:23,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None
2026-02-22 00:40:23,719 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:40:24,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2026-02-22 00:40:24,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:40:25,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2026-02-22 00:40:25,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:40:25,737 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2026-02-22 00:40:26,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None
2026-02-22 00:40:26,230 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:40:26,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2026-02-22 00:40:27,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:40:27,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2026-02-22 00:40:28,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:40:28,270 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2026-02-22 00:40:28,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None
2026-02-22 00:40:28,757 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:40:29,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2026-02-22 00:40:29,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:40:30,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2026-02-22 00:40:30,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:40:30,615 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2026-02-22 00:40:31,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None
2026-02-22 00:40:31,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None
2026-02-22 00:40:31,686 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:40:32,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2026-02-22 00:40:32,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:40:33,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2026-02-22 00:40:33,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:40:33,587 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2026-02-22 00:40:34,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None
2026-02-22 00:40:34,063 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:40:34,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2026-02-22 00:40:35,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:40:35,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2026-02-22 00:40:36,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:40:36,022 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents'
2026-02-22 00:40:36,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None
2026-02-22 00:40:36,499 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:40:37,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2026-02-22 00:40:37,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:40:38,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2026-02-22 00:40:38,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:40:38,544 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2026-02-22 00:40:38,544 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:40:38,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2026-02-22 00:40:38,544 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:40:38,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:38,547 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:40:38,549 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:40:38,549 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:40:38,552 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:40:38,555 [ scc.git] DEBUG Already up to date.
2026-02-22 00:40:38,555 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head'
2026-02-22 00:40:38,952 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2026-02-22 00:40:38,953 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD
2026-02-22 00:40:38,957 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head'
2026-02-22 00:40:39,212 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2026-02-22 00:40:39,212 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD
2026-02-22 00:40:39,216 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head'
2026-02-22 00:40:39,469 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2026-02-22 00:40:39,469 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD
2026-02-22 00:40:39,473 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head'
2026-02-22 00:40:39,722 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2026-02-22 00:40:39,722 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD
2026-02-22 00:40:39,726 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head'
2026-02-22 00:40:40,060 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2026-02-22 00:40:40,060 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD
2026-02-22 00:40:40,065 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head'
2026-02-22 00:40:40,316 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2026-02-22 00:40:40,316 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD
2026-02-22 00:40:40,321 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head'
2026-02-22 00:40:40,574 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2026-02-22 00:40:40,574 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD
2026-02-22 00:40:40,578 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:40:40,578 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:40:40,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:40,580 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2026-02-22 00:40:40,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:40,585 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2026-02-22 00:40:40,593 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:40:40,598 [ scc.git] DEBUG package-lock.json | 12 ++++++------
2026-02-22 00:40:40,598 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-)
2026-02-22 00:40:40,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:40,748 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b'
2026-02-22 00:40:40,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:40,752 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b'
2026-02-22 00:40:40,766 [ scc.git] DEBUG Auto-merging package-lock.json
2026-02-22 00:40:40,767 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:40:40,771 [ scc.git] DEBUG package-lock.json | 625 +++---------------------------------------------------
2026-02-22 00:40:40,771 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-)
2026-02-22 00:40:41,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:41,141 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2026-02-22 00:40:41,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:41,146 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2026-02-22 00:40:41,160 [ scc.git] DEBUG Auto-merging package-lock.json
2026-02-22 00:40:41,160 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2026-02-22 00:40:41,160 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-02-22 00:40:41,160 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-02-22 00:40:41,163 [ scc.git] DEBUG Calling 'git reset --hard 371be8aa6d34aff00753915d4894bd37bc1cd20f'
2026-02-22 00:40:41,167 [ scc.git] DEBUG HEAD is now at 371be8a merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents)
2026-02-22 00:40:41,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:41,538 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2026-02-22 00:40:41,540 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2026-02-22 00:40:41,542 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#65](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
--conflicts
2026-02-22 00:40:41,544 [ scc.config] DEBUG Found github.token
2026-02-22 00:40:41,545 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts.
2026-02-22 00:40:41,545 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2026-02-22 00:40:41,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:41,549 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2026-02-22 00:40:41,564 [ scc.git] DEBUG Auto-merging package-lock.json
2026-02-22 00:40:41,565 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:40:41,569 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++-----
2026-02-22 00:40:41,570 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-)
2026-02-22 00:40:41,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:41,933 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c'
2026-02-22 00:40:41,935 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:41,938 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c'
2026-02-22 00:40:41,953 [ scc.git] DEBUG Auto-merging package-lock.json
2026-02-22 00:40:41,953 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:40:41,958 [ scc.git] DEBUG package-lock.json | 6 +++---
2026-02-22 00:40:41,958 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2026-02-22 00:40:42,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:42,332 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2026-02-22 00:40:42,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:42,337 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2026-02-22 00:40:42,351 [ scc.git] DEBUG Auto-merging package-lock.json
2026-02-22 00:40:42,351 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2026-02-22 00:40:42,351 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-02-22 00:40:42,351 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-02-22 00:40:42,354 [ scc.git] DEBUG Calling 'git reset --hard 3941319f92775b411c573ca40f3f54121ea4157a'
2026-02-22 00:40:42,358 [ scc.git] DEBUG HEAD is now at 3941319 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2026-02-22 00:40:42,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:42,724 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2026-02-22 00:40:42,726 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2026-02-22 00:40:42,729 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#65](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
--conflicts
2026-02-22 00:40:42,731 [ scc.config] DEBUG Found github.token
2026-02-22 00:40:42,731 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts.
2026-02-22 00:40:42,731 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062'
2026-02-22 00:40:42,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:42,735 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062'
2026-02-22 00:40:42,752 [ scc.git] DEBUG Auto-merging package-lock.json
2026-02-22 00:40:42,753 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2026-02-22 00:40:42,753 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-02-22 00:40:42,753 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-02-22 00:40:42,756 [ scc.git] DEBUG Calling 'git reset --hard 3941319f92775b411c573ca40f3f54121ea4157a'
2026-02-22 00:40:42,760 [ scc.git] DEBUG HEAD is now at 3941319 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2026-02-22 00:40:43,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:40:43,116 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062'
2026-02-22 00:40:43,119 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2026-02-22 00:40:43,121 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#65](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
- PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- package-lock.json
--conflicts
2026-02-22 00:40:43,123 [ scc.config] DEBUG Found github.token
2026-02-22 00:40:43,123 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts.
2026-02-22 00:40:43,123 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:40:43,162 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:40:43,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:40:43,164 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:40:43,202 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:40:43,206 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8bea7d3710> has no local changes
2026-02-22 00:40:43,206 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:40:43,212 [ scc.git] DEBUG [detached HEAD d61c68e] merge master -Dorg -Ssuccess-only
2026-02-22 00:40:43,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:40:43,213 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:40:43,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2026-02-22 00:40:44,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/513 HTTP/1.1" 200 None
2026-02-22 00:40:44,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None
2026-02-22 00:40:45,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:40:45,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:40:46,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None
2026-02-22 00:40:46,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/aebb6273b9267a47a47363208fa97dc9c638a688?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:40:46,589 [ scc.repo] DEBUG - PR 513 jburel 'Bump Python version'
2026-02-22 00:40:47,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/512 HTTP/1.1" 200 None
2026-02-22 00:40:47,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None
2026-02-22 00:40:48,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:40:48,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:40:49,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None
2026-02-22 00:40:49,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ec8f9e716c574a715529da53dff61ef178020c43?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:40:49,418 [ scc.repo] DEBUG - PR 512 jburel 'Replace manual changelog by automated GH release step'
2026-02-22 00:40:49,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None
2026-02-22 00:40:50,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None
2026-02-22 00:40:50,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None
2026-02-22 00:40:51,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None
2026-02-22 00:40:51,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None
2026-02-22 00:40:52,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None
2026-02-22 00:40:52,316 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:40:52,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2026-02-22 00:40:53,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:40:53,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:40:54,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2026-02-22 00:40:54,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:40:54,988 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2026-02-22 00:40:55,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None
2026-02-22 00:40:55,456 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:40:56,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2026-02-22 00:40:56,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:40:57,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2026-02-22 00:40:57,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:40:57,427 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2026-02-22 00:40:57,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2026-02-22 00:40:58,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2026-02-22 00:40:58,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2026-02-22 00:40:59,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2026-02-22 00:40:59,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2026-02-22 00:41:00,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:41:00,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2026-02-22 00:41:01,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:41:01,169 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2026-02-22 00:41:01,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2026-02-22 00:41:02,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2026-02-22 00:41:02,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2026-02-22 00:41:03,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:41:03,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2026-02-22 00:41:03,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:41:03,955 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2026-02-22 00:41:04,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2026-02-22 00:41:04,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2026-02-22 00:41:05,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2026-02-22 00:41:05,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:41:06,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2026-02-22 00:41:06,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:41:06,779 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2026-02-22 00:41:07,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None
2026-02-22 00:41:07,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None
2026-02-22 00:41:08,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None
2026-02-22 00:41:08,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:41:09,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:41:09,219 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:41:09,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2026-02-22 00:41:09,219 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:41:09,219 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:09,222 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:41:09,224 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:41:09,224 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:41:09,227 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:41:09,233 [ scc.git] DEBUG Updating 7a798ce..5e2de43
2026-02-22 00:41:09,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None
2026-02-22 00:41:10,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None
2026-02-22 00:41:10,577 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2026-02-22 00:41:10,870 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-02-22 00:41:10,870 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2026-02-22 00:41:10,875 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2026-02-22 00:41:11,340 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-02-22 00:41:11,340 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2026-02-22 00:41:11,344 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2026-02-22 00:41:11,678 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-02-22 00:41:11,678 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2026-02-22 00:41:11,682 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head'
2026-02-22 00:41:12,036 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-02-22 00:41:12,036 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD
2026-02-22 00:41:12,040 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head'
2026-02-22 00:41:12,390 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-02-22 00:41:12,390 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD
2026-02-22 00:41:12,394 [ scc.git] DEBUG Calling 'git fetch origin pull/512/head'
2026-02-22 00:41:12,744 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-02-22 00:41:12,744 [ scc.git] DEBUG * branch refs/pull/512/head -> FETCH_HEAD
2026-02-22 00:41:12,748 [ scc.git] DEBUG Calling 'git fetch origin pull/513/head'
2026-02-22 00:41:13,003 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2026-02-22 00:41:13,003 [ scc.git] DEBUG * branch refs/pull/513/head -> FETCH_HEAD
2026-02-22 00:41:13,007 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:41:13,007 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:41:13,007 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:13,010 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2026-02-22 00:41:13,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:13,016 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2026-02-22 00:41:13,026 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2026-02-22 00:41:13,026 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js
2026-02-22 00:41:13,027 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:41:13,030 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2026-02-22 00:41:13,030 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2026-02-22 00:41:13,031 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2026-02-22 00:41:13,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:13,200 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2026-02-22 00:41:13,204 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:13,206 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2026-02-22 00:41:13,222 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2026-02-22 00:41:13,222 [ scc.git] DEBUG Auto-merging src/app/context.js
2026-02-22 00:41:13,222 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2026-02-22 00:41:13,222 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2026-02-22 00:41:13,223 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:41:13,227 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2026-02-22 00:41:13,227 [ scc.git] DEBUG src/app/context.js | 6 +-
2026-02-22 00:41:13,227 [ scc.git] DEBUG src/app/header.html | 5 +
2026-02-22 00:41:13,227 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2026-02-22 00:41:13,227 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2026-02-22 00:41:13,227 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2026-02-22 00:41:13,227 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2026-02-22 00:41:13,227 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2026-02-22 00:41:13,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:13,744 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2026-02-22 00:41:13,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:13,750 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2026-02-22 00:41:13,761 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2026-02-22 00:41:13,762 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:41:13,765 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2026-02-22 00:41:13,765 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2026-02-22 00:41:13,765 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2026-02-22 00:41:14,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:14,134 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2026-02-22 00:41:14,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:14,140 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2026-02-22 00:41:14,158 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:41:14,166 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++---------------------------
2026-02-22 00:41:14,166 [ scc.git] DEBUG package.json | 2 +-
2026-02-22 00:41:14,166 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-)
2026-02-22 00:41:14,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:14,520 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4'
2026-02-22 00:41:14,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:14,526 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4'
2026-02-22 00:41:14,563 [ scc.git] DEBUG Auto-merging package-lock.json
2026-02-22 00:41:14,563 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2026-02-22 00:41:14,563 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-02-22 00:41:14,563 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-02-22 00:41:14,566 [ scc.git] DEBUG Calling 'git reset --hard 61db3a5116d6f4862b2d8cd078d0e330ccf26728'
2026-02-22 00:41:14,577 [ scc.git] DEBUG HEAD is now at 61db3a5 merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha)
2026-02-22 00:41:14,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:14,914 [ scc.git] DEBUG Calling 'git merge-base 5e2de43ad401fb00690a79644056e0ac15fabfd5 45d08b7e29871ecff0386975c975dacd0865bcc4'
2026-02-22 00:41:14,917 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..5e2de43ad401fb00690a79644056e0ac15fabfd5'
2026-02-22 00:41:14,919 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Conflicting PR. Removed from build [OMERO-plugins-push#65](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/consoleText) for more details.
Possible conflicts:
- PR #499 dependabot[bot] 'Bump nanoid and mocha'
- package-lock.json
--conflicts
2026-02-22 00:41:14,921 [ scc.config] DEBUG Found github.token
2026-02-22 00:41:14,921 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts.
2026-02-22 00:41:14,921 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ec8f9e716c574a715529da53dff61ef178020c43'
2026-02-22 00:41:14,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:14,927 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 512 (Replace manual changelog by automated GH release step) ec8f9e716c574a715529da53dff61ef178020c43'
2026-02-22 00:41:14,941 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:41:14,944 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 +
2026-02-22 00:41:14,944 [ scc.git] DEBUG CHANGELOG.md | 261 -------------------------------------
2026-02-22 00:41:14,944 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 261 deletions(-)
2026-02-22 00:41:14,944 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md
2026-02-22 00:41:15,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:15,306 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aebb6273b9267a47a47363208fa97dc9c638a688'
2026-02-22 00:41:15,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:15,312 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 513 (Bump Python version) aebb6273b9267a47a47363208fa97dc9c638a688'
2026-02-22 00:41:15,323 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml
2026-02-22 00:41:15,324 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:41:15,326 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 ++--
2026-02-22 00:41:15,327 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-)
2026-02-22 00:41:15,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:15,701 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:41:15,739 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:41:15,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:15,741 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:41:15,778 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:41:15,782 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8be85bfb50> has no local changes
2026-02-22 00:41:15,782 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft)
- PR 508 will-moore 'Broadcast channel demo' (stage: draft)
- PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..5e2de43
Previously merged:
- PR 510 joshmoore 'Re-enable omero-test-infra'
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
- PR 512 jburel 'Replace manual changelog by automated GH release step'
- PR 513 jburel 'Bump Python version'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:41:15,788 [ scc.git] DEBUG [detached HEAD d7e4f18] merge master -Dorg -Ssuccess-only
2026-02-22 00:41:15,789 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:41:15,789 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:41:16,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2026-02-22 00:41:16,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None
2026-02-22 00:41:17,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None
2026-02-22 00:41:17,155 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:41:17,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None
2026-02-22 00:41:18,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:41:18,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:41:19,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None
2026-02-22 00:41:19,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:41:19,670 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:41:20,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None
2026-02-22 00:41:20,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2026-02-22 00:41:21,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:41:21,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2026-02-22 00:41:21,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:41:21,969 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2026-02-22 00:41:22,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2026-02-22 00:41:22,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2026-02-22 00:41:23,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2026-02-22 00:41:23,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:41:24,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2026-02-22 00:41:24,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:41:24,769 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2026-02-22 00:41:24,769 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:41:24,769 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2026-02-22 00:41:24,769 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:41:24,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:24,772 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:41:24,774 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:41:24,774 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:41:24,777 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:41:24,780 [ scc.git] DEBUG Already up to date.
2026-02-22 00:41:24,780 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2026-02-22 00:41:25,236 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2026-02-22 00:41:25,236 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2026-02-22 00:41:25,240 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head'
2026-02-22 00:41:25,610 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2026-02-22 00:41:25,610 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD
2026-02-22 00:41:25,614 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head'
2026-02-22 00:41:25,971 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2026-02-22 00:41:25,972 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD
2026-02-22 00:41:25,975 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:41:25,975 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:41:25,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:25,977 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2026-02-22 00:41:25,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:25,983 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2026-02-22 00:41:25,990 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:41:25,994 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2026-02-22 00:41:25,994 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2026-02-22 00:41:25,994 [ scc.git] DEBUG requirements.txt | 2 +-
2026-02-22 00:41:25,994 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2026-02-22 00:41:25,994 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2026-02-22 00:41:25,994 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2026-02-22 00:41:26,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:26,143 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2026-02-22 00:41:26,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:26,148 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2026-02-22 00:41:26,156 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:41:26,158 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-02-22 00:41:26,158 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-02-22 00:41:26,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:26,564 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2026-02-22 00:41:26,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:26,569 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2026-02-22 00:41:26,576 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml
2026-02-22 00:41:26,577 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml
2026-02-22 00:41:26,577 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-02-22 00:41:26,577 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-02-22 00:41:26,579 [ scc.git] DEBUG Calling 'git reset --hard 9dc93bd5d941493c82e8215c46c8c2387d824a9c'
2026-02-22 00:41:26,583 [ scc.git] DEBUG HEAD is now at 9dc93bd merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI)
2026-02-22 00:41:26,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:26,952 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2026-02-22 00:41:26,955 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a'
2026-02-22 00:41:26,957 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PR. Removed from build [OMERO-plugins-push#65](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/consoleText) for more details.
Possible conflicts:
- PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
- .github/workflows/publish_pypi.yml
--conflicts
2026-02-22 00:41:26,959 [ scc.config] DEBUG Found github.token
2026-02-22 00:41:26,959 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts.
2026-02-22 00:41:26,959 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:41:26,998 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:41:26,998 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:27,000 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:41:27,038 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:41:27,041 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8be85bf790> has no local changes
2026-02-22 00:41:27,041 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:41:27,047 [ scc.git] DEBUG [detached HEAD 8b9e4ac] merge master -Dorg -Ssuccess-only
2026-02-22 00:41:27,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:41:27,047 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:41:27,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2026-02-22 00:41:28,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None
2026-02-22 00:41:28,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None
2026-02-22 00:41:28,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None
2026-02-22 00:41:29,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:41:29,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None
2026-02-22 00:41:30,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:41:30,429 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper'
2026-02-22 00:41:30,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2026-02-22 00:41:31,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2026-02-22 00:41:31,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2026-02-22 00:41:32,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:41:32,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2026-02-22 00:41:33,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:41:33,281 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2026-02-22 00:41:33,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2026-02-22 00:41:34,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2026-02-22 00:41:34,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2026-02-22 00:41:35,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:41:35,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2026-02-22 00:41:36,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:41:36,134 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2026-02-22 00:41:36,134 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:41:36,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2026-02-22 00:41:36,134 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:41:36,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:36,137 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:41:36,139 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:41:36,139 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:41:36,142 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:41:36,148 [ scc.git] DEBUG Updating 3cd120c..55060a2
2026-02-22 00:41:36,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None
2026-02-22 00:41:36,856 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2026-02-22 00:41:37,276 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2026-02-22 00:41:37,276 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2026-02-22 00:41:37,280 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2026-02-22 00:41:37,617 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2026-02-22 00:41:37,617 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2026-02-22 00:41:37,621 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head'
2026-02-22 00:41:37,875 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2026-02-22 00:41:37,875 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD
2026-02-22 00:41:37,880 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:41:37,880 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:41:37,880 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:37,883 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2026-02-22 00:41:37,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:37,889 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2026-02-22 00:41:37,900 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2026-02-22 00:41:37,900 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2026-02-22 00:41:37,900 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2026-02-22 00:41:37,900 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2026-02-22 00:41:37,901 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-02-22 00:41:37,901 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-02-22 00:41:37,903 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2026-02-22 00:41:37,907 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2026-02-22 00:41:38,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:38,052 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2026-02-22 00:41:38,056 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501'
2026-02-22 00:41:38,059 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#65](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2026-02-22 00:41:38,061 [ scc.config] DEBUG Found github.token
2026-02-22 00:41:38,061 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2026-02-22 00:41:38,061 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2026-02-22 00:41:38,065 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:38,067 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2026-02-22 00:41:38,079 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2026-02-22 00:41:38,079 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2026-02-22 00:41:38,080 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2026-02-22 00:41:38,080 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-02-22 00:41:38,080 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-02-22 00:41:38,083 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2026-02-22 00:41:38,087 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2026-02-22 00:41:38,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:38,445 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7'
2026-02-22 00:41:38,449 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501'
2026-02-22 00:41:38,452 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#65](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2026-02-22 00:41:38,454 [ scc.config] DEBUG Found github.token
2026-02-22 00:41:38,454 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2026-02-22 00:41:38,454 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f'
2026-02-22 00:41:38,457 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:38,460 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f'
2026-02-22 00:41:38,469 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:41:38,473 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++-
2026-02-22 00:41:38,473 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-)
2026-02-22 00:41:38,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:38,842 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:41:38,880 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:41:38,880 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:38,882 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:41:38,918 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:41:38,922 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8bea781fd0> has no local changes
2026-02-22 00:41:38,922 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 92 dominikl 'add resolve_rois to projectwrapper'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:41:38,928 [ scc.git] DEBUG [detached HEAD 1673bfc] merge master -Dorg -Ssuccess-only
2026-02-22 00:41:38,928 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:41:38,928 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:41:39,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2026-02-22 00:41:39,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None
2026-02-22 00:41:40,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2026-02-22 00:41:40,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:41:41,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:41:41,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2026-02-22 00:41:42,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:41:42,311 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2026-02-22 00:41:42,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None
2026-02-22 00:41:42,813 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:41:43,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2026-02-22 00:41:43,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:41:44,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:41:45,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2026-02-22 00:41:45,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:41:45,456 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2026-02-22 00:41:45,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None
2026-02-22 00:41:45,932 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:41:46,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2026-02-22 00:41:46,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:41:47,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:41:48,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2026-02-22 00:41:48,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:41:48,448 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2026-02-22 00:41:48,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2026-02-22 00:41:49,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2026-02-22 00:41:49,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2026-02-22 00:41:50,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2026-02-22 00:41:50,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2026-02-22 00:41:51,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2026-02-22 00:41:51,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2026-02-22 00:41:51,780 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:41:51,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2026-02-22 00:41:51,780 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:41:51,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:51,783 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:41:51,785 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:41:51,785 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:41:51,788 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:41:51,791 [ scc.git] DEBUG Already up to date.
2026-02-22 00:41:51,791 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head'
2026-02-22 00:41:52,058 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2026-02-22 00:41:52,058 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD
2026-02-22 00:41:52,062 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head'
2026-02-22 00:41:52,313 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2026-02-22 00:41:52,313 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD
2026-02-22 00:41:52,317 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head'
2026-02-22 00:41:52,568 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2026-02-22 00:41:52,568 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD
2026-02-22 00:41:52,572 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:41:52,572 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:41:52,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:52,574 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0'
2026-02-22 00:41:52,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:52,580 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0'
2026-02-22 00:41:52,587 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:41:52,591 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++----------------------------
2026-02-22 00:41:52,591 [ scc.git] DEBUG package.json | 2 +-
2026-02-22 00:41:52,591 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-)
2026-02-22 00:41:52,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:52,741 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80'
2026-02-22 00:41:52,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:52,746 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80'
2026-02-22 00:41:52,755 [ scc.git] DEBUG Auto-merging package-lock.json
2026-02-22 00:41:52,755 [ scc.git] DEBUG Auto-merging package.json
2026-02-22 00:41:52,755 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:41:52,759 [ scc.git] DEBUG package-lock.json | 18 ++++++++++--------
2026-02-22 00:41:52,759 [ scc.git] DEBUG package.json | 2 +-
2026-02-22 00:41:52,759 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-)
2026-02-22 00:41:53,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:53,129 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2026-02-22 00:41:53,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:53,134 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2026-02-22 00:41:53,142 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:41:53,145 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-02-22 00:41:53,145 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-02-22 00:41:53,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:53,543 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:41:53,581 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:41:53,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:53,584 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:41:53,622 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:41:53,625 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8bea7b2950> has no local changes
2026-02-22 00:41:53,625 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:41:53,631 [ scc.git] DEBUG [detached HEAD b020158] merge master -Dorg -Ssuccess-only
2026-02-22 00:41:53,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:41:53,632 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:41:54,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2026-02-22 00:41:54,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None
2026-02-22 00:41:54,524 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:41:55,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None
2026-02-22 00:41:55,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:41:56,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:41:56,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None
2026-02-22 00:41:57,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:41:57,096 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:41:57,096 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:41:57,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2026-02-22 00:41:57,096 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:41:57,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:57,099 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:41:57,101 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:41:57,101 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:41:57,104 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:41:57,107 [ scc.git] DEBUG Already up to date.
2026-02-22 00:41:57,107 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2026-02-22 00:41:57,617 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2026-02-22 00:41:57,617 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2026-02-22 00:41:57,622 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:41:57,622 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:41:57,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:57,624 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e'
2026-02-22 00:41:57,626 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:57,628 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e'
2026-02-22 00:41:57,634 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:41:57,637 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-02-22 00:41:57,637 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-02-22 00:41:57,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:41:57,778 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:41:57,815 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:41:57,815 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:41:57,817 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:41:57,854 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:41:57,860 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8bea776210> has no local changes
2026-02-22 00:41:57,861 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:41:57,866 [ scc.git] DEBUG [detached HEAD dd87e9a] merge master -Dorg -Ssuccess-only
2026-02-22 00:41:57,867 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:41:57,867 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:41:58,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2026-02-22 00:41:58,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None
2026-02-22 00:41:58,890 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:41:59,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2026-02-22 00:41:59,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:42:00,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:42:00,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2026-02-22 00:42:01,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None
2026-02-22 00:42:01,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2026-02-22 00:42:02,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None
2026-02-22 00:42:02,327 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:42:02,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None
2026-02-22 00:42:03,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None
2026-02-22 00:42:03,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2026-02-22 00:42:04,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:42:04,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:42:05,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2026-02-22 00:42:05,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None
2026-02-22 00:42:06,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2026-02-22 00:42:06,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None
2026-02-22 00:42:06,700 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions'
2026-02-22 00:42:07,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None
2026-02-22 00:42:07,186 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:42:07,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2026-02-22 00:42:07,186 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:07,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:07,189 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:42:07,191 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:42:07,192 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:42:07,194 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:42:07,197 [ scc.git] DEBUG Already up to date.
2026-02-22 00:42:07,197 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head'
2026-02-22 00:42:07,464 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2026-02-22 00:42:07,464 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD
2026-02-22 00:42:07,468 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head'
2026-02-22 00:42:07,721 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2026-02-22 00:42:07,721 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD
2026-02-22 00:42:07,725 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:42:07,725 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:07,725 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:07,727 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3'
2026-02-22 00:42:07,730 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:07,732 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3'
2026-02-22 00:42:07,739 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:42:07,742 [ scc.git] DEBUG setup.py | 4 +-
2026-02-22 00:42:07,742 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 +
2026-02-22 00:42:07,742 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++--
2026-02-22 00:42:07,742 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-)
2026-02-22 00:42:07,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:07,897 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301'
2026-02-22 00:42:07,900 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:07,903 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301'
2026-02-22 00:42:07,910 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:42:07,913 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-02-22 00:42:07,913 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-02-22 00:42:08,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:08,308 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:42:08,347 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:08,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:08,349 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:42:08,386 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:42:08,389 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8be85eab90> has no local changes
2026-02-22 00:42:08,390 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
- PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:42:08,395 [ scc.git] DEBUG [detached HEAD e6df11b] merge master -Dorg -Ssuccess-only
2026-02-22 00:42:08,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:42:08,396 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:42:08,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2026-02-22 00:42:09,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None
2026-02-22 00:42:09,485 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:42:10,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None
2026-02-22 00:42:10,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:42:11,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:42:11,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None
2026-02-22 00:42:12,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:42:12,003 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:42:12,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2026-02-22 00:42:12,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2026-02-22 00:42:13,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2026-02-22 00:42:13,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:42:14,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2026-02-22 00:42:14,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:42:14,808 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2026-02-22 00:42:14,808 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:42:14,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2026-02-22 00:42:14,808 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:14,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:14,811 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:42:14,813 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:42:14,813 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:42:14,816 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:42:14,819 [ scc.git] DEBUG Already up to date.
2026-02-22 00:42:14,819 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2026-02-22 00:42:15,096 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2026-02-22 00:42:15,096 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2026-02-22 00:42:15,100 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head'
2026-02-22 00:42:15,352 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2026-02-22 00:42:15,353 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD
2026-02-22 00:42:15,357 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:42:15,357 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:15,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:15,359 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2026-02-22 00:42:15,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:15,364 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2026-02-22 00:42:15,372 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2026-02-22 00:42:15,372 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2026-02-22 00:42:15,372 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2026-02-22 00:42:15,372 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2026-02-22 00:42:15,372 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2026-02-22 00:42:15,372 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2026-02-22 00:42:15,372 [ scc.git] DEBUG Auto-merging setup.py
2026-02-22 00:42:15,372 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2026-02-22 00:42:15,372 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-02-22 00:42:15,373 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-02-22 00:42:15,375 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2026-02-22 00:42:15,379 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2026-02-22 00:42:15,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:15,547 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2026-02-22 00:42:15,549 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2026-02-22 00:42:15,552 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#65](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/views.py
- omero_signup/urls.py
- omero_signup/signup_settings.py
- setup.py
--conflicts
2026-02-22 00:42:15,554 [ scc.config] DEBUG Found github.token
2026-02-22 00:42:15,554 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2026-02-22 00:42:15,554 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa'
2026-02-22 00:42:15,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:15,559 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa'
2026-02-22 00:42:15,565 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:42:15,568 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-02-22 00:42:15,568 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-02-22 00:42:15,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:15,948 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:42:15,986 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:15,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:15,988 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:42:16,028 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:42:16,031 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8be85cabd0> has no local changes
2026-02-22 00:42:16,031 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:42:16,036 [ scc.git] DEBUG [detached HEAD 558ea33] merge master -Dorg -Ssuccess-only
2026-02-22 00:42:16,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:42:16,037 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:42:16,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2026-02-22 00:42:16,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2026-02-22 00:42:17,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2026-02-22 00:42:17,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None
2026-02-22 00:42:18,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2026-02-22 00:42:18,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:42:19,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2026-02-22 00:42:19,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:42:19,854 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker'
2026-02-22 00:42:19,854 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:42:19,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2026-02-22 00:42:19,854 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:19,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:19,857 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:42:19,859 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:42:19,859 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:42:19,862 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:42:19,868 [ scc.git] DEBUG Updating cda3ec6..c8a0015
2026-02-22 00:42:20,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None
2026-02-22 00:42:21,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None
2026-02-22 00:42:21,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None
2026-02-22 00:42:22,061 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2026-02-22 00:42:22,478 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2026-02-22 00:42:22,478 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2026-02-22 00:42:22,482 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:42:22,482 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:22,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:22,485 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623'
2026-02-22 00:42:22,487 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:22,490 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623'
2026-02-22 00:42:22,497 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml
2026-02-22 00:42:22,497 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:42:22,500 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++
2026-02-22 00:42:22,500 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++
2026-02-22 00:42:22,500 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++
2026-02-22 00:42:22,500 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++
2026-02-22 00:42:22,500 [ scc.git] DEBUG ms/test | 2 ++
2026-02-22 00:42:22,500 [ scc.git] DEBUG 5 files changed, 56 insertions(+)
2026-02-22 00:42:22,500 [ scc.git] DEBUG create mode 100644 ms/compose.yml
2026-02-22 00:42:22,500 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile
2026-02-22 00:42:22,500 [ scc.git] DEBUG create mode 100755 ms/test
2026-02-22 00:42:22,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:22,644 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:42:22,683 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:22,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:22,685 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:42:22,722 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:42:22,725 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8be861d2d0> has no local changes
2026-02-22 00:42:22,725 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
Updating cda3ec6..c8a0015
Previously merged:
- PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT'
- PR 82 jburel 'Upgrade python'
- PR 81 erickmartins 'add ulimits to omero-server container'
Merged PRs:
- PR 74 joshmoore 'Add 'ms' target for ./docker'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:42:22,731 [ scc.git] DEBUG [detached HEAD d625178] merge master -Dorg -Ssuccess-only
2026-02-22 00:42:22,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:42:22,732 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:42:23,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None
2026-02-22 00:42:23,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None
2026-02-22 00:42:23,659 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:42:24,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None
2026-02-22 00:42:24,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:42:25,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:42:25,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None
2026-02-22 00:42:26,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:42:26,176 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:42:26,176 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:42:26,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2026-02-22 00:42:26,176 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:26,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:26,179 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:42:26,181 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:42:26,181 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:42:26,183 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:42:26,186 [ scc.git] DEBUG Already up to date.
2026-02-22 00:42:26,186 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2026-02-22 00:42:26,453 [ scc.git] DEBUG From https://github.com/ome/omero-upload
2026-02-22 00:42:26,454 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2026-02-22 00:42:26,457 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:42:26,457 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:26,457 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:26,459 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea'
2026-02-22 00:42:26,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:26,464 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea'
2026-02-22 00:42:26,470 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:42:26,473 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-02-22 00:42:26,473 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-02-22 00:42:26,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:26,614 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:42:26,654 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:26,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:26,656 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:42:26,693 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:42:26,696 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8be861d8d0> has no local changes
2026-02-22 00:42:26,697 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Merged PRs:
- PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:42:26,702 [ scc.git] DEBUG [detached HEAD 86aaf08] merge master -Dorg -Ssuccess-only
2026-02-22 00:42:26,703 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:42:26,703 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:42:27,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2026-02-22 00:42:27,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None
2026-02-22 00:42:27,591 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:42:28,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None
2026-02-22 00:42:28,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:42:29,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:42:29,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None
2026-02-22 00:42:30,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:42:30,003 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:42:30,003 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:42:30,003 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2026-02-22 00:42:30,003 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:30,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:30,006 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:42:30,008 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:42:30,008 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:42:30,011 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:42:30,018 [ scc.git] DEBUG Updating deab817..160d894
2026-02-22 00:42:30,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None
2026-02-22 00:42:30,819 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head'
2026-02-22 00:42:31,091 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2026-02-22 00:42:31,091 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD
2026-02-22 00:42:31,095 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:42:31,095 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:31,095 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:31,098 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902'
2026-02-22 00:42:31,100 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:31,102 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902'
2026-02-22 00:42:31,110 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:42:31,112 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-02-22 00:42:31,112 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-02-22 00:42:31,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:31,257 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:42:31,294 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:31,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:31,296 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:42:31,331 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:42:31,334 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8be8635c90> has no local changes
2026-02-22 00:42:31,334 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:42:31,340 [ scc.git] DEBUG [detached HEAD 1714cf0] merge master -Dorg -Ssuccess-only
2026-02-22 00:42:31,340 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:42:31,340 [ scc.git] INFO Overriding base-branch from master to main
2026-02-22 00:42:31,340 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:42:31,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2026-02-22 00:42:32,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None
2026-02-22 00:42:32,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None
2026-02-22 00:42:33,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None
2026-02-22 00:42:33,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:42:34,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:42:34,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None
2026-02-22 00:42:35,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:42:35,193 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import'
2026-02-22 00:42:35,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2026-02-22 00:42:36,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2026-02-22 00:42:36,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2026-02-22 00:42:37,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2026-02-22 00:42:37,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:42:38,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2026-02-22 00:42:38,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:42:38,529 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2026-02-22 00:42:38,529 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:42:38,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2026-02-22 00:42:38,529 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:38,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:38,532 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2026-02-22 00:42:38,534 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:42:38,534 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2026-02-22 00:42:38,537 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2026-02-22 00:42:38,543 [ scc.git] DEBUG Updating 8f3c313..4e1e685
2026-02-22 00:42:39,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None
2026-02-22 00:42:39,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None
2026-02-22 00:42:40,076 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2026-02-22 00:42:40,352 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2026-02-22 00:42:40,353 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2026-02-22 00:42:40,356 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head'
2026-02-22 00:42:40,613 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2026-02-22 00:42:40,613 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD
2026-02-22 00:42:40,617 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:42:40,617 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:40,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:40,619 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2026-02-22 00:42:40,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:40,624 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2026-02-22 00:42:40,631 [ scc.git] DEBUG Auto-merging README.rst
2026-02-22 00:42:40,631 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2026-02-22 00:42:40,631 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2026-02-22 00:42:40,631 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py
2026-02-22 00:42:40,631 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2026-02-22 00:42:40,631 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2026-02-22 00:42:40,634 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368'
2026-02-22 00:42:40,637 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1
2026-02-22 00:42:40,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:40,787 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2026-02-22 00:42:40,790 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368'
2026-02-22 00:42:40,792 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#65](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2026-02-22 00:42:40,794 [ scc.config] DEBUG Found github.token
2026-02-22 00:42:40,794 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2026-02-22 00:42:40,794 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc'
2026-02-22 00:42:40,797 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:40,799 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc'
2026-02-22 00:42:40,806 [ scc.git] DEBUG Auto-merging README.rst
2026-02-22 00:42:40,806 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py
2026-02-22 00:42:40,807 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:42:40,810 [ scc.git] DEBUG README.rst | 3 +
2026-02-22 00:42:40,810 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++
2026-02-22 00:42:40,810 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 +
2026-02-22 00:42:40,810 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++-
2026-02-22 00:42:40,810 [ scc.git] DEBUG setup.py | 5 +-
2026-02-22 00:42:40,810 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-)
2026-02-22 00:42:40,810 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html
2026-02-22 00:42:41,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:41,189 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:42:41,227 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:41,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:41,230 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:42:41,267 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:42:41,270 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8bea6d7150> has no local changes
2026-02-22 00:42:41,270 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Updating 8f3c313..4e1e685
Previously merged:
- PR 23 lubianat 'Fix mix of .rst and .md on README'
- PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
Merged PRs:
- PR 21 will-moore 'Web zarr import'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:42:41,276 [ scc.git] DEBUG [detached HEAD c690f87] merge master -Dorg -Ssuccess-only
2026-02-22 00:42:41,276 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:42:41,277 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:42:41,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None
2026-02-22 00:42:42,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None
2026-02-22 00:42:42,223 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:42:42,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None
2026-02-22 00:42:43,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:42:43,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:42:44,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None
2026-02-22 00:42:44,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:42:44,746 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:42:44,746 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:42:44,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2026-02-22 00:42:44,746 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:44,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:44,749 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:42:44,752 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:42:44,752 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:42:44,754 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:42:44,757 [ scc.git] DEBUG Already up to date.
2026-02-22 00:42:44,757 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head'
2026-02-22 00:42:45,025 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror
2026-02-22 00:42:45,025 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD
2026-02-22 00:42:45,029 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:42:45,029 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:45,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:45,031 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9'
2026-02-22 00:42:45,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:45,036 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9'
2026-02-22 00:42:45,042 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:42:45,044 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-02-22 00:42:45,044 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-02-22 00:42:45,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:45,199 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:42:45,239 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:45,239 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:45,241 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:42:45,277 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:42:45,280 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8be860dbd0> has no local changes
2026-02-22 00:42:45,280 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Merged PRs:
- PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:42:45,286 [ scc.git] DEBUG [detached HEAD 3c8a2b7] merge master -Dorg -Ssuccess-only
2026-02-22 00:42:45,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:42:45,286 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:42:45,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None
2026-02-22 00:42:46,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None
2026-02-22 00:42:46,175 [ scc.repo] DEBUG # ... Include label: dependencies
2026-02-22 00:42:46,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None
2026-02-22 00:42:47,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-02-22 00:42:47,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-02-22 00:42:48,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None
2026-02-22 00:42:48,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2
2026-02-22 00:42:48,665 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:42:48,665 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:42:48,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2026-02-22 00:42:48,665 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:48,665 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:48,667 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:42:48,670 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:42:48,670 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:42:48,672 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:42:48,675 [ scc.git] DEBUG Already up to date.
2026-02-22 00:42:48,675 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head'
2026-02-22 00:42:48,949 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest
2026-02-22 00:42:48,949 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD
2026-02-22 00:42:48,953 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:42:48,953 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:48,953 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:48,955 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478'
2026-02-22 00:42:48,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:48,960 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478'
2026-02-22 00:42:48,966 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-02-22 00:42:48,969 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2026-02-22 00:42:48,969 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-02-22 00:42:49,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:49,113 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:42:49,152 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:49,152 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:49,155 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:42:49,191 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:42:49,195 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8be85d9710> has no local changes
2026-02-22 00:42:49,195 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Merged PRs:
- PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:42:49,201 [ scc.git] DEBUG [detached HEAD d1dba2e] merge master -Dorg -Ssuccess-only
2026-02-22 00:42:49,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:42:49,201 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:42:49,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2
2026-02-22 00:42:49,551 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:42:49,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2026-02-22 00:42:49,551 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:49,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:49,554 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-02-22 00:42:49,556 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:42:49,556 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-02-22 00:42:49,559 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-02-22 00:42:49,562 [ scc.git] DEBUG Already up to date.
2026-02-22 00:42:49,562 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:42:49,562 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:49,562 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:49,564 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:42:49,600 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:49,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:49,602 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:42:49,637 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:42:49,640 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8be8655150> has no local changes
2026-02-22 00:42:49,640 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:42:49,645 [ scc.git] DEBUG [detached HEAD 477bf53] merge master -Dorg -Ssuccess-only
2026-02-22 00:42:49,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:42:49,646 [ scc.git] INFO Overriding base-branch from master to develop
2026-02-22 00:42:49,646 [ scc.repo] DEBUG ## PRs found:
2026-02-22 00:42:50,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2026-02-22 00:42:50,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2026-02-22 00:42:51,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2026-02-22 00:42:51,043 [ scc.repo] DEBUG ## Branches found:
2026-02-22 00:42:51,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2026-02-22 00:42:51,043 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:51,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:51,045 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2026-02-22 00:42:51,048 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-02-22 00:42:51,048 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2026-02-22 00:42:51,051 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2026-02-22 00:42:51,062 [ scc.git] DEBUG Updating 4b4c755..5b4d768
2026-02-22 00:42:51,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None
2026-02-22 00:42:52,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None
2026-02-22 00:42:52,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None
2026-02-22 00:42:53,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None
2026-02-22 00:42:54,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None
2026-02-22 00:42:54,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None
2026-02-22 00:42:55,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2026-02-22 00:42:55,477 [ scc.git] DEBUG ## Unique users: []
2026-02-22 00:42:55,477 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:55,477 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:55,480 [ scc.git] DEBUG Calling 'git submodule update'
2026-02-22 00:42:55,517 [ scc.git] DEBUG Get sha1 of %s
2026-02-22 00:42:55,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-02-22 00:42:55,519 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:42:55,558 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:42:55,562 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8be8483990> has no local changes
2026-02-22 00:42:55,562 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
Updating 4b4c755..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
- PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:42:55,568 [ scc.git] DEBUG [detached HEAD b66975c] merge master -Dorg -Ssuccess-only
2026-02-22 00:42:55,568 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:42:55,569 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-02-22 00:42:55,638 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2026-02-22 00:42:55,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:55,867 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2026-02-22 00:42:55,869 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2026-02-22 00:42:56,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:56,263 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2026-02-22 00:42:56,264 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2026-02-22 00:42:56,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:56,678 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2026-02-22 00:42:56,680 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2026-02-22 00:42:57,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:57,085 [ scc.config] DEBUG Found submodule.omero-figure.url
2026-02-22 00:42:57,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:57,480 [ scc.config] DEBUG Found submodule.omero-figure.branch
2026-02-22 00:42:57,482 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2026-02-22 00:42:57,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:57,885 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2026-02-22 00:42:57,887 [ scc.config] DEBUG Found submodule.omero-gallery.url
2026-02-22 00:42:58,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:58,278 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2026-02-22 00:42:58,280 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2026-02-22 00:42:58,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:58,677 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2026-02-22 00:42:58,678 [ scc.config] DEBUG Found submodule.omero-mapr.url
2026-02-22 00:42:59,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:59,085 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2026-02-22 00:42:59,087 [ scc.config] DEBUG Found submodule.omero-metadata.url
2026-02-22 00:42:59,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:59,516 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2026-02-22 00:42:59,518 [ scc.config] DEBUG Found submodule.omero-parade.url
2026-02-22 00:42:59,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:42:59,911 [ scc.config] DEBUG Found submodule.omero-parade.branch
2026-02-22 00:42:59,912 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2026-02-22 00:43:00,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:43:00,308 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2026-02-22 00:43:00,310 [ scc.config] DEBUG Found submodule.omero-rois.url
2026-02-22 00:43:00,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:43:00,848 [ scc.config] DEBUG Found submodule.omero-signup.url
2026-02-22 00:43:01,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:43:01,245 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2026-02-22 00:43:01,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:43:01,653 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2026-02-22 00:43:01,655 [ scc.config] DEBUG Found submodule.omero-upload.url
2026-02-22 00:43:02,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:43:02,064 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2026-02-22 00:43:02,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:43:02,452 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2026-02-22 00:43:02,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:43:02,846 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2026-02-22 00:43:02,848 [ scc.config] DEBUG Found submodule.omero-weberror.url
2026-02-22 00:43:03,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:43:03,245 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2026-02-22 00:43:03,247 [ scc.config] DEBUG Found submodule.omero-webtest.url
2026-02-22 00:43:03,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:43:03,638 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2026-02-22 00:43:03,640 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2026-02-22 00:43:04,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:43:04,028 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2026-02-22 00:43:04,029 [ scc.config] DEBUG Found submodule.scripts.url
2026-02-22 00:43:04,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-02-22 00:43:04,424 [ scc.config] DEBUG Found submodule.scripts.branch
2026-02-22 00:43:04,424 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-02-22 00:43:04,502 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8bea967f50> has local changes
2026-02-22 00:43:04,502 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Updating ce6e13c..68b7303
Previously merged:
- PR 74 jburel 'Replace manual changelog by automated GH release step'
- PR 75 jburel 'Sort the new channels to ensure settings are set'
- PR 71 dominikl 'Escape slash character in image names'
- PR 69 dominikl 'Fix help text for impo/export commands'
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 181 will-moore 'Add labels support for import' (exclude comment)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..9530c10
Previously merged:
- PR 192 jburel 'Set Omero pixel size'
- PR 186 jburel 'Create release from tag'
- PR 187 dominikl 'Fix target-by-name option'
- PR 180 will-moore 'Import command'
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
Conflicting PRs (not included):
- PR 174 will-moore 'Skip wells'
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
- PR 182 will-moore 'Revert "Remove support for Plate import"'
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
Updating 9cc36cde..e241dc01
Previously merged:
- PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540'
- PR 661 Rdornier 'Align to grid - check if panels are already in the grid'
- PR 649 jburel 'Replace manual changelog by automated GH release step'
- PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout'
- PR 637 Rdornier 'Fix scalebar position'
- PR 600 Rdornier 'Label on rois'
- PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles'
- PR 651 Rdornier 'More compliant align to grid'
- PR 650 jburel 'Bump Python version'
- PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
- PR 646 JensWendt 'fix word wrap of image names'
- PR 612 will-moore 'Script version'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 616 Rdornier 'Fix labels around border'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 '
- PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes'
- PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO'
- PR 662 will-moore 'Export script runnable without OMERO'
- PR 663 will-moore 'Zarr'
- PR 666 will-moore 'Standalone app'
- PR 667 Tom-TBT 'Label suggestion interface'
Conflicting PRs (not included):
- PR 664 Nirkan 'Handle many channels '
- PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
- PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft)
- PR 508 will-moore 'Broadcast channel demo' (stage: draft)
- PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..5e2de43
Previously merged:
- PR 510 joshmoore 'Re-enable omero-test-infra'
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
- PR 512 jburel 'Replace manual changelog by automated GH release step'
- PR 513 jburel 'Bump Python version'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 92 dominikl 'add resolve_rois to projectwrapper'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
- PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
Updating cda3ec6..c8a0015
Previously merged:
- PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT'
- PR 82 jburel 'Upgrade python'
- PR 81 erickmartins 'add ulimits to omero-server container'
Merged PRs:
- PR 74 joshmoore 'Add 'ms' target for ./docker'
Repository: ome/omero-upload
Already up to date.
Merged PRs:
- PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Updating 8f3c313..4e1e685
Previously merged:
- PR 23 lubianat 'Fix mix of .rst and .md on README'
- PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
Merged PRs:
- PR 21 will-moore 'Web zarr import'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Merged PRs:
- PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: openmicroscopy/omero-webtest
Already up to date.
Merged PRs:
- PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/rOMERO-gateway
Already up to date.
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
Updating 4b4c755..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
- PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Generated by OMERO-plugins-push#65 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/65/)'
2026-02-22 00:43:04,514 [ scc.git] DEBUG [detached HEAD acd796c] merge master -Dorg -Ssuccess-only
2026-02-22 00:43:04,514 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2026-02-22 00:43:04,514 [ scc.merge] INFO Repository: ome/omero-plugins
2026-02-22 00:43:04,514 [ scc.merge] INFO Already up to date.
2026-02-22 00:43:04,514 [ scc.merge] INFO
2026-02-22 00:43:04,514 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,514 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2026-02-22 00:43:04,514 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2026-02-22 00:43:04,514 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2026-02-22 00:43:04,514 [ scc.merge] INFO
2026-02-22 00:43:04,514 [ scc.merge] INFO Repository: ome/minimal-omero-client
2026-02-22 00:43:04,514 [ scc.merge] INFO Already up to date.
2026-02-22 00:43:04,514 [ scc.merge] INFO
2026-02-22 00:43:04,514 [ scc.merge] INFO
2026-02-22 00:43:04,514 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2026-02-22 00:43:04,514 [ scc.merge] INFO Excluded PRs:
2026-02-22 00:43:04,514 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2026-02-22 00:43:04,514 [ scc.merge] INFO Already up to date.
2026-02-22 00:43:04,515 [ scc.merge] INFO
2026-02-22 00:43:04,515 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:43:04,515 [ scc.merge] INFO
2026-02-22 00:43:04,515 [ scc.merge] INFO Repository: ome/omero-cli-render
2026-02-22 00:43:04,515 [ scc.merge] INFO Excluded PRs:
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2026-02-22 00:43:04,515 [ scc.merge] INFO Updating ce6e13c..68b7303
2026-02-22 00:43:04,515 [ scc.merge] INFO Previously merged:
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step'
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set'
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names'
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands'
2026-02-22 00:43:04,515 [ scc.merge] INFO
2026-02-22 00:43:04,515 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2026-02-22 00:43:04,515 [ scc.merge] INFO
2026-02-22 00:43:04,515 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2026-02-22 00:43:04,515 [ scc.merge] INFO Excluded PRs:
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment)
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft)
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft)
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft)
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
2026-02-22 00:43:04,515 [ scc.merge] INFO Updating 11d3587..9530c10
2026-02-22 00:43:04,515 [ scc.merge] INFO Previously merged:
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size'
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 186 jburel 'Create release from tag'
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option'
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 180 will-moore 'Import command'
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0'
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer'
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()'
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests'
2026-02-22 00:43:04,515 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2026-02-22 00:43:04,515 [ scc.merge] INFO
2026-02-22 00:43:04,515 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
2026-02-22 00:43:04,516 [ scc.merge] INFO
2026-02-22 00:43:04,516 [ scc.merge] INFO Conflicting PRs (not included):
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 174 will-moore 'Skip wells'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"'
2026-02-22 00:43:04,516 [ scc.merge] INFO
2026-02-22 00:43:04,516 [ scc.merge] INFO Repository: ome/omero-figure
2026-02-22 00:43:04,516 [ scc.merge] INFO Excluded PRs:
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
2026-02-22 00:43:04,516 [ scc.merge] INFO Updating 9cc36cde..e241dc01
2026-02-22 00:43:04,516 [ scc.merge] INFO Previously merged:
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 650 jburel 'Bump Python version'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 612 will-moore 'Script version'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2026-02-22 00:43:04,516 [ scc.merge] INFO
2026-02-22 00:43:04,516 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 '
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 662 will-moore 'Export script runnable without OMERO'
2026-02-22 00:43:04,516 [ scc.merge] INFO - PR 663 will-moore 'Zarr'
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 666 will-moore 'Standalone app'
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface'
2026-02-22 00:43:04,517 [ scc.merge] INFO
2026-02-22 00:43:04,517 [ scc.merge] INFO Conflicting PRs (not included):
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels '
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID'
2026-02-22 00:43:04,517 [ scc.merge] INFO
2026-02-22 00:43:04,517 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2026-02-22 00:43:04,517 [ scc.merge] INFO Already up to date.
2026-02-22 00:43:04,517 [ scc.merge] INFO
2026-02-22 00:43:04,517 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:43:04,517 [ scc.merge] INFO
2026-02-22 00:43:04,517 [ scc.merge] INFO Repository: ome/omero-gallery
2026-02-22 00:43:04,517 [ scc.merge] INFO Already up to date.
2026-02-22 00:43:04,517 [ scc.merge] INFO
2026-02-22 00:43:04,517 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2026-02-22 00:43:04,517 [ scc.merge] INFO
2026-02-22 00:43:04,517 [ scc.merge] INFO Conflicting PRs (not included):
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2026-02-22 00:43:04,517 [ scc.merge] INFO
2026-02-22 00:43:04,517 [ scc.merge] INFO Repository: ome/omero-iviewer
2026-02-22 00:43:04,517 [ scc.merge] INFO Excluded PRs:
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft)
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft)
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure)
2026-02-22 00:43:04,517 [ scc.merge] INFO Updating 7a798ce..5e2de43
2026-02-22 00:43:04,517 [ scc.merge] INFO Previously merged:
2026-02-22 00:43:04,517 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra'
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2026-02-22 00:43:04,518 [ scc.merge] INFO
2026-02-22 00:43:04,518 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step'
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 513 jburel 'Bump Python version'
2026-02-22 00:43:04,518 [ scc.merge] INFO
2026-02-22 00:43:04,518 [ scc.merge] INFO Conflicting PRs (not included):
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2026-02-22 00:43:04,518 [ scc.merge] INFO
2026-02-22 00:43:04,518 [ scc.merge] INFO Repository: ome/omero-mapr
2026-02-22 00:43:04,518 [ scc.merge] INFO Excluded PRs:
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2026-02-22 00:43:04,518 [ scc.merge] INFO Already up to date.
2026-02-22 00:43:04,518 [ scc.merge] INFO
2026-02-22 00:43:04,518 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2026-02-22 00:43:04,518 [ scc.merge] INFO
2026-02-22 00:43:04,518 [ scc.merge] INFO Conflicting PRs (not included):
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:43:04,518 [ scc.merge] INFO
2026-02-22 00:43:04,518 [ scc.merge] INFO Repository: ome/omero-metadata
2026-02-22 00:43:04,518 [ scc.merge] INFO Updating 3cd120c..55060a2
2026-02-22 00:43:04,518 [ scc.merge] INFO Previously merged:
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2026-02-22 00:43:04,518 [ scc.merge] INFO
2026-02-22 00:43:04,518 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper'
2026-02-22 00:43:04,518 [ scc.merge] INFO
2026-02-22 00:43:04,518 [ scc.merge] INFO Conflicting PRs (not included):
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2026-02-22 00:43:04,518 [ scc.merge] INFO
2026-02-22 00:43:04,518 [ scc.merge] INFO Repository: ome/omero-parade
2026-02-22 00:43:04,518 [ scc.merge] INFO Excluded PRs:
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2026-02-22 00:43:04,518 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2026-02-22 00:43:04,519 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2026-02-22 00:43:04,519 [ scc.merge] INFO Already up to date.
2026-02-22 00:43:04,519 [ scc.merge] INFO
2026-02-22 00:43:04,519 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,519 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2026-02-22 00:43:04,519 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2026-02-22 00:43:04,519 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2026-02-22 00:43:04,519 [ scc.merge] INFO
2026-02-22 00:43:04,519 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2026-02-22 00:43:04,519 [ scc.merge] INFO Already up to date.
2026-02-22 00:43:04,519 [ scc.merge] INFO
2026-02-22 00:43:04,519 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,519 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:43:04,519 [ scc.merge] INFO
2026-02-22 00:43:04,519 [ scc.merge] INFO Repository: ome/omero-rois
2026-02-22 00:43:04,519 [ scc.merge] INFO Excluded PRs:
2026-02-22 00:43:04,519 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2026-02-22 00:43:04,519 [ scc.merge] INFO Already up to date.
2026-02-22 00:43:04,519 [ scc.merge] INFO
2026-02-22 00:43:04,519 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,519 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions'
2026-02-22 00:43:04,519 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:43:04,519 [ scc.merge] INFO
2026-02-22 00:43:04,519 [ scc.merge] INFO Repository: ome/omero-signup
2026-02-22 00:43:04,519 [ scc.merge] INFO Already up to date.
2026-02-22 00:43:04,519 [ scc.merge] INFO
2026-02-22 00:43:04,519 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,519 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:43:04,519 [ scc.merge] INFO
2026-02-22 00:43:04,519 [ scc.merge] INFO Conflicting PRs (not included):
2026-02-22 00:43:04,519 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2026-02-22 00:43:04,519 [ scc.merge] INFO
2026-02-22 00:43:04,519 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2026-02-22 00:43:04,519 [ scc.merge] INFO Excluded PRs:
2026-02-22 00:43:04,519 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2026-02-22 00:43:04,519 [ scc.merge] INFO Updating cda3ec6..c8a0015
2026-02-22 00:43:04,519 [ scc.merge] INFO Previously merged:
2026-02-22 00:43:04,519 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT'
2026-02-22 00:43:04,519 [ scc.merge] INFO - PR 82 jburel 'Upgrade python'
2026-02-22 00:43:04,519 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container'
2026-02-22 00:43:04,519 [ scc.merge] INFO
2026-02-22 00:43:04,519 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,520 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker'
2026-02-22 00:43:04,520 [ scc.merge] INFO
2026-02-22 00:43:04,520 [ scc.merge] INFO Repository: ome/omero-upload
2026-02-22 00:43:04,520 [ scc.merge] INFO Already up to date.
2026-02-22 00:43:04,520 [ scc.merge] INFO
2026-02-22 00:43:04,520 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,520 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:43:04,520 [ scc.merge] INFO
2026-02-22 00:43:04,520 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2026-02-22 00:43:04,520 [ scc.merge] INFO Updating deab817..160d894
2026-02-22 00:43:04,520 [ scc.merge] INFO Previously merged:
2026-02-22 00:43:04,520 [ scc.merge] INFO - PR 20 jburel 'Build'
2026-02-22 00:43:04,520 [ scc.merge] INFO
2026-02-22 00:43:04,520 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,520 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:43:04,520 [ scc.merge] INFO
2026-02-22 00:43:04,520 [ scc.merge] INFO Repository: ome/omero-web-zarr
2026-02-22 00:43:04,520 [ scc.merge] INFO Excluded PRs:
2026-02-22 00:43:04,520 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2026-02-22 00:43:04,520 [ scc.merge] INFO Updating 8f3c313..4e1e685
2026-02-22 00:43:04,520 [ scc.merge] INFO Previously merged:
2026-02-22 00:43:04,520 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README'
2026-02-22 00:43:04,520 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
2026-02-22 00:43:04,520 [ scc.merge] INFO
2026-02-22 00:43:04,520 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,520 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import'
2026-02-22 00:43:04,520 [ scc.merge] INFO
2026-02-22 00:43:04,520 [ scc.merge] INFO Conflicting PRs (not included):
2026-02-22 00:43:04,520 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2026-02-22 00:43:04,520 [ scc.merge] INFO
2026-02-22 00:43:04,520 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2026-02-22 00:43:04,520 [ scc.merge] INFO Already up to date.
2026-02-22 00:43:04,520 [ scc.merge] INFO
2026-02-22 00:43:04,520 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,520 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:43:04,520 [ scc.merge] INFO
2026-02-22 00:43:04,520 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2026-02-22 00:43:04,520 [ scc.merge] INFO Already up to date.
2026-02-22 00:43:04,520 [ scc.merge] INFO
2026-02-22 00:43:04,520 [ scc.merge] INFO Merged PRs:
2026-02-22 00:43:04,520 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2026-02-22 00:43:04,520 [ scc.merge] INFO
2026-02-22 00:43:04,521 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2026-02-22 00:43:04,521 [ scc.merge] INFO Already up to date.
2026-02-22 00:43:04,521 [ scc.merge] INFO
2026-02-22 00:43:04,521 [ scc.merge] INFO
2026-02-22 00:43:04,521 [ scc.merge] INFO Repository: ome/scripts
2026-02-22 00:43:04,521 [ scc.merge] INFO Excluded PRs:
2026-02-22 00:43:04,521 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2026-02-22 00:43:04,521 [ scc.merge] INFO Updating 4b4c755..5b4d768
2026-02-22 00:43:04,521 [ scc.merge] INFO Previously merged:
2026-02-22 00:43:04,521 [ scc.merge] INFO - PR 231 jburel 'Create Release '
2026-02-22 00:43:04,521 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label'
2026-02-22 00:43:04,521 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2026-02-22 00:43:04,521 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix'
2026-02-22 00:43:04,521 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
2026-02-22 00:43:04,521 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes'
2026-02-22 00:43:04,521 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests'
2026-02-22 00:43:04,521 [ scc.merge] INFO
2026-02-22 00:43:04,521 [ scc.merge] INFO
2026-02-22 00:43:04,521 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-02-22 00:43:04,521 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2026-02-22 00:43:04,523 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2026-02-22 00:43:04,525 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2026-02-22 00:43:04,528 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2026-02-22 00:43:04,530 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2026-02-22 00:43:04,532 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2026-02-22 00:43:04,534 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2026-02-22 00:43:04,537 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2026-02-22 00:43:04,539 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2026-02-22 00:43:04,541 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2026-02-22 00:43:04,543 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2026-02-22 00:43:04,545 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2026-02-22 00:43:04,547 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,550 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2026-02-22 00:43:04,550 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2026-02-22 00:43:04,552 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2026-02-22 00:43:04,554 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2026-02-22 00:43:04,556 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2026-02-22 00:43:04,558 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2026-02-22 00:43:04,560 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,562 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,562 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2026-02-22 00:43:04,562 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2026-02-22 00:43:04,564 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2026-02-22 00:43:04,567 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2026-02-22 00:43:04,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2026-02-22 00:43:04,569 [ scc.git] DEBUG Calling 'git remote'
2026-02-22 00:43:04,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.6-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 5467b26] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
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.eggs/
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Entering 'omero-figure'
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Entering 'omero-prometheus-tools'
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Entering 'rOMERO-gateway'
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Entering 'scripts'
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[detached HEAD b5bb737] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2026-02-22 00:43:50,199 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2026-02-22 00:43:59,301 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2026-02-22 00:44:01,785 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2026-02-22 00:44:06,360 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2026-02-22 00:44:48,498 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS