Started by upstream project "Trigger" build number 92 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 17debd0389692e2455795d3c9d15b57151d5d590 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 17debd0389692e2455795d3c9d15b57151d5d590 # timeout=10 Commit message: "Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54" > git rev-list --no-walk 17debd0389692e2455795d3c9d15b57151d5d590 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 82 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.1-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.7-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.1-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.6.2-py3-none-any.whl (164 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.7-cp39-abi3-manylinux_2_28_x86_64.whl (3.8 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.6.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.7 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.12.1 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-06-04 00:39:10,578 [ scc.config] DEBUG Found github.token 2024-06-04 00:39:10,581 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-04 00:39:10,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:39:11,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:39:11,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-04 00:39:11,595 [ scc.gh] DEBUG 2251 remaining from 5000 (Reset at 00:06 2024-06-04 00:39:11,596 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:39:11,601 [ scc.git] DEBUG Check current status 2024-06-04 00:39:11,601 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:39:11,605 [ scc.git] DEBUG 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54 2024-06-04 00:39:11,605 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:39:11,651 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-04 00:39:11,654 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-04 00:39:11,657 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-04 00:39:11,659 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-04 00:39:12,006 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-06-04 00:39:12,009 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-04 00:39:12,012 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-04 00:39:12,015 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-04 00:39:12,019 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-04 00:39:12,021 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-04 00:39:12,024 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-04 00:39:12,026 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-04 00:39:12,029 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-04 00:39:12,032 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-04 00:39:12,239 [ scc.git] DEBUG 7688c540375cf05252c31f216e0248b69a2659c2 omero-test-infra (v0.6.3-57-g7688c54) 2024-06-04 00:39:12,242 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-04 00:39:12,245 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-04 00:39:12,248 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-04 00:39:12,250 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-04 00:39:12,253 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-04 00:39:12,256 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-04 00:39:12,260 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-04 00:39:12,265 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:39:12,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-04 00:39:12,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:39:13,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:39:13,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:39:14,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:39:14,213 [ scc.git] DEBUG Resetting... 2024-06-04 00:39:14,213 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-04 00:39:14,223 [ scc.git] DEBUG HEAD is now at 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54 2024-06-04 00:39:14,223 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-04 00:39:14,331 [ scc.git] DEBUG Check current status 2024-06-04 00:39:14,332 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:39:14,337 [ scc.git] DEBUG 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54 2024-06-04 00:39:14,337 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:39:14,390 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-04 00:39:14,393 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-04 00:39:14,396 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-04 00:39:14,400 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-04 00:39:14,407 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-06-04 00:39:14,410 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-04 00:39:14,413 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-04 00:39:14,416 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-04 00:39:14,420 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-04 00:39:14,424 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-04 00:39:14,426 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-04 00:39:14,429 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-04 00:39:14,432 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-04 00:39:14,436 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-04 00:39:14,439 [ scc.git] DEBUG 7688c540375cf05252c31f216e0248b69a2659c2 omero-test-infra (v0.6.3-57-g7688c54) 2024-06-04 00:39:14,443 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-04 00:39:14,446 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-04 00:39:14,448 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-04 00:39:14,451 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-04 00:39:14,453 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-04 00:39:14,456 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-04 00:39:14,459 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-04 00:39:14,460 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-04 00:39:14,460 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-04 00:39:14,460 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-04 00:39:14,460 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-04 00:39:14,461 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-04 00:39:14,461 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:39:14,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-04 00:39:15,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/373 HTTP/1.1" 200 None 2024-06-04 00:39:15,159 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-04 00:39:15,159 [ scc.repo] DEBUG - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-04 00:39:15,159 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:39:15,159 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:39:15,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:39:15,164 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:39:15,169 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:39:15,169 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:39:15,174 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:39:15,178 [ scc.git] DEBUG Already up to date. 2024-06-04 00:39:15,178 [ scc.git] DEBUG Calling 'git fetch origin pull/373/head' 2024-06-04 00:39:15,564 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-04 00:39:15,564 [ scc.git] DEBUG * branch refs/pull/373/head -> FETCH_HEAD 2024-06-04 00:39:15,570 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:39:15,570 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:39:15,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:39:15,574 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-04 00:39:15,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:39:15,581 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 373 (Bump omero-test-infra from `7688c54` to `cda3ec6`) c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-04 00:39:15,597 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:39:15,599 [ scc.git] DEBUG omero-test-infra | 2 +- 2024-06-04 00:39:15,599 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-04 00:39:15,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:39:15,767 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:39:15,870 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2024-06-04 00:39:15,871 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:39:15,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:39:15,875 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:39:16,734 [ scc.git] DEBUG has no local changes 2024-06-04 00:39:16,734 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:39:16,810 [ scc.git] DEBUG [detached HEAD 88b0618] merge master -Dorg -Snone 2024-06-04 00:39:16,810 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-04 00:39:16,810 [ scc.merge] INFO Already up to date. 2024-06-04 00:39:16,810 [ scc.merge] INFO 2024-06-04 00:39:16,810 [ scc.merge] INFO Merged PRs: 2024-06-04 00:39:16,810 [ scc.merge] INFO - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-04 00:39:16,810 [ scc.merge] INFO 2024-06-04 00:39:16,810 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-04 00:39:16,810 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-06-04 00:39:31,094 [ scc.config] DEBUG Found github.token 2024-06-04 00:39:31,097 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-04 00:39:31,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:39:31,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:39:32,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-04 00:39:32,284 [ scc.gh] DEBUG 2241 remaining from 5000 (Reset at 00:06 2024-06-04 00:39:32,285 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:39:32,290 [ scc.git] DEBUG Check current status 2024-06-04 00:39:32,290 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:39:32,294 [ scc.git] DEBUG 88b0618 merge master -Dorg -Snone 2024-06-04 00:39:32,294 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:39:32,350 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-04 00:39:32,353 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-04 00:39:32,359 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-04 00:39:32,363 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-04 00:39:32,371 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-06-04 00:39:32,374 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-04 00:39:32,377 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-04 00:39:32,381 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-04 00:39:32,384 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-04 00:39:32,389 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-04 00:39:32,393 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-04 00:39:32,396 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-04 00:39:32,400 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-04 00:39:32,403 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-04 00:39:32,407 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-04 00:39:32,409 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-04 00:39:32,412 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-04 00:39:32,415 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-04 00:39:32,417 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-04 00:39:32,420 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-04 00:39:32,424 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-04 00:39:32,427 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-04 00:39:32,433 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:39:32,433 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-06-04 00:39:32,436 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-06-04 00:39:32,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-04 00:39:33,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:39:33,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:39:34,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:39:34,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:39:34,485 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:39:34,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-04 00:39:34,566 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:39:34,570 [ scc.git] DEBUG Check current status 2024-06-04 00:39:34,570 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:39:34,574 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-06-04 00:39:34,574 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:39:34,620 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:39:34,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-06-04 00:39:35,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:39:35,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:39:36,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:39:36,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:39:36,738 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:39:36,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:39:36,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-04 00:39:36,781 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:39:36,785 [ scc.git] DEBUG Check current status 2024-06-04 00:39:36,785 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:39:36,789 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-06-04 00:39:36,789 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:39:36,837 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:39:37,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-06-04 00:39:37,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:39:38,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:39:38,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:39:38,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:39:38,969 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:39:39,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:39:39,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-04 00:39:39,014 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:39:39,018 [ scc.git] DEBUG Check current status 2024-06-04 00:39:39,018 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:39:39,023 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-06-04 00:39:39,023 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:39:39,072 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:39:39,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-06-04 00:39:39,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:39:40,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:39:40,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:39:41,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:39:41,181 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:39:41,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:39:41,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-04 00:39:41,224 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:39:41,228 [ scc.git] DEBUG Check current status 2024-06-04 00:39:41,228 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:39:41,233 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-04 00:39:41,233 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:39:41,278 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:39:41,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-06-04 00:39:42,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:39:42,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:39:43,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:39:43,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:39:43,429 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:39:43,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:39:43,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-04 00:39:43,473 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:39:43,478 [ scc.git] DEBUG Check current status 2024-06-04 00:39:43,478 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:39:43,504 [ scc.git] DEBUG 3d9e3b87 Merge pull request #554 from jburel/update_publish 2024-06-04 00:39:43,505 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:39:43,547 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:39:43,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-06-04 00:39:44,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:39:44,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:39:45,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:39:45,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:39:45,674 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:39:45,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:39:45,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-04 00:39:45,717 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:39:45,722 [ scc.git] DEBUG Check current status 2024-06-04 00:39:45,723 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:39:45,729 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-04 00:39:45,729 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:39:45,778 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:39:46,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-06-04 00:39:46,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:39:47,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:39:47,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:39:47,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:39:47,892 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:39:47,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:39:47,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-04 00:39:47,965 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:39:47,971 [ scc.git] DEBUG Check current status 2024-06-04 00:39:47,971 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:39:47,976 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-06-04 00:39:47,976 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:39:48,023 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:39:48,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-06-04 00:39:48,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:39:49,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:39:49,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:39:50,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:39:50,098 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:39:50,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:39:50,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-04 00:39:50,143 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:39:50,149 [ scc.git] DEBUG Check current status 2024-06-04 00:39:50,149 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:39:50,156 [ scc.git] DEBUG 7b7a637 add dev to version 2024-06-04 00:39:50,156 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:39:50,208 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:39:50,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-06-04 00:39:51,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:39:51,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:39:51,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:39:52,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:39:52,343 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:39:52,390 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:39:52,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-04 00:39:52,391 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:39:52,397 [ scc.git] DEBUG Check current status 2024-06-04 00:39:52,397 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:39:52,401 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-06-04 00:39:52,402 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:39:52,450 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:39:52,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-06-04 00:39:53,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:39:53,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:39:54,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:39:54,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:39:54,536 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:39:54,587 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:39:54,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-04 00:39:54,589 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:39:54,595 [ scc.git] DEBUG Check current status 2024-06-04 00:39:54,595 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:39:54,601 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-04 00:39:54,602 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:39:54,652 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:39:55,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-06-04 00:39:55,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:39:55,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:39:56,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:39:56,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:39:56,709 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:39:56,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:39:56,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-04 00:39:56,761 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:39:56,768 [ scc.git] DEBUG Check current status 2024-06-04 00:39:56,768 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:39:56,776 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-06-04 00:39:56,776 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:39:56,829 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:39:57,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-06-04 00:39:57,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:39:58,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:39:58,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:39:58,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:39:58,913 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:39:58,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:39:58,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-04 00:39:58,955 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:39:58,961 [ scc.git] DEBUG Check current status 2024-06-04 00:39:58,961 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:39:58,966 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-06-04 00:39:58,966 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:39:59,011 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:39:59,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-06-04 00:39:59,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:40:00,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:40:00,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:40:01,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:40:01,150 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:40:01,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:40:01,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-04 00:40:01,196 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:40:01,202 [ scc.git] DEBUG Check current status 2024-06-04 00:40:01,202 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:40:01,207 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-06-04 00:40:01,208 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:40:01,257 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:40:01,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-06-04 00:40:02,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:40:02,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:40:02,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:40:03,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:40:03,409 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:40:03,451 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:40:03,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-04 00:40:03,453 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:40:03,460 [ scc.git] DEBUG Check current status 2024-06-04 00:40:03,460 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:40:03,465 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-04 00:40:03,466 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:40:03,515 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:40:03,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-06-04 00:40:04,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:40:04,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:40:05,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:40:05,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:40:05,609 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:40:05,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:40:05,657 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-04 00:40:05,658 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:40:05,665 [ scc.git] DEBUG Check current status 2024-06-04 00:40:05,665 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:40:05,671 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-06-04 00:40:05,671 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:40:05,718 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:40:06,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-04 00:40:06,029 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-04 00:40:06,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-06-04 00:40:06,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:40:07,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:40:07,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:40:08,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:40:08,005 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:40:08,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:40:08,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-04 00:40:08,053 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:40:08,059 [ scc.git] DEBUG Check current status 2024-06-04 00:40:08,059 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:40:08,065 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-06-04 00:40:08,065 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:40:08,119 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:40:08,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-06-04 00:40:08,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:40:09,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:40:09,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:40:10,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:40:10,256 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:40:10,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:40:10,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-04 00:40:10,303 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:40:10,309 [ scc.git] DEBUG Check current status 2024-06-04 00:40:10,310 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:40:10,317 [ scc.git] DEBUG deab817 update setup-python to v4 2024-06-04 00:40:10,318 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:40:10,368 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:40:10,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-06-04 00:40:11,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:40:11,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:40:12,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:40:12,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:40:12,458 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:40:12,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:40:12,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-04 00:40:12,501 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:40:12,505 [ scc.git] DEBUG Check current status 2024-06-04 00:40:12,505 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:40:12,511 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-04 00:40:12,511 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:40:12,558 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:40:12,559 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-06-04 00:40:12,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-06-04 00:40:13,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:40:13,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:40:14,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:40:14,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:40:14,664 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:40:14,709 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:40:14,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-04 00:40:14,710 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:40:14,716 [ scc.git] DEBUG Check current status 2024-06-04 00:40:14,717 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:40:14,722 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-04 00:40:14,722 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:40:14,766 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:40:15,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-04 00:40:15,090 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-04 00:40:15,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-06-04 00:40:15,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:40:16,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:40:16,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:40:16,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:40:17,000 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:40:17,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:40:17,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-04 00:40:17,043 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:40:17,048 [ scc.git] DEBUG Check current status 2024-06-04 00:40:17,048 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:40:17,053 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-06-04 00:40:17,053 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:40:17,099 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:40:17,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-04 00:40:17,432 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-04 00:40:17,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-06-04 00:40:18,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:40:18,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:40:18,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:40:19,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:40:19,353 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:40:19,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:40:19,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-04 00:40:19,396 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:40:19,401 [ scc.git] DEBUG Check current status 2024-06-04 00:40:19,401 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:40:19,406 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-04 00:40:19,406 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:40:19,453 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:40:19,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-06-04 00:40:20,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:40:20,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:40:21,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:40:21,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:40:21,533 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:40:21,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:40:21,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-04 00:40:21,576 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-04 00:40:21,583 [ scc.git] DEBUG Check current status 2024-06-04 00:40:21,584 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:40:21,623 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-06-04 00:40:21,624 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:40:21,671 [ scc.config] DEBUG Found remote.origin.url 2024-06-04 00:40:21,671 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-06-04 00:40:21,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-04 00:40:21,949 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-04 00:40:22,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-06-04 00:40:22,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-04 00:40:23,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-04 00:40:23,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-04 00:40:23,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-04 00:40:23,913 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:40:23,963 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:40:23,963 [ scc.git] DEBUG Resetting... 2024-06-04 00:40:23,964 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-04 00:40:23,978 [ scc.git] DEBUG HEAD is now at 88b0618 merge master -Dorg -Snone 2024-06-04 00:40:23,978 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-04 00:40:24,084 [ scc.git] DEBUG Check current status 2024-06-04 00:40:24,084 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-04 00:40:24,094 [ scc.git] DEBUG 88b0618 merge master -Dorg -Snone 2024-06-04 00:40:24,094 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-04 00:40:24,147 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-04 00:40:24,150 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-04 00:40:24,154 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-04 00:40:24,160 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-04 00:40:24,171 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-06-04 00:40:24,174 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-04 00:40:24,177 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-04 00:40:24,180 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-04 00:40:24,183 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-04 00:40:24,187 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-04 00:40:24,189 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-04 00:40:24,192 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-04 00:40:24,196 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-04 00:40:24,199 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-04 00:40:24,202 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-04 00:40:24,206 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-04 00:40:24,208 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-04 00:40:24,211 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-04 00:40:24,214 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-04 00:40:24,217 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-04 00:40:24,220 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-04 00:40:24,224 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-04 00:40:24,225 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-04 00:40:24,225 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-04 00:40:24,225 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-04 00:40:24,225 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-04 00:40:24,225 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-04 00:40:24,225 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-06-04 00:40:24,225 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:40:24,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-04 00:40:24,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/373 HTTP/1.1" 200 None 2024-06-04 00:40:24,930 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-04 00:40:25,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc HTTP/1.1" 200 None 2024-06-04 00:40:25,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:40:26,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc HTTP/1.1" 200 None 2024-06-04 00:40:26,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/c8279eaae4892995e532fa290a1f76ace85afdbc?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:40:26,722 [ scc.repo] DEBUG - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-04 00:40:26,722 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:40:26,722 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:40:26,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:26,730 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:40:26,735 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:40:26,735 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:40:26,742 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:40:26,753 [ scc.git] DEBUG Already up to date. 2024-06-04 00:40:26,753 [ scc.git] DEBUG Calling 'git fetch origin pull/373/head' 2024-06-04 00:40:27,140 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-04 00:40:27,140 [ scc.git] DEBUG * branch refs/pull/373/head -> FETCH_HEAD 2024-06-04 00:40:27,145 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:40:27,146 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:40:27,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:27,152 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-04 00:40:27,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:27,162 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 373 (Bump omero-test-infra from `7688c54` to `cda3ec6`) c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-04 00:40:27,167 [ scc.git] DEBUG Already up to date. 2024-06-04 00:40:27,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:40:27,337 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:40:27,394 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:40:27,395 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:27,402 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:40:27,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-06-04 00:40:27,765 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:40:27,765 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-04 00:40:27,765 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:40:27,765 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:27,772 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:40:27,777 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:40:27,777 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:40:27,784 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:40:27,789 [ scc.git] DEBUG Already up to date. 2024-06-04 00:40:27,790 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:40:27,790 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:40:27,790 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:27,794 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:40:27,833 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:40:27,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:27,839 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:40:27,877 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:40:27,884 [ scc.git] DEBUG has no local changes 2024-06-04 00:40:27,884 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:40:27,893 [ scc.git] DEBUG [detached HEAD 52b922f] merge master -Dorg -Ssuccess-only 2024-06-04 00:40:27,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:40:27,893 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:40:28,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-06-04 00:40:28,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-06-04 00:40:29,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-06-04 00:40:29,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-04 00:40:30,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:40:30,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-04 00:40:31,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-04 00:40:31,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:40:31,584 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-06-04 00:40:32,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-06-04 00:40:32,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-06-04 00:40:32,494 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:40:32,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-04 00:40:32,494 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:40:32,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:32,501 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:40:32,506 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:40:32,506 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:40:32,512 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:40:32,519 [ scc.git] DEBUG Already up to date. 2024-06-04 00:40:32,519 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-06-04 00:40:32,978 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-06-04 00:40:32,978 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-06-04 00:40:32,984 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:40:32,984 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:40:32,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:32,989 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-04 00:40:32,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:32,999 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-04 00:40:33,029 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:40:33,032 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-06-04 00:40:33,032 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-06-04 00:40:33,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:40:33,194 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:40:33,234 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:40:33,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:33,239 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:40:33,282 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:40:33,291 [ scc.git] DEBUG has no local changes 2024-06-04 00:40:33,291 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:40:33,300 [ scc.git] DEBUG [detached HEAD b58bbbb] merge master -Dorg -Ssuccess-only 2024-06-04 00:40:33,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:40:33,301 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:40:33,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-06-04 00:40:34,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None 2024-06-04 00:40:34,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None 2024-06-04 00:40:35,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-04 00:40:35,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:40:36,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-04 00:40:36,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:40:36,535 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-04 00:40:37,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None 2024-06-04 00:40:37,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-04 00:40:37,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:40:38,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-04 00:40:38,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:40:38,787 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency' 2024-06-04 00:40:39,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-06-04 00:40:39,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-06-04 00:40:40,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-06-04 00:40:40,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-06-04 00:40:41,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-04 00:40:41,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:40:42,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-04 00:40:42,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:40:42,538 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-06-04 00:40:42,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-06-04 00:40:43,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-06-04 00:40:43,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-06-04 00:40:44,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-06-04 00:40:44,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-06-04 00:40:44,838 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:40:44,838 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-04 00:40:44,838 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:40:44,838 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:44,844 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:40:44,852 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:40:44,852 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:40:44,859 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:40:44,867 [ scc.git] DEBUG Already up to date. 2024-06-04 00:40:44,867 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-06-04 00:40:45,367 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-04 00:40:45,368 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-06-04 00:40:45,373 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head' 2024-06-04 00:40:45,878 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-04 00:40:45,878 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD 2024-06-04 00:40:45,884 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-04 00:40:46,408 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-04 00:40:46,408 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-04 00:40:46,414 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:40:46,414 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:40:46,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:46,420 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-04 00:40:46,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:46,430 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-04 00:40:46,456 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:40:46,459 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-06-04 00:40:46,459 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-06-04 00:40:46,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:40:46,608 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-04 00:40:46,615 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:46,619 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-04 00:40:46,665 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-04 00:40:46,666 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:40:46,669 [ scc.git] DEBUG setup.py | 3 +-- 2024-06-04 00:40:46,669 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++------- 2024-06-04 00:40:46,669 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +----- 2024-06-04 00:40:46,669 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-) 2024-06-04 00:40:47,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:40:47,020 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-04 00:40:47,026 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:47,031 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-04 00:40:47,088 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-04 00:40:47,088 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py 2024-06-04 00:40:47,089 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:40:47,093 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++-- 2024-06-04 00:40:47,093 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++ 2024-06-04 00:40:47,093 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-) 2024-06-04 00:40:47,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:40:47,430 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:40:47,473 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:40:47,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:47,479 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:40:47,518 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:40:47,525 [ scc.git] DEBUG has no local changes 2024-06-04 00:40:47,526 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:40:47,535 [ scc.git] DEBUG [detached HEAD 0c6e667] merge master -Dorg -Ssuccess-only 2024-06-04 00:40:47,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:40:47,535 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:40:47,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-06-04 00:40:48,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-06-04 00:40:48,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-06-04 00:40:49,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-06-04 00:40:49,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-04 00:40:50,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:40:50,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-04 00:40:51,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-04 00:40:51,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-06-04 00:40:52,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-04 00:40:52,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-06-04 00:40:52,514 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-06-04 00:40:52,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-06-04 00:40:53,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-06-04 00:40:54,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-06-04 00:40:54,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-04 00:40:55,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:40:55,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-04 00:40:55,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:40:55,945 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-04 00:40:56,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-06-04 00:40:56,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-06-04 00:40:57,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-06-04 00:40:57,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-04 00:40:58,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:40:58,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-04 00:40:59,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:40:59,295 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-06-04 00:40:59,295 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:40:59,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-04 00:40:59,296 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:40:59,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:40:59,303 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:40:59,310 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:40:59,311 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:40:59,319 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:40:59,328 [ scc.git] DEBUG Already up to date. 2024-06-04 00:40:59,328 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-06-04 00:40:59,806 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-04 00:40:59,806 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-06-04 00:40:59,813 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-06-04 00:41:00,240 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-04 00:41:00,240 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-06-04 00:41:00,247 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-06-04 00:41:00,774 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-04 00:41:00,774 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-06-04 00:41:00,782 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:41:00,782 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:00,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:00,794 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-04 00:41:00,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:00,819 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-04 00:41:00,938 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-04 00:41:00,938 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-04 00:41:00,938 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-04 00:41:00,939 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-04 00:41:00,939 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-04 00:41:00,949 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-04 00:41:00,958 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-04 00:41:01,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:41:01,124 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-04 00:41:01,136 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-04 00:41:01,144 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-06-04 00:41:01,152 [ scc.config] DEBUG Found github.token 2024-06-04 00:41:01,152 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-06-04 00:41:01,153 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-04 00:41:01,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:01,170 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-04 00:41:01,209 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-06-04 00:41:01,209 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-06-04 00:41:01,209 [ scc.git] DEBUG Auto-merging setup.py 2024-06-04 00:41:01,209 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-04 00:41:01,209 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-04 00:41:01,209 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-04 00:41:01,209 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-06-04 00:41:01,209 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-04 00:41:01,210 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-04 00:41:01,218 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-04 00:41:01,226 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-04 00:41:01,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:41:01,531 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-04 00:41:01,541 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-04 00:41:01,548 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-06-04 00:41:01,557 [ scc.config] DEBUG Found github.token 2024-06-04 00:41:01,557 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-06-04 00:41:01,557 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-04 00:41:01,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:01,573 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-04 00:41:01,592 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-06-04 00:41:01,592 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-04 00:41:01,592 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:41:01,596 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-06-04 00:41:01,596 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-06-04 00:41:01,596 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-06-04 00:41:01,597 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-06-04 00:41:01,597 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-06-04 00:41:01,597 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-06-04 00:41:01,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:41:01,950 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:41:02,016 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:02,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:02,027 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:41:02,086 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:41:02,098 [ scc.git] DEBUG has no local changes 2024-06-04 00:41:02,098 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:41:02,110 [ scc.git] DEBUG [detached HEAD e9058f8] merge master -Dorg -Ssuccess-only 2024-06-04 00:41:02,110 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:41:02,111 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:41:02,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-06-04 00:41:02,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/562 HTTP/1.1" 200 None 2024-06-04 00:41:03,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/562/comments HTTP/1.1" 200 None 2024-06-04 00:41:03,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23 HTTP/1.1" 200 None 2024-06-04 00:41:04,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:41:05,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-04 00:41:05,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23 HTTP/1.1" 200 None 2024-06-04 00:41:06,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/0c814d66251860ddb01c00ade8469e45f7a1be23?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:41:06,101 [ scc.repo] DEBUG - PR 562 will-moore 'Add changelog 7.0.0' 2024-06-04 00:41:06,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560 HTTP/1.1" 200 None 2024-06-04 00:41:07,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560/comments HTTP/1.1" 200 None 2024-06-04 00:41:07,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b7cad07be139b0ba61a8d0fc2bf3033f90909569 HTTP/1.1" 200 None 2024-06-04 00:41:07,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b7cad07be139b0ba61a8d0fc2bf3033f90909569/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:41:08,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b7cad07be139b0ba61a8d0fc2bf3033f90909569/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-04 00:41:08,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b7cad07be139b0ba61a8d0fc2bf3033f90909569 HTTP/1.1" 200 None 2024-06-04 00:41:09,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b7cad07be139b0ba61a8d0fc2bf3033f90909569?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:41:09,305 [ scc.repo] DEBUG - PR 560 will-moore 'Max projection bytes' 2024-06-04 00:41:09,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-06-04 00:41:10,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-06-04 00:41:10,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-04 00:41:11,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:41:11,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-04 00:41:12,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-04 00:41:12,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:41:12,472 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-06-04 00:41:12,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-06-04 00:41:13,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-04 00:41:13,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:41:14,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-04 00:41:14,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-04 00:41:15,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:41:15,255 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-06-04 00:41:15,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543 HTTP/1.1" 200 None 2024-06-04 00:41:16,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543/comments HTTP/1.1" 200 None 2024-06-04 00:41:16,226 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:41:16,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-04 00:41:16,227 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:16,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:16,233 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:41:16,240 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:41:16,240 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:41:16,248 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:41:16,256 [ scc.git] DEBUG Already up to date. 2024-06-04 00:41:16,256 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-06-04 00:41:17,043 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-04 00:41:17,044 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-06-04 00:41:17,049 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-06-04 00:41:17,772 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-04 00:41:17,772 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-06-04 00:41:17,778 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head' 2024-06-04 00:41:18,984 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-04 00:41:18,985 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD 2024-06-04 00:41:18,992 [ scc.git] DEBUG Calling 'git fetch origin pull/562/head' 2024-06-04 00:41:19,384 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-04 00:41:19,384 [ scc.git] DEBUG * branch refs/pull/562/head -> FETCH_HEAD 2024-06-04 00:41:19,389 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:41:19,389 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:19,389 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:19,395 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-04 00:41:19,403 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:19,409 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-04 00:41:19,523 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:41:19,529 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-06-04 00:41:19,529 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-06-04 00:41:19,529 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-06-04 00:41:19,529 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-06-04 00:41:19,529 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-06-04 00:41:19,529 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-06-04 00:41:19,529 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-06-04 00:41:19,529 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-06-04 00:41:19,529 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++ 2024-06-04 00:41:19,529 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-) 2024-06-04 00:41:19,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:41:19,690 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-04 00:41:19,701 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:19,707 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-04 00:41:19,963 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-06-04 00:41:19,963 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-06-04 00:41:19,963 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-06-04 00:41:19,963 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:41:19,971 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-06-04 00:41:19,971 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-06-04 00:41:19,971 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-06-04 00:41:19,971 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-06-04 00:41:19,971 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-06-04 00:41:19,971 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-06-04 00:41:19,971 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-06-04 00:41:19,971 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-06-04 00:41:19,971 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-06-04 00:41:19,974 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-06-04 00:41:19,974 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-06-04 00:41:19,974 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-06-04 00:41:20,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:41:20,137 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b7cad07be139b0ba61a8d0fc2bf3033f90909569' 2024-06-04 00:41:20,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:20,150 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (Max projection bytes) b7cad07be139b0ba61a8d0fc2bf3033f90909569' 2024-06-04 00:41:20,447 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-06-04 00:41:20,447 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-06-04 00:41:20,447 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2024-06-04 00:41:20,447 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-06-04 00:41:20,447 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-06-04 00:41:20,448 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:41:20,456 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 24 +++++++-- 2024-06-04 00:41:20,456 [ scc.git] DEBUG omero_figure/urls.py | 8 +++ 2024-06-04 00:41:20,456 [ scc.git] DEBUG omero_figure/views.py | 58 ++++++++++++++++++++++ 2024-06-04 00:41:20,456 [ scc.git] DEBUG src/css/figure.css | 5 -- 2024-06-04 00:41:20,456 [ scc.git] DEBUG src/index.html | 1 + 2024-06-04 00:41:20,456 [ scc.git] DEBUG src/js/models/figure_model.js | 29 ++++++++++- 2024-06-04 00:41:20,456 [ scc.git] DEBUG src/js/models/panel_model.js | 29 ++++++++++- 2024-06-04 00:41:20,456 [ scc.git] DEBUG src/js/views/info_panel_view.js | 3 +- 2024-06-04 00:41:20,456 [ scc.git] DEBUG src/js/views/modal_views.js | 2 + 2024-06-04 00:41:20,456 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2024-06-04 00:41:20,456 [ scc.git] DEBUG src/js/views/right_panel_view.js | 5 ++ 2024-06-04 00:41:20,456 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 3 +- 2024-06-04 00:41:20,458 [ scc.git] DEBUG src/templates/image_display_options.template.html | 4 +- 2024-06-04 00:41:20,458 [ scc.git] DEBUG src/templates/info_panel.template.html | 2 + 2024-06-04 00:41:20,458 [ scc.git] DEBUG 14 files changed, 161 insertions(+), 14 deletions(-) 2024-06-04 00:41:20,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:41:20,615 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0c814d66251860ddb01c00ade8469e45f7a1be23' 2024-06-04 00:41:20,623 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:20,629 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 562 (Add changelog 7.0.0) 0c814d66251860ddb01c00ade8469e45f7a1be23' 2024-06-04 00:41:20,655 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:41:20,658 [ scc.git] DEBUG CHANGELOG.md | 10 ++++++++++ 2024-06-04 00:41:20,658 [ scc.git] DEBUG 1 file changed, 10 insertions(+) 2024-06-04 00:41:21,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:41:21,029 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:41:21,074 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:21,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:21,081 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:41:21,120 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:41:21,130 [ scc.git] DEBUG has no local changes 2024-06-04 00:41:21,130 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 562 will-moore 'Add changelog 7.0.0' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:41:21,310 [ scc.git] DEBUG [detached HEAD 7699d3d5] merge master -Dorg -Ssuccess-only 2024-06-04 00:41:21,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:41:21,311 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:41:21,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-06-04 00:41:22,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-06-04 00:41:22,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-06-04 00:41:22,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-04 00:41:23,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:41:23,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-04 00:41:24,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:41:24,273 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-06-04 00:41:24,273 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:41:24,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-04 00:41:24,273 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:24,273 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:24,279 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:41:24,284 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:41:24,285 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:41:24,290 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:41:24,296 [ scc.git] DEBUG Already up to date. 2024-06-04 00:41:24,296 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-06-04 00:41:24,718 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-06-04 00:41:24,719 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-06-04 00:41:24,723 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:41:24,723 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:24,723 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:24,728 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-04 00:41:24,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:24,740 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-04 00:41:24,774 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-06-04 00:41:24,774 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:41:24,777 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-06-04 00:41:24,777 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-06-04 00:41:24,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:41:24,953 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:41:24,997 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:24,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:25,003 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:41:25,046 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:41:25,052 [ scc.git] DEBUG has no local changes 2024-06-04 00:41:25,053 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:41:25,061 [ scc.git] DEBUG [detached HEAD 0c0cadb] merge master -Dorg -Ssuccess-only 2024-06-04 00:41:25,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:41:25,062 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:41:25,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-06-04 00:41:25,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-06-04 00:41:25,897 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-04 00:41:26,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-04 00:41:26,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:41:27,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-04 00:41:27,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-04 00:41:28,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:41:28,243 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-04 00:41:28,243 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:41:28,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-04 00:41:28,243 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:28,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:28,249 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:41:28,255 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:41:28,256 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:41:28,262 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:41:28,268 [ scc.git] DEBUG Already up to date. 2024-06-04 00:41:28,268 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-06-04 00:41:28,646 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-06-04 00:41:28,646 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-06-04 00:41:28,651 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:41:28,651 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:28,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:28,657 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-04 00:41:28,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:28,667 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-04 00:41:28,678 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:41:28,682 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-06-04 00:41:28,682 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-06-04 00:41:28,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:41:28,843 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:41:28,885 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:28,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:28,890 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:41:28,930 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:41:28,938 [ scc.git] DEBUG has no local changes 2024-06-04 00:41:28,938 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:41:28,949 [ scc.git] DEBUG [detached HEAD 77899de] merge master -Dorg -Ssuccess-only 2024-06-04 00:41:28,949 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:41:28,949 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:41:29,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-06-04 00:41:29,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-06-04 00:41:30,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-06-04 00:41:30,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-04 00:41:31,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:41:31,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-04 00:41:32,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-04 00:41:32,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:41:32,662 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-04 00:41:33,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-06-04 00:41:33,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-06-04 00:41:34,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-04 00:41:34,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:41:34,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-04 00:41:35,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-04 00:41:35,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:41:35,896 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-06-04 00:41:36,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-06-04 00:41:36,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-06-04 00:41:37,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-04 00:41:37,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:41:38,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-04 00:41:38,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:41:38,566 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-06-04 00:41:38,567 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:41:38,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-04 00:41:38,567 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:38,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:38,579 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:41:38,589 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:41:38,590 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:41:38,602 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:41:38,613 [ scc.git] DEBUG Already up to date. 2024-06-04 00:41:38,614 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-06-04 00:41:39,137 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-04 00:41:39,137 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-06-04 00:41:39,142 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-06-04 00:41:39,543 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-04 00:41:39,543 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-06-04 00:41:39,551 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-06-04 00:41:40,055 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-04 00:41:40,056 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-06-04 00:41:40,062 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:41:40,062 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:40,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:40,068 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-04 00:41:40,076 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:40,082 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-04 00:41:40,149 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-06-04 00:41:40,150 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:41:40,153 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-06-04 00:41:40,153 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-06-04 00:41:40,153 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-06-04 00:41:40,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:41:40,307 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-04 00:41:40,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:40,322 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-04 00:41:40,473 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-06-04 00:41:40,474 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-06-04 00:41:40,474 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-06-04 00:41:40,474 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-06-04 00:41:40,474 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:41:40,479 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-06-04 00:41:40,479 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-06-04 00:41:40,479 [ scc.git] DEBUG src/app/header.html | 5 + 2024-06-04 00:41:40,479 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-06-04 00:41:40,479 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-06-04 00:41:40,479 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-06-04 00:41:40,479 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-06-04 00:41:40,479 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-06-04 00:41:40,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:41:40,722 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-04 00:41:40,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:40,740 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-04 00:41:40,757 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-06-04 00:41:40,758 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:41:40,762 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-06-04 00:41:40,762 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-06-04 00:41:40,762 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-06-04 00:41:41,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:41:41,143 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:41:41,200 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:41,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:41,209 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:41:41,259 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:41:41,271 [ scc.git] DEBUG has no local changes 2024-06-04 00:41:41,272 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:41:41,286 [ scc.git] DEBUG [detached HEAD cd05d74] merge master -Dorg -Ssuccess-only 2024-06-04 00:41:41,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:41:41,287 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:41:41,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-06-04 00:41:42,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-06-04 00:41:42,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-06-04 00:41:43,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-04 00:41:43,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:41:44,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-04 00:41:44,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-04 00:41:45,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:41:45,032 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-06-04 00:41:45,033 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:41:45,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-04 00:41:45,033 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:45,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:45,041 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:41:45,049 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:41:45,049 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:41:45,059 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:41:45,067 [ scc.git] DEBUG Already up to date. 2024-06-04 00:41:45,067 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-06-04 00:41:45,472 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-06-04 00:41:45,472 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-06-04 00:41:45,478 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:41:45,478 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:45,478 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:45,485 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-04 00:41:45,493 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:45,501 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-04 00:41:45,513 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:41:45,516 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-06-04 00:41:45,517 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-06-04 00:41:45,519 [ scc.git] DEBUG requirements.txt | 2 +- 2024-06-04 00:41:45,519 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-06-04 00:41:45,519 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-06-04 00:41:45,520 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-06-04 00:41:45,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:41:45,699 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:41:45,751 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:45,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:45,758 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:41:45,798 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:41:45,805 [ scc.git] DEBUG has no local changes 2024-06-04 00:41:45,806 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:41:45,816 [ scc.git] DEBUG [detached HEAD 7a6fc2f] merge master -Dorg -Ssuccess-only 2024-06-04 00:41:45,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:41:45,817 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:41:46,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-06-04 00:41:46,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-06-04 00:41:47,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-06-04 00:41:47,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-04 00:41:48,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:41:48,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-04 00:41:49,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:41:49,090 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-04 00:41:49,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-06-04 00:41:50,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-06-04 00:41:50,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-04 00:41:50,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:41:51,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-04 00:41:51,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:41:51,837 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-04 00:41:51,837 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:41:51,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-04 00:41:51,837 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:51,838 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:51,845 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:41:51,851 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:41:51,852 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:41:51,859 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:41:51,865 [ scc.git] DEBUG Already up to date. 2024-06-04 00:41:51,866 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-06-04 00:41:52,409 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-04 00:41:52,409 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-06-04 00:41:52,415 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-04 00:41:52,997 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-04 00:41:52,997 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-04 00:41:53,004 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:41:53,004 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:53,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:53,012 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-04 00:41:53,026 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:53,036 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-04 00:41:53,085 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-06-04 00:41:53,086 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-06-04 00:41:53,086 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-04 00:41:53,086 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-04 00:41:53,087 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-04 00:41:53,088 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-04 00:41:53,095 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-04 00:41:53,104 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-04 00:41:53,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:41:53,266 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-04 00:41:53,274 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-04 00:41:53,282 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-06-04 00:41:53,289 [ scc.config] DEBUG Found github.token 2024-06-04 00:41:53,289 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-06-04 00:41:53,289 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-04 00:41:53,297 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:53,304 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-04 00:41:53,347 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-04 00:41:53,348 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-04 00:41:53,348 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-06-04 00:41:53,348 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-04 00:41:53,348 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-04 00:41:53,357 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-04 00:41:53,365 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-04 00:41:53,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:41:53,680 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-04 00:41:53,688 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-04 00:41:53,693 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-06-04 00:41:53,697 [ scc.config] DEBUG Found github.token 2024-06-04 00:41:53,698 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-06-04 00:41:53,698 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:41:53,736 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:41:53,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:41:53,744 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:41:53,782 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:41:53,790 [ scc.git] DEBUG has no local changes 2024-06-04 00:41:53,791 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:41:53,800 [ scc.git] DEBUG [detached HEAD 5e86524] merge master -Dorg -Ssuccess-only 2024-06-04 00:41:53,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:41:53,801 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:41:54,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-06-04 00:41:54,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-06-04 00:41:54,659 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-04 00:41:55,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-04 00:41:55,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:41:56,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-04 00:41:56,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-04 00:41:57,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:41:57,035 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-04 00:41:57,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-06-04 00:41:57,490 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-04 00:41:57,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-04 00:41:58,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:41:58,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-04 00:41:59,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-04 00:41:59,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:41:59,853 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-04 00:42:00,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-06-04 00:42:00,317 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-04 00:42:00,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-04 00:42:01,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:42:01,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-04 00:42:02,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-04 00:42:02,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:42:02,760 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-04 00:42:03,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-06-04 00:42:03,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-06-04 00:42:04,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-06-04 00:42:04,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-06-04 00:42:05,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-06-04 00:42:05,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-06-04 00:42:05,752 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:42:05,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-04 00:42:05,752 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:05,752 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:05,760 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:42:05,766 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:42:05,767 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:42:05,774 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:42:05,781 [ scc.git] DEBUG Already up to date. 2024-06-04 00:42:05,782 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-06-04 00:42:06,174 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-04 00:42:06,174 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-06-04 00:42:06,178 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-06-04 00:42:06,562 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-04 00:42:06,562 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-06-04 00:42:06,567 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-06-04 00:42:06,941 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-04 00:42:06,941 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-06-04 00:42:06,945 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:42:06,946 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:06,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:06,952 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-04 00:42:06,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:06,965 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-04 00:42:06,976 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:42:06,980 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-06-04 00:42:06,980 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-06-04 00:42:07,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:07,145 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-04 00:42:07,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:07,156 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-04 00:42:07,206 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-04 00:42:07,206 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:42:07,210 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-06-04 00:42:07,210 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-06-04 00:42:07,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:07,569 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-04 00:42:07,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:07,580 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-04 00:42:07,659 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-04 00:42:07,660 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:42:07,663 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-06-04 00:42:07,664 [ scc.git] DEBUG package.json | 2 +- 2024-06-04 00:42:07,664 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-06-04 00:42:07,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:07,984 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:42:08,029 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:08,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:08,035 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:42:08,076 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:42:08,084 [ scc.git] DEBUG has no local changes 2024-06-04 00:42:08,084 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:42:08,094 [ scc.git] DEBUG [detached HEAD 9769327] merge master -Dorg -Ssuccess-only 2024-06-04 00:42:08,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:08,094 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:42:08,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-06-04 00:42:08,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-06-04 00:42:09,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-04 00:42:09,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:42:10,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-04 00:42:10,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:42:10,808 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-06-04 00:42:10,808 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:42:10,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-04 00:42:10,809 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:10,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:10,815 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:42:10,821 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:42:10,822 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:42:10,828 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:42:10,835 [ scc.git] DEBUG Already up to date. 2024-06-04 00:42:10,836 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-04 00:42:11,220 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-06-04 00:42:11,221 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-04 00:42:11,226 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:42:11,226 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:11,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:11,233 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-04 00:42:11,239 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:11,245 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-04 00:42:11,254 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:42:11,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:11,426 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:42:11,469 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:11,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:11,476 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:42:11,520 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:42:11,527 [ scc.git] DEBUG has no local changes 2024-06-04 00:42:11,527 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:42:11,536 [ scc.git] DEBUG [detached HEAD 140a2ea] merge master -Dorg -Ssuccess-only 2024-06-04 00:42:11,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:11,537 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:42:11,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-06-04 00:42:12,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-06-04 00:42:12,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-06-04 00:42:13,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-06-04 00:42:13,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-04 00:42:14,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:42:14,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-04 00:42:15,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:42:15,221 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-04 00:42:15,221 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:42:15,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-04 00:42:15,221 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:15,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:15,227 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:42:15,232 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:42:15,232 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:42:15,237 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:42:15,242 [ scc.git] DEBUG Already up to date. 2024-06-04 00:42:15,243 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-06-04 00:42:15,732 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-06-04 00:42:15,732 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-06-04 00:42:15,738 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:42:15,738 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:15,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:15,744 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-04 00:42:15,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:15,761 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-04 00:42:15,773 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-06-04 00:42:15,773 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:42:15,776 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-06-04 00:42:15,777 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-06-04 00:42:15,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:15,937 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:42:15,983 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:15,983 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:15,990 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:42:16,034 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:42:16,042 [ scc.git] DEBUG has no local changes 2024-06-04 00:42:16,043 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:42:16,055 [ scc.git] DEBUG [detached HEAD bf76a21] merge master -Dorg -Ssuccess-only 2024-06-04 00:42:16,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:16,056 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:42:16,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-06-04 00:42:16,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-06-04 00:42:17,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-06-04 00:42:17,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-04 00:42:18,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:42:18,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-04 00:42:19,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:42:19,134 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-04 00:42:19,135 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:42:19,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-04 00:42:19,135 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:19,135 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:19,143 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:42:19,150 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:42:19,151 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:42:19,158 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:42:19,165 [ scc.git] DEBUG Already up to date. 2024-06-04 00:42:19,165 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-04 00:42:19,587 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-06-04 00:42:19,587 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-04 00:42:19,592 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:42:19,592 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:19,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:19,598 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-04 00:42:19,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:19,612 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-04 00:42:19,667 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-06-04 00:42:19,667 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-06-04 00:42:19,667 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-06-04 00:42:19,667 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-06-04 00:42:19,667 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-06-04 00:42:19,667 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-06-04 00:42:19,667 [ scc.git] DEBUG Auto-merging setup.py 2024-06-04 00:42:19,667 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-06-04 00:42:19,667 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-04 00:42:19,667 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-04 00:42:19,674 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-04 00:42:19,681 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-04 00:42:19,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:19,862 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-04 00:42:19,869 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-04 00:42:19,875 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - setup.py - omero_signup/signup_settings.py - omero_signup/urls.py --conflicts 2024-06-04 00:42:19,880 [ scc.config] DEBUG Found github.token 2024-06-04 00:42:19,881 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-06-04 00:42:19,881 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:42:19,923 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:19,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:19,929 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:42:19,971 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:42:19,978 [ scc.git] DEBUG has no local changes 2024-06-04 00:42:19,978 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:42:19,988 [ scc.git] DEBUG [detached HEAD e121def] merge master -Dorg -Ssuccess-only 2024-06-04 00:42:19,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:19,989 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:42:20,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-06-04 00:42:20,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-06-04 00:42:21,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-06-04 00:42:21,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-04 00:42:22,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:42:22,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-04 00:42:23,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:42:23,081 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-04 00:42:23,081 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:42:23,081 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-04 00:42:23,082 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:23,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:23,088 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:42:23,094 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:42:23,094 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:42:23,101 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:42:23,107 [ scc.git] DEBUG Already up to date. 2024-06-04 00:42:23,107 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-06-04 00:42:23,590 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-06-04 00:42:23,590 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-06-04 00:42:23,595 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:42:23,595 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:23,596 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:23,604 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-06-04 00:42:23,613 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:23,619 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-06-04 00:42:23,660 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-04 00:42:23,663 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-06-04 00:42:23,664 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-06-04 00:42:23,664 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-06-04 00:42:23,664 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-06-04 00:42:23,664 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-06-04 00:42:23,667 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-06-04 00:42:23,667 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-06-04 00:42:23,667 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-06-04 00:42:23,667 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-06-04 00:42:23,667 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-06-04 00:42:23,667 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-06-04 00:42:23,667 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-06-04 00:42:23,667 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-06-04 00:42:23,668 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-06-04 00:42:23,668 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-06-04 00:42:23,668 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-06-04 00:42:23,668 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-06-04 00:42:23,668 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-06-04 00:42:23,668 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-06-04 00:42:23,668 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-06-04 00:42:23,668 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-06-04 00:42:23,668 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-06-04 00:42:23,668 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-06-04 00:42:23,668 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-06-04 00:42:23,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:23,835 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:42:23,878 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:23,879 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:23,886 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:42:23,928 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:42:23,935 [ scc.git] DEBUG has no local changes 2024-06-04 00:42:23,935 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:42:23,945 [ scc.git] DEBUG [detached HEAD b9940e5] merge master -Dorg -Ssuccess-only 2024-06-04 00:42:23,945 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:23,946 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:42:24,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-06-04 00:42:24,279 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:42:24,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-04 00:42:24,280 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:24,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:24,288 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:42:24,296 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:42:24,296 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:42:24,305 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:42:24,313 [ scc.git] DEBUG Already up to date. 2024-06-04 00:42:24,313 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:42:24,313 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:24,314 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:24,319 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:42:24,360 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:24,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:24,366 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:42:24,419 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:42:24,427 [ scc.git] DEBUG has no local changes 2024-06-04 00:42:24,428 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:42:24,438 [ scc.git] DEBUG [detached HEAD bc0f2e6] merge master -Dorg -Ssuccess-only 2024-06-04 00:42:24,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:24,439 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:42:24,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-06-04 00:42:24,712 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:42:24,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-04 00:42:24,712 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:24,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:24,720 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:42:24,728 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:42:24,728 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:42:24,736 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:42:24,744 [ scc.git] DEBUG Already up to date. 2024-06-04 00:42:24,744 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:42:24,744 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:24,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:24,752 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:42:24,795 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:24,795 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:24,802 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:42:24,848 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:42:24,857 [ scc.git] DEBUG has no local changes 2024-06-04 00:42:24,858 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:42:24,869 [ scc.git] DEBUG [detached HEAD 658de7f] merge master -Dorg -Ssuccess-only 2024-06-04 00:42:24,869 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:24,870 [ scc.git] INFO Overriding base-branch from master to main 2024-06-04 00:42:24,870 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:42:25,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-06-04 00:42:25,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-06-04 00:42:26,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-06-04 00:42:26,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-06-04 00:42:27,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-04 00:42:27,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:42:28,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-04 00:42:28,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-04 00:42:28,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:42:28,947 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-04 00:42:28,948 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:42:28,948 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-04 00:42:28,948 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:28,948 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:28,955 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-06-04 00:42:28,961 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:42:28,962 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-06-04 00:42:28,968 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-06-04 00:42:28,974 [ scc.git] DEBUG Already up to date. 2024-06-04 00:42:28,975 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-06-04 00:42:29,413 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-06-04 00:42:29,414 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-06-04 00:42:29,419 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:42:29,419 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:29,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:29,426 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-04 00:42:29,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:29,436 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-04 00:42:29,483 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-06-04 00:42:29,483 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-06-04 00:42:29,483 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-04 00:42:29,483 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-04 00:42:29,490 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-04 00:42:29,504 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-04 00:42:29,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:29,672 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-04 00:42:29,679 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-04 00:42:29,686 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-06-04 00:42:29,691 [ scc.config] DEBUG Found github.token 2024-06-04 00:42:29,691 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-06-04 00:42:29,691 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:42:29,738 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:29,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:29,745 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:42:29,788 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:42:29,795 [ scc.git] DEBUG has no local changes 2024-06-04 00:42:29,796 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:42:29,811 [ scc.git] DEBUG [detached HEAD ad86038] merge master -Dorg -Ssuccess-only 2024-06-04 00:42:29,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:29,812 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:42:30,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-06-04 00:42:30,100 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:42:30,100 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-04 00:42:30,100 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:30,100 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:30,110 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:42:30,118 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:42:30,119 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:42:30,127 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:42:30,135 [ scc.git] DEBUG Already up to date. 2024-06-04 00:42:30,135 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:42:30,135 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:30,135 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:30,142 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:42:30,189 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:30,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:30,196 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:42:30,241 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:42:30,248 [ scc.git] DEBUG has no local changes 2024-06-04 00:42:30,248 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:42:30,260 [ scc.git] DEBUG [detached HEAD 0809428] merge master -Dorg -Ssuccess-only 2024-06-04 00:42:30,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:30,261 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:42:30,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-06-04 00:42:30,539 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:42:30,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-04 00:42:30,539 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:30,539 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:30,549 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:42:30,559 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:42:30,560 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:42:30,570 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:42:30,580 [ scc.git] DEBUG Already up to date. 2024-06-04 00:42:30,581 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:42:30,581 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:30,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:30,588 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:42:30,644 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:30,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:30,659 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:42:30,709 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:42:30,718 [ scc.git] DEBUG has no local changes 2024-06-04 00:42:30,718 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:42:30,730 [ scc.git] DEBUG [detached HEAD b43f04f] merge master -Dorg -Ssuccess-only 2024-06-04 00:42:30,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:30,731 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:42:31,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-06-04 00:42:31,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-06-04 00:42:31,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-06-04 00:42:32,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-04 00:42:32,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:42:33,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-04 00:42:33,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:42:33,705 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-06-04 00:42:33,705 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:42:33,705 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-04 00:42:33,705 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:33,705 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:33,711 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-04 00:42:33,718 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:42:33,718 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-04 00:42:33,725 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-04 00:42:33,731 [ scc.git] DEBUG Already up to date. 2024-06-04 00:42:33,731 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-06-04 00:42:34,161 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-06-04 00:42:34,161 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-06-04 00:42:34,167 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:42:34,168 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:34,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:34,174 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-04 00:42:34,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:34,186 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-04 00:42:34,198 [ scc.git] DEBUG Auto-merging Dockerfile 2024-06-04 00:42:34,198 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-06-04 00:42:34,198 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-04 00:42:34,198 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-04 00:42:34,205 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-04 00:42:34,213 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-04 00:42:34,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:34,388 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-04 00:42:34,395 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-04 00:42:34,403 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-06-04 00:42:34,408 [ scc.config] DEBUG Found github.token 2024-06-04 00:42:34,409 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-06-04 00:42:34,409 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:42:34,448 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:34,448 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:34,454 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:42:34,492 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:42:34,500 [ scc.git] DEBUG has no local changes 2024-06-04 00:42:34,500 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:42:34,510 [ scc.git] DEBUG [detached HEAD 2107292] merge master -Dorg -Ssuccess-only 2024-06-04 00:42:34,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:34,510 [ scc.git] INFO Overriding base-branch from master to develop 2024-06-04 00:42:34,510 [ scc.repo] DEBUG ## PRs found: 2024-06-04 00:42:34,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-06-04 00:42:35,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-06-04 00:42:35,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-06-04 00:42:36,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-06-04 00:42:36,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-06-04 00:42:37,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-06-04 00:42:37,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-06-04 00:42:38,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-04 00:42:38,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-04 00:42:39,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-04 00:42:39,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-06-04 00:42:39,410 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-04 00:42:39,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-06-04 00:42:40,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-06-04 00:42:40,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-06-04 00:42:41,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-06-04 00:42:41,328 [ scc.repo] DEBUG ## Branches found: 2024-06-04 00:42:41,328 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-04 00:42:41,328 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:41,328 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:41,335 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-06-04 00:42:41,342 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-04 00:42:41,343 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-06-04 00:42:41,350 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-06-04 00:42:41,357 [ scc.git] DEBUG Already up to date. 2024-06-04 00:42:41,358 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-06-04 00:42:41,815 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-06-04 00:42:41,815 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-06-04 00:42:41,821 [ scc.git] DEBUG ## Unique users: [] 2024-06-04 00:42:41,821 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:41,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:41,829 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-04 00:42:41,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:41,842 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-04 00:42:41,946 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-06-04 00:42:41,946 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-06-04 00:42:41,946 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-04 00:42:41,946 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-04 00:42:41,952 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a' 2024-06-04 00:42:41,959 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-06-04 00:42:42,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:42,120 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-04 00:42:42,128 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a' 2024-06-04 00:42:42,134 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-06-04 00:42:42,139 [ scc.config] DEBUG Found github.token 2024-06-04 00:42:42,139 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-06-04 00:42:42,139 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-04 00:42:42,177 [ scc.git] DEBUG Get sha1 of %s 2024-06-04 00:42:42,177 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-04 00:42:42,182 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:42:42,222 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:42:42,229 [ scc.git] DEBUG has no local changes 2024-06-04 00:42:42,229 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:42:42,238 [ scc.git] DEBUG [detached HEAD 938524d] merge master -Dorg -Ssuccess-only 2024-06-04 00:42:42,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:42,239 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-04 00:42:42,315 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-06-04 00:42:42,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:42,530 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-06-04 00:42:42,535 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-06-04 00:42:42,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:42,954 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-06-04 00:42:42,963 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-06-04 00:42:43,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:43,370 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-06-04 00:42:43,375 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-06-04 00:42:43,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:43,789 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-06-04 00:42:44,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:44,205 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-06-04 00:42:44,212 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-06-04 00:42:44,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:44,625 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-06-04 00:42:44,632 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-06-04 00:42:45,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:45,037 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-06-04 00:42:45,046 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-06-04 00:42:45,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:45,445 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-06-04 00:42:45,452 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-06-04 00:42:45,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:45,846 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-06-04 00:42:45,852 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-06-04 00:42:46,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:46,258 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-06-04 00:42:46,266 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-06-04 00:42:46,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:46,674 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-06-04 00:42:46,681 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-06-04 00:42:47,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:47,117 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-06-04 00:42:47,126 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-06-04 00:42:47,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:47,523 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-06-04 00:42:47,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:47,927 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-06-04 00:42:48,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:48,330 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-06-04 00:42:48,335 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-06-04 00:42:48,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:48,753 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-06-04 00:42:49,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:49,173 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-06-04 00:42:49,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:49,594 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-06-04 00:42:49,600 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-06-04 00:42:49,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:50,015 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-06-04 00:42:50,021 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-06-04 00:42:50,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:50,428 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-06-04 00:42:50,434 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-06-04 00:42:50,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:50,849 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-06-04 00:42:50,854 [ scc.config] DEBUG Found submodule.scripts.url 2024-06-04 00:42:51,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-04 00:42:51,260 [ scc.config] DEBUG Found submodule.scripts.branch 2024-06-04 00:42:51,260 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-04 00:42:51,339 [ scc.git] DEBUG has local changes 2024-06-04 00:42:51,340 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 562 will-moore 'Add changelog 7.0.0' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2024-06-04 00:42:51,359 [ scc.git] DEBUG [detached HEAD 22d9191] merge master -Dorg -Ssuccess-only 2024-06-04 00:42:51,360 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-04 00:42:51,360 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-06-04 00:42:51,360 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,360 [ scc.merge] INFO 2024-06-04 00:42:51,360 [ scc.merge] INFO Merged PRs: 2024-06-04 00:42:51,360 [ scc.merge] INFO - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-04 00:42:51,360 [ scc.merge] INFO 2024-06-04 00:42:51,360 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-06-04 00:42:51,360 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,361 [ scc.merge] INFO 2024-06-04 00:42:51,361 [ scc.merge] INFO 2024-06-04 00:42:51,361 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-06-04 00:42:51,361 [ scc.merge] INFO Excluded PRs: 2024-06-04 00:42:51,361 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-06-04 00:42:51,361 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,361 [ scc.merge] INFO 2024-06-04 00:42:51,361 [ scc.merge] INFO Merged PRs: 2024-06-04 00:42:51,361 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-06-04 00:42:51,361 [ scc.merge] INFO 2024-06-04 00:42:51,361 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-06-04 00:42:51,361 [ scc.merge] INFO Excluded PRs: 2024-06-04 00:42:51,361 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-06-04 00:42:51,361 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-06-04 00:42:51,361 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-06-04 00:42:51,361 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-06-04 00:42:51,361 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,361 [ scc.merge] INFO 2024-06-04 00:42:51,362 [ scc.merge] INFO Merged PRs: 2024-06-04 00:42:51,362 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-06-04 00:42:51,362 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency' 2024-06-04 00:42:51,362 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-04 00:42:51,362 [ scc.merge] INFO 2024-06-04 00:42:51,362 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-06-04 00:42:51,362 [ scc.merge] INFO Excluded PRs: 2024-06-04 00:42:51,362 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-04 00:42:51,362 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-06-04 00:42:51,362 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,362 [ scc.merge] INFO 2024-06-04 00:42:51,362 [ scc.merge] INFO Merged PRs: 2024-06-04 00:42:51,362 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-06-04 00:42:51,362 [ scc.merge] INFO 2024-06-04 00:42:51,362 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-04 00:42:51,362 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-06-04 00:42:51,362 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-04 00:42:51,362 [ scc.merge] INFO 2024-06-04 00:42:51,363 [ scc.merge] INFO Repository: ome/omero-figure 2024-06-04 00:42:51,363 [ scc.merge] INFO Excluded PRs: 2024-06-04 00:42:51,363 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (stage: draft) 2024-06-04 00:42:51,363 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,363 [ scc.merge] INFO 2024-06-04 00:42:51,363 [ scc.merge] INFO Merged PRs: 2024-06-04 00:42:51,363 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-06-04 00:42:51,363 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-06-04 00:42:51,363 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' 2024-06-04 00:42:51,363 [ scc.merge] INFO - PR 562 will-moore 'Add changelog 7.0.0' 2024-06-04 00:42:51,363 [ scc.merge] INFO 2024-06-04 00:42:51,363 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-06-04 00:42:51,363 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,363 [ scc.merge] INFO 2024-06-04 00:42:51,363 [ scc.merge] INFO Merged PRs: 2024-06-04 00:42:51,363 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-06-04 00:42:51,363 [ scc.merge] INFO 2024-06-04 00:42:51,363 [ scc.merge] INFO Repository: ome/omero-gallery 2024-06-04 00:42:51,363 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,364 [ scc.merge] INFO 2024-06-04 00:42:51,364 [ scc.merge] INFO Merged PRs: 2024-06-04 00:42:51,364 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-04 00:42:51,364 [ scc.merge] INFO 2024-06-04 00:42:51,364 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-06-04 00:42:51,364 [ scc.merge] INFO Excluded PRs: 2024-06-04 00:42:51,364 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-06-04 00:42:51,364 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-06-04 00:42:51,364 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,364 [ scc.merge] INFO 2024-06-04 00:42:51,364 [ scc.merge] INFO Merged PRs: 2024-06-04 00:42:51,364 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-06-04 00:42:51,364 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-06-04 00:42:51,364 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-04 00:42:51,364 [ scc.merge] INFO 2024-06-04 00:42:51,364 [ scc.merge] INFO Repository: ome/omero-mapr 2024-06-04 00:42:51,364 [ scc.merge] INFO Excluded PRs: 2024-06-04 00:42:51,364 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-06-04 00:42:51,365 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,365 [ scc.merge] INFO 2024-06-04 00:42:51,365 [ scc.merge] INFO Merged PRs: 2024-06-04 00:42:51,365 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-06-04 00:42:51,365 [ scc.merge] INFO 2024-06-04 00:42:51,365 [ scc.merge] INFO Repository: ome/omero-metadata 2024-06-04 00:42:51,365 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,365 [ scc.merge] INFO 2024-06-04 00:42:51,365 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-04 00:42:51,365 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-04 00:42:51,365 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-04 00:42:51,365 [ scc.merge] INFO 2024-06-04 00:42:51,365 [ scc.merge] INFO Repository: ome/omero-parade 2024-06-04 00:42:51,365 [ scc.merge] INFO Excluded PRs: 2024-06-04 00:42:51,365 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-06-04 00:42:51,365 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-06-04 00:42:51,365 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-06-04 00:42:51,365 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,365 [ scc.merge] INFO 2024-06-04 00:42:51,366 [ scc.merge] INFO Merged PRs: 2024-06-04 00:42:51,366 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-04 00:42:51,366 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-04 00:42:51,366 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-04 00:42:51,366 [ scc.merge] INFO 2024-06-04 00:42:51,366 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-06-04 00:42:51,366 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,366 [ scc.merge] INFO 2024-06-04 00:42:51,366 [ scc.merge] INFO Merged PRs: 2024-06-04 00:42:51,366 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-06-04 00:42:51,366 [ scc.merge] INFO 2024-06-04 00:42:51,366 [ scc.merge] INFO Repository: ome/omero-rois 2024-06-04 00:42:51,366 [ scc.merge] INFO Excluded PRs: 2024-06-04 00:42:51,366 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-04 00:42:51,366 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,366 [ scc.merge] INFO 2024-06-04 00:42:51,366 [ scc.merge] INFO Merged PRs: 2024-06-04 00:42:51,366 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-04 00:42:51,366 [ scc.merge] INFO 2024-06-04 00:42:51,367 [ scc.merge] INFO Repository: ome/omero-signup 2024-06-04 00:42:51,367 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,367 [ scc.merge] INFO 2024-06-04 00:42:51,367 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-04 00:42:51,367 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-04 00:42:51,367 [ scc.merge] INFO 2024-06-04 00:42:51,367 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-06-04 00:42:51,367 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,367 [ scc.merge] INFO 2024-06-04 00:42:51,367 [ scc.merge] INFO Merged PRs: 2024-06-04 00:42:51,367 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-04 00:42:51,367 [ scc.merge] INFO 2024-06-04 00:42:51,367 [ scc.merge] INFO Repository: ome/omero-upload 2024-06-04 00:42:51,367 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,367 [ scc.merge] INFO 2024-06-04 00:42:51,367 [ scc.merge] INFO 2024-06-04 00:42:51,367 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-06-04 00:42:51,367 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,367 [ scc.merge] INFO 2024-06-04 00:42:51,368 [ scc.merge] INFO 2024-06-04 00:42:51,368 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-06-04 00:42:51,368 [ scc.merge] INFO Excluded PRs: 2024-06-04 00:42:51,368 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-06-04 00:42:51,368 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,368 [ scc.merge] INFO 2024-06-04 00:42:51,368 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-04 00:42:51,368 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-04 00:42:51,368 [ scc.merge] INFO 2024-06-04 00:42:51,368 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-06-04 00:42:51,368 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,368 [ scc.merge] INFO 2024-06-04 00:42:51,368 [ scc.merge] INFO 2024-06-04 00:42:51,368 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-06-04 00:42:51,368 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,368 [ scc.merge] INFO 2024-06-04 00:42:51,368 [ scc.merge] INFO 2024-06-04 00:42:51,368 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-06-04 00:42:51,368 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,368 [ scc.merge] INFO 2024-06-04 00:42:51,368 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-04 00:42:51,369 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-06-04 00:42:51,369 [ scc.merge] INFO 2024-06-04 00:42:51,369 [ scc.merge] INFO Repository: ome/scripts 2024-06-04 00:42:51,369 [ scc.merge] INFO Excluded PRs: 2024-06-04 00:42:51,369 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-06-04 00:42:51,369 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-06-04 00:42:51,369 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-06-04 00:42:51,369 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-06-04 00:42:51,369 [ scc.merge] INFO Already up to date. 2024-06-04 00:42:51,369 [ scc.merge] INFO 2024-06-04 00:42:51,369 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-04 00:42:51,369 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-04 00:42:51,369 [ scc.merge] INFO 2024-06-04 00:42:51,369 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-04 00:42:51,369 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,381 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-04 00:42:51,381 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-04 00:42:51,392 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-04 00:42:51,399 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-04 00:42:51,405 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-04 00:42:51,413 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-04 00:42:51,419 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-04 00:42:51,425 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,431 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,431 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-04 00:42:51,431 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-04 00:42:51,437 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-04 00:42:51,443 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-04 00:42:51,449 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-04 00:42:51,456 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-04 00:42:51,462 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-04 00:42:51,469 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-04 00:42:51,475 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-04 00:42:51,481 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-04 00:42:51,487 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-04 00:42:51,493 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-04 00:42:51,499 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-04 00:42:51,506 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,513 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-04 00:42:51,513 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-04 00:42:51,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-04 00:42:51,519 [ scc.git] DEBUG Calling 'git remote' 2024-06-04 00:42:51,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 985863a] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 3d9e3b87 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7b7a637 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 5a90893 nothing to commit, working tree clean [detached HEAD 308ea40] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-04 00:43:42,525 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-04 00:43:51,555 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-04 00:43:53,949 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-04 00:43:58,515 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-04 00:44:44,911 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS