Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/e9d96de4efbb3e39a2ce24824e54985c7c2760a6ed46c5415ea0aa1fd1e18d41/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 75 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.2.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.2.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.10.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.13.0-py3-none-any.whl.metadata (3.4 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-50.0.1-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.3 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.5.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (45 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.19-py3-none-any.whl.metadata (9.2 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.7.22-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.10.0-py3-none-any.whl (455 kB) Using cached pyjwt-2.13.0-py3-none-any.whl (31 kB) Using cached cryptography-50.0.1-cp311-abi3-manylinux_2_34_x86_64.whl (4.7 MB) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.5.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (262 kB) Using cached idna-3.19-py3-none-any.whl (68 kB) Using cached certifi-2026.7.22-py3-none-any.whl (136 kB) Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.10.0 PyYAML-6.0.3 certifi-2026.7.22 cffi-2.1.1 charset_normalizer-3.5.1 cryptography-50.0.1 future-1.0.0 idna-3.19 pycparser-3.0 pyjwt-2.13.0 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-09-10 12:39:29,124 [ scc.config] DEBUG Found github.token 2026-09-10 12:39:29,125 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-09-10 12:39:29,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:39:29,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:39:30,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-09-10 12:39:30,278 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 13:09 2026-09-10 12:39:30,279 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:39:30,289 [ scc.git] DEBUG Check current status 2026-09-10 12:39:30,290 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:39:30,310 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-09-10 12:39:30,311 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:39:30,514 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-09-10 12:39:30,582 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-09-10 12:39:30,646 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-09-10 12:39:30,699 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-09-10 12:39:30,766 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-09-10 12:39:30,804 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-09-10 12:39:30,861 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-09-10 12:39:30,949 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-09-10 12:39:30,992 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-09-10 12:39:31,040 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-09-10 12:39:31,085 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-09-10 12:39:31,121 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-09-10 12:39:31,178 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-09-10 12:39:31,217 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-09-10 12:39:31,272 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-09-10 12:39:31,307 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-09-10 12:39:31,364 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-09-10 12:39:31,409 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-09-10 12:39:31,444 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-09-10 12:39:31,481 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-09-10 12:39:31,521 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-09-10 12:39:31,568 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-09-10 12:39:31,580 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:39:31,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-09-10 12:39:32,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:39:32,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:39:33,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:39:33,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:39:33,940 [ scc.git] DEBUG Resetting... 2026-09-10 12:39:33,940 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-09-10 12:39:34,272 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-09-10 12:39:34,273 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-09-10 12:39:35,507 [ scc.git] DEBUG Check current status 2026-09-10 12:39:35,507 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:39:35,522 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-09-10 12:39:35,523 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:39:35,711 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-09-10 12:39:35,743 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-09-10 12:39:35,776 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-09-10 12:39:35,820 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-09-10 12:39:35,864 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-09-10 12:39:35,893 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-09-10 12:39:35,929 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-09-10 12:39:35,986 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-09-10 12:39:36,017 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-09-10 12:39:36,055 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-09-10 12:39:36,088 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-09-10 12:39:36,122 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-09-10 12:39:36,154 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-09-10 12:39:36,186 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-09-10 12:39:36,221 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-09-10 12:39:36,256 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-09-10 12:39:36,290 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-09-10 12:39:36,321 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-09-10 12:39:36,355 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-09-10 12:39:36,386 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-09-10 12:39:36,417 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-09-10 12:39:36,438 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-09-10 12:39:36,439 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-09-10 12:39:36,439 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-09-10 12:39:36,439 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-09-10 12:39:36,439 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-09-10 12:39:36,439 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-09-10 12:39:36,439 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:39:36,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-09-10 12:39:37,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-09-10 12:39:37,374 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:39:37,374 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-09-10 12:39:37,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-09-10 12:39:37,956 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:39:37,956 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-09-10 12:39:38,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-09-10 12:39:38,494 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:39:38,494 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-09-10 12:39:38,494 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:39:38,494 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:39:38,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:39:38,506 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:39:38,522 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:39:38,522 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:39:38,539 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:39:38,604 [ scc.git] DEBUG Already up to date. 2026-09-10 12:39:38,604 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-09-10 12:39:39,128 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-09-10 12:39:39,128 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-09-10 12:39:39,156 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-09-10 12:39:39,611 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-09-10 12:39:39,611 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-09-10 12:39:39,656 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-09-10 12:39:40,145 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-09-10 12:39:40,145 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-09-10 12:39:40,174 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:39:40,174 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:39:40,174 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:39:40,187 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-09-10 12:39:40,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:39:40,219 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-09-10 12:39:40,883 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:39:40,966 [ scc.git] DEBUG scripts | 2 +- 2026-09-10 12:39:40,966 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-10 12:39:41,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:39:41,242 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-09-10 12:39:41,272 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:39:41,283 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-09-10 12:39:42,076 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:39:42,145 [ scc.git] DEBUG omero-figure | 2 +- 2026-09-10 12:39:42,145 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-10 12:39:42,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:39:42,359 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-09-10 12:39:42,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:39:42,391 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-09-10 12:39:43,057 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:39:43,119 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-09-10 12:39:43,119 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-10 12:39:43,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:39:43,328 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:39:44,315 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-09-10 12:39:45,476 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-09-10 12:39:45,838 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-09-10 12:39:45,839 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:39:45,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:39:45,851 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:39:48,625 [ scc.git] DEBUG has no local changes 2026-09-10 12:39:48,625 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:39:50,625 [ scc.git] DEBUG [detached HEAD fde332f] merge master -Dorg -Snone 2026-09-10 12:39:50,628 [ scc.merge] INFO Repository: ome/omero-plugins 2026-09-10 12:39:50,628 [ scc.merge] INFO Already up to date. 2026-09-10 12:39:50,628 [ scc.merge] INFO 2026-09-10 12:39:50,628 [ scc.merge] INFO Merged PRs: 2026-09-10 12:39:50,628 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-09-10 12:39:50,628 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-09-10 12:39:50,628 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-09-10 12:39:50,628 [ scc.merge] INFO 2026-09-10 12:39:50,628 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-09-10 12:39:50,628 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out 'd5f88d80a2b1a3eacda64b591e1cfe6df4f51a82' Submodule path 'omero-figure': checked out '3195c3df4e7bf2507d9c942d5d8c9a8566498147' Submodule path 'omero-iviewer': checked out '6c554250ea1528ff339ac06c3fe1e0621fe48576' Submodule path 'omero-metadata': checked out '6a653e49e3589ccb463166506896639f6f0a5a2b' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-09-10 12:40:15,844 [ scc.config] DEBUG Found github.token 2026-09-10 12:40:15,846 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-09-10 12:40:16,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:40:16,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:40:17,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-09-10 12:40:17,056 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 13:09 2026-09-10 12:40:17,057 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:40:17,068 [ scc.git] DEBUG Check current status 2026-09-10 12:40:17,069 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:40:17,090 [ scc.git] DEBUG fde332f merge master -Dorg -Snone 2026-09-10 12:40:17,091 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:40:17,313 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-09-10 12:40:17,353 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-09-10 12:40:17,401 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-09-10 12:40:17,458 [ scc.git] DEBUG +d5f88d80a2b1a3eacda64b591e1cfe6df4f51a82 omero-cli-zarr (v0.9.0-1-gd5f88d8) 2026-09-10 12:40:17,532 [ scc.git] DEBUG +3195c3df4e7bf2507d9c942d5d8c9a8566498147 omero-figure (v8.0.1-1-g3195c3df) 2026-09-10 12:40:17,584 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-09-10 12:40:17,632 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-09-10 12:40:17,721 [ scc.git] DEBUG +6c554250ea1528ff339ac06c3fe1e0621fe48576 omero-iviewer (v0.19.0-1-g6c554250) 2026-09-10 12:40:17,760 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-09-10 12:40:17,807 [ scc.git] DEBUG +6a653e49e3589ccb463166506896639f6f0a5a2b omero-metadata (v0.14.0-2-g6a653e4) 2026-09-10 12:40:17,841 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-09-10 12:40:17,876 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-09-10 12:40:17,909 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-09-10 12:40:17,944 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-09-10 12:40:17,978 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-09-10 12:40:18,016 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-09-10 12:40:18,049 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-09-10 12:40:18,086 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-09-10 12:40:18,133 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-09-10 12:40:18,177 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-09-10 12:40:18,222 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-09-10 12:40:18,250 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-09-10 12:40:18,263 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:40:18,263 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-09-10 12:40:18,265 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-09-10 12:40:18,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-09-10 12:40:19,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:40:19,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:40:20,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:40:20,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:40:20,677 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:40:20,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-09-10 12:40:20,861 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:40:20,875 [ scc.git] DEBUG Check current status 2026-09-10 12:40:20,875 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:40:20,899 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-09-10 12:40:20,900 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:40:21,016 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:40:21,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-09-10 12:40:21,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:40:22,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:40:22,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:40:23,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:40:23,467 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:40:23,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:40:23,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-09-10 12:40:23,605 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:40:23,620 [ scc.git] DEBUG Check current status 2026-09-10 12:40:23,620 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:40:23,643 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-09-10 12:40:23,645 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:40:23,817 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:40:24,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-09-10 12:40:24,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:40:25,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:40:25,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:40:26,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:40:26,184 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:40:26,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:40:26,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-09-10 12:40:26,345 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:40:26,359 [ scc.git] DEBUG Check current status 2026-09-10 12:40:26,359 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:40:26,381 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-09-10 12:40:26,382 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:40:26,537 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:40:26,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-09-10 12:40:27,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:40:27,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:40:28,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:40:28,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:40:28,910 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:40:29,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:40:29,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-09-10 12:40:29,088 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:40:29,109 [ scc.git] DEBUG Check current status 2026-09-10 12:40:29,109 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:40:29,146 [ scc.git] DEBUG d5f88d8 Bump version: 0.9.0 → 0.9.1.dev0 2026-09-10 12:40:29,147 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:40:29,347 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:40:29,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-09-10 12:40:30,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:40:30,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:40:31,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:40:31,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:40:31,694 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:40:31,842 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:40:31,843 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-09-10 12:40:31,843 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:40:31,866 [ scc.git] DEBUG Check current status 2026-09-10 12:40:31,867 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:40:31,904 [ scc.git] DEBUG 3195c3df Bump version: 8.0.1 → 8.0.2.dev0 2026-09-10 12:40:31,906 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:40:32,061 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:40:32,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-09-10 12:40:33,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:40:33,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:40:34,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:40:34,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:40:34,524 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:40:34,672 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:40:34,673 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-09-10 12:40:34,673 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:40:34,685 [ scc.git] DEBUG Check current status 2026-09-10 12:40:34,685 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:40:34,705 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-09-10 12:40:34,706 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:40:34,893 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:40:35,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-09-10 12:40:35,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:40:36,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:40:36,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:40:37,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:40:37,269 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:40:37,439 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:40:37,440 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-09-10 12:40:37,440 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:40:37,460 [ scc.git] DEBUG Check current status 2026-09-10 12:40:37,460 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:40:37,494 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-09-10 12:40:37,496 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:40:37,709 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:40:38,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-09-10 12:40:38,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:40:39,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:40:39,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:40:40,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:40:40,049 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:40:40,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:40:40,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-09-10 12:40:40,241 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:40:40,269 [ scc.git] DEBUG Check current status 2026-09-10 12:40:40,269 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:40:40,327 [ scc.git] DEBUG 6c554250 add dev 2026-09-10 12:40:40,330 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:40:40,532 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:40:40,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-09-10 12:40:41,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:40:41,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:40:42,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:40:42,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:40:42,935 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:40:43,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:40:43,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-09-10 12:40:43,115 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:40:43,144 [ scc.git] DEBUG Check current status 2026-09-10 12:40:43,144 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:40:43,176 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-09-10 12:40:43,178 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:40:43,401 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:40:43,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-09-10 12:40:44,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:40:44,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:40:45,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:40:45,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:40:45,824 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:40:46,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:40:46,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-09-10 12:40:46,017 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:40:46,039 [ scc.git] DEBUG Check current status 2026-09-10 12:40:46,039 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:40:46,075 [ scc.git] DEBUG 6a653e4 Fix workflow permission indentation 2026-09-10 12:40:46,076 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:40:46,324 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:40:46,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-09-10 12:40:47,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:40:47,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:40:48,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:40:48,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:40:48,654 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:40:48,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:40:48,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-09-10 12:40:48,864 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:40:48,884 [ scc.git] DEBUG Check current status 2026-09-10 12:40:48,884 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:40:48,915 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-09-10 12:40:48,918 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:40:49,109 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:40:49,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-09-10 12:40:50,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:40:50,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:40:50,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:40:51,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:40:51,588 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:40:51,802 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:40:51,803 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-09-10 12:40:51,804 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:40:51,828 [ scc.git] DEBUG Check current status 2026-09-10 12:40:51,828 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:40:51,852 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-09-10 12:40:51,854 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:40:52,061 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:40:52,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-09-10 12:40:52,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:40:53,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:40:53,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:40:54,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:40:54,400 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:40:54,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:40:54,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-09-10 12:40:54,609 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:40:54,637 [ scc.git] DEBUG Check current status 2026-09-10 12:40:54,637 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:40:54,663 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-09-10 12:40:54,664 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:40:54,883 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:40:55,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-09-10 12:40:55,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:40:56,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:40:56,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:40:57,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:40:57,215 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:40:57,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:40:57,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-09-10 12:40:57,340 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:40:57,354 [ scc.git] DEBUG Check current status 2026-09-10 12:40:57,354 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:40:57,373 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-09-10 12:40:57,374 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:40:57,500 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:40:57,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-09-10 12:40:58,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:40:58,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:40:59,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:40:59,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:40:59,872 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:41:00,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:41:00,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-09-10 12:41:00,008 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:41:00,023 [ scc.git] DEBUG Check current status 2026-09-10 12:41:00,023 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:41:00,047 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-09-10 12:41:00,048 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:41:00,193 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:41:00,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-09-10 12:41:00,410 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-09-10 12:41:00,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-09-10 12:41:01,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:41:01,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:41:02,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:41:02,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:41:02,774 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:41:02,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:41:02,943 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-09-10 12:41:02,945 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:41:02,982 [ scc.git] DEBUG Check current status 2026-09-10 12:41:02,982 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:41:03,010 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-09-10 12:41:03,012 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:41:03,193 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:41:03,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-09-10 12:41:04,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:41:04,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:41:05,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:41:05,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:41:05,665 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:41:05,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:41:05,842 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-09-10 12:41:05,843 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:41:05,862 [ scc.git] DEBUG Check current status 2026-09-10 12:41:05,862 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:41:05,887 [ scc.git] DEBUG 160d894 Fix display of code 2026-09-10 12:41:05,889 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:41:06,053 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:41:06,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-09-10 12:41:07,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:41:07,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:41:08,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:41:08,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:41:08,615 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:41:08,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:41:08,800 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-09-10 12:41:08,801 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:41:08,821 [ scc.git] DEBUG Check current status 2026-09-10 12:41:08,821 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:41:08,848 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-09-10 12:41:08,849 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:41:09,051 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:41:09,051 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-09-10 12:41:09,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-09-10 12:41:09,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:41:10,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:41:10,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:41:11,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:41:11,338 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:41:11,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:41:11,521 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-09-10 12:41:11,522 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:41:11,558 [ scc.git] DEBUG Check current status 2026-09-10 12:41:11,558 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:41:11,597 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-09-10 12:41:11,598 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:41:11,804 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:41:12,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-09-10 12:41:12,036 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-09-10 12:41:12,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-09-10 12:41:12,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:41:13,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:41:13,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:41:14,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:41:14,492 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:41:14,651 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:41:14,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-09-10 12:41:14,664 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:41:14,681 [ scc.git] DEBUG Check current status 2026-09-10 12:41:14,681 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:41:14,727 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-09-10 12:41:14,728 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:41:14,947 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:41:15,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-09-10 12:41:15,183 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-09-10 12:41:15,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-09-10 12:41:16,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:41:16,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:41:17,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:41:17,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:41:17,579 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:41:17,774 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:41:17,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-09-10 12:41:17,778 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:41:17,794 [ scc.git] DEBUG Check current status 2026-09-10 12:41:17,794 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:41:17,861 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-09-10 12:41:17,863 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:41:18,068 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:41:18,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-09-10 12:41:19,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:41:19,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:41:19,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:41:20,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:41:20,459 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:41:20,651 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:41:20,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-09-10 12:41:20,652 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-10 12:41:20,670 [ scc.git] DEBUG Check current status 2026-09-10 12:41:20,670 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:41:20,755 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-09-10 12:41:20,756 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:41:20,932 [ scc.config] DEBUG Found remote.origin.url 2026-09-10 12:41:20,933 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-09-10 12:41:21,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-09-10 12:41:21,191 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-09-10 12:41:21,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-09-10 12:41:22,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-10 12:41:22,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-10 12:41:23,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-10 12:41:23,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-10 12:41:23,653 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:41:23,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:41:23,819 [ scc.git] DEBUG Resetting... 2026-09-10 12:41:23,819 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-09-10 12:41:24,356 [ scc.git] DEBUG HEAD is now at fde332f merge master -Dorg -Snone 2026-09-10 12:41:24,357 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-09-10 12:41:25,038 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-09-10 12:41:25,777 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-09-10 12:41:27,638 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-09-10 12:41:29,060 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-09-10 12:41:29,535 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-09-10 12:41:30,014 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-09-10 12:41:30,411 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-09-10 12:41:30,781 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-09-10 12:41:31,080 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-09-10 12:41:31,721 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-09-10 12:41:31,754 [ scc.git] DEBUG Check current status 2026-09-10 12:41:31,754 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-10 12:41:31,786 [ scc.git] DEBUG fde332f merge master -Dorg -Snone 2026-09-10 12:41:31,788 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-10 12:41:32,075 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-09-10 12:41:32,134 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-09-10 12:41:32,200 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-09-10 12:41:32,280 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-09-10 12:41:32,361 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-09-10 12:41:32,416 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-09-10 12:41:32,468 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-09-10 12:41:32,573 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798cee) 2026-09-10 12:41:32,627 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-09-10 12:41:32,694 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-09-10 12:41:32,739 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-09-10 12:41:32,787 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-09-10 12:41:32,845 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-09-10 12:41:32,902 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-09-10 12:41:32,963 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-09-10 12:41:33,028 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-09-10 12:41:33,081 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-09-10 12:41:33,123 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-09-10 12:41:33,176 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-09-10 12:41:33,232 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-09-10 12:41:33,278 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-09-10 12:41:33,312 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-09-10 12:41:33,313 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-09-10 12:41:33,313 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-09-10 12:41:33,313 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-09-10 12:41:33,313 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-09-10 12:41:33,313 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-09-10 12:41:33,313 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-09-10 12:41:33,313 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:41:33,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-09-10 12:41:34,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-09-10 12:41:34,244 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:41:34,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-09-10 12:41:35,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:41:36,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-09-10 12:41:36,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:41:36,487 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-09-10 12:41:36,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-09-10 12:41:36,986 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:41:37,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-09-10 12:41:38,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:41:38,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-09-10 12:41:39,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:41:39,119 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-09-10 12:41:39,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-09-10 12:41:39,660 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:41:40,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-09-10 12:41:40,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:41:41,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-09-10 12:41:41,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:41:41,814 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-09-10 12:41:41,814 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:41:41,814 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:41:41,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:41:41,828 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:41:41,846 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:41:41,846 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:41:41,875 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:41:41,937 [ scc.git] DEBUG Already up to date. 2026-09-10 12:41:41,937 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-09-10 12:41:42,505 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-09-10 12:41:42,505 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-09-10 12:41:42,541 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-09-10 12:41:43,076 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-09-10 12:41:43,076 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-09-10 12:41:43,111 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-09-10 12:41:43,656 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-09-10 12:41:43,656 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-09-10 12:41:43,691 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:41:43,691 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:41:43,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:41:43,709 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-09-10 12:41:43,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:41:43,757 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-09-10 12:41:43,832 [ scc.git] DEBUG Already up to date. 2026-09-10 12:41:44,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:41:44,037 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-09-10 12:41:44,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:41:44,089 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-09-10 12:41:44,170 [ scc.git] DEBUG Already up to date. 2026-09-10 12:41:44,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:41:44,516 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-09-10 12:41:44,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:41:44,565 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-09-10 12:41:44,640 [ scc.git] DEBUG Already up to date. 2026-09-10 12:41:44,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:41:44,969 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:41:46,349 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:41:46,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:41:46,367 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:41:46,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-09-10 12:41:46,630 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:41:46,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-09-10 12:41:46,630 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:41:46,630 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:41:46,647 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:41:46,666 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:41:46,666 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:41:46,690 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:41:46,758 [ scc.git] DEBUG Already up to date. 2026-09-10 12:41:46,758 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:41:46,758 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:41:46,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:41:46,775 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:41:46,925 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:41:46,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:41:46,942 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:41:47,120 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:41:47,186 [ scc.git] DEBUG has no local changes 2026-09-10 12:41:47,186 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:41:47,341 [ scc.git] DEBUG [detached HEAD bc7d83d] merge master -Dorg -Ssuccess-only 2026-09-10 12:41:47,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:41:47,343 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:41:47,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-09-10 12:41:48,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-09-10 12:41:48,374 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:41:49,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-09-10 12:41:49,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:41:50,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:41:50,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-09-10 12:41:51,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:41:51,255 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:41:51,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-09-10 12:41:52,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-09-10 12:41:52,299 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:41:52,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-09-10 12:41:52,299 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:41:52,299 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:41:52,317 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:41:52,332 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:41:52,332 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:41:52,354 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:41:52,409 [ scc.git] DEBUG Already up to date. 2026-09-10 12:41:52,409 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-09-10 12:41:52,925 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-09-10 12:41:52,925 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-09-10 12:41:52,950 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:41:52,950 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:41:52,950 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:41:52,965 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-09-10 12:41:52,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:41:52,998 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-09-10 12:41:53,200 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:41:53,281 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-10 12:41:53,281 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-10 12:41:53,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:41:53,500 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:41:53,641 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:41:53,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:41:53,656 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:41:53,807 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:41:53,865 [ scc.git] DEBUG has no local changes 2026-09-10 12:41:53,865 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:41:54,005 [ scc.git] DEBUG [detached HEAD 8a3e2b7] merge master -Dorg -Ssuccess-only 2026-09-10 12:41:54,006 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:41:54,007 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:41:54,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-09-10 12:41:54,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-09-10 12:41:55,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-09-10 12:41:56,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-09-10 12:41:56,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:41:57,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:41:57,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-09-10 12:41:58,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:41:58,494 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-09-10 12:41:59,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-09-10 12:41:59,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-09-10 12:41:59,620 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:41:59,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-09-10 12:41:59,622 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:41:59,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:41:59,645 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:41:59,672 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:41:59,672 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:41:59,711 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:41:59,996 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-09-10 12:42:00,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-09-10 12:42:01,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-09-10 12:42:02,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-09-10 12:42:03,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-09-10 12:42:03,720 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-09-10 12:42:04,661 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-09-10 12:42:04,661 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-09-10 12:42:04,696 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:42:04,696 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:42:04,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:42:04,718 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-09-10 12:42:04,801 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:42:04,824 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-09-10 12:42:05,081 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-09-10 12:42:05,187 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:42:05,299 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-09-10 12:42:05,299 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-09-10 12:42:05,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:42:05,542 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:42:05,748 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:42:05,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:42:05,776 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:42:05,956 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:42:06,045 [ scc.git] DEBUG has no local changes 2026-09-10 12:42:06,045 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:42:06,326 [ scc.git] DEBUG [detached HEAD f9fab6b] merge master -Dorg -Ssuccess-only 2026-09-10 12:42:06,332 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:42:06,332 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:42:06,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-09-10 12:42:07,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-09-10 12:42:07,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-09-10 12:42:08,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-09-10 12:42:09,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:42:09,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:42:10,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-09-10 12:42:10,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-09-10 12:42:11,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-09-10 12:42:11,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-09-10 12:42:11,705 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-09-10 12:42:12,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-09-10 12:42:12,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-09-10 12:42:13,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-09-10 12:42:14,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:42:14,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:42:15,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-09-10 12:42:15,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-09-10 12:42:16,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-09-10 12:42:16,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-09-10 12:42:16,699 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-09-10 12:42:17,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-09-10 12:42:17,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-09-10 12:42:18,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-09-10 12:42:18,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-09-10 12:42:19,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-09-10 12:42:19,454 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:42:19,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-09-10 12:42:19,455 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:42:19,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:42:19,485 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:42:19,518 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:42:19,518 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:42:19,610 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:42:20,244 [ scc.git] DEBUG Updating 11d3587..d5f88d8 2026-09-10 12:42:20,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/193 HTTP/1.1" 200 None 2026-09-10 12:42:21,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/182 HTTP/1.1" 200 None 2026-09-10 12:42:22,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/194 HTTP/1.1" 200 None 2026-09-10 12:42:23,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/197 HTTP/1.1" 200 None 2026-09-10 12:42:24,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/196 HTTP/1.1" 200 None 2026-09-10 12:42:25,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-09-10 12:42:26,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-09-10 12:42:27,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-09-10 12:42:28,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-09-10 12:42:29,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-09-10 12:42:30,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-09-10 12:42:31,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-09-10 12:42:32,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-09-10 12:42:33,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-09-10 12:42:33,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-09-10 12:42:35,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-09-10 12:42:36,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-09-10 12:42:36,241 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-09-10 12:42:37,576 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-09-10 12:42:37,576 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-09-10 12:42:37,617 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-09-10 12:42:38,482 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-09-10 12:42:38,482 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-09-10 12:42:38,523 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:42:38,523 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:42:38,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:42:38,541 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-09-10 12:42:38,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:42:38,705 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-09-10 12:42:39,422 [ scc.git] DEBUG Auto-merging README.rst 2026-09-10 12:42:39,422 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-09-10 12:42:39,422 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-09-10 12:42:39,422 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-09-10 12:42:39,422 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-09-10 12:42:39,422 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-09-10 12:42:39,422 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-09-10 12:42:39,422 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-09-10 12:42:39,422 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-09-10 12:42:39,422 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-09-10 12:42:39,422 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-09-10 12:42:39,459 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-10 12:42:39,461 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-10 12:42:39,544 [ scc.git] DEBUG Calling 'git reset --hard d5f88d80a2b1a3eacda64b591e1cfe6df4f51a82' 2026-09-10 12:42:39,912 [ scc.git] DEBUG HEAD is now at d5f88d8 Bump version: 0.9.0 → 0.9.1.dev0 2026-09-10 12:42:40,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:42:40,144 [ scc.git] DEBUG Calling 'git merge-base d5f88d80a2b1a3eacda64b591e1cfe6df4f51a82 e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-09-10 12:42:40,264 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..d5f88d80a2b1a3eacda64b591e1cfe6df4f51a82' 2026-09-10 12:42:40,312 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py - test/integration/clitest/test_export.py - src/omero_zarr/util.py - src/omero_zarr/masks.py - src/omero_zarr/cli.py --conflicts 2026-09-10 12:42:40,332 [ scc.config] DEBUG Found github.token 2026-09-10 12:42:40,332 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-09-10 12:42:40,332 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-09-10 12:42:40,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:42:40,484 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-09-10 12:42:40,887 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-09-10 12:42:40,887 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-09-10 12:42:40,887 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-09-10 12:42:40,887 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-09-10 12:42:40,922 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-10 12:42:40,923 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-10 12:42:40,974 [ scc.git] DEBUG Calling 'git reset --hard d5f88d80a2b1a3eacda64b591e1cfe6df4f51a82' 2026-09-10 12:42:41,192 [ scc.git] DEBUG HEAD is now at d5f88d8 Bump version: 0.9.0 → 0.9.1.dev0 2026-09-10 12:42:41,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:42:41,391 [ scc.git] DEBUG Calling 'git merge-base d5f88d80a2b1a3eacda64b591e1cfe6df4f51a82 f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-09-10 12:42:41,502 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..d5f88d80a2b1a3eacda64b591e1cfe6df4f51a82' 2026-09-10 12:42:41,559 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - test/integration/clitest/test_export.py - src/omero_zarr/masks.py - Upstream changes - test/integration/clitest/test_export.py - src/omero_zarr/masks.py --conflicts 2026-09-10 12:42:41,577 [ scc.config] DEBUG Found github.token 2026-09-10 12:42:41,577 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-09-10 12:42:41,577 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:42:41,767 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:42:41,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:42:41,790 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:42:41,999 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:42:42,110 [ scc.git] DEBUG has no local changes 2026-09-10 12:42:42,110 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..d5f88d8 Previously merged: - PR 193 dominikl 'Only parse import uris if stated' - PR 182 will-moore 'Revert "Remove support for Plate import"' - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' - PR 197 pwalczysko 'Fix pragma' - PR 196 will-moore 'Storage options only if needed' - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:42:42,370 [ scc.git] DEBUG [detached HEAD a2d3bd9] merge master -Dorg -Ssuccess-only 2026-09-10 12:42:42,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:42:42,373 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:42:42,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-09-10 12:42:43,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/706 HTTP/1.1" 200 None 2026-09-10 12:42:43,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/706/comments HTTP/1.1" 200 None 2026-09-10 12:42:44,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b5991992467c0abe6a61ce59bbdb9686129e93d2?page=1 HTTP/1.1" 200 None 2026-09-10 12:42:44,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b5991992467c0abe6a61ce59bbdb9686129e93d2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:42:45,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b5991992467c0abe6a61ce59bbdb9686129e93d2/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:42:45,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b5991992467c0abe6a61ce59bbdb9686129e93d2?page=1 HTTP/1.1" 200 None 2026-09-10 12:42:46,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b5991992467c0abe6a61ce59bbdb9686129e93d2?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:42:46,484 [ scc.repo] DEBUG - PR 706 will-moore 'Figure repo migration' 2026-09-10 12:42:46,484 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:42:46,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-09-10 12:42:46,486 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:42:46,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:42:46,512 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:42:46,538 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:42:46,538 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:42:46,723 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:42:48,682 [ scc.git] ERROR stderr (git merge --ff-only origin/master): Updating files: 74% (61/82) Updating files: 75% (62/82) Updating files: 76% (63/82) Updating files: 78% (64/82) Updating files: 79% (65/82) Updating files: 80% (66/82) Updating files: 81% (67/82) Updating files: 82% (68/82) Updating files: 84% (69/82) Updating files: 85% (70/82) Updating files: 86% (71/82) Updating files: 87% (72/82) Updating files: 89% (73/82) Updating files: 90% (74/82) Updating files: 91% (75/82) Updating files: 92% (76/82) Updating files: 93% (77/82) Updating files: 95% (78/82) Updating files: 96% (79/82) Updating files: 97% (80/82) Updating files: 98% (81/82) Updating files: 100% (82/82) Updating files: 100% (82/82), done. 2026-09-10 12:42:48,682 [ scc.git] DEBUG Updating 9cc36cde..3195c3df 2026-09-10 12:42:49,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/704 HTTP/1.1" 200 None 2026-09-10 12:42:50,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/703 HTTP/1.1" 200 None 2026-09-10 12:42:50,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/700 HTTP/1.1" 200 None 2026-09-10 12:42:51,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/692 HTTP/1.1" 200 None 2026-09-10 12:42:52,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/701 HTTP/1.1" 200 None 2026-09-10 12:42:53,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/698 HTTP/1.1" 200 None 2026-09-10 12:42:54,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/697 HTTP/1.1" 200 None 2026-09-10 12:42:54,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/695 HTTP/1.1" 200 None 2026-09-10 12:42:55,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/693 HTTP/1.1" 200 None 2026-09-10 12:42:56,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/691 HTTP/1.1" 200 None 2026-09-10 12:42:57,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/686 HTTP/1.1" 200 None 2026-09-10 12:42:58,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/690 HTTP/1.1" 200 None 2026-09-10 12:42:58,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/681 HTTP/1.1" 200 None 2026-09-10 12:42:59,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/688 HTTP/1.1" 200 None 2026-09-10 12:43:00,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/685 HTTP/1.1" 200 None 2026-09-10 12:43:01,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/683 HTTP/1.1" 200 None 2026-09-10 12:43:02,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/680 HTTP/1.1" 200 None 2026-09-10 12:43:03,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/684 HTTP/1.1" 200 None 2026-09-10 12:43:04,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/682 HTTP/1.1" 200 None 2026-09-10 12:43:05,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/679 HTTP/1.1" 200 None 2026-09-10 12:43:05,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/677 HTTP/1.1" 200 None 2026-09-10 12:43:06,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/666 HTTP/1.1" 200 None 2026-09-10 12:43:07,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/676 HTTP/1.1" 200 None 2026-09-10 12:43:08,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/669 HTTP/1.1" 200 None 2026-09-10 12:43:09,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/662 HTTP/1.1" 200 None 2026-09-10 12:43:10,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/663 HTTP/1.1" 200 None 2026-09-10 12:43:11,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-09-10 12:43:12,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-09-10 12:43:13,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-09-10 12:43:14,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-09-10 12:43:15,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-09-10 12:43:15,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-09-10 12:43:17,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-09-10 12:43:18,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-09-10 12:43:19,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-09-10 12:43:20,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-09-10 12:43:21,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-09-10 12:43:22,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-09-10 12:43:23,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-09-10 12:43:24,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-09-10 12:43:25,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-09-10 12:43:26,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-09-10 12:43:27,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-09-10 12:43:28,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-09-10 12:43:28,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-09-10 12:43:29,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-09-10 12:43:30,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-09-10 12:43:31,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-09-10 12:43:32,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-09-10 12:43:33,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-09-10 12:43:34,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-09-10 12:43:35,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-09-10 12:43:37,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-09-10 12:43:38,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-09-10 12:43:38,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-09-10 12:43:39,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-09-10 12:43:40,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-09-10 12:43:41,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-09-10 12:43:41,609 [ scc.git] DEBUG Calling 'git fetch origin pull/706/head' 2026-09-10 12:43:43,607 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-09-10 12:43:43,607 [ scc.git] DEBUG * branch refs/pull/706/head -> FETCH_HEAD 2026-09-10 12:43:43,652 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:43:43,652 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:43:43,652 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:43:43,671 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b5991992467c0abe6a61ce59bbdb9686129e93d2' 2026-09-10 12:43:43,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:43:43,927 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 706 (Figure repo migration) b5991992467c0abe6a61ce59bbdb9686129e93d2' 2026-09-10 12:43:44,931 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:43:45,148 [ scc.git] DEBUG .bumpversion.cfg | 4 +- 2026-09-10 12:43:45,148 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 + 2026-09-10 12:43:45,148 [ scc.git] DEBUG .github/workflows/pages.yml | 28 - 2026-09-10 12:43:45,148 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 + 2026-09-10 12:43:45,148 [ scc.git] DEBUG .gitignore | 4 +- 2026-09-10 12:43:45,148 [ scc.git] DEBUG .gitmodules | 3 + 2026-09-10 12:43:45,148 [ scc.git] DEBUG .omeroci/app-srv | 4 +- 2026-09-10 12:43:45,148 [ scc.git] DEBUG README.rst | 51 +- 2026-09-10 12:43:45,148 [ scc.git] DEBUG deploy_build.sh | 21 +- 2026-09-10 12:43:45,148 [ scc.git] DEBUG deploy_ghpages.sh | 1 + 2026-09-10 12:43:45,148 [ scc.git] DEBUG figure | 1 + 2026-09-10 12:43:45,148 [ scc.git] DEBUG omero_figure/cli.py | 2 +- 2026-09-10 12:43:45,148 [ scc.git] DEBUG omero_figure/scripts/__init__.py | 0 2026-09-10 12:43:45,148 [ scc.git] DEBUG omero_figure/scripts/omero/__init__.py | 0 2026-09-10 12:43:45,148 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 3562 -------------------- 2026-09-10 12:43:45,148 [ scc.git] DEBUG .../scripts/omero/figure_scripts/__init__.py | 0 2026-09-10 12:43:45,148 [ scc.git] DEBUG .../scripts/omero/figure_scripts/pilfonts/B24.pbm | Bin 8441 -> 0 bytes 2026-09-10 12:43:45,148 [ scc.git] DEBUG .../scripts/omero/figure_scripts/pilfonts/B24.pil | Bin 5143 -> 0 bytes 2026-09-10 12:43:45,148 [ scc.git] DEBUG .../omero/figure_scripts/pilfonts/FreeSans.ttf | Bin 568896 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG .../omero/figure_scripts/pilfonts/FreeSansBold.ttf | Bin 359272 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG .../pilfonts/FreeSansBoldOblique.ttf | Bin 301188 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG .../figure_scripts/pilfonts/FreeSansOblique.ttf | Bin 441432 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG omero_figure/views.py | 49 +- 2026-09-10 12:43:45,149 [ scc.git] DEBUG package-lock.json | 1499 -------- 2026-09-10 12:43:45,149 [ scc.git] DEBUG package.json | 51 - 2026-09-10 12:43:45,149 [ scc.git] DEBUG setup.py | 8 + 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/css/figure.css | 1551 --------- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/html/dialogs/scriptManagerDialog.html | 86 - 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/arrow-icon-16.png | Bin 2878 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/button-down-grey.png | Bin 3274 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/button-down.png | Bin 1879 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/button-flat.png | Bin 2827 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/button-up.png | Bin 2111 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/crop20.png | Bin 3022 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/cursor-icon-16.png | Bin 245 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/ellipse-icon-16.png | Bin 3020 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/gradient.png | Bin 3405 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/hue.png | Bin 2837 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/line-icon-16.png | Bin 2865 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/luts_10.png | Bin 18556 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/markdown_dark32x20.png | Bin 3116 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/markdown_light32x20.png | Bin 3089 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 2477 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/polygon-icon-16.png | Bin 2880 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/polyline-icon-16.png | Bin 2874 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/projection20.png | Bin 3585 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/square-outline-icon-16.png | Bin 96 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 2477 -> 0 bytes 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/index.html | 1986 ----------- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/main.js | 189 -- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/models/figure_model.js | 1398 -------- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/models/panel_model.js | 1577 --------- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/models/roi_model.js | 149 - 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/models/undo.js | 282 -- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/models/zarr_utils.js | 483 --- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/shapeEditorTest.js | 454 --- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 604 ---- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/shape_editor/line.js | 612 ---- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/shape_editor/point.js | 527 --- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 462 --- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/shape_editor/rect.js | 618 ---- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 992 ------ 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/shape_editor/text.js | 564 ---- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/backbone.mousetrap.js | 69 - 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 450 --- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/chgrp_modal_view.js | 143 - 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/colorbar_form_view.js | 124 - 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/colorpicker.js | 143 - 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/crop_modal_view.js | 660 ---- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/figure_view.js | 1125 ------- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/files.js | 374 -- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/info_panel_view.js | 293 -- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/label_suggestions.js | 753 ----- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/labels_from_maps_modal.js | 197 -- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/legend_view.js | 174 - 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/lutpicker.js | 181 - 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/modal_views.js | 536 --- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/open_local_file_modal.js | 77 - 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/panel_view.js | 501 --- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/raphael-rect.js | 291 -- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/right_panel_view.js | 1572 --------- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 250 -- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 645 ---- 2026-09-10 12:43:45,149 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 230 -- 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src/templates/viewport_inner.template.html 2026-09-10 12:43:45,199 [ scc.git] DEBUG delete mode 100644 src/templates/xywh_panel.template.html 2026-09-10 12:43:45,199 [ scc.git] DEBUG delete mode 100644 src/templates/zoom_crop.template.html 2026-09-10 12:43:45,199 [ scc.git] DEBUG delete mode 100644 src/test.html 2026-09-10 12:43:45,199 [ scc.git] DEBUG delete mode 100755 vite.config.js 2026-09-10 12:43:45,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:43:45,412 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:43:45,673 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:43:45,673 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:43:45,697 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:43:45,880 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:43:46,046 [ scc.git] DEBUG has no local changes 2026-09-10 12:43:46,046 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Updating 9cc36cde..3195c3df Previously merged: - PR 704 jburel 'Revert commit 49ae9c9' - PR 703 will-moore 'Readme remove rc' - PR 700 will-moore 'Fix parentheses in zoom level for loop for export script' - PR 692 will-moore 'colorbar lut background fix' - PR 701 will-moore 'bump nanoid to 3.3.18 with 'npm audit fix'' - PR 698 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.13' - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 706 will-moore 'Figure repo migration' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:43:46,312 [ scc.git] DEBUG [detached HEAD da8d4bff] merge master -Dorg -Ssuccess-only 2026-09-10 12:43:46,319 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:43:46,320 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:43:46,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-09-10 12:43:47,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-09-10 12:43:47,219 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:43:47,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-09-10 12:43:48,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:43:49,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:43:49,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-09-10 12:43:50,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:43:50,068 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:43:50,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-09-10 12:43:51,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-09-10 12:43:51,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-09-10 12:43:52,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:43:52,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-09-10 12:43:53,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:43:53,280 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-09-10 12:43:53,280 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:43:53,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-09-10 12:43:53,281 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:43:53,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:43:53,307 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:43:53,342 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:43:53,342 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:43:53,368 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:43:53,448 [ scc.git] DEBUG Already up to date. 2026-09-10 12:43:53,449 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-09-10 12:43:54,055 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-09-10 12:43:54,055 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-09-10 12:43:54,100 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-09-10 12:43:54,613 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-09-10 12:43:54,613 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-09-10 12:43:54,656 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:43:54,656 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:43:54,656 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:43:54,678 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-09-10 12:43:54,729 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:43:54,751 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-09-10 12:43:55,008 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-09-10 12:43:55,112 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:43:55,210 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-09-10 12:43:55,210 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-09-10 12:43:55,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:43:55,411 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-09-10 12:43:55,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:43:55,478 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-09-10 12:43:55,752 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:43:55,853 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-10 12:43:55,853 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-10 12:43:56,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:43:56,063 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:43:56,282 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:43:56,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:43:56,310 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:43:56,512 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:43:56,634 [ scc.git] DEBUG has no local changes 2026-09-10 12:43:56,634 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:43:56,840 [ scc.git] DEBUG [detached HEAD 7104661] merge master -Dorg -Ssuccess-only 2026-09-10 12:43:56,842 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:43:56,842 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:43:57,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-09-10 12:43:57,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-09-10 12:43:58,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-09-10 12:43:58,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-09-10 12:43:58,747 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:43:59,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-09-10 12:43:59,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:44:00,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:00,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:44:00,965 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-09-10 12:44:01,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-09-10 12:44:02,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-09-10 12:44:02,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-09-10 12:44:02,683 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:44:03,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:03,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:44:04,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:04,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:44:04,870 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-09-10 12:44:05,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-09-10 12:44:05,397 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:44:06,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:06,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:44:07,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:07,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:44:07,598 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-09-10 12:44:08,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-09-10 12:44:08,197 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:44:08,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:09,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:44:09,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:10,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:44:10,321 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-09-10 12:44:10,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-09-10 12:44:11,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-09-10 12:44:11,433 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:44:12,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:12,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:44:13,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:13,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:44:13,606 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-09-10 12:44:14,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-09-10 12:44:14,124 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:44:14,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:15,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:44:15,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:16,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:44:16,299 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-09-10 12:44:16,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-09-10 12:44:16,818 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:44:17,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:17,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:44:18,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:19,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:44:19,054 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-09-10 12:44:19,054 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:44:19,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-09-10 12:44:19,056 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:44:19,056 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:44:19,083 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:44:19,109 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:44:19,110 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:44:19,139 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:44:19,229 [ scc.git] DEBUG Already up to date. 2026-09-10 12:44:19,229 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-09-10 12:44:19,738 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-09-10 12:44:19,738 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-09-10 12:44:19,776 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-09-10 12:44:20,267 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-09-10 12:44:20,267 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-09-10 12:44:20,303 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-09-10 12:44:20,863 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-09-10 12:44:20,863 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-09-10 12:44:20,895 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-09-10 12:44:21,408 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-09-10 12:44:21,408 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-09-10 12:44:21,443 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-09-10 12:44:21,990 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-09-10 12:44:21,990 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-09-10 12:44:22,022 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-09-10 12:44:22,530 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-09-10 12:44:22,530 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-09-10 12:44:22,571 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-09-10 12:44:23,070 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-09-10 12:44:23,070 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-09-10 12:44:23,214 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:44:23,214 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:44:23,214 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:44:23,247 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-09-10 12:44:23,277 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:44:23,300 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-09-10 12:44:23,637 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:44:23,757 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-09-10 12:44:23,757 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-09-10 12:44:23,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:44:23,973 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-09-10 12:44:24,019 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:44:24,039 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-09-10 12:44:24,276 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-10 12:44:24,393 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:44:24,484 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-09-10 12:44:24,484 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-09-10 12:44:24,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:44:24,703 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-09-10 12:44:24,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:44:24,772 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-09-10 12:44:25,101 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-10 12:44:25,101 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-09-10 12:44:25,138 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-10 12:44:25,140 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-10 12:44:25,199 [ scc.git] DEBUG Calling 'git reset --hard 317da3f55f6e396f2f6dc72c98ddd0c69188ccca' 2026-09-10 12:44:25,677 [ scc.git] DEBUG HEAD is now at 317da3f merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-09-10 12:44:25,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:44:25,871 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-09-10 12:44:25,904 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-09-10 12:44:25,933 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-09-10 12:44:25,958 [ scc.config] DEBUG Found github.token 2026-09-10 12:44:25,958 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-09-10 12:44:25,958 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-09-10 12:44:26,019 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:44:26,043 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-09-10 12:44:26,318 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-10 12:44:26,422 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:44:26,517 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-09-10 12:44:26,517 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-09-10 12:44:26,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:44:26,725 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-09-10 12:44:26,768 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:44:26,788 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-09-10 12:44:27,031 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-10 12:44:27,148 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:44:27,257 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-09-10 12:44:27,257 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-09-10 12:44:27,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:44:27,445 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-09-10 12:44:27,731 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:44:27,754 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-09-10 12:44:28,063 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-10 12:44:28,063 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-09-10 12:44:28,110 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-10 12:44:28,113 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-10 12:44:28,181 [ scc.git] DEBUG Calling 'git reset --hard 272c47ac0a7fa5ff00c788c0f7dd8aa0ec4201b9' 2026-09-10 12:44:28,440 [ scc.git] DEBUG HEAD is now at 272c47a merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-09-10 12:44:28,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:44:28,651 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-09-10 12:44:28,693 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-09-10 12:44:28,725 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-09-10 12:44:28,744 [ scc.config] DEBUG Found github.token 2026-09-10 12:44:28,744 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-09-10 12:44:28,744 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-09-10 12:44:28,796 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:44:28,817 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-09-10 12:44:29,133 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-10 12:44:29,133 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-09-10 12:44:29,164 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-10 12:44:29,165 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-10 12:44:29,216 [ scc.git] DEBUG Calling 'git reset --hard 272c47ac0a7fa5ff00c788c0f7dd8aa0ec4201b9' 2026-09-10 12:44:29,432 [ scc.git] DEBUG HEAD is now at 272c47a merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-09-10 12:44:29,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:44:29,676 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-09-10 12:44:29,711 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-09-10 12:44:29,740 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-09-10 12:44:29,766 [ scc.config] DEBUG Found github.token 2026-09-10 12:44:29,766 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-09-10 12:44:29,766 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:44:30,032 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:44:30,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:44:30,053 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:44:30,285 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:44:30,432 [ scc.git] DEBUG has no local changes 2026-09-10 12:44:30,433 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:44:30,709 [ scc.git] DEBUG [detached HEAD 4ab417a] merge master -Dorg -Ssuccess-only 2026-09-10 12:44:30,711 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:44:30,712 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:44:31,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-09-10 12:44:31,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/566 HTTP/1.1" 200 None 2026-09-10 12:44:31,629 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:44:32,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a0f64fab8b6ff36d8cc38e97fee618e2cd043626?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:33,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a0f64fab8b6ff36d8cc38e97fee618e2cd043626/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:44:33,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a0f64fab8b6ff36d8cc38e97fee618e2cd043626/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:44:34,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a0f64fab8b6ff36d8cc38e97fee618e2cd043626?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:34,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/a0f64fab8b6ff36d8cc38e97fee618e2cd043626?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:44:34,694 [ scc.repo] DEBUG - PR 566 dependabot[bot] 'Bump js-yaml from 4.1.0 to 4.3.2' 2026-09-10 12:44:35,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/565 HTTP/1.1" 200 None 2026-09-10 12:44:35,244 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:44:35,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/5bf4a3df9d457e59731fdbcc113c1da254f5d4f0?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:36,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/5bf4a3df9d457e59731fdbcc113c1da254f5d4f0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:44:37,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/5bf4a3df9d457e59731fdbcc113c1da254f5d4f0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:44:37,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/5bf4a3df9d457e59731fdbcc113c1da254f5d4f0?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:38,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/5bf4a3df9d457e59731fdbcc113c1da254f5d4f0?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:44:38,028 [ scc.repo] DEBUG - PR 565 dependabot[bot] 'Bump qs and body-parser' 2026-09-10 12:44:38,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/564 HTTP/1.1" 200 None 2026-09-10 12:44:38,585 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:44:39,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/bce482eff7b13b8edfef15f2a68f00129c6a707f?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:39,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/bce482eff7b13b8edfef15f2a68f00129c6a707f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:44:40,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/bce482eff7b13b8edfef15f2a68f00129c6a707f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:44:41,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/bce482eff7b13b8edfef15f2a68f00129c6a707f?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:41,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/bce482eff7b13b8edfef15f2a68f00129c6a707f?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:44:41,512 [ scc.repo] DEBUG - PR 564 dependabot[bot] 'Bump fast-uri from 3.1.5 to 3.1.7' 2026-09-10 12:44:42,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532 HTTP/1.1" 200 None 2026-09-10 12:44:42,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532/comments HTTP/1.1" 200 None 2026-09-10 12:44:43,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:43,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:44:44,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:44:44,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:45,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:44:45,314 [ scc.repo] DEBUG - PR 532 will-moore 'Zarr layers' 2026-09-10 12:44:45,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-09-10 12:44:46,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-09-10 12:44:46,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:47,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:44:47,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-09-10 12:44:48,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:44:48,436 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-09-10 12:44:48,437 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:44:48,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-09-10 12:44:48,438 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:44:48,438 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:44:48,470 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:44:48,508 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:44:48,508 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:44:48,653 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:44:49,768 [ scc.git] DEBUG Updating 7a798cee..6c554250 2026-09-10 12:44:50,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/562 HTTP/1.1" 200 None 2026-09-10 12:44:51,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/563 HTTP/1.1" 200 None 2026-09-10 12:44:52,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/559 HTTP/1.1" 200 None 2026-09-10 12:44:52,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/558 HTTP/1.1" 200 None 2026-09-10 12:44:53,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/557 HTTP/1.1" 200 None 2026-09-10 12:44:54,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/541 HTTP/1.1" 200 None 2026-09-10 12:44:55,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/556 HTTP/1.1" 200 None 2026-09-10 12:44:55,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/554 HTTP/1.1" 200 None 2026-09-10 12:44:56,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/553 HTTP/1.1" 200 None 2026-09-10 12:44:57,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/552 HTTP/1.1" 200 None 2026-09-10 12:44:58,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/551 HTTP/1.1" 200 None 2026-09-10 12:44:59,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/550 HTTP/1.1" 200 None 2026-09-10 12:45:00,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/549 HTTP/1.1" 200 None 2026-09-10 12:45:00,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/548 HTTP/1.1" 200 None 2026-09-10 12:45:01,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/547 HTTP/1.1" 200 None 2026-09-10 12:45:02,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/540 HTTP/1.1" 200 None 2026-09-10 12:45:03,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/539 HTTP/1.1" 200 None 2026-09-10 12:45:03,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/537 HTTP/1.1" 200 None 2026-09-10 12:45:04,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/535 HTTP/1.1" 200 None 2026-09-10 12:45:05,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/527 HTTP/1.1" 200 None 2026-09-10 12:45:06,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/534 HTTP/1.1" 200 None 2026-09-10 12:45:07,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/533 HTTP/1.1" 200 None 2026-09-10 12:45:08,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/530 HTTP/1.1" 200 None 2026-09-10 12:45:08,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/528 HTTP/1.1" 200 None 2026-09-10 12:45:09,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/529 HTTP/1.1" 200 None 2026-09-10 12:45:10,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/526 HTTP/1.1" 200 None 2026-09-10 12:45:11,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/525 HTTP/1.1" 200 None 2026-09-10 12:45:12,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/524 HTTP/1.1" 200 None 2026-09-10 12:45:13,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/523 HTTP/1.1" 200 None 2026-09-10 12:45:13,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/522 HTTP/1.1" 200 None 2026-09-10 12:45:14,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/521 HTTP/1.1" 200 None 2026-09-10 12:45:15,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/520 HTTP/1.1" 200 None 2026-09-10 12:45:16,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/519 HTTP/1.1" 200 None 2026-09-10 12:45:17,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/518 HTTP/1.1" 200 None 2026-09-10 12:45:17,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/514 HTTP/1.1" 200 None 2026-09-10 12:45:18,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/513 HTTP/1.1" 200 None 2026-09-10 12:45:19,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/512 HTTP/1.1" 200 None 2026-09-10 12:45:20,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/465 HTTP/1.1" 200 None 2026-09-10 12:45:21,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/517 HTTP/1.1" 200 None 2026-09-10 12:45:22,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/516 HTTP/1.1" 200 None 2026-09-10 12:45:23,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-09-10 12:45:24,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-09-10 12:45:24,154 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-09-10 12:45:25,067 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-09-10 12:45:25,067 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-09-10 12:45:25,103 [ scc.git] DEBUG Calling 'git fetch origin pull/532/head' 2026-09-10 12:45:25,813 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-09-10 12:45:25,813 [ scc.git] DEBUG * branch refs/pull/532/head -> FETCH_HEAD 2026-09-10 12:45:25,847 [ scc.git] DEBUG Calling 'git fetch origin pull/564/head' 2026-09-10 12:45:26,499 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-09-10 12:45:26,499 [ scc.git] DEBUG * branch refs/pull/564/head -> FETCH_HEAD 2026-09-10 12:45:26,537 [ scc.git] DEBUG Calling 'git fetch origin pull/565/head' 2026-09-10 12:45:27,290 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-09-10 12:45:27,290 [ scc.git] DEBUG * branch refs/pull/565/head -> FETCH_HEAD 2026-09-10 12:45:27,326 [ scc.git] DEBUG Calling 'git fetch origin pull/566/head' 2026-09-10 12:45:27,984 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-09-10 12:45:27,984 [ scc.git] DEBUG * branch refs/pull/566/head -> FETCH_HEAD 2026-09-10 12:45:28,028 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:45:28,028 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:45:28,028 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:45:28,049 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-09-10 12:45:28,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:45:28,175 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-09-10 12:45:28,579 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-09-10 12:45:28,672 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:45:28,766 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-09-10 12:45:28,766 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-09-10 12:45:28,766 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-09-10 12:45:28,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:45:28,967 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-09-10 12:45:29,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:45:29,086 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 532 (Zarr layers) fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-09-10 12:45:30,067 [ scc.git] DEBUG Auto-merging css/app.css 2026-09-10 12:45:30,067 [ scc.git] DEBUG CONFLICT (content): Merge conflict in css/app.css 2026-09-10 12:45:30,067 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-10 12:45:30,067 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-09-10 12:45:30,067 [ scc.git] DEBUG Auto-merging package.json 2026-09-10 12:45:30,067 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-09-10 12:45:30,067 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-09-10 12:45:30,067 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-09-10 12:45:30,067 [ scc.git] DEBUG Auto-merging src/viewers/viewer/source/Image.js 2026-09-10 12:45:30,067 [ scc.git] DEBUG Auto-merging webpack.dev.config.js 2026-09-10 12:45:30,101 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-10 12:45:30,106 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-10 12:45:30,224 [ scc.git] DEBUG Calling 'git reset --hard fc52f1b6fd539a4fa6f61e6d0de243f56f88b74b' 2026-09-10 12:45:30,832 [ scc.git] DEBUG HEAD is now at fc52f1b6 merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 2026-09-10 12:45:31,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:45:31,046 [ scc.git] DEBUG Calling 'git merge-base 6c554250ea1528ff339ac06c3fe1e0621fe48576 fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-09-10 12:45:31,129 [ scc.git] DEBUG Calling 'git diff --name-only 0b7eaf71f7e3f5c7289fab4bf857094bdadce1e4..6c554250ea1528ff339ac06c3fe1e0621fe48576' 2026-09-10 12:45:31,185 [ scc.git] INFO - PR 532 will-moore 'Zarr layers' Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details. Possible conflicts: - Upstream changes - package-lock.json - css/app.css --conflicts 2026-09-10 12:45:31,201 [ scc.config] DEBUG Found github.token 2026-09-10 12:45:31,201 [ scc.git] DEBUG Not adding comment to issue #532, already --conflicts. 2026-09-10 12:45:31,202 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bce482eff7b13b8edfef15f2a68f00129c6a707f' 2026-09-10 12:45:31,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:45:31,327 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 564 (Bump fast-uri from 3.1.5 to 3.1.7) bce482eff7b13b8edfef15f2a68f00129c6a707f' 2026-09-10 12:45:31,752 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:45:31,854 [ scc.git] DEBUG package-lock.json | 15 ++++++++------- 2026-09-10 12:45:31,854 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 7 deletions(-) 2026-09-10 12:45:32,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:45:32,061 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5bf4a3df9d457e59731fdbcc113c1da254f5d4f0' 2026-09-10 12:45:32,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:45:32,207 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 565 (Bump qs and body-parser) 5bf4a3df9d457e59731fdbcc113c1da254f5d4f0' 2026-09-10 12:45:32,576 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-10 12:45:32,689 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:45:32,835 [ scc.git] DEBUG package-lock.json | 96 +++++++++++++++++++++++++++++++++---------------------- 2026-09-10 12:45:32,835 [ scc.git] DEBUG 1 file changed, 58 insertions(+), 38 deletions(-) 2026-09-10 12:45:33,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:45:33,044 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a0f64fab8b6ff36d8cc38e97fee618e2cd043626' 2026-09-10 12:45:33,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:45:33,226 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 566 (Bump js-yaml from 4.1.0 to 4.3.2) a0f64fab8b6ff36d8cc38e97fee618e2cd043626' 2026-09-10 12:45:33,667 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-10 12:45:33,781 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:45:33,899 [ scc.git] DEBUG package-lock.json | 70 ++++++++++++++++++++++++++++++++----------------------- 2026-09-10 12:45:33,899 [ scc.git] DEBUG 1 file changed, 41 insertions(+), 29 deletions(-) 2026-09-10 12:45:34,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:45:34,106 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:45:34,288 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:45:34,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:45:34,316 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:45:34,503 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:45:34,686 [ scc.git] DEBUG has no local changes 2026-09-10 12:45:34,686 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..6c554250 Previously merged: - PR 562 will-moore 'Keyboard select roi' - PR 563 will-moore 'Use POST data for imgRdef save' - PR 559 dependabot[bot] 'Bump js-yaml and mocha' - PR 558 dependabot[bot] 'Bump fast-uri from 3.1.4 to 3.1.5' - PR 557 dependabot[bot] 'Bump socket.io-parser from 4.2.6 to 4.2.7' - PR 541 will-moore 'Only add channel to tile request string if active' - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 564 dependabot[bot] 'Bump fast-uri from 3.1.5 to 3.1.7' - PR 565 dependabot[bot] 'Bump qs and body-parser' - PR 566 dependabot[bot] 'Bump js-yaml from 4.1.0 to 4.3.2' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:45:34,944 [ scc.git] DEBUG [detached HEAD 57fe70fe] merge master -Dorg -Ssuccess-only 2026-09-10 12:45:34,949 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:45:34,949 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:45:35,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-09-10 12:45:35,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/98 HTTP/1.1" 200 None 2026-09-10 12:45:36,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/98/comments HTTP/1.1" 200 None 2026-09-10 12:45:36,462 [ scc.repo] DEBUG # ... Include label: include 2026-09-10 12:45:37,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1fa070ad0afa0f3944fa2513d38db6da1f5bc783?page=1 HTTP/1.1" 200 None 2026-09-10 12:45:37,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1fa070ad0afa0f3944fa2513d38db6da1f5bc783/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:45:38,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1fa070ad0afa0f3944fa2513d38db6da1f5bc783?page=1 HTTP/1.1" 200 None 2026-09-10 12:45:38,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1fa070ad0afa0f3944fa2513d38db6da1f5bc783?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:45:38,611 [ scc.repo] DEBUG - PR 98 JoshuaFortriede 'use namespace with keys' 2026-09-10 12:45:39,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/97 HTTP/1.1" 200 None 2026-09-10 12:45:39,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/97/comments HTTP/1.1" 200 None 2026-09-10 12:45:39,715 [ scc.repo] DEBUG # ... Include label: include 2026-09-10 12:45:40,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/3854f1cfa0cbe79675dad16ad34fce109524eb28?page=1 HTTP/1.1" 200 None 2026-09-10 12:45:40,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/3854f1cfa0cbe79675dad16ad34fce109524eb28/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:45:41,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/3854f1cfa0cbe79675dad16ad34fce109524eb28?page=1 HTTP/1.1" 200 None 2026-09-10 12:45:41,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/3854f1cfa0cbe79675dad16ad34fce109524eb28?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:45:41,755 [ scc.repo] DEBUG - PR 97 JoshuaFortriede 'BUG Fix: use HTML value to replace HTML' 2026-09-10 12:45:42,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-09-10 12:45:42,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-09-10 12:45:42,825 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:45:43,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-09-10 12:45:43,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:45:44,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:45:45,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-09-10 12:45:45,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:45:45,532 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:45:46,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-09-10 12:45:46,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-09-10 12:45:47,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:45:47,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-09-10 12:45:48,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:45:48,197 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-09-10 12:45:48,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-09-10 12:45:49,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-09-10 12:45:49,278 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:45:49,278 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-09-10 12:45:49,279 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:45:49,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:45:49,326 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:45:49,358 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:45:49,358 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:45:49,389 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:45:49,481 [ scc.git] DEBUG Already up to date. 2026-09-10 12:45:49,481 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-09-10 12:45:50,096 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-09-10 12:45:50,096 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-09-10 12:45:50,128 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-09-10 12:45:50,613 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-09-10 12:45:50,613 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-09-10 12:45:50,646 [ scc.git] DEBUG Calling 'git fetch origin pull/97/head' 2026-09-10 12:45:51,312 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-09-10 12:45:51,312 [ scc.git] DEBUG * branch refs/pull/97/head -> FETCH_HEAD 2026-09-10 12:45:51,343 [ scc.git] DEBUG Calling 'git fetch origin pull/98/head' 2026-09-10 12:45:51,960 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-09-10 12:45:51,960 [ scc.git] DEBUG * branch refs/pull/98/head -> FETCH_HEAD 2026-09-10 12:45:51,991 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:45:51,991 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:45:51,991 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:45:52,010 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-09-10 12:45:52,050 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:45:52,073 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-09-10 12:45:52,370 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:45:52,467 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-10 12:45:52,468 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-10 12:45:52,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:45:52,658 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-09-10 12:45:52,700 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:45:52,719 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-09-10 12:45:52,959 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-09-10 12:45:52,959 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-09-10 12:45:52,997 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-10 12:45:53,000 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-10 12:45:53,053 [ scc.git] DEBUG Calling 'git reset --hard 071f6c47c9b2a0a862c258ce37988b52c5cd1504' 2026-09-10 12:45:53,293 [ scc.git] DEBUG HEAD is now at 071f6c4 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-09-10 12:45:53,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:45:53,516 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-09-10 12:45:53,557 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-09-10 12:45:53,587 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-09-10 12:45:53,606 [ scc.config] DEBUG Found github.token 2026-09-10 12:45:53,606 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-09-10 12:45:53,606 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3854f1cfa0cbe79675dad16ad34fce109524eb28' 2026-09-10 12:45:53,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:45:53,672 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 97 (BUG Fix: use HTML value to replace HTML) 3854f1cfa0cbe79675dad16ad34fce109524eb28' 2026-09-10 12:45:53,956 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:45:54,068 [ scc.git] DEBUG .../templates/webclient/data/includes/right_plugin.general.js.html | 4 +++- 2026-09-10 12:45:54,068 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 1 deletion(-) 2026-09-10 12:45:54,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:45:54,278 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fa070ad0afa0f3944fa2513d38db6da1f5bc783' 2026-09-10 12:45:54,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:45:54,359 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 98 (use namespace with keys) 1fa070ad0afa0f3944fa2513d38db6da1f5bc783' 2026-09-10 12:45:54,667 [ scc.git] DEBUG Auto-merging omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-09-10 12:45:54,783 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:45:54,935 [ scc.git] DEBUG .../webclient/data/includes/right_plugin.general.js.html | 11 ++++++++--- 2026-09-10 12:45:54,935 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 3 deletions(-) 2026-09-10 12:45:55,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:45:55,141 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:45:55,352 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:45:55,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:45:55,372 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:45:55,550 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:45:55,652 [ scc.git] DEBUG has no local changes 2026-09-10 12:45:55,652 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) - PR 74 will-moore 'mapr extension of webclient' (exclude comment) Already up to date. Merged PRs: - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - PR 97 JoshuaFortriede 'BUG Fix: use HTML value to replace HTML' - PR 98 JoshuaFortriede 'use namespace with keys' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:45:55,863 [ scc.git] DEBUG [detached HEAD 3e7a209] merge master -Dorg -Ssuccess-only 2026-09-10 12:45:55,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:45:55,866 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:45:56,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-09-10 12:45:56,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-09-10 12:45:57,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-09-10 12:45:58,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-09-10 12:45:58,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:45:59,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-09-10 12:45:59,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:45:59,511 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-09-10 12:46:00,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-09-10 12:46:00,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-09-10 12:46:01,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:01,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:46:02,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:02,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:46:02,798 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-09-10 12:46:03,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-09-10 12:46:03,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-09-10 12:46:04,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:04,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:46:05,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:05,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:46:05,978 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-09-10 12:46:05,978 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:46:05,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-09-10 12:46:05,979 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:46:05,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:06,006 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:46:06,035 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:46:06,035 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:46:06,082 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:46:06,465 [ scc.git] DEBUG Updating 3cd120c..6a653e4 2026-09-10 12:46:07,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/95 HTTP/1.1" 200 None 2026-09-10 12:46:07,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/94 HTTP/1.1" 200 None 2026-09-10 12:46:08,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-09-10 12:46:08,793 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-09-10 12:46:09,652 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-09-10 12:46:09,652 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-09-10 12:46:09,682 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-09-10 12:46:10,739 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-09-10 12:46:10,739 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-09-10 12:46:10,769 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-09-10 12:46:11,338 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-09-10 12:46:11,339 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-09-10 12:46:11,372 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:46:11,372 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:46:11,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:11,393 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-09-10 12:46:11,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:11,481 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-09-10 12:46:11,730 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-09-10 12:46:11,730 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-09-10 12:46:11,730 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-09-10 12:46:11,730 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-09-10 12:46:11,762 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-10 12:46:11,764 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-10 12:46:11,796 [ scc.git] DEBUG Calling 'git reset --hard 6a653e49e3589ccb463166506896639f6f0a5a2b' 2026-09-10 12:46:11,984 [ scc.git] DEBUG HEAD is now at 6a653e4 Fix workflow permission indentation 2026-09-10 12:46:12,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:46:12,178 [ scc.git] DEBUG Calling 'git merge-base 6a653e49e3589ccb463166506896639f6f0a5a2b 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-09-10 12:46:12,276 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..6a653e49e3589ccb463166506896639f6f0a5a2b' 2026-09-10 12:46:12,314 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2026-09-10 12:46:12,336 [ scc.config] DEBUG Found github.token 2026-09-10 12:46:12,336 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-09-10 12:46:12,336 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-09-10 12:46:12,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:12,456 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-09-10 12:46:12,811 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-09-10 12:46:12,811 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-09-10 12:46:12,811 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-09-10 12:46:12,842 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-10 12:46:12,844 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-10 12:46:12,888 [ scc.git] DEBUG Calling 'git reset --hard 6a653e49e3589ccb463166506896639f6f0a5a2b' 2026-09-10 12:46:13,083 [ scc.git] DEBUG HEAD is now at 6a653e4 Fix workflow permission indentation 2026-09-10 12:46:13,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:46:13,293 [ scc.git] DEBUG Calling 'git merge-base 6a653e49e3589ccb463166506896639f6f0a5a2b 78e55539b68e351ed5ef202854718b49a37729a7' 2026-09-10 12:46:13,349 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..6a653e49e3589ccb463166506896639f6f0a5a2b' 2026-09-10 12:46:13,379 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-09-10 12:46:13,393 [ scc.config] DEBUG Found github.token 2026-09-10 12:46:13,393 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-09-10 12:46:13,394 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-09-10 12:46:13,448 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:13,470 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-09-10 12:46:13,757 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:46:13,843 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-09-10 12:46:13,843 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-09-10 12:46:14,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:46:14,092 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:46:14,297 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:46:14,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:14,315 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:46:14,463 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:46:14,540 [ scc.git] DEBUG has no local changes 2026-09-10 12:46:14,540 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..6a653e4 Previously merged: - PR 95 sbesson 'Remove manual CHANGELOG in favor of automated GitHub releases' - PR 94 sbesson 'Cap pandas to 2.x and clean up unused dependencies' - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:46:14,780 [ scc.git] DEBUG [detached HEAD d18988e] merge master -Dorg -Ssuccess-only 2026-09-10 12:46:14,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:46:14,783 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:46:15,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-09-10 12:46:15,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-09-10 12:46:16,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:16,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:46:17,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:17,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:46:17,852 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-09-10 12:46:18,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-09-10 12:46:18,376 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:46:19,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:19,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:46:20,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:20,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:46:20,631 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-09-10 12:46:21,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-09-10 12:46:21,152 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:46:21,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:22,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:46:22,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:23,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:46:23,225 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-09-10 12:46:23,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-09-10 12:46:24,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-09-10 12:46:24,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-09-10 12:46:25,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-09-10 12:46:25,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-09-10 12:46:26,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-09-10 12:46:26,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-09-10 12:46:26,984 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:46:26,984 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-09-10 12:46:26,985 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:46:26,985 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:27,014 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:46:27,043 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:46:27,043 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:46:27,075 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:46:27,150 [ scc.git] DEBUG Already up to date. 2026-09-10 12:46:27,150 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-09-10 12:46:27,652 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-09-10 12:46:27,652 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-09-10 12:46:27,683 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-09-10 12:46:28,187 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-09-10 12:46:28,187 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-09-10 12:46:28,235 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-09-10 12:46:28,752 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-09-10 12:46:28,752 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-09-10 12:46:28,789 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:46:28,789 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:46:28,789 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:28,807 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-09-10 12:46:28,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:28,857 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-09-10 12:46:29,202 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:46:29,290 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-09-10 12:46:29,290 [ scc.git] DEBUG package.json | 2 +- 2026-09-10 12:46:29,290 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-09-10 12:46:29,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:46:29,498 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-09-10 12:46:29,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:29,557 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-09-10 12:46:29,784 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-10 12:46:29,784 [ scc.git] DEBUG Auto-merging package.json 2026-09-10 12:46:29,886 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:46:29,985 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-09-10 12:46:29,986 [ scc.git] DEBUG package.json | 2 +- 2026-09-10 12:46:29,986 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-09-10 12:46:30,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:46:30,191 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-09-10 12:46:30,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:30,261 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-09-10 12:46:30,559 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:46:30,665 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-10 12:46:30,665 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-10 12:46:30,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:46:30,860 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:46:31,060 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:46:31,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:31,077 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:46:31,295 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:46:31,408 [ scc.git] DEBUG has no local changes 2026-09-10 12:46:31,408 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:46:31,694 [ scc.git] DEBUG [detached HEAD fc6dd31] merge master -Dorg -Ssuccess-only 2026-09-10 12:46:31,697 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:46:31,698 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:46:31,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-09-10 12:46:32,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-09-10 12:46:32,560 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:46:33,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:33,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:46:34,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:46:35,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:35,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:46:35,501 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:46:35,501 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:46:35,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-09-10 12:46:35,503 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:46:35,503 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:35,543 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:46:35,572 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:46:35,572 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:46:35,604 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:46:35,686 [ scc.git] DEBUG Already up to date. 2026-09-10 12:46:35,686 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-09-10 12:46:36,213 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-09-10 12:46:36,213 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-09-10 12:46:36,251 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:46:36,251 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:46:36,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:36,272 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-09-10 12:46:36,304 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:36,323 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-09-10 12:46:36,591 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:46:36,711 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-10 12:46:36,712 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-10 12:46:36,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:46:36,900 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:46:37,108 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:46:37,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:37,130 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:46:37,306 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:46:37,386 [ scc.git] DEBUG has no local changes 2026-09-10 12:46:37,386 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:46:37,611 [ scc.git] DEBUG [detached HEAD 9873738] merge master -Dorg -Ssuccess-only 2026-09-10 12:46:37,615 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:46:37,615 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:46:37,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-09-10 12:46:38,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-09-10 12:46:38,557 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:46:38,557 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-09-10 12:46:38,558 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:46:38,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:38,592 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:46:38,625 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:46:38,625 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:46:38,681 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:46:39,022 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-09-10 12:46:39,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-09-10 12:46:41,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-09-10 12:46:41,475 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:46:41,475 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:46:41,475 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:41,503 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:46:41,731 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:46:41,731 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:41,749 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:46:42,008 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:46:42,188 [ scc.git] DEBUG has no local changes 2026-09-10 12:46:42,188 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:46:42,499 [ scc.git] DEBUG [detached HEAD 656028e] merge master -Dorg -Ssuccess-only 2026-09-10 12:46:42,502 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:46:42,502 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:46:42,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-09-10 12:46:43,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-09-10 12:46:43,410 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:46:44,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:44,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:46:45,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:46:45,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:46,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:46:46,234 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:46:46,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-09-10 12:46:47,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-09-10 12:46:47,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:48,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:46:49,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:49,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:46:49,484 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-09-10 12:46:49,484 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:46:49,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-09-10 12:46:49,486 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:46:49,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:49,511 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:46:49,537 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:46:49,537 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:46:49,563 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:46:49,649 [ scc.git] DEBUG Already up to date. 2026-09-10 12:46:49,649 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-09-10 12:46:50,368 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-09-10 12:46:50,368 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-09-10 12:46:50,397 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-09-10 12:46:50,891 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-09-10 12:46:50,891 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-09-10 12:46:50,925 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:46:50,926 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:46:50,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:50,945 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-09-10 12:46:50,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:51,024 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-09-10 12:46:51,406 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-09-10 12:46:51,406 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-09-10 12:46:51,406 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-09-10 12:46:51,406 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-09-10 12:46:51,406 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-09-10 12:46:51,406 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-09-10 12:46:51,406 [ scc.git] DEBUG Auto-merging setup.py 2026-09-10 12:46:51,406 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-09-10 12:46:51,440 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-10 12:46:51,442 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-10 12:46:51,508 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-09-10 12:46:51,795 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-09-10 12:46:51,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:46:51,976 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-09-10 12:46:52,016 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-09-10 12:46:52,049 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/urls.py - setup.py - omero_signup/views.py --conflicts 2026-09-10 12:46:52,069 [ scc.config] DEBUG Found github.token 2026-09-10 12:46:52,069 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-09-10 12:46:52,069 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-09-10 12:46:52,104 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:52,128 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-09-10 12:46:52,409 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:46:52,512 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-10 12:46:52,512 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-10 12:46:52,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:46:52,727 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:46:52,915 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:46:52,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:52,935 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:46:53,166 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:46:53,262 [ scc.git] DEBUG has no local changes 2026-09-10 12:46:53,262 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:46:53,464 [ scc.git] DEBUG [detached HEAD 2f85fb5] merge master -Dorg -Ssuccess-only 2026-09-10 12:46:53,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:46:53,468 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:46:53,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-09-10 12:46:54,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-09-10 12:46:54,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-09-10 12:46:55,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-09-10 12:46:55,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:56,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:46:57,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-09-10 12:46:57,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:46:57,605 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-09-10 12:46:57,605 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:46:57,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-09-10 12:46:57,606 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:46:57,606 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:46:57,625 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:46:57,646 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:46:57,646 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:46:57,666 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:46:57,834 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-09-10 12:46:58,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-09-10 12:46:59,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-09-10 12:46:59,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-09-10 12:46:59,882 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-09-10 12:47:00,493 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-09-10 12:47:00,493 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-09-10 12:47:00,522 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:47:00,522 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:00,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:00,538 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-09-10 12:47:00,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:00,588 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-09-10 12:47:00,798 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-09-10 12:47:00,877 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:47:00,966 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-09-10 12:47:00,966 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-09-10 12:47:00,966 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-09-10 12:47:00,966 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-09-10 12:47:00,966 [ scc.git] DEBUG ms/test | 2 ++ 2026-09-10 12:47:00,966 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-09-10 12:47:00,966 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-09-10 12:47:00,966 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-09-10 12:47:00,966 [ scc.git] DEBUG create mode 100755 ms/test 2026-09-10 12:47:01,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:01,175 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:47:01,428 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:01,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:01,448 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:47:01,630 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:47:01,742 [ scc.git] DEBUG has no local changes 2026-09-10 12:47:01,743 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:47:01,980 [ scc.git] DEBUG [detached HEAD f0b99bd] merge master -Dorg -Ssuccess-only 2026-09-10 12:47:01,982 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:47:01,983 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:47:02,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-09-10 12:47:02,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-09-10 12:47:02,945 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:47:03,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-09-10 12:47:04,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:47:04,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:47:05,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-09-10 12:47:05,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:47:05,837 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:47:05,837 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:47:05,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-09-10 12:47:05,838 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:05,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:05,867 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:47:05,901 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:47:05,901 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:47:05,930 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:47:06,006 [ scc.git] DEBUG Already up to date. 2026-09-10 12:47:06,006 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-09-10 12:47:06,521 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-09-10 12:47:06,521 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-09-10 12:47:06,559 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:47:06,559 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:06,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:06,579 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-09-10 12:47:06,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:06,628 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-09-10 12:47:06,935 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:47:07,043 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-10 12:47:07,043 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-10 12:47:07,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:07,258 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:47:07,462 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:07,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:07,484 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:47:07,691 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:47:07,769 [ scc.git] DEBUG has no local changes 2026-09-10 12:47:07,769 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:47:07,954 [ scc.git] DEBUG [detached HEAD 40cae1a] merge master -Dorg -Ssuccess-only 2026-09-10 12:47:07,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:47:07,958 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:47:08,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-09-10 12:47:08,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-09-10 12:47:08,801 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:47:09,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-09-10 12:47:10,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:47:10,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:47:11,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-09-10 12:47:11,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:47:11,721 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:47:11,721 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:47:11,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-09-10 12:47:11,722 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:11,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:11,745 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:47:11,763 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:47:11,763 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:47:11,786 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:47:11,992 [ scc.git] DEBUG Updating deab817..160d894 2026-09-10 12:47:12,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-09-10 12:47:12,676 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-09-10 12:47:13,173 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-09-10 12:47:13,173 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-09-10 12:47:13,211 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:47:13,211 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:13,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:13,234 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-09-10 12:47:13,271 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:13,290 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-09-10 12:47:13,542 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:47:13,638 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-10 12:47:13,638 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-10 12:47:13,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:13,863 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:47:14,029 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:14,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:14,048 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:47:14,240 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:47:14,334 [ scc.git] DEBUG has no local changes 2026-09-10 12:47:14,334 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:47:14,563 [ scc.git] DEBUG [detached HEAD 5c27e38] merge master -Dorg -Ssuccess-only 2026-09-10 12:47:14,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:47:14,568 [ scc.git] INFO Overriding base-branch from master to main 2026-09-10 12:47:14,568 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:47:14,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-09-10 12:47:15,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-09-10 12:47:15,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-09-10 12:47:16,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-09-10 12:47:17,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:47:17,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:47:18,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-09-10 12:47:18,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:47:18,632 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-09-10 12:47:19,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-09-10 12:47:19,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-09-10 12:47:20,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-09-10 12:47:20,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-09-10 12:47:21,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:47:21,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-09-10 12:47:22,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:47:22,264 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-09-10 12:47:22,264 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:47:22,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-09-10 12:47:22,265 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:22,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:22,288 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-09-10 12:47:22,313 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:47:22,313 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-09-10 12:47:22,338 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-09-10 12:47:22,510 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-09-10 12:47:23,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-09-10 12:47:24,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-09-10 12:47:24,159 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-09-10 12:47:24,823 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-09-10 12:47:24,823 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-09-10 12:47:24,850 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-09-10 12:47:25,653 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-09-10 12:47:25,653 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-09-10 12:47:25,681 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:47:25,681 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:25,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:25,700 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-09-10 12:47:25,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:25,753 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-09-10 12:47:25,973 [ scc.git] DEBUG Auto-merging README.rst 2026-09-10 12:47:25,973 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-09-10 12:47:25,973 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-09-10 12:47:25,973 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-09-10 12:47:26,005 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-10 12:47:26,006 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-10 12:47:26,048 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-09-10 12:47:26,213 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-09-10 12:47:26,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:26,448 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-09-10 12:47:26,476 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-09-10 12:47:26,499 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-09-10 12:47:26,513 [ scc.config] DEBUG Found github.token 2026-09-10 12:47:26,513 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-09-10 12:47:26,513 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-09-10 12:47:26,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:26,589 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-09-10 12:47:26,843 [ scc.git] DEBUG Auto-merging README.rst 2026-09-10 12:47:26,843 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-09-10 12:47:26,918 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:47:27,012 [ scc.git] DEBUG README.rst | 3 + 2026-09-10 12:47:27,012 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-09-10 12:47:27,012 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-09-10 12:47:27,012 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-09-10 12:47:27,012 [ scc.git] DEBUG setup.py | 5 +- 2026-09-10 12:47:27,012 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-09-10 12:47:27,012 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-09-10 12:47:27,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:27,214 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:47:27,452 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:27,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:27,483 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:47:27,725 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:47:27,878 [ scc.git] DEBUG has no local changes 2026-09-10 12:47:27,879 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:47:28,111 [ scc.git] DEBUG [detached HEAD 3119992] merge master -Dorg -Ssuccess-only 2026-09-10 12:47:28,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:47:28,113 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:47:28,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-09-10 12:47:28,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-09-10 12:47:28,968 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:47:29,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-09-10 12:47:30,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:47:30,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:47:31,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-09-10 12:47:31,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:47:31,758 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:47:31,758 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:47:31,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-09-10 12:47:31,759 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:31,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:31,793 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:47:31,820 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:47:31,820 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:47:31,861 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:47:31,943 [ scc.git] DEBUG Already up to date. 2026-09-10 12:47:31,943 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-09-10 12:47:32,461 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-09-10 12:47:32,461 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-09-10 12:47:32,492 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:47:32,492 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:32,492 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:32,512 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-09-10 12:47:32,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:32,555 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-09-10 12:47:32,780 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:47:32,899 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-10 12:47:32,899 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-10 12:47:33,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:33,100 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:47:33,319 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:33,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:33,352 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:47:33,535 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:47:33,606 [ scc.git] DEBUG has no local changes 2026-09-10 12:47:33,606 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:47:33,818 [ scc.git] DEBUG [detached HEAD 56a0682] merge master -Dorg -Ssuccess-only 2026-09-10 12:47:33,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:47:33,821 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:47:34,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-09-10 12:47:34,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-09-10 12:47:34,756 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-10 12:47:35,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-09-10 12:47:36,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:47:36,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:47:37,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-09-10 12:47:37,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:47:37,621 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:47:37,621 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:47:37,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-09-10 12:47:37,622 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:37,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:37,644 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:47:37,668 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:47:37,668 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:47:37,693 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:47:37,767 [ scc.git] DEBUG Already up to date. 2026-09-10 12:47:37,767 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-09-10 12:47:38,373 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-09-10 12:47:38,373 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-09-10 12:47:38,407 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:47:38,407 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:38,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:38,427 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-09-10 12:47:38,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:38,472 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-09-10 12:47:38,731 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:47:38,822 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-10 12:47:38,822 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-10 12:47:39,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:39,032 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:47:39,250 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:39,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:39,278 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:47:39,461 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:47:39,546 [ scc.git] DEBUG has no local changes 2026-09-10 12:47:39,547 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:47:39,738 [ scc.git] DEBUG [detached HEAD af9ddc0] merge master -Dorg -Ssuccess-only 2026-09-10 12:47:39,741 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:47:39,741 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:47:39,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-09-10 12:47:39,987 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:47:39,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-09-10 12:47:39,988 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:39,988 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:40,014 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-10 12:47:40,038 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:47:40,039 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-10 12:47:40,072 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-10 12:47:40,158 [ scc.git] DEBUG Already up to date. 2026-09-10 12:47:40,158 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:47:40,158 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:40,158 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:40,178 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:47:40,362 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:40,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:40,381 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:47:40,537 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:47:40,696 [ scc.git] DEBUG has no local changes 2026-09-10 12:47:40,696 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:47:40,872 [ scc.git] DEBUG [detached HEAD d9ffb8d] merge master -Dorg -Ssuccess-only 2026-09-10 12:47:40,875 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:47:40,875 [ scc.git] INFO Overriding base-branch from master to develop 2026-09-10 12:47:40,875 [ scc.repo] DEBUG ## PRs found: 2026-09-10 12:47:41,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-09-10 12:47:41,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None 2026-09-10 12:47:42,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-09-10 12:47:42,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-10 12:47:43,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-10 12:47:43,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-09-10 12:47:44,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2 2026-09-10 12:47:44,528 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-09-10 12:47:44,528 [ scc.repo] DEBUG ## Branches found: 2026-09-10 12:47:44,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-09-10 12:47:44,530 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:44,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:44,559 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-09-10 12:47:44,585 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-10 12:47:44,585 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-09-10 12:47:44,667 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-09-10 12:47:45,028 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-09-10 12:47:45,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-09-10 12:47:46,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-09-10 12:47:47,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-09-10 12:47:48,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-09-10 12:47:49,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-09-10 12:47:49,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-09-10 12:47:50,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-09-10 12:47:50,767 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head' 2026-09-10 12:47:51,432 [ scc.git] DEBUG From https://github.com/ome/scripts 2026-09-10 12:47:51,432 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD 2026-09-10 12:47:51,466 [ scc.git] DEBUG ## Unique users: [] 2026-09-10 12:47:51,467 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:51,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:51,488 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f' 2026-09-10 12:47:51,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:51,560 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f' 2026-09-10 12:47:51,892 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-10 12:47:52,006 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++-- 2026-09-10 12:47:52,006 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2026-09-10 12:47:52,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:52,203 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-10 12:47:52,405 [ scc.git] DEBUG Get sha1 of %s 2026-09-10 12:47:52,405 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-10 12:47:52,426 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:47:52,598 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:47:52,699 [ scc.git] DEBUG has no local changes 2026-09-10 12:47:52,699 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:47:52,938 [ scc.git] DEBUG [detached HEAD cd6da13] merge master -Dorg -Ssuccess-only 2026-09-10 12:47:52,940 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:47:52,941 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-10 12:47:53,347 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-09-10 12:47:53,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:53,619 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-09-10 12:47:53,632 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-09-10 12:47:54,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:54,054 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-09-10 12:47:54,065 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-09-10 12:47:54,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:54,516 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-09-10 12:47:54,524 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-09-10 12:47:54,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:54,955 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-09-10 12:47:55,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:55,376 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-09-10 12:47:55,384 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-09-10 12:47:55,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:55,824 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-09-10 12:47:55,833 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-09-10 12:47:56,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:56,252 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-09-10 12:47:56,262 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-09-10 12:47:56,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:56,724 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-09-10 12:47:56,735 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-09-10 12:47:57,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:57,173 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-09-10 12:47:57,181 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-09-10 12:47:57,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:57,612 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-09-10 12:47:57,625 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-09-10 12:47:58,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:58,054 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-09-10 12:47:58,067 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-09-10 12:47:58,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:58,517 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-09-10 12:47:58,526 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-09-10 12:47:58,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:58,981 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-09-10 12:47:59,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:59,417 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-09-10 12:47:59,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:47:59,851 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-09-10 12:47:59,863 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-09-10 12:48:00,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:48:00,329 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-09-10 12:48:00,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:48:00,772 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-09-10 12:48:01,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:48:01,229 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-09-10 12:48:01,239 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-09-10 12:48:01,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:48:01,684 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-09-10 12:48:01,695 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-09-10 12:48:02,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:48:02,143 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-09-10 12:48:02,153 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-09-10 12:48:02,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:48:02,605 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-09-10 12:48:02,616 [ scc.config] DEBUG Found submodule.scripts.url 2026-09-10 12:48:03,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-10 12:48:03,041 [ scc.config] DEBUG Found submodule.scripts.branch 2026-09-10 12:48:03,042 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-10 12:48:05,830 [ scc.git] DEBUG has local changes 2026-09-10 12:48:05,830 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..d5f88d8 Previously merged: - PR 193 dominikl 'Only parse import uris if stated' - PR 182 will-moore 'Revert "Remove support for Plate import"' - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' - PR 197 pwalczysko 'Fix pragma' - PR 196 will-moore 'Storage options only if needed' - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Repository: ome/omero-figure Updating 9cc36cde..3195c3df Previously merged: - PR 704 jburel 'Revert commit 49ae9c9' - PR 703 will-moore 'Readme remove rc' - PR 700 will-moore 'Fix parentheses in zoom level for loop for export script' - PR 692 will-moore 'colorbar lut background fix' - PR 701 will-moore 'bump nanoid to 3.3.18 with 'npm audit fix'' - PR 698 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.13' - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 706 will-moore 'Figure repo migration' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..6c554250 Previously merged: - PR 562 will-moore 'Keyboard select roi' - PR 563 will-moore 'Use POST data for imgRdef save' - PR 559 dependabot[bot] 'Bump js-yaml and mocha' - PR 558 dependabot[bot] 'Bump fast-uri from 3.1.4 to 3.1.5' - PR 557 dependabot[bot] 'Bump socket.io-parser from 4.2.6 to 4.2.7' - PR 541 will-moore 'Only add channel to tile request string if active' - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 564 dependabot[bot] 'Bump fast-uri from 3.1.5 to 3.1.7' - PR 565 dependabot[bot] 'Bump qs and body-parser' - PR 566 dependabot[bot] 'Bump js-yaml from 4.1.0 to 4.3.2' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) - PR 74 will-moore 'mapr extension of webclient' (exclude comment) Already up to date. Merged PRs: - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - PR 97 JoshuaFortriede 'BUG Fix: use HTML value to replace HTML' - PR 98 JoshuaFortriede 'use namespace with keys' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..6a653e4 Previously merged: - PR 95 sbesson 'Remove manual CHANGELOG in favor of automated GitHub releases' - PR 94 sbesson 'Cap pandas to 2.x and clean up unused dependencies' - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)' 2026-09-10 12:48:06,693 [ scc.git] DEBUG [detached HEAD 968fa7e] merge master -Dorg -Ssuccess-only 2026-09-10 12:48:06,693 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-09-10 12:48:06,697 [ scc.merge] INFO Repository: ome/omero-plugins 2026-09-10 12:48:06,697 [ scc.merge] INFO Already up to date. 2026-09-10 12:48:06,698 [ scc.merge] INFO 2026-09-10 12:48:06,698 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-09-10 12:48:06,698 [ scc.merge] INFO 2026-09-10 12:48:06,698 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-09-10 12:48:06,698 [ scc.merge] INFO Already up to date. 2026-09-10 12:48:06,698 [ scc.merge] INFO 2026-09-10 12:48:06,698 [ scc.merge] INFO 2026-09-10 12:48:06,698 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-09-10 12:48:06,698 [ scc.merge] INFO Excluded PRs: 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-09-10 12:48:06,698 [ scc.merge] INFO Already up to date. 2026-09-10 12:48:06,698 [ scc.merge] INFO 2026-09-10 12:48:06,698 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:48:06,698 [ scc.merge] INFO 2026-09-10 12:48:06,698 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-09-10 12:48:06,698 [ scc.merge] INFO Excluded PRs: 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-09-10 12:48:06,698 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-09-10 12:48:06,698 [ scc.merge] INFO Previously merged: 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-09-10 12:48:06,698 [ scc.merge] INFO 2026-09-10 12:48:06,698 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-09-10 12:48:06,698 [ scc.merge] INFO 2026-09-10 12:48:06,698 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-09-10 12:48:06,698 [ scc.merge] INFO Excluded PRs: 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-09-10 12:48:06,698 [ scc.merge] INFO Updating 11d3587..d5f88d8 2026-09-10 12:48:06,698 [ scc.merge] INFO Previously merged: 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 197 pwalczysko 'Fix pragma' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 196 will-moore 'Storage options only if needed' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-09-10 12:48:06,698 [ scc.merge] INFO 2026-09-10 12:48:06,698 [ scc.merge] INFO Conflicting PRs (not included): 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-09-10 12:48:06,698 [ scc.merge] INFO 2026-09-10 12:48:06,698 [ scc.merge] INFO Repository: ome/omero-figure 2026-09-10 12:48:06,698 [ scc.merge] INFO Updating 9cc36cde..3195c3df 2026-09-10 12:48:06,698 [ scc.merge] INFO Previously merged: 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 704 jburel 'Revert commit 49ae9c9' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 703 will-moore 'Readme remove rc' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 700 will-moore 'Fix parentheses in zoom level for loop for export script' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 692 will-moore 'colorbar lut background fix' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 701 will-moore 'bump nanoid to 3.3.18 with 'npm audit fix'' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 698 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.13' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' 2026-09-10 12:48:06,698 [ scc.merge] INFO - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 691 dependabot[bot] 'Bump esbuild and vite' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 685 will-moore 'Fix static files links for release build' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 683 will-moore 'Add touch support for clicking on single panel' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 680 will-moore 'Use --pre install for export script in README' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 676 dependabot[bot] 'Bump picomatch' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-09-10 12:48:06,699 [ scc.merge] INFO 2026-09-10 12:48:06,699 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 706 will-moore 'Figure repo migration' 2026-09-10 12:48:06,699 [ scc.merge] INFO 2026-09-10 12:48:06,699 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-09-10 12:48:06,699 [ scc.merge] INFO Already up to date. 2026-09-10 12:48:06,699 [ scc.merge] INFO 2026-09-10 12:48:06,699 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:48:06,699 [ scc.merge] INFO 2026-09-10 12:48:06,699 [ scc.merge] INFO Repository: ome/omero-gallery 2026-09-10 12:48:06,699 [ scc.merge] INFO Already up to date. 2026-09-10 12:48:06,699 [ scc.merge] INFO 2026-09-10 12:48:06,699 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-09-10 12:48:06,699 [ scc.merge] INFO 2026-09-10 12:48:06,699 [ scc.merge] INFO Conflicting PRs (not included): 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-09-10 12:48:06,699 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-09-10 12:48:06,700 [ scc.merge] INFO 2026-09-10 12:48:06,700 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-09-10 12:48:06,700 [ scc.merge] INFO Excluded PRs: 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-09-10 12:48:06,700 [ scc.merge] INFO Updating 7a798cee..6c554250 2026-09-10 12:48:06,700 [ scc.merge] INFO Previously merged: 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 562 will-moore 'Keyboard select roi' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 563 will-moore 'Use POST data for imgRdef save' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 559 dependabot[bot] 'Bump js-yaml and mocha' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 558 dependabot[bot] 'Bump fast-uri from 3.1.4 to 3.1.5' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 557 dependabot[bot] 'Bump socket.io-parser from 4.2.6 to 4.2.7' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 541 will-moore 'Only add channel to tile request string if active' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 535 dependabot[bot] 'Bump tmp and eslint' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 529 will-moore 'Image id and roi id initial params' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 517 will-moore 'Fix roi link permissions' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-09-10 12:48:06,700 [ scc.merge] INFO 2026-09-10 12:48:06,700 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 564 dependabot[bot] 'Bump fast-uri from 3.1.5 to 3.1.7' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 565 dependabot[bot] 'Bump qs and body-parser' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 566 dependabot[bot] 'Bump js-yaml from 4.1.0 to 4.3.2' 2026-09-10 12:48:06,700 [ scc.merge] INFO 2026-09-10 12:48:06,700 [ scc.merge] INFO Conflicting PRs (not included): 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 532 will-moore 'Zarr layers' 2026-09-10 12:48:06,700 [ scc.merge] INFO 2026-09-10 12:48:06,700 [ scc.merge] INFO Repository: ome/omero-mapr 2026-09-10 12:48:06,700 [ scc.merge] INFO Excluded PRs: 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' (exclude comment) 2026-09-10 12:48:06,700 [ scc.merge] INFO Already up to date. 2026-09-10 12:48:06,700 [ scc.merge] INFO 2026-09-10 12:48:06,700 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 97 JoshuaFortriede 'BUG Fix: use HTML value to replace HTML' 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 98 JoshuaFortriede 'use namespace with keys' 2026-09-10 12:48:06,700 [ scc.merge] INFO 2026-09-10 12:48:06,700 [ scc.merge] INFO Conflicting PRs (not included): 2026-09-10 12:48:06,700 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:48:06,700 [ scc.merge] INFO 2026-09-10 12:48:06,700 [ scc.merge] INFO Repository: ome/omero-metadata 2026-09-10 12:48:06,701 [ scc.merge] INFO Updating 3cd120c..6a653e4 2026-09-10 12:48:06,701 [ scc.merge] INFO Previously merged: 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 95 sbesson 'Remove manual CHANGELOG in favor of automated GitHub releases' 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 94 sbesson 'Cap pandas to 2.x and clean up unused dependencies' 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO Conflicting PRs (not included): 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO Repository: ome/omero-parade 2026-09-10 12:48:06,701 [ scc.merge] INFO Excluded PRs: 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-09-10 12:48:06,701 [ scc.merge] INFO Already up to date. 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-09-10 12:48:06,701 [ scc.merge] INFO Already up to date. 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO Repository: ome/omero-rois 2026-09-10 12:48:06,701 [ scc.merge] INFO Excluded PRs: 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-09-10 12:48:06,701 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-09-10 12:48:06,701 [ scc.merge] INFO Previously merged: 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO Repository: ome/omero-signup 2026-09-10 12:48:06,701 [ scc.merge] INFO Already up to date. 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO Conflicting PRs (not included): 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-09-10 12:48:06,701 [ scc.merge] INFO Excluded PRs: 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-09-10 12:48:06,701 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-09-10 12:48:06,701 [ scc.merge] INFO Previously merged: 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO Repository: ome/omero-upload 2026-09-10 12:48:06,701 [ scc.merge] INFO Already up to date. 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-09-10 12:48:06,701 [ scc.merge] INFO Updating deab817..160d894 2026-09-10 12:48:06,701 [ scc.merge] INFO Previously merged: 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,701 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,701 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:48:06,701 [ scc.merge] INFO 2026-09-10 12:48:06,702 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-09-10 12:48:06,702 [ scc.merge] INFO Excluded PRs: 2026-09-10 12:48:06,702 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-09-10 12:48:06,702 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-09-10 12:48:06,702 [ scc.merge] INFO Previously merged: 2026-09-10 12:48:06,702 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-09-10 12:48:06,702 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-09-10 12:48:06,702 [ scc.merge] INFO 2026-09-10 12:48:06,702 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,702 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-09-10 12:48:06,702 [ scc.merge] INFO 2026-09-10 12:48:06,702 [ scc.merge] INFO Conflicting PRs (not included): 2026-09-10 12:48:06,702 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-09-10 12:48:06,702 [ scc.merge] INFO 2026-09-10 12:48:06,702 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-09-10 12:48:06,702 [ scc.merge] INFO Already up to date. 2026-09-10 12:48:06,702 [ scc.merge] INFO 2026-09-10 12:48:06,702 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,702 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:48:06,702 [ scc.merge] INFO 2026-09-10 12:48:06,702 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-09-10 12:48:06,702 [ scc.merge] INFO Already up to date. 2026-09-10 12:48:06,702 [ scc.merge] INFO 2026-09-10 12:48:06,702 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,702 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-10 12:48:06,702 [ scc.merge] INFO 2026-09-10 12:48:06,702 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-09-10 12:48:06,702 [ scc.merge] INFO Already up to date. 2026-09-10 12:48:06,702 [ scc.merge] INFO 2026-09-10 12:48:06,702 [ scc.merge] INFO 2026-09-10 12:48:06,702 [ scc.merge] INFO Repository: ome/scripts 2026-09-10 12:48:06,702 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-09-10 12:48:06,702 [ scc.merge] INFO Previously merged: 2026-09-10 12:48:06,702 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-09-10 12:48:06,702 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-09-10 12:48:06,702 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-09-10 12:48:06,702 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-09-10 12:48:06,703 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-09-10 12:48:06,703 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-09-10 12:48:06,703 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-09-10 12:48:06,703 [ scc.merge] INFO 2026-09-10 12:48:06,703 [ scc.merge] INFO Merged PRs: 2026-09-10 12:48:06,703 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-09-10 12:48:06,703 [ scc.merge] INFO 2026-09-10 12:48:06,703 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-09-10 12:48:06,703 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:06,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-09-10 12:48:06,756 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:06,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:06,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-09-10 12:48:06,777 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:06,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:06,798 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-09-10 12:48:06,798 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:06,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:06,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-09-10 12:48:06,821 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:06,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:06,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-09-10 12:48:06,849 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:06,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:06,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-09-10 12:48:06,870 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:06,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:06,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-09-10 12:48:06,892 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:06,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:06,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-09-10 12:48:06,918 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:06,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:06,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-09-10 12:48:06,941 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:06,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:06,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-09-10 12:48:06,964 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:06,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:06,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-09-10 12:48:06,987 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:07,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:07,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-09-10 12:48:07,008 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:07,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:07,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-09-10 12:48:07,032 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:07,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:07,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-09-10 12:48:07,054 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:07,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:07,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-09-10 12:48:07,073 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:07,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:07,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-09-10 12:48:07,094 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:07,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:07,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-09-10 12:48:07,115 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:07,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:07,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-09-10 12:48:07,138 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:07,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:07,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-09-10 12:48:07,159 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:07,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:07,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-09-10 12:48:07,177 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:07,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:07,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-09-10 12:48:07,197 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:07,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-10 12:48:07,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-09-10 12:48:07,249 [ scc.git] DEBUG Calling 'git remote' 2026-09-10 12:48:07,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.11.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 920ff30] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798cee nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD daa8b03] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-09-10 12:49:29,953 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-09-10 12:49:41,186 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-09-10 12:49:44,096 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-09-10 12:49:49,779 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-09-10 12:50:46,696 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS