Started by upstream project "Trigger" build number 79 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b5c2ee85ce0a757c99f9ac83325f7c567e75feb6 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b5c2ee85ce0a757c99f9ac83325f7c567e75feb6 # timeout=10 Commit message: "Merge pull request #369 from ome/dependabot/submodules/omero-figure-3d9e3b8" > git rev-list --no-walk b5c2ee85ce0a757c99f9ac83325f7c567e75feb6 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 71 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.2-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.11.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.7-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.2-py3-none-any.whl (63 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.11.0-py3-none-any.whl (34 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.7-cp39-abi3-manylinux_2_28_x86_64.whl (3.8 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.7 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.2 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.11.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-05-22 03:11:31,377 [ scc.config] DEBUG Found github.token 2024-05-22 03:11:31,380 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-05-22 03:11:31,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:11:31,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:11:32,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-05-22 03:11:32,401 [ scc.gh] DEBUG 4358 remaining from 5000 (Reset at 03:05 2024-05-22 03:11:32,402 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:11:32,406 [ scc.git] DEBUG Check current status 2024-05-22 03:11:32,406 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:11:32,410 [ scc.git] DEBUG b5c2ee8 Merge pull request #369 from ome/dependabot/submodules/omero-figure-3d9e3b8 2024-05-22 03:11:32,410 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:11:32,456 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-05-22 03:11:32,458 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-22 03:11:32,461 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-22 03:11:32,464 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-22 03:11:32,640 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-05-22 03:11:32,643 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-22 03:11:32,645 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-22 03:11:32,649 [ scc.git] DEBUG 54c375382684c1da08b9f29eb129c92773913730 omero-iviewer (v0.13.0-40-g54c3753) 2024-05-22 03:11:32,651 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-22 03:11:32,654 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-22 03:11:32,656 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-22 03:11:32,659 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-22 03:11:32,662 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-22 03:11:32,664 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-22 03:11:32,667 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-22 03:11:32,669 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-22 03:11:32,672 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-22 03:11:32,675 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-22 03:11:32,677 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-22 03:11:32,679 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-22 03:11:32,682 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-22 03:11:32,686 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-22 03:11:32,690 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:11:32,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-05-22 03:11:33,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:11:33,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:11:34,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:11:34,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:11:34,670 [ scc.git] DEBUG Resetting... 2024-05-22 03:11:34,670 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-05-22 03:11:34,679 [ scc.git] DEBUG HEAD is now at b5c2ee8 Merge pull request #369 from ome/dependabot/submodules/omero-figure-3d9e3b8 2024-05-22 03:11:34,679 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-05-22 03:11:34,776 [ scc.git] DEBUG Check current status 2024-05-22 03:11:34,776 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:11:34,780 [ scc.git] DEBUG b5c2ee8 Merge pull request #369 from ome/dependabot/submodules/omero-figure-3d9e3b8 2024-05-22 03:11:34,780 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:11:34,823 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-05-22 03:11:34,826 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-22 03:11:34,828 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-22 03:11:34,831 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-22 03:11:34,837 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-05-22 03:11:34,839 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-22 03:11:34,842 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-22 03:11:34,845 [ scc.git] DEBUG 54c375382684c1da08b9f29eb129c92773913730 omero-iviewer (v0.13.0-40-g54c3753) 2024-05-22 03:11:34,848 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-22 03:11:34,851 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-22 03:11:34,853 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-22 03:11:34,856 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-22 03:11:34,859 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-22 03:11:34,861 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-22 03:11:34,864 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-22 03:11:34,866 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-22 03:11:34,869 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-22 03:11:34,871 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-22 03:11:34,873 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-22 03:11:34,876 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-22 03:11:34,878 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-22 03:11:34,881 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-22 03:11:34,882 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-05-22 03:11:34,882 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-05-22 03:11:34,882 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-05-22 03:11:34,882 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-05-22 03:11:34,882 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-05-22 03:11:34,882 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:11:35,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-05-22 03:11:35,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/371 HTTP/1.1" 200 None 2024-05-22 03:11:35,640 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-22 03:11:35,640 [ scc.repo] DEBUG - PR 371 dependabot[bot] 'Bump omero-iviewer from `54c3753` to `7b7a637`' 2024-05-22 03:11:35,640 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:11:35,640 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:11:35,640 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:11:35,644 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:11:35,647 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:11:35,647 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:11:35,650 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:11:35,654 [ scc.git] DEBUG Already up to date. 2024-05-22 03:11:35,654 [ scc.git] DEBUG Calling 'git fetch origin pull/371/head' 2024-05-22 03:11:36,018 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-05-22 03:11:36,019 [ scc.git] DEBUG * branch refs/pull/371/head -> FETCH_HEAD 2024-05-22 03:11:36,024 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:11:36,024 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:11:36,024 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:11:36,027 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15a1df456a5f9ef5c3ec7d021d31214e895678e6' 2024-05-22 03:11:36,031 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:11:36,034 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 371 (Bump omero-iviewer from `54c3753` to `7b7a637`) 15a1df456a5f9ef5c3ec7d021d31214e895678e6' 2024-05-22 03:11:36,049 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:11:36,051 [ scc.git] DEBUG omero-iviewer | 2 +- 2024-05-22 03:11:36,051 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-05-22 03:11:36,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:11:36,211 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:11:36,269 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7b7a637c795fea1582f47a6cdec499f77cfcde1e' 2024-05-22 03:11:36,270 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:11:36,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:11:36,273 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:11:36,790 [ scc.git] DEBUG has no local changes 2024-05-22 03:11:36,790 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 371 dependabot[bot] 'Bump omero-iviewer from `54c3753` to `7b7a637`' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:11:36,859 [ scc.git] DEBUG [detached HEAD e832393] merge master -Dorg -Snone 2024-05-22 03:11:36,859 [ scc.merge] INFO Repository: ome/omero-plugins 2024-05-22 03:11:36,859 [ scc.merge] INFO Already up to date. 2024-05-22 03:11:36,859 [ scc.merge] INFO 2024-05-22 03:11:36,860 [ scc.merge] INFO Merged PRs: 2024-05-22 03:11:36,860 [ scc.merge] INFO - PR 371 dependabot[bot] 'Bump omero-iviewer from `54c3753` to `7b7a637`' 2024-05-22 03:11:36,860 [ scc.merge] INFO 2024-05-22 03:11:36,860 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-05-22 03:11:36,860 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-05-22 03:11:46,078 [ scc.config] DEBUG Found github.token 2024-05-22 03:11:46,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-05-22 03:11:46,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:11:46,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:11:47,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-05-22 03:11:47,105 [ scc.gh] DEBUG 4348 remaining from 5000 (Reset at 03:05 2024-05-22 03:11:47,105 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:11:47,109 [ scc.git] DEBUG Check current status 2024-05-22 03:11:47,110 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:11:47,113 [ scc.git] DEBUG e832393 merge master -Dorg -Snone 2024-05-22 03:11:47,113 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:11:47,160 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-05-22 03:11:47,163 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-22 03:11:47,165 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-22 03:11:47,168 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-22 03:11:47,176 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-05-22 03:11:47,179 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-22 03:11:47,182 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-22 03:11:47,185 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-05-22 03:11:47,188 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-22 03:11:47,191 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-22 03:11:47,194 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-22 03:11:47,196 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-22 03:11:47,199 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-22 03:11:47,201 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-22 03:11:47,204 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-22 03:11:47,207 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-22 03:11:47,209 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-22 03:11:47,211 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-22 03:11:47,214 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-22 03:11:47,216 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-22 03:11:47,219 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-22 03:11:47,222 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-22 03:11:47,226 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:11:47,226 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-05-22 03:11:47,228 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-05-22 03:11:47,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-05-22 03:11:48,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:11:48,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:11:48,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:11:49,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:11:49,329 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:11:49,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-05-22 03:11:49,402 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:11:49,406 [ scc.git] DEBUG Check current status 2024-05-22 03:11:49,407 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:11:49,410 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-05-22 03:11:49,411 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:11:49,453 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:11:49,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-05-22 03:11:50,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:11:50,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:11:51,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:11:51,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:11:51,539 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:11:51,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:11:51,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-05-22 03:11:51,601 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:11:51,604 [ scc.git] DEBUG Check current status 2024-05-22 03:11:51,605 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:11:51,608 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-05-22 03:11:51,608 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:11:51,646 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:11:52,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-05-22 03:11:52,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:11:52,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:11:53,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:11:53,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:11:53,806 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:11:53,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:11:53,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-05-22 03:11:53,857 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:11:53,864 [ scc.git] DEBUG Check current status 2024-05-22 03:11:53,864 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:11:53,870 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-05-22 03:11:53,871 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:11:53,918 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:11:54,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-05-22 03:11:54,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:11:55,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:11:55,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:11:55,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:11:55,981 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:11:56,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:11:56,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-05-22 03:11:56,027 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:11:56,032 [ scc.git] DEBUG Check current status 2024-05-22 03:11:56,032 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:11:56,036 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-05-22 03:11:56,036 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:11:56,078 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:11:56,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-05-22 03:11:56,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:11:57,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:11:57,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:11:58,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:11:58,196 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:11:58,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:11:58,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-05-22 03:11:58,237 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:11:58,240 [ scc.git] DEBUG Check current status 2024-05-22 03:11:58,241 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:11:58,245 [ scc.git] DEBUG 3d9e3b87 Merge pull request #554 from jburel/update_publish 2024-05-22 03:11:58,245 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:11:58,290 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:11:58,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-05-22 03:11:59,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:11:59,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:11:59,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:00,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:00,397 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:00,436 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:00,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-05-22 03:12:00,437 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:00,441 [ scc.git] DEBUG Check current status 2024-05-22 03:12:00,441 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:00,445 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-05-22 03:12:00,445 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:00,489 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:00,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-05-22 03:12:01,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:01,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:02,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:02,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:02,604 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:02,639 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:02,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-05-22 03:12:02,641 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:02,644 [ scc.git] DEBUG Check current status 2024-05-22 03:12:02,644 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:02,647 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-05-22 03:12:02,648 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:02,689 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:03,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-05-22 03:12:03,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:03,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:04,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:04,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:04,793 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:04,832 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:04,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-05-22 03:12:04,833 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:04,837 [ scc.git] DEBUG Check current status 2024-05-22 03:12:04,837 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:04,841 [ scc.git] DEBUG 7b7a637 add dev to version 2024-05-22 03:12:04,841 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:04,883 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:05,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-05-22 03:12:05,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:06,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:06,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:07,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:07,012 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:07,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:07,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-05-22 03:12:07,049 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:07,052 [ scc.git] DEBUG Check current status 2024-05-22 03:12:07,052 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:07,056 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-05-22 03:12:07,056 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:07,097 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:07,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-05-22 03:12:07,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:08,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:08,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:09,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:09,236 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:09,272 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:09,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-05-22 03:12:09,273 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:09,277 [ scc.git] DEBUG Check current status 2024-05-22 03:12:09,277 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:09,280 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-05-22 03:12:09,281 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:09,320 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:09,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-05-22 03:12:10,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:10,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:11,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:11,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:11,475 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:11,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:11,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-05-22 03:12:11,515 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:11,519 [ scc.git] DEBUG Check current status 2024-05-22 03:12:11,520 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:11,524 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-05-22 03:12:11,524 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:11,566 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:12,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-05-22 03:12:12,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:12,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:13,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:13,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:13,755 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:13,792 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:13,793 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-05-22 03:12:13,793 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:13,797 [ scc.git] DEBUG Check current status 2024-05-22 03:12:13,798 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:13,801 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-05-22 03:12:13,802 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:13,844 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:14,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-05-22 03:12:14,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:15,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:15,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:15,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:15,927 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:15,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:15,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-05-22 03:12:15,965 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:15,970 [ scc.git] DEBUG Check current status 2024-05-22 03:12:15,970 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:15,974 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-05-22 03:12:15,974 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:16,016 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:16,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-05-22 03:12:16,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:17,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:17,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:18,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:18,144 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:18,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:18,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-05-22 03:12:18,183 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:18,188 [ scc.git] DEBUG Check current status 2024-05-22 03:12:18,189 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:18,193 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-05-22 03:12:18,193 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:18,234 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:18,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-05-22 03:12:19,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:19,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:19,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:20,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:20,324 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:20,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:20,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-05-22 03:12:20,364 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:20,369 [ scc.git] DEBUG Check current status 2024-05-22 03:12:20,369 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:20,374 [ scc.git] DEBUG a0148a6 Merge pull request #68 from sbesson/pytest 2024-05-22 03:12:20,374 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:20,416 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:20,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-05-22 03:12:20,749 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-05-22 03:12:20,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-05-22 03:12:21,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:21,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:22,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:22,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:22,692 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:22,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:22,732 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-05-22 03:12:22,732 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:22,737 [ scc.git] DEBUG Check current status 2024-05-22 03:12:22,738 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:22,742 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-05-22 03:12:22,743 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:22,785 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:23,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-05-22 03:12:23,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:24,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:24,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:24,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:24,999 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:25,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:25,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-05-22 03:12:25,041 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:25,046 [ scc.git] DEBUG Check current status 2024-05-22 03:12:25,046 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:25,051 [ scc.git] DEBUG deab817 update setup-python to v4 2024-05-22 03:12:25,051 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:25,096 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:25,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-05-22 03:12:25,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:26,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:26,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:27,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:27,160 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:27,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:27,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-05-22 03:12:27,210 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:27,216 [ scc.git] DEBUG Check current status 2024-05-22 03:12:27,216 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:27,222 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-05-22 03:12:27,222 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:27,271 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:27,272 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-05-22 03:12:27,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-05-22 03:12:28,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:28,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:28,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:29,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:29,422 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:29,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:29,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-05-22 03:12:29,466 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:29,471 [ scc.git] DEBUG Check current status 2024-05-22 03:12:29,471 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:29,477 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-05-22 03:12:29,477 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:29,523 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:29,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-05-22 03:12:29,863 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-05-22 03:12:30,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-05-22 03:12:30,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:31,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:31,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:31,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:31,861 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:31,923 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:31,925 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-05-22 03:12:31,925 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:31,932 [ scc.git] DEBUG Check current status 2024-05-22 03:12:31,932 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:31,937 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-05-22 03:12:31,937 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:32,045 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:32,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-05-22 03:12:32,294 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-05-22 03:12:32,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-05-22 03:12:32,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:33,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:33,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:34,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:34,298 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:34,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:34,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-05-22 03:12:34,386 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:34,396 [ scc.git] DEBUG Check current status 2024-05-22 03:12:34,396 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:34,405 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-05-22 03:12:34,406 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:34,465 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:34,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-05-22 03:12:35,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:35,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:36,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:36,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:36,560 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:36,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:36,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-05-22 03:12:36,628 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-22 03:12:36,633 [ scc.git] DEBUG Check current status 2024-05-22 03:12:36,633 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:36,639 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-05-22 03:12:36,640 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:36,688 [ scc.config] DEBUG Found remote.origin.url 2024-05-22 03:12:36,689 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-05-22 03:12:37,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-22 03:12:37,003 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-22 03:12:37,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-05-22 03:12:37,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-22 03:12:38,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-22 03:12:38,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-22 03:12:39,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-22 03:12:39,032 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:39,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:39,128 [ scc.git] DEBUG Resetting... 2024-05-22 03:12:39,128 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-05-22 03:12:39,149 [ scc.git] DEBUG HEAD is now at e832393 merge master -Dorg -Snone 2024-05-22 03:12:39,150 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-05-22 03:12:39,396 [ scc.git] DEBUG Check current status 2024-05-22 03:12:39,397 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-22 03:12:39,405 [ scc.git] DEBUG e832393 merge master -Dorg -Snone 2024-05-22 03:12:39,406 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-22 03:12:39,496 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-05-22 03:12:39,502 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-22 03:12:39,509 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-22 03:12:39,516 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-22 03:12:39,527 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-05-22 03:12:39,531 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-22 03:12:39,538 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-22 03:12:39,543 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-05-22 03:12:39,550 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-22 03:12:39,554 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-22 03:12:39,559 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-22 03:12:39,563 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-22 03:12:39,569 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-22 03:12:39,572 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-22 03:12:39,577 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-22 03:12:39,580 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-22 03:12:39,582 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-22 03:12:39,585 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-22 03:12:39,588 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-22 03:12:39,591 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-22 03:12:39,596 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-22 03:12:39,602 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-22 03:12:39,604 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-05-22 03:12:39,605 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-05-22 03:12:39,605 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-05-22 03:12:39,605 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-05-22 03:12:39,605 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-05-22 03:12:39,605 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-05-22 03:12:39,605 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:12:39,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-05-22 03:12:40,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/371 HTTP/1.1" 200 None 2024-05-22 03:12:40,337 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-22 03:12:40,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/15a1df456a5f9ef5c3ec7d021d31214e895678e6 HTTP/1.1" 200 None 2024-05-22 03:12:41,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/15a1df456a5f9ef5c3ec7d021d31214e895678e6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:12:41,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/15a1df456a5f9ef5c3ec7d021d31214e895678e6 HTTP/1.1" 200 None 2024-05-22 03:12:42,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/15a1df456a5f9ef5c3ec7d021d31214e895678e6?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:12:42,151 [ scc.repo] DEBUG - PR 371 dependabot[bot] 'Bump omero-iviewer from `54c3753` to `7b7a637`' 2024-05-22 03:12:42,151 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:12:42,151 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:12:42,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:12:42,156 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:12:42,161 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:12:42,161 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:12:42,166 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:12:42,172 [ scc.git] DEBUG Already up to date. 2024-05-22 03:12:42,172 [ scc.git] DEBUG Calling 'git fetch origin pull/371/head' 2024-05-22 03:12:42,569 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-05-22 03:12:42,569 [ scc.git] DEBUG * branch refs/pull/371/head -> FETCH_HEAD 2024-05-22 03:12:42,573 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:12:42,573 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:12:42,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:12:42,578 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15a1df456a5f9ef5c3ec7d021d31214e895678e6' 2024-05-22 03:12:42,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:12:42,587 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 371 (Bump omero-iviewer from `54c3753` to `7b7a637`) 15a1df456a5f9ef5c3ec7d021d31214e895678e6' 2024-05-22 03:12:42,591 [ scc.git] DEBUG Already up to date. 2024-05-22 03:12:42,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:12:42,758 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:12:42,941 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:12:42,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:12:42,947 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:12:43,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-05-22 03:12:43,200 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:12:43,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-05-22 03:12:43,201 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:12:43,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:12:43,219 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:12:43,231 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:12:43,231 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:12:43,239 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:12:43,245 [ scc.git] DEBUG Already up to date. 2024-05-22 03:12:43,245 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:12:43,245 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:12:43,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:12:43,250 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:12:43,293 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:12:43,293 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:12:43,298 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:43,340 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:12:43,346 [ scc.git] DEBUG has no local changes 2024-05-22 03:12:43,347 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:12:43,355 [ scc.git] DEBUG [detached HEAD b14e2f2] merge master -Dorg -Ssuccess-only 2024-05-22 03:12:43,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:43,356 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:12:43,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-05-22 03:12:44,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-05-22 03:12:44,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-05-22 03:12:45,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-05-22 03:12:45,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:12:46,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-22 03:12:46,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-05-22 03:12:47,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:12:47,180 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-05-22 03:12:47,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-05-22 03:12:48,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-05-22 03:12:48,165 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:12:48,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-05-22 03:12:48,165 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:12:48,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:12:48,170 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:12:48,175 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:12:48,175 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:12:48,180 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:12:48,185 [ scc.git] DEBUG Already up to date. 2024-05-22 03:12:48,185 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-05-22 03:12:48,585 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-05-22 03:12:48,585 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-05-22 03:12:48,590 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:12:48,591 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:12:48,591 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:12:48,597 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-05-22 03:12:48,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:12:48,609 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-05-22 03:12:48,619 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:12:48,621 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-05-22 03:12:48,621 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-05-22 03:12:48,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:12:48,791 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:12:48,829 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:12:48,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:12:48,835 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:48,875 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:12:48,881 [ scc.git] DEBUG has no local changes 2024-05-22 03:12:48,881 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:12:48,890 [ scc.git] DEBUG [detached HEAD 17baa0f] merge master -Dorg -Ssuccess-only 2024-05-22 03:12:48,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:48,891 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:12:49,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-05-22 03:12:49,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-05-22 03:12:50,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-05-22 03:12:50,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-05-22 03:12:51,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-05-22 03:12:51,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-05-22 03:12:52,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:12:52,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-05-22 03:12:53,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:12:53,229 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-05-22 03:12:53,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-05-22 03:12:54,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-05-22 03:12:54,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-05-22 03:12:55,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-05-22 03:12:55,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-05-22 03:12:55,531 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:12:55,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-05-22 03:12:55,532 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:12:55,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:12:55,538 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:12:55,543 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:12:55,544 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:12:55,549 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:12:55,554 [ scc.git] DEBUG Already up to date. 2024-05-22 03:12:55,555 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-05-22 03:12:56,020 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-05-22 03:12:56,020 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-05-22 03:12:56,024 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:12:56,025 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:12:56,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:12:56,030 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-05-22 03:12:56,035 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:12:56,039 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-05-22 03:12:56,048 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:12:56,051 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-05-22 03:12:56,051 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-05-22 03:12:56,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:12:56,212 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:12:56,251 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:12:56,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:12:56,257 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:12:56,298 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:12:56,305 [ scc.git] DEBUG has no local changes 2024-05-22 03:12:56,305 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:12:56,318 [ scc.git] DEBUG [detached HEAD c85647d] merge master -Dorg -Ssuccess-only 2024-05-22 03:12:56,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:12:56,319 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:12:56,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-05-22 03:12:57,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-05-22 03:12:57,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-05-22 03:12:58,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-05-22 03:12:58,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-05-22 03:12:59,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:12:59,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-22 03:13:00,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-05-22 03:13:00,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-05-22 03:13:01,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-05-22 03:13:01,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-05-22 03:13:01,582 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-05-22 03:13:02,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-05-22 03:13:02,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-05-22 03:13:03,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-05-22 03:13:03,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-05-22 03:13:04,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:13:04,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-05-22 03:13:05,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:13:05,001 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-05-22 03:13:05,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-05-22 03:13:05,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-05-22 03:13:06,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-05-22 03:13:07,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-05-22 03:13:07,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:13:07,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-05-22 03:13:08,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:13:08,390 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-05-22 03:13:08,391 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:13:08,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-05-22 03:13:08,391 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:08,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:08,397 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:13:08,402 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:13:08,402 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:13:08,407 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:13:08,413 [ scc.git] DEBUG Already up to date. 2024-05-22 03:13:08,413 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-05-22 03:13:08,841 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-05-22 03:13:08,842 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-05-22 03:13:08,847 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-05-22 03:13:09,323 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-05-22 03:13:09,323 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-05-22 03:13:09,329 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-05-22 03:13:09,753 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-05-22 03:13:09,753 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-05-22 03:13:09,757 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:13:09,758 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:09,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:09,763 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-05-22 03:13:09,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:09,775 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-05-22 03:13:09,840 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-05-22 03:13:09,840 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-05-22 03:13:09,840 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-05-22 03:13:09,840 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-22 03:13:09,840 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-22 03:13:09,846 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-22 03:13:09,853 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-05-22 03:13:10,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:13:10,015 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-05-22 03:13:10,023 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-22 03:13:10,029 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#73](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-05-22 03:13:10,034 [ scc.config] DEBUG Found github.token 2024-05-22 03:13:10,035 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-05-22 03:13:10,035 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-05-22 03:13:10,041 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:10,046 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-05-22 03:13:10,093 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-05-22 03:13:10,093 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-05-22 03:13:10,093 [ scc.git] DEBUG Auto-merging setup.py 2024-05-22 03:13:10,093 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-05-22 03:13:10,093 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-05-22 03:13:10,093 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-05-22 03:13:10,093 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-05-22 03:13:10,093 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-22 03:13:10,094 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-22 03:13:10,099 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-22 03:13:10,106 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-05-22 03:13:10,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:13:10,437 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-05-22 03:13:10,444 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-22 03:13:10,450 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#73](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-05-22 03:13:10,454 [ scc.config] DEBUG Found github.token 2024-05-22 03:13:10,454 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-05-22 03:13:10,454 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-05-22 03:13:10,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:10,464 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-05-22 03:13:10,477 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-05-22 03:13:10,477 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-05-22 03:13:10,477 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:13:10,480 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-05-22 03:13:10,480 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-05-22 03:13:10,480 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-05-22 03:13:10,480 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-05-22 03:13:10,480 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-05-22 03:13:10,480 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-05-22 03:13:10,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:13:10,851 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:13:10,894 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:10,894 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:10,900 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:13:10,942 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:13:10,949 [ scc.git] DEBUG has no local changes 2024-05-22 03:13:10,949 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:13:10,958 [ scc.git] DEBUG [detached HEAD 782f6cf] merge master -Dorg -Ssuccess-only 2024-05-22 03:13:10,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:13:10,959 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:13:11,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-05-22 03:13:11,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/562 HTTP/1.1" 200 None 2024-05-22 03:13:12,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/562/comments HTTP/1.1" 200 None 2024-05-22 03:13:12,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23 HTTP/1.1" 200 None 2024-05-22 03:13:13,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:13:13,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-22 03:13:14,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23 HTTP/1.1" 200 None 2024-05-22 03:13:14,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/0c814d66251860ddb01c00ade8469e45f7a1be23?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:13:14,770 [ scc.repo] DEBUG - PR 562 will-moore 'Add changelog 7.0.0' 2024-05-22 03:13:15,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560 HTTP/1.1" 200 None 2024-05-22 03:13:15,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560/comments HTTP/1.1" 200 None 2024-05-22 03:13:16,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b7cad07be139b0ba61a8d0fc2bf3033f90909569 HTTP/1.1" 200 None 2024-05-22 03:13:16,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b7cad07be139b0ba61a8d0fc2bf3033f90909569/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:13:17,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b7cad07be139b0ba61a8d0fc2bf3033f90909569/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-22 03:13:17,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b7cad07be139b0ba61a8d0fc2bf3033f90909569 HTTP/1.1" 200 None 2024-05-22 03:13:18,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b7cad07be139b0ba61a8d0fc2bf3033f90909569?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:13:18,048 [ scc.repo] DEBUG - PR 560 will-moore 'Max projection bytes' 2024-05-22 03:13:18,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-05-22 03:13:18,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-05-22 03:13:19,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-05-22 03:13:19,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:13:20,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-22 03:13:21,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-05-22 03:13:21,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:13:21,423 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-05-22 03:13:21,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-05-22 03:13:22,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-05-22 03:13:22,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:13:23,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-22 03:13:23,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-05-22 03:13:24,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:13:24,232 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-05-22 03:13:24,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543 HTTP/1.1" 200 None 2024-05-22 03:13:25,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543/comments HTTP/1.1" 200 None 2024-05-22 03:13:25,181 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:13:25,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-05-22 03:13:25,181 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:25,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:25,186 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:13:25,190 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:13:25,191 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:13:25,196 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:13:25,202 [ scc.git] DEBUG Already up to date. 2024-05-22 03:13:25,202 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-05-22 03:13:26,073 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-22 03:13:26,073 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-05-22 03:13:26,079 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-05-22 03:13:26,643 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-22 03:13:26,643 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-05-22 03:13:26,648 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head' 2024-05-22 03:13:27,621 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-22 03:13:27,621 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD 2024-05-22 03:13:27,624 [ scc.git] DEBUG Calling 'git fetch origin pull/562/head' 2024-05-22 03:13:28,008 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-22 03:13:28,008 [ scc.git] DEBUG * branch refs/pull/562/head -> FETCH_HEAD 2024-05-22 03:13:28,014 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:13:28,014 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:28,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:28,019 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-05-22 03:13:28,026 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:28,031 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-05-22 03:13:28,104 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:13:28,110 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-05-22 03:13:28,110 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-05-22 03:13:28,110 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-05-22 03:13:28,110 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-05-22 03:13:28,110 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-05-22 03:13:28,110 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-05-22 03:13:28,110 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-05-22 03:13:28,110 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-05-22 03:13:28,110 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++ 2024-05-22 03:13:28,110 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-) 2024-05-22 03:13:28,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:13:28,274 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-05-22 03:13:28,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:28,285 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-05-22 03:13:28,316 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-05-22 03:13:28,316 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-05-22 03:13:28,316 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-05-22 03:13:28,316 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:13:28,323 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-05-22 03:13:28,323 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-05-22 03:13:28,323 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-05-22 03:13:28,323 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-05-22 03:13:28,323 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-05-22 03:13:28,323 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-05-22 03:13:28,323 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-05-22 03:13:28,323 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-05-22 03:13:28,323 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-05-22 03:13:28,323 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-05-22 03:13:28,323 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-05-22 03:13:28,323 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-05-22 03:13:28,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:13:28,691 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b7cad07be139b0ba61a8d0fc2bf3033f90909569' 2024-05-22 03:13:28,719 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:28,725 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (Max projection bytes) b7cad07be139b0ba61a8d0fc2bf3033f90909569' 2024-05-22 03:13:28,942 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-05-22 03:13:28,943 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-05-22 03:13:28,943 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2024-05-22 03:13:28,943 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-05-22 03:13:28,943 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-05-22 03:13:28,943 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:13:28,951 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 24 +++++++-- 2024-05-22 03:13:28,951 [ scc.git] DEBUG omero_figure/urls.py | 8 +++ 2024-05-22 03:13:28,951 [ scc.git] DEBUG omero_figure/views.py | 58 ++++++++++++++++++++++ 2024-05-22 03:13:28,951 [ scc.git] DEBUG src/css/figure.css | 5 -- 2024-05-22 03:13:28,951 [ scc.git] DEBUG src/index.html | 1 + 2024-05-22 03:13:28,951 [ scc.git] DEBUG src/js/models/figure_model.js | 29 ++++++++++- 2024-05-22 03:13:28,951 [ scc.git] DEBUG src/js/models/panel_model.js | 29 ++++++++++- 2024-05-22 03:13:28,951 [ scc.git] DEBUG src/js/views/info_panel_view.js | 3 +- 2024-05-22 03:13:28,951 [ scc.git] DEBUG src/js/views/modal_views.js | 2 + 2024-05-22 03:13:28,951 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2024-05-22 03:13:28,951 [ scc.git] DEBUG src/js/views/right_panel_view.js | 5 ++ 2024-05-22 03:13:28,951 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 3 +- 2024-05-22 03:13:28,953 [ scc.git] DEBUG src/templates/image_display_options.template.html | 4 +- 2024-05-22 03:13:28,953 [ scc.git] DEBUG src/templates/info_panel.template.html | 2 + 2024-05-22 03:13:28,953 [ scc.git] DEBUG 14 files changed, 161 insertions(+), 14 deletions(-) 2024-05-22 03:13:29,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:13:29,116 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0c814d66251860ddb01c00ade8469e45f7a1be23' 2024-05-22 03:13:29,123 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:29,129 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 562 (Add changelog 7.0.0) 0c814d66251860ddb01c00ade8469e45f7a1be23' 2024-05-22 03:13:29,146 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:13:29,148 [ scc.git] DEBUG CHANGELOG.md | 10 ++++++++++ 2024-05-22 03:13:29,149 [ scc.git] DEBUG 1 file changed, 10 insertions(+) 2024-05-22 03:13:29,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:13:29,531 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:13:29,578 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:29,579 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:29,584 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:13:29,623 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:13:29,631 [ scc.git] DEBUG has no local changes 2024-05-22 03:13:29,631 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 562 will-moore 'Add changelog 7.0.0' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:13:29,643 [ scc.git] DEBUG [detached HEAD 0a585c6e] merge master -Dorg -Ssuccess-only 2024-05-22 03:13:29,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:13:29,644 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:13:30,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-05-22 03:13:30,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-05-22 03:13:31,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-05-22 03:13:31,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-05-22 03:13:32,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:13:32,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-05-22 03:13:32,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:13:32,958 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-05-22 03:13:32,958 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:13:32,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-05-22 03:13:32,958 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:32,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:32,964 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:13:32,969 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:13:32,970 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:13:32,976 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:13:32,982 [ scc.git] DEBUG Already up to date. 2024-05-22 03:13:32,982 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-05-22 03:13:33,402 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-05-22 03:13:33,402 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-05-22 03:13:33,406 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:13:33,406 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:33,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:33,412 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-05-22 03:13:33,418 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:33,424 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-05-22 03:13:33,448 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-05-22 03:13:33,448 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:13:33,451 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-05-22 03:13:33,451 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-05-22 03:13:33,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:13:33,626 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:13:33,667 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:33,667 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:33,673 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:13:33,712 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:13:33,719 [ scc.git] DEBUG has no local changes 2024-05-22 03:13:33,719 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:13:33,727 [ scc.git] DEBUG [detached HEAD 741ae0a] merge master -Dorg -Ssuccess-only 2024-05-22 03:13:33,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:13:33,728 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:13:34,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-05-22 03:13:34,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-05-22 03:13:34,631 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-22 03:13:35,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-05-22 03:13:35,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:13:36,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-22 03:13:36,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-05-22 03:13:37,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:13:37,085 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-05-22 03:13:37,085 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:13:37,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-05-22 03:13:37,085 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:37,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:37,090 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:13:37,095 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:13:37,095 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:13:37,099 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:13:37,105 [ scc.git] DEBUG Already up to date. 2024-05-22 03:13:37,106 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-05-22 03:13:37,486 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-05-22 03:13:37,486 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-05-22 03:13:37,490 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:13:37,491 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:37,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:37,496 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-05-22 03:13:37,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:37,506 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-05-22 03:13:37,516 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:13:37,520 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-05-22 03:13:37,520 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-05-22 03:13:37,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:13:37,685 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:13:37,723 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:37,723 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:37,728 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:13:37,766 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:13:37,774 [ scc.git] DEBUG has no local changes 2024-05-22 03:13:37,774 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:13:37,784 [ scc.git] DEBUG [detached HEAD 85188b6] merge master -Dorg -Ssuccess-only 2024-05-22 03:13:37,784 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:13:37,785 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:13:38,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-05-22 03:13:38,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-05-22 03:13:39,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-05-22 03:13:39,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-05-22 03:13:40,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:13:40,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-22 03:13:41,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-05-22 03:13:41,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:13:41,612 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-05-22 03:13:42,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-05-22 03:13:42,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-05-22 03:13:43,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-05-22 03:13:43,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:13:44,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-22 03:13:44,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-05-22 03:13:44,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:13:44,968 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-05-22 03:13:45,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-05-22 03:13:45,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-05-22 03:13:46,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-05-22 03:13:47,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:13:47,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-05-22 03:13:48,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:13:48,305 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-05-22 03:13:48,306 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:13:48,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-05-22 03:13:48,306 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:48,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:48,312 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:13:48,317 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:13:48,317 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:13:48,323 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:13:48,329 [ scc.git] DEBUG Already up to date. 2024-05-22 03:13:48,329 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-05-22 03:13:48,747 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-22 03:13:48,747 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-05-22 03:13:48,752 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-05-22 03:13:49,789 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-22 03:13:49,789 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-05-22 03:13:49,794 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-05-22 03:13:50,300 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-22 03:13:50,300 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-05-22 03:13:50,305 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:13:50,306 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:50,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:50,311 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-05-22 03:13:50,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:50,322 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-05-22 03:13:50,348 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-05-22 03:13:50,349 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:13:50,352 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-05-22 03:13:50,352 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-05-22 03:13:50,352 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-05-22 03:13:50,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:13:50,517 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-05-22 03:13:50,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:50,529 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-05-22 03:13:50,594 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-05-22 03:13:50,594 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-05-22 03:13:50,594 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-05-22 03:13:50,594 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-05-22 03:13:50,595 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:13:50,599 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-05-22 03:13:50,599 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-05-22 03:13:50,599 [ scc.git] DEBUG src/app/header.html | 5 + 2024-05-22 03:13:50,599 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-05-22 03:13:50,599 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-05-22 03:13:50,599 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-05-22 03:13:50,599 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-05-22 03:13:50,599 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-05-22 03:13:50,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:13:50,931 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-05-22 03:13:50,937 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:50,943 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-05-22 03:13:50,984 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-05-22 03:13:50,985 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:13:50,988 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-05-22 03:13:50,988 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-05-22 03:13:50,988 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-05-22 03:13:51,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:13:51,346 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:13:51,389 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:51,389 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:51,395 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:13:51,434 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:13:51,441 [ scc.git] DEBUG has no local changes 2024-05-22 03:13:51,441 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:13:51,452 [ scc.git] DEBUG [detached HEAD 4707a07] merge master -Dorg -Ssuccess-only 2024-05-22 03:13:51,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:13:51,456 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:13:51,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-05-22 03:13:52,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-05-22 03:13:52,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-05-22 03:13:53,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-05-22 03:13:53,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:13:54,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-22 03:13:54,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-05-22 03:13:55,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:13:55,179 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-05-22 03:13:55,179 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:13:55,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-05-22 03:13:55,179 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:55,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:55,186 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:13:55,190 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:13:55,191 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:13:55,196 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:13:55,201 [ scc.git] DEBUG Already up to date. 2024-05-22 03:13:55,201 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-05-22 03:13:55,582 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-05-22 03:13:55,582 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-05-22 03:13:55,587 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:13:55,587 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:55,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:55,592 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-05-22 03:13:55,598 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:55,602 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-05-22 03:13:55,612 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:13:55,615 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-05-22 03:13:55,615 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-05-22 03:13:55,615 [ scc.git] DEBUG requirements.txt | 2 +- 2024-05-22 03:13:55,615 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-05-22 03:13:55,615 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-05-22 03:13:55,615 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-05-22 03:13:55,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:13:55,775 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:13:55,813 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:13:55,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:13:55,818 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:13:55,855 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:13:55,870 [ scc.git] DEBUG has no local changes 2024-05-22 03:13:55,870 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:13:55,883 [ scc.git] DEBUG [detached HEAD c4c8a9b] merge master -Dorg -Ssuccess-only 2024-05-22 03:13:55,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:13:55,884 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:13:56,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-05-22 03:13:56,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-05-22 03:13:57,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-05-22 03:13:57,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-05-22 03:13:58,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:13:58,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-05-22 03:13:59,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:13:59,224 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-05-22 03:13:59,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-05-22 03:14:00,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-05-22 03:14:00,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-05-22 03:14:01,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:14:01,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-05-22 03:14:02,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:14:02,058 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-05-22 03:14:02,058 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:14:02,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-05-22 03:14:02,058 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:02,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:02,063 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:14:02,068 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:14:02,068 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:14:02,073 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:14:02,079 [ scc.git] DEBUG Already up to date. 2024-05-22 03:14:02,079 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-05-22 03:14:02,624 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-05-22 03:14:02,625 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-05-22 03:14:02,630 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-05-22 03:14:03,467 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-05-22 03:14:03,467 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-05-22 03:14:03,473 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:14:03,473 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:03,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:03,479 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-05-22 03:14:03,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:03,492 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-05-22 03:14:03,590 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-05-22 03:14:03,591 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-05-22 03:14:03,591 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-05-22 03:14:03,591 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-05-22 03:14:03,591 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-22 03:14:03,591 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-22 03:14:03,597 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-22 03:14:03,604 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-05-22 03:14:03,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:03,779 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-05-22 03:14:03,786 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-22 03:14:03,793 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#73](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-05-22 03:14:03,798 [ scc.config] DEBUG Found github.token 2024-05-22 03:14:03,799 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-05-22 03:14:03,799 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-05-22 03:14:03,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:03,810 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-05-22 03:14:03,842 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-05-22 03:14:03,842 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-05-22 03:14:03,842 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-05-22 03:14:03,842 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-22 03:14:03,843 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-22 03:14:03,848 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-22 03:14:03,856 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-05-22 03:14:04,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:04,195 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-05-22 03:14:04,205 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-22 03:14:04,211 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#73](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-05-22 03:14:04,216 [ scc.config] DEBUG Found github.token 2024-05-22 03:14:04,216 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-05-22 03:14:04,216 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:14:04,253 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:04,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:04,258 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:14:04,294 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:14:04,301 [ scc.git] DEBUG has no local changes 2024-05-22 03:14:04,301 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:14:04,308 [ scc.git] DEBUG [detached HEAD be90e23] merge master -Dorg -Ssuccess-only 2024-05-22 03:14:04,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:14:04,309 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:14:04,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-05-22 03:14:05,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-05-22 03:14:05,197 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-22 03:14:05,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-05-22 03:14:06,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:14:06,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-22 03:14:07,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-05-22 03:14:07,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:14:07,698 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-05-22 03:14:08,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-05-22 03:14:08,172 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-22 03:14:08,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-05-22 03:14:09,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:14:09,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-22 03:14:10,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-05-22 03:14:10,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:14:10,703 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-05-22 03:14:11,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-05-22 03:14:11,184 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-22 03:14:11,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-05-22 03:14:12,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:14:12,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-22 03:14:13,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-05-22 03:14:13,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:14:13,799 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-05-22 03:14:14,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-05-22 03:14:14,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-05-22 03:14:15,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-05-22 03:14:15,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-05-22 03:14:16,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-05-22 03:14:16,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-05-22 03:14:16,668 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:14:16,668 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-05-22 03:14:16,668 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:16,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:16,674 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:14:16,680 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:14:16,680 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:14:16,686 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:14:16,692 [ scc.git] DEBUG Already up to date. 2024-05-22 03:14:16,692 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-05-22 03:14:17,057 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-05-22 03:14:17,057 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-05-22 03:14:17,061 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-05-22 03:14:17,437 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-05-22 03:14:17,437 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-05-22 03:14:17,442 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-05-22 03:14:17,820 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-05-22 03:14:17,820 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-05-22 03:14:17,825 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:14:17,825 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:17,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:17,831 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-05-22 03:14:17,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:17,841 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-05-22 03:14:17,851 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:14:17,854 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-05-22 03:14:17,854 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-05-22 03:14:18,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:18,012 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-05-22 03:14:18,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:18,023 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-05-22 03:14:18,046 [ scc.git] DEBUG Auto-merging package-lock.json 2024-05-22 03:14:18,047 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:14:18,050 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-05-22 03:14:18,050 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-05-22 03:14:18,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:18,445 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-05-22 03:14:18,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:18,456 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-05-22 03:14:18,466 [ scc.git] DEBUG Auto-merging package-lock.json 2024-05-22 03:14:18,467 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:14:18,470 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-05-22 03:14:18,470 [ scc.git] DEBUG package.json | 2 +- 2024-05-22 03:14:18,470 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-05-22 03:14:18,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:18,849 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:14:18,888 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:18,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:18,893 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:14:18,936 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:14:18,947 [ scc.git] DEBUG has no local changes 2024-05-22 03:14:18,948 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:14:18,957 [ scc.git] DEBUG [detached HEAD 118ebd0] merge master -Dorg -Ssuccess-only 2024-05-22 03:14:18,957 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:14:18,957 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:14:19,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-05-22 03:14:19,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-05-22 03:14:20,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-05-22 03:14:20,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:14:21,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-05-22 03:14:21,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:14:21,772 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-05-22 03:14:21,773 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:14:21,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-05-22 03:14:21,773 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:21,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:21,779 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:14:21,784 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:14:21,784 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:14:21,789 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:14:21,794 [ scc.git] DEBUG Already up to date. 2024-05-22 03:14:21,794 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-05-22 03:14:22,166 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-05-22 03:14:22,167 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-05-22 03:14:22,171 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:14:22,171 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:22,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:22,176 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-05-22 03:14:22,183 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:22,188 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-05-22 03:14:22,196 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:14:22,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:22,359 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:14:22,398 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:22,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:22,403 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:14:22,443 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:14:22,449 [ scc.git] DEBUG has no local changes 2024-05-22 03:14:22,449 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:14:22,457 [ scc.git] DEBUG [detached HEAD 2142957] merge master -Dorg -Ssuccess-only 2024-05-22 03:14:22,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:14:22,457 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:14:22,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-05-22 03:14:23,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-05-22 03:14:23,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-05-22 03:14:24,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-05-22 03:14:24,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-05-22 03:14:25,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:14:25,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-05-22 03:14:26,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:14:26,202 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-05-22 03:14:26,202 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:14:26,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-05-22 03:14:26,202 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:26,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:26,208 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:14:26,212 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:14:26,212 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:14:26,217 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:14:26,222 [ scc.git] DEBUG Already up to date. 2024-05-22 03:14:26,222 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-05-22 03:14:26,695 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-05-22 03:14:26,696 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-05-22 03:14:26,700 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:14:26,700 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:26,700 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:26,705 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-05-22 03:14:26,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:26,715 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-05-22 03:14:26,724 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-05-22 03:14:26,724 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:14:26,727 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-05-22 03:14:26,727 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-05-22 03:14:26,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:26,889 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:14:26,927 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:26,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:26,933 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:14:26,972 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:14:26,979 [ scc.git] DEBUG has no local changes 2024-05-22 03:14:26,979 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:14:26,987 [ scc.git] DEBUG [detached HEAD 70f6aa6] merge master -Dorg -Ssuccess-only 2024-05-22 03:14:26,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:14:26,987 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:14:27,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-05-22 03:14:27,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-05-22 03:14:28,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-05-22 03:14:28,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-05-22 03:14:29,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:14:29,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-05-22 03:14:30,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:14:30,385 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-05-22 03:14:30,385 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:14:30,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-05-22 03:14:30,385 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:30,385 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:30,390 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:14:30,394 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:14:30,395 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:14:30,400 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:14:30,407 [ scc.git] DEBUG Already up to date. 2024-05-22 03:14:30,407 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-05-22 03:14:30,814 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-05-22 03:14:30,814 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-05-22 03:14:30,819 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:14:30,819 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:30,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:30,825 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-05-22 03:14:30,830 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:30,835 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-05-22 03:14:30,865 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-05-22 03:14:30,865 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-05-22 03:14:30,865 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-05-22 03:14:30,865 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-05-22 03:14:30,865 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-05-22 03:14:30,865 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-05-22 03:14:30,865 [ scc.git] DEBUG Auto-merging setup.py 2024-05-22 03:14:30,865 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-05-22 03:14:30,865 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-22 03:14:30,866 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-22 03:14:30,872 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-05-22 03:14:30,879 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-05-22 03:14:31,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:31,037 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-05-22 03:14:31,044 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-05-22 03:14:31,050 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#73](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - setup.py - omero_signup/views.py - omero_signup/signup_settings.py --conflicts 2024-05-22 03:14:31,055 [ scc.config] DEBUG Found github.token 2024-05-22 03:14:31,055 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-05-22 03:14:31,055 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:14:31,095 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:31,095 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:31,100 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:14:31,135 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:14:31,141 [ scc.git] DEBUG has no local changes 2024-05-22 03:14:31,142 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:14:31,149 [ scc.git] DEBUG [detached HEAD 77ee9ed] merge master -Dorg -Ssuccess-only 2024-05-22 03:14:31,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:14:31,150 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:14:31,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-05-22 03:14:32,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-05-22 03:14:32,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-05-22 03:14:33,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-05-22 03:14:33,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:14:33,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-05-22 03:14:34,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:14:34,429 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-05-22 03:14:34,429 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:14:34,429 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-05-22 03:14:34,429 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:34,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:34,435 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:14:34,441 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:14:34,441 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:14:34,447 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:14:34,452 [ scc.git] DEBUG Already up to date. 2024-05-22 03:14:34,453 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-05-22 03:14:34,889 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-05-22 03:14:34,889 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-05-22 03:14:34,895 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:14:34,895 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:34,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:34,900 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-05-22 03:14:34,907 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:34,912 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-05-22 03:14:34,924 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-22 03:14:34,927 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-05-22 03:14:34,927 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-05-22 03:14:34,927 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-05-22 03:14:34,927 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-05-22 03:14:34,927 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-05-22 03:14:34,927 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-05-22 03:14:34,927 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-05-22 03:14:34,927 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-05-22 03:14:34,927 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-05-22 03:14:34,929 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-05-22 03:14:34,929 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-05-22 03:14:34,929 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-05-22 03:14:34,929 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-05-22 03:14:34,929 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-05-22 03:14:34,929 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-05-22 03:14:34,929 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-05-22 03:14:34,930 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-05-22 03:14:34,930 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-05-22 03:14:34,930 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-05-22 03:14:34,930 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-05-22 03:14:34,930 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-05-22 03:14:34,930 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-05-22 03:14:34,930 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-05-22 03:14:34,930 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-05-22 03:14:35,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:35,082 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:14:35,124 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:35,124 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:35,130 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:14:35,167 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:14:35,174 [ scc.git] DEBUG has no local changes 2024-05-22 03:14:35,174 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:14:35,183 [ scc.git] DEBUG [detached HEAD 0691d89] merge master -Dorg -Ssuccess-only 2024-05-22 03:14:35,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:14:35,183 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:14:35,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-05-22 03:14:35,509 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:14:35,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-05-22 03:14:35,510 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:35,510 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:35,515 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:14:35,519 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:14:35,519 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:14:35,524 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:14:35,529 [ scc.git] DEBUG Already up to date. 2024-05-22 03:14:35,529 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:14:35,529 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:35,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:35,534 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:14:35,586 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:35,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:35,591 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:14:35,631 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:14:35,638 [ scc.git] DEBUG has no local changes 2024-05-22 03:14:35,638 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:14:35,650 [ scc.git] DEBUG [detached HEAD 14e9353] merge master -Dorg -Ssuccess-only 2024-05-22 03:14:35,651 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:14:35,651 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:14:35,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-05-22 03:14:35,946 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:14:35,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-05-22 03:14:35,946 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:35,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:35,953 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:14:35,958 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:14:35,958 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:14:35,963 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:14:35,969 [ scc.git] DEBUG Already up to date. 2024-05-22 03:14:35,969 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:14:35,969 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:35,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:35,974 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:14:36,012 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:36,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:36,017 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:14:36,057 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:14:36,063 [ scc.git] DEBUG has no local changes 2024-05-22 03:14:36,063 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:14:36,072 [ scc.git] DEBUG [detached HEAD 5aeeec3] merge master -Dorg -Ssuccess-only 2024-05-22 03:14:36,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:14:36,073 [ scc.git] INFO Overriding base-branch from master to main 2024-05-22 03:14:36,073 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:14:36,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-05-22 03:14:36,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-05-22 03:14:37,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-05-22 03:14:37,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-05-22 03:14:38,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-05-22 03:14:38,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:14:39,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-22 03:14:39,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-05-22 03:14:40,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:14:40,348 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-05-22 03:14:40,348 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:14:40,348 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-05-22 03:14:40,349 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:40,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:40,356 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-05-22 03:14:40,362 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:14:40,362 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-05-22 03:14:40,369 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-05-22 03:14:40,377 [ scc.git] DEBUG Already up to date. 2024-05-22 03:14:40,378 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-05-22 03:14:40,796 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-05-22 03:14:40,796 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-05-22 03:14:40,801 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:14:40,801 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:40,802 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:40,808 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-05-22 03:14:40,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:40,820 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-05-22 03:14:40,853 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-05-22 03:14:40,853 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-05-22 03:14:40,854 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-22 03:14:40,854 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-22 03:14:40,861 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-05-22 03:14:40,870 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-05-22 03:14:41,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:41,038 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-05-22 03:14:41,045 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-05-22 03:14:41,053 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#73](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-05-22 03:14:41,060 [ scc.config] DEBUG Found github.token 2024-05-22 03:14:41,060 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-05-22 03:14:41,060 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:14:41,108 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:41,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:41,114 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:14:41,162 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:14:41,170 [ scc.git] DEBUG has no local changes 2024-05-22 03:14:41,170 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:14:41,181 [ scc.git] DEBUG [detached HEAD 522f6a1] merge master -Dorg -Ssuccess-only 2024-05-22 03:14:41,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:14:41,182 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:14:41,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-05-22 03:14:41,483 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:14:41,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-05-22 03:14:41,484 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:41,484 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:41,490 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:14:41,497 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:14:41,498 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:14:41,506 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:14:41,515 [ scc.git] DEBUG Already up to date. 2024-05-22 03:14:41,516 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:14:41,516 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:41,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:41,523 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:14:41,571 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:41,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:41,577 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:14:41,627 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:14:41,636 [ scc.git] DEBUG has no local changes 2024-05-22 03:14:41,637 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:14:41,648 [ scc.git] DEBUG [detached HEAD 191292b] merge master -Dorg -Ssuccess-only 2024-05-22 03:14:41,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:14:41,649 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:14:41,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-05-22 03:14:41,933 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:14:41,934 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-05-22 03:14:41,934 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:41,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:41,943 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:14:41,950 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:14:41,950 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:14:41,959 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:14:41,966 [ scc.git] DEBUG Already up to date. 2024-05-22 03:14:41,967 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:14:41,967 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:41,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:41,974 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:14:42,028 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:42,028 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:42,036 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:14:42,081 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:14:42,088 [ scc.git] DEBUG has no local changes 2024-05-22 03:14:42,088 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:14:42,097 [ scc.git] DEBUG [detached HEAD 41c78c5] merge master -Dorg -Ssuccess-only 2024-05-22 03:14:42,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:14:42,098 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:14:42,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-05-22 03:14:42,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-05-22 03:14:43,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-05-22 03:14:43,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-05-22 03:14:44,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:14:44,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-05-22 03:14:45,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:14:45,277 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-05-22 03:14:45,277 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:14:45,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-05-22 03:14:45,277 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:45,277 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:45,286 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-22 03:14:45,293 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:14:45,293 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-22 03:14:45,300 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-22 03:14:45,316 [ scc.git] DEBUG Already up to date. 2024-05-22 03:14:45,317 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-05-22 03:14:45,776 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-05-22 03:14:45,777 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-05-22 03:14:45,783 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:14:45,783 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:45,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:45,790 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-05-22 03:14:45,797 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:45,803 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-05-22 03:14:45,845 [ scc.git] DEBUG Auto-merging Dockerfile 2024-05-22 03:14:45,845 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-05-22 03:14:45,845 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-22 03:14:45,846 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-22 03:14:45,854 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-05-22 03:14:45,862 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-05-22 03:14:46,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:46,027 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-05-22 03:14:46,034 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-05-22 03:14:46,043 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#73](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-05-22 03:14:46,050 [ scc.config] DEBUG Found github.token 2024-05-22 03:14:46,050 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-05-22 03:14:46,050 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:14:46,096 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:46,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:46,102 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:14:46,150 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:14:46,158 [ scc.git] DEBUG has no local changes 2024-05-22 03:14:46,158 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:14:46,168 [ scc.git] DEBUG [detached HEAD ffa361d] merge master -Dorg -Ssuccess-only 2024-05-22 03:14:46,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:14:46,169 [ scc.git] INFO Overriding base-branch from master to develop 2024-05-22 03:14:46,169 [ scc.repo] DEBUG ## PRs found: 2024-05-22 03:14:46,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-05-22 03:14:47,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-05-22 03:14:47,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-05-22 03:14:48,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-05-22 03:14:48,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-05-22 03:14:48,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-05-22 03:14:49,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-05-22 03:14:49,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-05-22 03:14:50,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-22 03:14:50,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-05-22 03:14:51,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-05-22 03:14:51,231 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-05-22 03:14:51,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-05-22 03:14:52,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-05-22 03:14:52,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-05-22 03:14:53,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-05-22 03:14:53,234 [ scc.repo] DEBUG ## Branches found: 2024-05-22 03:14:53,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-05-22 03:14:53,234 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:53,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:53,240 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-05-22 03:14:53,244 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-22 03:14:53,245 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-05-22 03:14:53,250 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-05-22 03:14:53,256 [ scc.git] DEBUG Already up to date. 2024-05-22 03:14:53,256 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-05-22 03:14:53,665 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-05-22 03:14:53,665 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-05-22 03:14:53,670 [ scc.git] DEBUG ## Unique users: [] 2024-05-22 03:14:53,671 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:53,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:53,677 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-22 03:14:53,684 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:53,689 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-22 03:14:53,713 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-05-22 03:14:53,713 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-05-22 03:14:53,713 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-22 03:14:53,714 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-22 03:14:53,720 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a' 2024-05-22 03:14:53,726 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-05-22 03:14:53,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:53,894 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-22 03:14:53,901 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a' 2024-05-22 03:14:53,907 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#73](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-05-22 03:14:53,911 [ scc.config] DEBUG Found github.token 2024-05-22 03:14:53,912 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-05-22 03:14:53,912 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-22 03:14:53,949 [ scc.git] DEBUG Get sha1 of %s 2024-05-22 03:14:53,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-22 03:14:53,954 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:14:53,990 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:14:53,996 [ scc.git] DEBUG has no local changes 2024-05-22 03:14:53,997 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:14:54,005 [ scc.git] DEBUG [detached HEAD 12bd2b2] merge master -Dorg -Ssuccess-only 2024-05-22 03:14:54,005 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:14:54,005 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-22 03:14:54,085 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-05-22 03:14:54,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:54,332 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-05-22 03:14:54,340 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-05-22 03:14:54,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:54,757 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-05-22 03:14:54,762 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-05-22 03:14:55,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:55,173 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-05-22 03:14:55,178 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-05-22 03:14:55,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:55,602 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-05-22 03:14:56,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:56,018 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-05-22 03:14:56,023 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-05-22 03:14:56,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:56,439 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-05-22 03:14:56,443 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-05-22 03:14:56,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:56,873 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-05-22 03:14:56,879 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-05-22 03:14:57,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:57,294 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-05-22 03:14:57,299 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-05-22 03:14:57,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:57,722 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-05-22 03:14:57,728 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-05-22 03:14:58,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:58,136 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-05-22 03:14:58,140 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-05-22 03:14:58,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:58,550 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-05-22 03:14:58,556 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-05-22 03:14:58,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:59,002 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-05-22 03:14:59,007 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-05-22 03:14:59,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:59,422 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-05-22 03:14:59,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:14:59,870 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-05-22 03:15:00,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:15:00,277 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-05-22 03:15:00,281 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-05-22 03:15:00,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:15:00,680 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-05-22 03:15:01,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:15:01,107 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-05-22 03:15:01,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:15:01,508 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-05-22 03:15:01,512 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-05-22 03:15:01,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:15:01,934 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-05-22 03:15:01,938 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-05-22 03:15:02,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:15:02,352 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-05-22 03:15:02,357 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-05-22 03:15:02,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:15:02,761 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-05-22 03:15:02,766 [ scc.config] DEBUG Found submodule.scripts.url 2024-05-22 03:15:03,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-22 03:15:03,171 [ scc.config] DEBUG Found submodule.scripts.branch 2024-05-22 03:15:03,172 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-22 03:15:03,246 [ scc.git] DEBUG has local changes 2024-05-22 03:15:03,246 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 371 dependabot[bot] 'Bump omero-iviewer from `54c3753` to `7b7a637`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 562 will-moore 'Add changelog 7.0.0' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#73 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/73/)' 2024-05-22 03:15:03,260 [ scc.git] DEBUG [detached HEAD 84962a9] merge master -Dorg -Ssuccess-only 2024-05-22 03:15:03,260 [ scc.merge] INFO Repository: ome/omero-plugins 2024-05-22 03:15:03,260 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-05-22 03:15:03,260 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,261 [ scc.merge] INFO 2024-05-22 03:15:03,261 [ scc.merge] INFO Merged PRs: 2024-05-22 03:15:03,261 [ scc.merge] INFO - PR 371 dependabot[bot] 'Bump omero-iviewer from `54c3753` to `7b7a637`' 2024-05-22 03:15:03,261 [ scc.merge] INFO 2024-05-22 03:15:03,261 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-05-22 03:15:03,261 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,261 [ scc.merge] INFO 2024-05-22 03:15:03,261 [ scc.merge] INFO 2024-05-22 03:15:03,261 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-05-22 03:15:03,261 [ scc.merge] INFO Excluded PRs: 2024-05-22 03:15:03,261 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-05-22 03:15:03,261 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,261 [ scc.merge] INFO 2024-05-22 03:15:03,261 [ scc.merge] INFO Merged PRs: 2024-05-22 03:15:03,261 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-05-22 03:15:03,261 [ scc.merge] INFO 2024-05-22 03:15:03,261 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-05-22 03:15:03,261 [ scc.merge] INFO Excluded PRs: 2024-05-22 03:15:03,261 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-05-22 03:15:03,261 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-05-22 03:15:03,261 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-05-22 03:15:03,261 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-05-22 03:15:03,261 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,261 [ scc.merge] INFO 2024-05-22 03:15:03,261 [ scc.merge] INFO Merged PRs: 2024-05-22 03:15:03,261 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-05-22 03:15:03,261 [ scc.merge] INFO 2024-05-22 03:15:03,261 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-05-22 03:15:03,261 [ scc.merge] INFO Excluded PRs: 2024-05-22 03:15:03,261 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-05-22 03:15:03,261 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-05-22 03:15:03,261 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,261 [ scc.merge] INFO 2024-05-22 03:15:03,261 [ scc.merge] INFO Merged PRs: 2024-05-22 03:15:03,261 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-05-22 03:15:03,261 [ scc.merge] INFO 2024-05-22 03:15:03,262 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-22 03:15:03,262 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-05-22 03:15:03,262 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-05-22 03:15:03,262 [ scc.merge] INFO 2024-05-22 03:15:03,262 [ scc.merge] INFO Repository: ome/omero-figure 2024-05-22 03:15:03,262 [ scc.merge] INFO Excluded PRs: 2024-05-22 03:15:03,262 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (stage: draft) 2024-05-22 03:15:03,262 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,262 [ scc.merge] INFO 2024-05-22 03:15:03,262 [ scc.merge] INFO Merged PRs: 2024-05-22 03:15:03,262 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-05-22 03:15:03,262 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-05-22 03:15:03,262 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' 2024-05-22 03:15:03,262 [ scc.merge] INFO - PR 562 will-moore 'Add changelog 7.0.0' 2024-05-22 03:15:03,262 [ scc.merge] INFO 2024-05-22 03:15:03,262 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-05-22 03:15:03,262 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,262 [ scc.merge] INFO 2024-05-22 03:15:03,262 [ scc.merge] INFO Merged PRs: 2024-05-22 03:15:03,262 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-05-22 03:15:03,262 [ scc.merge] INFO 2024-05-22 03:15:03,262 [ scc.merge] INFO Repository: ome/omero-gallery 2024-05-22 03:15:03,262 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,262 [ scc.merge] INFO 2024-05-22 03:15:03,262 [ scc.merge] INFO Merged PRs: 2024-05-22 03:15:03,262 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-05-22 03:15:03,262 [ scc.merge] INFO 2024-05-22 03:15:03,262 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-05-22 03:15:03,262 [ scc.merge] INFO Excluded PRs: 2024-05-22 03:15:03,262 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-05-22 03:15:03,262 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-05-22 03:15:03,262 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,262 [ scc.merge] INFO 2024-05-22 03:15:03,262 [ scc.merge] INFO Merged PRs: 2024-05-22 03:15:03,262 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-05-22 03:15:03,262 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-05-22 03:15:03,262 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-05-22 03:15:03,262 [ scc.merge] INFO 2024-05-22 03:15:03,262 [ scc.merge] INFO Repository: ome/omero-mapr 2024-05-22 03:15:03,263 [ scc.merge] INFO Excluded PRs: 2024-05-22 03:15:03,263 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-05-22 03:15:03,263 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,263 [ scc.merge] INFO 2024-05-22 03:15:03,263 [ scc.merge] INFO Merged PRs: 2024-05-22 03:15:03,263 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-05-22 03:15:03,263 [ scc.merge] INFO 2024-05-22 03:15:03,263 [ scc.merge] INFO Repository: ome/omero-metadata 2024-05-22 03:15:03,263 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,263 [ scc.merge] INFO 2024-05-22 03:15:03,263 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-22 03:15:03,263 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-05-22 03:15:03,263 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-05-22 03:15:03,263 [ scc.merge] INFO 2024-05-22 03:15:03,263 [ scc.merge] INFO Repository: ome/omero-parade 2024-05-22 03:15:03,263 [ scc.merge] INFO Excluded PRs: 2024-05-22 03:15:03,263 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-05-22 03:15:03,263 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-05-22 03:15:03,263 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-05-22 03:15:03,263 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,263 [ scc.merge] INFO 2024-05-22 03:15:03,263 [ scc.merge] INFO Merged PRs: 2024-05-22 03:15:03,263 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-05-22 03:15:03,263 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-05-22 03:15:03,263 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-05-22 03:15:03,263 [ scc.merge] INFO 2024-05-22 03:15:03,263 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-05-22 03:15:03,263 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,263 [ scc.merge] INFO 2024-05-22 03:15:03,263 [ scc.merge] INFO Merged PRs: 2024-05-22 03:15:03,263 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-05-22 03:15:03,263 [ scc.merge] INFO 2024-05-22 03:15:03,263 [ scc.merge] INFO Repository: ome/omero-rois 2024-05-22 03:15:03,263 [ scc.merge] INFO Excluded PRs: 2024-05-22 03:15:03,263 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-05-22 03:15:03,263 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,263 [ scc.merge] INFO 2024-05-22 03:15:03,263 [ scc.merge] INFO Merged PRs: 2024-05-22 03:15:03,264 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-05-22 03:15:03,264 [ scc.merge] INFO 2024-05-22 03:15:03,264 [ scc.merge] INFO Repository: ome/omero-signup 2024-05-22 03:15:03,264 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,264 [ scc.merge] INFO 2024-05-22 03:15:03,264 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-22 03:15:03,264 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-05-22 03:15:03,264 [ scc.merge] INFO 2024-05-22 03:15:03,264 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-05-22 03:15:03,264 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,264 [ scc.merge] INFO 2024-05-22 03:15:03,264 [ scc.merge] INFO Merged PRs: 2024-05-22 03:15:03,264 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-05-22 03:15:03,264 [ scc.merge] INFO 2024-05-22 03:15:03,264 [ scc.merge] INFO Repository: ome/omero-upload 2024-05-22 03:15:03,264 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,264 [ scc.merge] INFO 2024-05-22 03:15:03,264 [ scc.merge] INFO 2024-05-22 03:15:03,264 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-05-22 03:15:03,264 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,264 [ scc.merge] INFO 2024-05-22 03:15:03,264 [ scc.merge] INFO 2024-05-22 03:15:03,264 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-05-22 03:15:03,264 [ scc.merge] INFO Excluded PRs: 2024-05-22 03:15:03,264 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-05-22 03:15:03,264 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,264 [ scc.merge] INFO 2024-05-22 03:15:03,264 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-22 03:15:03,264 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-05-22 03:15:03,264 [ scc.merge] INFO 2024-05-22 03:15:03,264 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-05-22 03:15:03,264 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,264 [ scc.merge] INFO 2024-05-22 03:15:03,264 [ scc.merge] INFO 2024-05-22 03:15:03,264 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-05-22 03:15:03,264 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,264 [ scc.merge] INFO 2024-05-22 03:15:03,264 [ scc.merge] INFO 2024-05-22 03:15:03,264 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-05-22 03:15:03,265 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,265 [ scc.merge] INFO 2024-05-22 03:15:03,265 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-22 03:15:03,265 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-05-22 03:15:03,265 [ scc.merge] INFO 2024-05-22 03:15:03,265 [ scc.merge] INFO Repository: ome/scripts 2024-05-22 03:15:03,265 [ scc.merge] INFO Excluded PRs: 2024-05-22 03:15:03,265 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-05-22 03:15:03,265 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-05-22 03:15:03,265 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-05-22 03:15:03,265 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-05-22 03:15:03,265 [ scc.merge] INFO Already up to date. 2024-05-22 03:15:03,265 [ scc.merge] INFO 2024-05-22 03:15:03,265 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-22 03:15:03,265 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-05-22 03:15:03,265 [ scc.merge] INFO 2024-05-22 03:15:03,265 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-05-22 03:15:03,265 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-05-22 03:15:03,270 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-05-22 03:15:03,275 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-05-22 03:15:03,280 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-05-22 03:15:03,284 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-05-22 03:15:03,289 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,293 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,293 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-05-22 03:15:03,293 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,297 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-05-22 03:15:03,298 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-05-22 03:15:03,302 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-05-22 03:15:03,307 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-05-22 03:15:03,311 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,316 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,316 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-05-22 03:15:03,316 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-05-22 03:15:03,320 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,325 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,325 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-05-22 03:15:03,325 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-05-22 03:15:03,329 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,334 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,334 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-05-22 03:15:03,334 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,338 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,338 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-05-22 03:15:03,338 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-05-22 03:15:03,343 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,347 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,347 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-05-22 03:15:03,347 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,352 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,352 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-05-22 03:15:03,352 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-05-22 03:15:03,356 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-05-22 03:15:03,361 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-22 03:15:03,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-05-22 03:15:03,365 [ scc.git] DEBUG Calling 'git remote' 2024-05-22 03:15:03,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 64d676d] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 3d9e3b87 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7b7a637 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from a0148a6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 5a90893 nothing to commit, working tree clean [detached HEAD 27a76d0] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-05-22 03:15:49,464 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-05-22 03:15:58,475 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-05-22 03:16:00,864 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-22 03:16:05,506 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-22 03:16:53,575 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS