Started by upstream project "Trigger" build number 104 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 80 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.0.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.0.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.12.1-py3-none-any.whl.metadata (4.1 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.5-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (39 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.2.25-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached pyjwt-2.12.1-py3-none-any.whl (29 kB) Using cached cryptography-46.0.5-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (193 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2026.2.25-py3-none-any.whl (153 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2026.2.25 cffi-2.0.0 charset_normalizer-3.4.5 cryptography-46.0.5 future-1.0.0 idna-3.11 pycparser-3.0 pyjwt-2.12.1 pynacl-1.6.2 requests-2.32.5 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-03-14 00:37:48,079 [ scc.config] DEBUG Found github.token 2026-03-14 00:37:48,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-03-14 00:37:48,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:37:48,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:37:49,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-03-14 00:37:49,278 [ scc.gh] DEBUG 3967 remaining from 5000 (Reset at 01:03 2026-03-14 00:37:49,278 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:37:49,281 [ scc.git] DEBUG Check current status 2026-03-14 00:37:49,281 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:37:49,283 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-03-14 00:37:49,283 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:37:49,330 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-14 00:37:49,333 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-14 00:37:49,336 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-03-14 00:37:49,340 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-03-14 00:37:49,344 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-03-14 00:37:49,347 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-14 00:37:49,350 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-14 00:37:49,352 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-03-14 00:37:49,355 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-14 00:37:49,358 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-03-14 00:37:49,361 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-14 00:37:49,364 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-14 00:37:49,367 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-03-14 00:37:49,370 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-14 00:37:49,373 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-03-14 00:37:49,375 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-14 00:37:49,378 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-03-14 00:37:49,380 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-03-14 00:37:49,383 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-14 00:37:49,385 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-14 00:37:49,388 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-14 00:37:49,391 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-03-14 00:37:49,394 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:37:49,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-03-14 00:37:50,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:37:50,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:37:51,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:37:51,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:37:51,543 [ scc.git] DEBUG Resetting... 2026-03-14 00:37:51,543 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-03-14 00:37:51,551 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-03-14 00:37:51,551 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-03-14 00:37:51,654 [ scc.git] DEBUG Check current status 2026-03-14 00:37:51,654 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:37:51,656 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-03-14 00:37:51,656 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:37:51,701 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-14 00:37:51,704 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-14 00:37:51,707 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-03-14 00:37:51,710 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-03-14 00:37:51,714 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-03-14 00:37:51,717 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-14 00:37:51,720 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-14 00:37:51,722 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-03-14 00:37:51,725 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-14 00:37:51,728 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-03-14 00:37:51,731 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-14 00:37:51,734 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-14 00:37:51,737 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-03-14 00:37:51,740 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-14 00:37:51,743 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-03-14 00:37:51,746 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-14 00:37:51,748 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-03-14 00:37:51,751 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-03-14 00:37:51,753 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-14 00:37:51,756 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-14 00:37:51,759 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-14 00:37:51,762 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-03-14 00:37:51,763 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-03-14 00:37:51,763 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-03-14 00:37:51,763 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-03-14 00:37:51,763 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-03-14 00:37:51,763 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-03-14 00:37:51,763 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:37:52,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-03-14 00:37:52,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-03-14 00:37:52,618 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:37:52,618 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-14 00:37:53,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-03-14 00:37:53,144 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:37:53,144 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-14 00:37:53,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-03-14 00:37:53,690 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:37:53,690 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-14 00:37:53,690 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:37:53,690 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:37:53,690 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:37:53,692 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:37:53,695 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:37:53,695 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:37:53,697 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:37:53,700 [ scc.git] DEBUG Already up to date. 2026-03-14 00:37:53,700 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-03-14 00:37:53,975 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-14 00:37:53,975 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-03-14 00:37:53,979 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-03-14 00:37:54,242 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-14 00:37:54,242 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-03-14 00:37:54,246 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-03-14 00:37:54,518 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-14 00:37:54,518 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-03-14 00:37:54,522 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:37:54,522 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:37:54,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:37:54,524 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-14 00:37:54,526 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:37:54,528 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-14 00:37:54,542 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:37:54,545 [ scc.git] DEBUG scripts | 2 +- 2026-03-14 00:37:54,545 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-14 00:37:54,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:37:54,725 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-14 00:37:54,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:37:54,730 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-14 00:37:54,744 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:37:54,747 [ scc.git] DEBUG omero-figure | 2 +- 2026-03-14 00:37:54,747 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-14 00:37:55,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:37:55,157 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-14 00:37:55,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:37:55,162 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-14 00:37:55,177 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:37:55,179 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-03-14 00:37:55,179 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-14 00:37:55,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:37:55,601 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:37:55,665 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-03-14 00:37:55,687 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-03-14 00:37:55,701 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-03-14 00:37:55,701 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:37:55,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:37:55,704 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:37:55,781 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0333d24d90> has no local changes 2026-03-14 00:37:55,781 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:37:55,852 [ scc.git] DEBUG [detached HEAD 52db6bf] merge master -Dorg -Snone 2026-03-14 00:37:55,853 [ scc.merge] INFO Repository: ome/omero-plugins 2026-03-14 00:37:55,853 [ scc.merge] INFO Already up to date. 2026-03-14 00:37:55,853 [ scc.merge] INFO 2026-03-14 00:37:55,853 [ scc.merge] INFO Merged PRs: 2026-03-14 00:37:55,853 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-14 00:37:55,853 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-14 00:37:55,853 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-14 00:37:55,853 [ scc.merge] INFO 2026-03-14 00:37:55,853 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-03-14 00:37:55,853 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' Submodule path 'omero-figure': checked out 'acada9be0cc8759f88dbfd89e8f1f7d69955749c' Submodule path 'omero-iviewer': checked out '5e2de43ad401fb00690a79644056e0ac15fabfd5' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-03-14 00:38:04,647 [ scc.config] DEBUG Found github.token 2026-03-14 00:38:04,648 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-03-14 00:38:04,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:38:05,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:38:05,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-03-14 00:38:05,676 [ scc.gh] DEBUG 3958 remaining from 5000 (Reset at 01:03 2026-03-14 00:38:05,676 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:05,679 [ scc.git] DEBUG Check current status 2026-03-14 00:38:05,679 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:05,681 [ scc.git] DEBUG 52db6bf merge master -Dorg -Snone 2026-03-14 00:38:05,681 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:05,730 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-14 00:38:05,733 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-14 00:38:05,736 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-03-14 00:38:05,739 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-03-14 00:38:05,743 [ scc.git] DEBUG +acada9be0cc8759f88dbfd89e8f1f7d69955749c omero-figure (v7.4.1-1-gacada9be) 2026-03-14 00:38:05,746 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-14 00:38:05,749 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-14 00:38:05,752 [ scc.git] DEBUG +5e2de43ad401fb00690a79644056e0ac15fabfd5 omero-iviewer (v0.16.0-20-g5e2de43) 2026-03-14 00:38:05,755 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-14 00:38:05,757 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-03-14 00:38:05,760 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-14 00:38:05,763 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-14 00:38:05,766 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-03-14 00:38:05,769 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-14 00:38:05,772 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-03-14 00:38:05,775 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-14 00:38:05,777 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-03-14 00:38:05,780 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-03-14 00:38:05,783 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-14 00:38:05,785 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-14 00:38:05,788 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-14 00:38:05,792 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-03-14 00:38:05,795 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:05,795 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-03-14 00:38:05,796 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-03-14 00:38:06,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-03-14 00:38:06,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:07,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:07,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:07,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:07,903 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:07,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-03-14 00:38:07,978 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:07,980 [ scc.git] DEBUG Check current status 2026-03-14 00:38:07,980 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:07,983 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-03-14 00:38:07,983 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:08,022 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:08,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-03-14 00:38:08,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:09,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:09,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:10,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:10,079 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:10,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:10,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-03-14 00:38:10,119 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:10,121 [ scc.git] DEBUG Check current status 2026-03-14 00:38:10,121 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:10,123 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-03-14 00:38:10,123 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:10,163 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:10,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-03-14 00:38:11,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:11,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:11,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:12,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:12,360 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:12,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:12,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-03-14 00:38:12,399 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:12,401 [ scc.git] DEBUG Check current status 2026-03-14 00:38:12,401 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:12,403 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-03-14 00:38:12,403 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:12,443 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:12,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-03-14 00:38:13,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:13,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:14,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:14,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:14,549 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:14,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:14,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-03-14 00:38:14,588 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:14,590 [ scc.git] DEBUG Check current status 2026-03-14 00:38:14,590 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:14,593 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-14 00:38:14,593 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:14,633 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:15,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-03-14 00:38:15,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:15,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:16,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:16,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:16,777 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:16,815 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:16,815 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-03-14 00:38:16,815 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:16,817 [ scc.git] DEBUG Check current status 2026-03-14 00:38:16,817 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:16,820 [ scc.git] DEBUG acada9be Bump version: 7.4.1 → 7.4.2.dev0 2026-03-14 00:38:16,820 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:16,859 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:17,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-03-14 00:38:17,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:18,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:18,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:18,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:19,000 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:19,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:19,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-03-14 00:38:19,039 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:19,041 [ scc.git] DEBUG Check current status 2026-03-14 00:38:19,041 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:19,043 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-03-14 00:38:19,044 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:19,084 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:19,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-03-14 00:38:20,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:20,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:20,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:21,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:21,295 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:21,334 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:21,334 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-03-14 00:38:21,334 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:21,336 [ scc.git] DEBUG Check current status 2026-03-14 00:38:21,336 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:21,338 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-03-14 00:38:21,339 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:21,376 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:21,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-03-14 00:38:22,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:22,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:23,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:23,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:23,531 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:23,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:23,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-03-14 00:38:23,569 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:23,571 [ scc.git] DEBUG Check current status 2026-03-14 00:38:23,571 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:23,574 [ scc.git] DEBUG 5e2de43 Merge pull request #510 from joshmoore/issue-509 2026-03-14 00:38:23,574 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:23,612 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:24,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-03-14 00:38:24,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:24,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:25,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:25,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:25,794 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:25,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:25,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-03-14 00:38:25,833 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:25,835 [ scc.git] DEBUG Check current status 2026-03-14 00:38:25,835 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:25,837 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-03-14 00:38:25,838 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:25,876 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:26,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-03-14 00:38:26,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:27,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:27,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:27,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:27,997 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:28,036 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:28,036 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-03-14 00:38:28,036 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:28,038 [ scc.git] DEBUG Check current status 2026-03-14 00:38:28,038 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:28,040 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-03-14 00:38:28,040 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:28,078 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:28,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-03-14 00:38:28,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:29,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:29,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:30,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:30,229 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:30,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:30,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-03-14 00:38:30,267 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:30,269 [ scc.git] DEBUG Check current status 2026-03-14 00:38:30,269 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:30,271 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-03-14 00:38:30,272 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:30,311 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:30,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-03-14 00:38:31,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:31,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:32,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:32,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:32,449 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:32,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:32,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-03-14 00:38:32,488 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:32,490 [ scc.git] DEBUG Check current status 2026-03-14 00:38:32,490 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:32,492 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-03-14 00:38:32,493 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:32,530 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:33,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-03-14 00:38:33,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:33,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:34,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:34,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:34,783 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:34,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:34,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-03-14 00:38:34,820 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:34,822 [ scc.git] DEBUG Check current status 2026-03-14 00:38:34,822 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:34,825 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-03-14 00:38:34,825 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:34,863 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:35,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-03-14 00:38:35,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:36,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:36,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:36,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:36,991 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:37,029 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:37,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-03-14 00:38:37,030 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:37,032 [ scc.git] DEBUG Check current status 2026-03-14 00:38:37,032 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:37,034 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-03-14 00:38:37,035 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:37,072 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:37,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-03-14 00:38:37,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:38,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:38,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:39,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:39,252 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:39,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:39,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-03-14 00:38:39,290 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:39,292 [ scc.git] DEBUG Check current status 2026-03-14 00:38:39,292 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:39,294 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-03-14 00:38:39,295 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:39,333 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:39,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-03-14 00:38:39,684 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-03-14 00:38:40,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-03-14 00:38:40,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:40,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:41,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:41,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:41,727 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:41,766 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:41,766 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-03-14 00:38:41,766 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:41,768 [ scc.git] DEBUG Check current status 2026-03-14 00:38:41,768 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:41,770 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-03-14 00:38:41,771 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:41,809 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:42,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-03-14 00:38:42,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:43,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:43,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:43,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:43,922 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:43,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:43,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-03-14 00:38:43,959 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:43,961 [ scc.git] DEBUG Check current status 2026-03-14 00:38:43,961 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:43,964 [ scc.git] DEBUG 160d894 Fix display of code 2026-03-14 00:38:43,964 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:44,004 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:44,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-03-14 00:38:44,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:45,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:45,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:46,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:46,147 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:46,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:46,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-03-14 00:38:46,187 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:46,189 [ scc.git] DEBUG Check current status 2026-03-14 00:38:46,189 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:46,191 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-03-14 00:38:46,191 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:46,229 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:46,230 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-03-14 00:38:46,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-03-14 00:38:47,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:47,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:47,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:48,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:48,401 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:48,439 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:48,440 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-03-14 00:38:48,440 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:48,442 [ scc.git] DEBUG Check current status 2026-03-14 00:38:48,442 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:48,444 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-03-14 00:38:48,445 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:48,483 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:48,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-03-14 00:38:48,817 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-03-14 00:38:49,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-03-14 00:38:49,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:50,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:50,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:50,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:50,869 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:50,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:50,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-03-14 00:38:50,908 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:50,910 [ scc.git] DEBUG Check current status 2026-03-14 00:38:50,910 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:50,913 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-03-14 00:38:50,913 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:50,951 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:51,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-03-14 00:38:51,274 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-03-14 00:38:51,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-03-14 00:38:51,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:52,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:52,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:53,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:53,218 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:53,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:53,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-03-14 00:38:53,257 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:53,259 [ scc.git] DEBUG Check current status 2026-03-14 00:38:53,259 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:53,261 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-03-14 00:38:53,261 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:53,300 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:53,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-03-14 00:38:54,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:54,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:55,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:55,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:55,839 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:55,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:55,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-03-14 00:38:55,878 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-14 00:38:55,880 [ scc.git] DEBUG Check current status 2026-03-14 00:38:55,880 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:55,882 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-03-14 00:38:55,883 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:55,921 [ scc.config] DEBUG Found remote.origin.url 2026-03-14 00:38:55,921 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-03-14 00:38:56,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-14 00:38:56,241 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-14 00:38:56,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-03-14 00:38:56,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-14 00:38:57,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-14 00:38:57,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-14 00:38:58,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-14 00:38:58,341 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:38:58,378 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:38:58,378 [ scc.git] DEBUG Resetting... 2026-03-14 00:38:58,378 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-03-14 00:38:58,386 [ scc.git] DEBUG HEAD is now at 52db6bf merge master -Dorg -Snone 2026-03-14 00:38:58,386 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-03-14 00:38:58,438 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-03-14 00:38:58,454 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-03-14 00:38:58,490 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-03-14 00:38:58,508 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-03-14 00:38:58,522 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-03-14 00:38:58,539 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-03-14 00:38:58,553 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-03-14 00:38:58,567 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-03-14 00:38:58,577 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-03-14 00:38:58,601 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-03-14 00:38:58,604 [ scc.git] DEBUG Check current status 2026-03-14 00:38:58,604 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-14 00:38:58,606 [ scc.git] DEBUG 52db6bf merge master -Dorg -Snone 2026-03-14 00:38:58,606 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-14 00:38:58,649 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-14 00:38:58,651 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-14 00:38:58,654 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-03-14 00:38:58,657 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-03-14 00:38:58,661 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-03-14 00:38:58,663 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-14 00:38:58,666 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-14 00:38:58,669 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2026-03-14 00:38:58,672 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-14 00:38:58,674 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-03-14 00:38:58,677 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-14 00:38:58,679 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-14 00:38:58,683 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-03-14 00:38:58,685 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-14 00:38:58,689 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-03-14 00:38:58,691 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-14 00:38:58,694 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-03-14 00:38:58,696 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-03-14 00:38:58,698 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-14 00:38:58,701 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-14 00:38:58,704 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-14 00:38:58,707 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-03-14 00:38:58,708 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-03-14 00:38:58,708 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-03-14 00:38:58,708 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-03-14 00:38:58,708 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-03-14 00:38:58,708 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-03-14 00:38:58,708 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-03-14 00:38:58,708 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:38:58,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-03-14 00:38:59,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-03-14 00:38:59,475 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:39:00,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-03-14 00:39:00,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:39:01,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-03-14 00:39:01,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:39:01,679 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-14 00:39:02,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-03-14 00:39:02,184 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:39:02,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-03-14 00:39:03,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:39:03,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-03-14 00:39:04,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:39:04,056 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-14 00:39:04,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-03-14 00:39:04,598 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:39:05,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-03-14 00:39:05,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:39:06,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-03-14 00:39:06,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:39:06,609 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-14 00:39:06,610 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:39:06,610 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:39:06,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:06,612 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:39:06,614 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:39:06,614 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:39:06,617 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:39:06,619 [ scc.git] DEBUG Already up to date. 2026-03-14 00:39:06,619 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-03-14 00:39:06,908 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-14 00:39:06,908 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-03-14 00:39:06,912 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-03-14 00:39:07,289 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-14 00:39:07,289 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-03-14 00:39:07,293 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-03-14 00:39:07,637 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-14 00:39:07,637 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-03-14 00:39:07,641 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:39:07,641 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:39:07,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:07,643 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-14 00:39:07,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:07,647 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-14 00:39:07,649 [ scc.git] DEBUG Already up to date. 2026-03-14 00:39:07,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:39:07,819 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-14 00:39:07,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:07,823 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-14 00:39:07,826 [ scc.git] DEBUG Already up to date. 2026-03-14 00:39:08,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:39:08,234 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-14 00:39:08,237 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:08,239 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-14 00:39:08,241 [ scc.git] DEBUG Already up to date. 2026-03-14 00:39:08,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:39:08,806 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:39:08,856 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:39:08,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:08,859 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:39:09,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-03-14 00:39:09,240 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:39:09,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-03-14 00:39:09,240 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:39:09,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:09,243 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:39:09,245 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:39:09,245 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:39:09,247 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:39:09,250 [ scc.git] DEBUG Already up to date. 2026-03-14 00:39:09,250 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:39:09,250 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:39:09,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:09,252 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:39:09,290 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:39:09,290 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:09,292 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:39:09,328 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:39:09,331 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7850199bd0> has no local changes 2026-03-14 00:39:09,331 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:39:09,336 [ scc.git] DEBUG [detached HEAD 81b2f93] merge master -Dorg -Ssuccess-only 2026-03-14 00:39:09,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:39:09,337 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:39:09,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-03-14 00:39:10,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-03-14 00:39:10,407 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:39:10,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-03-14 00:39:11,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:39:11,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:39:12,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-03-14 00:39:12,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:39:12,841 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:39:13,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-03-14 00:39:13,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-03-14 00:39:13,902 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:39:13,902 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-03-14 00:39:13,902 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:39:13,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:13,905 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:39:13,907 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:39:13,907 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:39:13,910 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:39:13,913 [ scc.git] DEBUG Already up to date. 2026-03-14 00:39:13,913 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-03-14 00:39:14,188 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-03-14 00:39:14,188 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-03-14 00:39:14,192 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:39:14,192 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:39:14,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:14,194 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-03-14 00:39:14,197 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:14,199 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-03-14 00:39:14,205 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:39:14,207 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-14 00:39:14,207 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-14 00:39:14,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:39:14,374 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:39:14,411 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:39:14,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:14,413 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:39:14,449 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:39:14,452 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7850186bd0> has no local changes 2026-03-14 00:39:14,452 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:39:14,458 [ scc.git] DEBUG [detached HEAD 96a5203] merge master -Dorg -Ssuccess-only 2026-03-14 00:39:14,458 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:39:14,458 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:39:14,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-03-14 00:39:15,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-03-14 00:39:15,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-03-14 00:39:16,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-03-14 00:39:16,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:39:17,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:39:17,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-03-14 00:39:18,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:39:18,321 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-03-14 00:39:18,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-03-14 00:39:19,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-03-14 00:39:19,286 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:39:19,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-03-14 00:39:19,286 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:39:19,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:19,289 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:39:19,291 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:39:19,291 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:39:19,294 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:39:19,301 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-03-14 00:39:19,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-03-14 00:39:20,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-03-14 00:39:21,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-03-14 00:39:22,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-03-14 00:39:22,099 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-03-14 00:39:22,372 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-03-14 00:39:22,372 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-03-14 00:39:22,376 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:39:22,376 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:39:22,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:22,378 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-03-14 00:39:22,381 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:22,384 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-03-14 00:39:22,391 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-03-14 00:39:22,392 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:39:22,395 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-03-14 00:39:22,395 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-03-14 00:39:22,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:39:22,573 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:39:22,611 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:39:22,611 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:22,613 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:39:22,650 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:39:22,653 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7852ac2390> has no local changes 2026-03-14 00:39:22,653 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:39:22,659 [ scc.git] DEBUG [detached HEAD 61b89da] merge master -Dorg -Ssuccess-only 2026-03-14 00:39:22,659 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:39:22,659 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:39:23,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-03-14 00:39:23,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None 2026-03-14 00:39:24,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c HTTP/1.1" 200 None 2026-03-14 00:39:24,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:39:25,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:39:25,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c HTTP/1.1" 200 None 2026-03-14 00:39:26,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None 2026-03-14 00:39:26,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c HTTP/1.1" 200 None 2026-03-14 00:39:26,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None 2026-03-14 00:39:26,962 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated' 2026-03-14 00:39:27,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-03-14 00:39:27,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-03-14 00:39:28,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-03-14 00:39:28,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:39:29,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:39:29,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-03-14 00:39:30,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-03-14 00:39:30,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-03-14 00:39:31,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-03-14 00:39:31,256 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-03-14 00:39:31,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-03-14 00:39:32,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-03-14 00:39:32,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-03-14 00:39:33,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-03-14 00:39:33,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-03-14 00:39:34,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:39:34,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:39:35,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-03-14 00:39:35,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-03-14 00:39:36,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-03-14 00:39:36,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-03-14 00:39:36,812 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-03-14 00:39:37,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-03-14 00:39:37,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-03-14 00:39:38,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-03-14 00:39:38,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:39:39,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:39:39,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-03-14 00:39:40,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-03-14 00:39:40,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-03-14 00:39:41,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-03-14 00:39:41,385 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-03-14 00:39:41,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-03-14 00:39:42,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2026-03-14 00:39:42,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2026-03-14 00:39:43,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-03-14 00:39:43,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-03-14 00:39:44,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-03-14 00:39:44,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-03-14 00:39:45,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-03-14 00:39:45,272 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:39:45,272 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-03-14 00:39:45,272 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:39:45,272 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:45,275 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:39:45,277 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:39:45,277 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:39:45,281 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:39:45,292 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-03-14 00:39:45,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-03-14 00:39:46,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-03-14 00:39:47,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-03-14 00:39:48,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-03-14 00:39:48,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-03-14 00:39:49,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-03-14 00:39:50,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-03-14 00:39:50,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-03-14 00:39:51,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-03-14 00:39:52,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-03-14 00:39:53,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-03-14 00:39:53,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-03-14 00:39:53,898 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-03-14 00:39:54,191 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-14 00:39:54,191 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-03-14 00:39:54,196 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-03-14 00:39:54,457 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-14 00:39:54,457 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-03-14 00:39:54,461 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-03-14 00:39:54,729 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-14 00:39:54,730 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-03-14 00:39:54,734 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head' 2026-03-14 00:39:54,993 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-14 00:39:54,993 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD 2026-03-14 00:39:54,998 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:39:54,998 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:39:54,998 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:55,000 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-03-14 00:39:55,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:55,006 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-03-14 00:39:55,018 [ scc.git] DEBUG Auto-merging README.rst 2026-03-14 00:39:55,018 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-03-14 00:39:55,018 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-03-14 00:39:55,018 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-03-14 00:39:55,018 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-03-14 00:39:55,019 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-03-14 00:39:55,019 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-03-14 00:39:55,019 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-03-14 00:39:55,019 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-03-14 00:39:55,019 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-03-14 00:39:55,019 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-03-14 00:39:55,019 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-14 00:39:55,019 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-14 00:39:55,022 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-14 00:39:55,026 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-14 00:39:55,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:39:55,195 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-03-14 00:39:55,199 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-14 00:39:55,201 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#88](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/util.py - src/omero_zarr/cli.py - src/omero_zarr/raw_pixels.py - src/omero_zarr/masks.py - test/integration/clitest/test_export.py --conflicts 2026-03-14 00:39:55,203 [ scc.config] DEBUG Found github.token 2026-03-14 00:39:55,203 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-03-14 00:39:55,203 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-03-14 00:39:55,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:55,209 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-03-14 00:39:55,219 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-03-14 00:39:55,219 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-03-14 00:39:55,219 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-03-14 00:39:55,219 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-03-14 00:39:55,219 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-14 00:39:55,219 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-14 00:39:55,222 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-14 00:39:55,226 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-14 00:39:55,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:39:55,623 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-03-14 00:39:55,627 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-14 00:39:55,629 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#88](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - src/omero_zarr/masks.py - test/integration/clitest/test_export.py --conflicts 2026-03-14 00:39:55,631 [ scc.config] DEBUG Found github.token 2026-03-14 00:39:55,631 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-03-14 00:39:55,631 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-03-14 00:39:55,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:55,637 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-03-14 00:39:55,647 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-03-14 00:39:55,647 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-03-14 00:39:55,647 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-03-14 00:39:55,647 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-03-14 00:39:55,647 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-03-14 00:39:55,647 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-14 00:39:55,647 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-14 00:39:55,650 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-14 00:39:55,654 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-14 00:39:56,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:39:56,049 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-03-14 00:39:56,053 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-14 00:39:56,056 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#88](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/zarr_import.py - test/integration/clitest/test_import.py --conflicts 2026-03-14 00:39:56,058 [ scc.config] DEBUG Found github.token 2026-03-14 00:39:56,058 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-03-14 00:39:56,058 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-03-14 00:39:56,061 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:56,063 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-03-14 00:39:56,071 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:39:56,074 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++ 2026-03-14 00:39:56,074 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++------------------- 2026-03-14 00:39:56,074 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-) 2026-03-14 00:39:56,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:39:56,469 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:39:56,506 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:39:56,506 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:39:56,509 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:39:56,545 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:39:56,548 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7850187110> has no local changes 2026-03-14 00:39:56,548 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:39:56,554 [ scc.git] DEBUG [detached HEAD 9cc8c58] merge master -Dorg -Ssuccess-only 2026-03-14 00:39:56,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:39:56,555 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:39:57,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-03-14 00:39:57,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/669 HTTP/1.1" 200 None 2026-03-14 00:39:58,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/666 HTTP/1.1" 200 None 2026-03-14 00:39:58,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/666/comments HTTP/1.1" 200 None 2026-03-14 00:39:59,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/870a04c282c68091e2e59c8bc04247f7419d05e4 HTTP/1.1" 200 None 2026-03-14 00:39:59,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/870a04c282c68091e2e59c8bc04247f7419d05e4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:40:00,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/870a04c282c68091e2e59c8bc04247f7419d05e4 HTTP/1.1" 200 None 2026-03-14 00:40:00,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/870a04c282c68091e2e59c8bc04247f7419d05e4?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:40:00,431 [ scc.repo] DEBUG - PR 666 will-moore 'Standalone app' 2026-03-14 00:40:00,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663 HTTP/1.1" 200 None 2026-03-14 00:40:01,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663/comments HTTP/1.1" 200 None 2026-03-14 00:40:01,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c1c55355455cf137da631b7690e8d867f7ab1ce3 HTTP/1.1" 200 None 2026-03-14 00:40:02,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c1c55355455cf137da631b7690e8d867f7ab1ce3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:40:02,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c1c55355455cf137da631b7690e8d867f7ab1ce3/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:40:03,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c1c55355455cf137da631b7690e8d867f7ab1ce3 HTTP/1.1" 200 None 2026-03-14 00:40:03,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c1c55355455cf137da631b7690e8d867f7ab1ce3?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:40:03,858 [ scc.repo] DEBUG - PR 663 will-moore 'Zarr' 2026-03-14 00:40:04,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662 HTTP/1.1" 200 None 2026-03-14 00:40:04,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662/comments HTTP/1.1" 200 None 2026-03-14 00:40:05,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfaed4dabe5ddc7f27de211c1a2630942a55a775 HTTP/1.1" 200 None 2026-03-14 00:40:05,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfaed4dabe5ddc7f27de211c1a2630942a55a775/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:40:06,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfaed4dabe5ddc7f27de211c1a2630942a55a775/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:40:06,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfaed4dabe5ddc7f27de211c1a2630942a55a775 HTTP/1.1" 200 None 2026-03-14 00:40:07,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/cfaed4dabe5ddc7f27de211c1a2630942a55a775?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:40:07,258 [ scc.repo] DEBUG - PR 662 will-moore 'Export script handles OME-zarr images' 2026-03-14 00:40:07,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-03-14 00:40:08,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-03-14 00:40:08,176 [ scc.repo] DEBUG # ... Include label: include 2026-03-14 00:40:08,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-03-14 00:40:09,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:40:09,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:40:10,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-03-14 00:40:10,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:40:10,587 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-03-14 00:40:11,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2026-03-14 00:40:11,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2026-03-14 00:40:11,572 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:40:11,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-03-14 00:40:11,572 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:40:11,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:40:11,575 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:40:11,578 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:40:11,578 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:40:11,583 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:40:11,623 [ scc.git] DEBUG Updating 9cc36cde..acada9be 2026-03-14 00:40:12,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-03-14 00:40:12,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-03-14 00:40:13,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-03-14 00:40:14,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-03-14 00:40:14,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-03-14 00:40:15,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-03-14 00:40:16,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-03-14 00:40:17,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-03-14 00:40:17,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-03-14 00:40:18,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-03-14 00:40:19,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-03-14 00:40:20,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-03-14 00:40:20,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-03-14 00:40:21,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-03-14 00:40:22,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-03-14 00:40:23,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-03-14 00:40:23,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-03-14 00:40:24,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-03-14 00:40:25,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-03-14 00:40:25,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-03-14 00:40:26,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-03-14 00:40:27,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-03-14 00:40:27,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-03-14 00:40:28,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-03-14 00:40:29,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-03-14 00:40:29,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-03-14 00:40:30,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-03-14 00:40:31,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-03-14 00:40:31,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-03-14 00:40:32,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-03-14 00:40:33,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-03-14 00:40:33,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-03-14 00:40:33,876 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-03-14 00:40:34,318 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-14 00:40:34,318 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-03-14 00:40:34,322 [ scc.git] DEBUG Calling 'git fetch origin pull/662/head' 2026-03-14 00:40:34,593 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-14 00:40:34,593 [ scc.git] DEBUG * branch refs/pull/662/head -> FETCH_HEAD 2026-03-14 00:40:34,597 [ scc.git] DEBUG Calling 'git fetch origin pull/663/head' 2026-03-14 00:40:35,017 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-14 00:40:35,017 [ scc.git] DEBUG * branch refs/pull/663/head -> FETCH_HEAD 2026-03-14 00:40:35,022 [ scc.git] DEBUG Calling 'git fetch origin pull/666/head' 2026-03-14 00:40:35,366 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-14 00:40:35,366 [ scc.git] DEBUG * branch refs/pull/666/head -> FETCH_HEAD 2026-03-14 00:40:35,370 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:40:35,370 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:40:35,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:40:35,372 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-03-14 00:40:35,381 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:40:35,383 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-03-14 00:40:35,409 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-03-14 00:40:35,409 [ scc.git] DEBUG Auto-merging src/index.html 2026-03-14 00:40:35,409 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-03-14 00:40:35,410 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:40:35,416 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-03-14 00:40:35,416 [ scc.git] DEBUG src/index.html | 11 ++ 2026-03-14 00:40:35,416 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-03-14 00:40:35,416 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-03-14 00:40:35,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:40:35,606 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cfaed4dabe5ddc7f27de211c1a2630942a55a775' 2026-03-14 00:40:35,612 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:40:35,614 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 662 (Export script handles OME-zarr images) cfaed4dabe5ddc7f27de211c1a2630942a55a775' 2026-03-14 00:40:35,632 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-03-14 00:40:35,633 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:40:35,638 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 435 +++++++++++++++------ 2026-03-14 00:40:35,638 [ scc.git] DEBUG 1 file changed, 319 insertions(+), 116 deletions(-) 2026-03-14 00:40:36,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:40:36,027 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c1c55355455cf137da631b7690e8d867f7ab1ce3' 2026-03-14 00:40:36,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:40:36,036 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 663 (Zarr) c1c55355455cf137da631b7690e8d867f7ab1ce3' 2026-03-14 00:40:36,053 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:40:36,061 [ scc.git] DEBUG omero_figure/views.py | 11 +- 2026-03-14 00:40:36,062 [ scc.git] DEBUG package-lock.json | 72 ++- 2026-03-14 00:40:36,062 [ scc.git] DEBUG package.json | 4 +- 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/js/models/figure_model.js | 104 ++++- 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/js/models/panel_model.js | 35 +- 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/js/models/zarr_utils.js | 483 +++++++++++++++++++++ 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 3 + 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/js/views/chgrp_modal_view.js | 10 +- 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/js/views/crop_modal_view.js | 12 +- 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/js/views/info_panel_view.js | 37 +- 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/js/views/labels_from_maps_modal.js | 10 +- 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/js/views/lutpicker.js | 2 +- 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/js/views/modal_views.js | 33 +- 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/js/views/panel_view.js | 9 +- 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/js/views/right_panel_view.js | 11 +- 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 49 +-- 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/js/views/util.js | 48 +- 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/templates/figure_panel.template.html | 2 +- 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/templates/info_panel.template.html | 7 + 2026-03-14 00:40:36,062 [ scc.git] DEBUG .../modal_dialogs/crop_modal_roi.template.html | 3 +- 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/templates/viewport_inner.template.html | 3 +- 2026-03-14 00:40:36,062 [ scc.git] DEBUG src/test.html | 25 ++ 2026-03-14 00:40:36,062 [ scc.git] DEBUG 22 files changed, 832 insertions(+), 141 deletions(-) 2026-03-14 00:40:36,062 [ scc.git] DEBUG create mode 100644 src/js/models/zarr_utils.js 2026-03-14 00:40:36,062 [ scc.git] DEBUG create mode 100644 src/test.html 2026-03-14 00:40:36,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:40:36,597 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...870a04c282c68091e2e59c8bc04247f7419d05e4' 2026-03-14 00:40:36,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:40:36,607 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 666 (Standalone app) 870a04c282c68091e2e59c8bc04247f7419d05e4' 2026-03-14 00:40:36,633 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-03-14 00:40:36,633 [ scc.git] DEBUG Auto-merging package.json 2026-03-14 00:40:36,633 [ scc.git] DEBUG Auto-merging src/css/figure.css 2026-03-14 00:40:36,633 [ scc.git] DEBUG Auto-merging src/index.html 2026-03-14 00:40:36,633 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-03-14 00:40:36,633 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-03-14 00:40:36,633 [ scc.git] DEBUG Auto-merging src/js/views/util.js 2026-03-14 00:40:36,633 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/util.js 2026-03-14 00:40:36,633 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-14 00:40:36,633 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-14 00:40:36,639 [ scc.git] DEBUG Calling 'git reset --hard 649bbe410706d35c1149976771366d095b14ef9c' 2026-03-14 00:40:36,649 [ scc.git] DEBUG HEAD is now at 649bbe41 merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 2026-03-14 00:40:37,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:40:37,037 [ scc.git] DEBUG Calling 'git merge-base acada9be0cc8759f88dbfd89e8f1f7d69955749c 870a04c282c68091e2e59c8bc04247f7419d05e4' 2026-03-14 00:40:37,043 [ scc.git] DEBUG Calling 'git diff --name-only b79d638b95385463319f73afc484cf4a1ee3ba13..acada9be0cc8759f88dbfd89e8f1f7d69955749c' 2026-03-14 00:40:37,047 [ scc.git] INFO - PR 666 will-moore 'Standalone app' Conflicting PR. Removed from build [OMERO-plugins-push#88](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/consoleText) for more details. Possible conflicts: - PR #663 will-moore 'Zarr' - src/js/views/util.js - Upstream changes - src/js/views/util.js --conflicts 2026-03-14 00:40:37,050 [ scc.config] DEBUG Found github.token 2026-03-14 00:40:37,050 [ scc.git] DEBUG Not adding comment to issue #666, already --conflicts. 2026-03-14 00:40:37,050 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:40:37,088 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:40:37,088 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:40:37,090 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:40:37,127 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:40:37,135 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f78501a1b10> has no local changes 2026-03-14 00:40:37,135 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 669 will-moore 'Standalone python script' (stage: draft) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..acada9be Previously merged: - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' Conflicting PRs (not included): - PR 666 will-moore 'Standalone app' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:40:37,142 [ scc.git] DEBUG [detached HEAD 265ce9f9] merge master -Dorg -Ssuccess-only 2026-03-14 00:40:37,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:40:37,142 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:40:37,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-03-14 00:40:38,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-03-14 00:40:38,158 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:40:38,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-03-14 00:40:39,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:40:39,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:40:40,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-03-14 00:40:40,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:40:40,588 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:40:41,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-03-14 00:40:41,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-03-14 00:40:42,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-03-14 00:40:42,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:40:43,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-03-14 00:40:43,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:40:43,711 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-03-14 00:40:43,711 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:40:43,711 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-03-14 00:40:43,711 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:40:43,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:40:43,714 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:40:43,716 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:40:43,716 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:40:43,719 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:40:43,722 [ scc.git] DEBUG Already up to date. 2026-03-14 00:40:43,722 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-03-14 00:40:44,135 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-03-14 00:40:44,135 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-03-14 00:40:44,140 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-03-14 00:40:44,506 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-03-14 00:40:44,506 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-03-14 00:40:44,510 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:40:44,510 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:40:44,510 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:40:44,512 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-03-14 00:40:44,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:40:44,518 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-03-14 00:40:44,524 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-03-14 00:40:44,525 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:40:44,528 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-03-14 00:40:44,528 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-03-14 00:40:44,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:40:44,726 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-03-14 00:40:44,729 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:40:44,732 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-03-14 00:40:44,738 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:40:44,741 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-14 00:40:44,741 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-14 00:40:45,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:40:45,150 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:40:45,188 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:40:45,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:40:45,190 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:40:45,226 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:40:45,229 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f78501ae8d0> has no local changes 2026-03-14 00:40:45,229 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:40:45,235 [ scc.git] DEBUG [detached HEAD 29bfbd4] merge master -Dorg -Ssuccess-only 2026-03-14 00:40:45,235 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:40:45,235 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:40:45,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-03-14 00:40:46,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-03-14 00:40:46,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-03-14 00:40:47,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-03-14 00:40:47,264 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:40:47,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-03-14 00:40:48,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:40:48,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:40:49,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-03-14 00:40:49,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:40:49,852 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-03-14 00:40:50,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-03-14 00:40:50,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-03-14 00:40:51,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-03-14 00:40:51,326 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:40:51,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-03-14 00:40:52,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:40:52,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-03-14 00:40:53,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:40:53,295 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-03-14 00:40:53,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-03-14 00:40:53,819 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:40:54,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-03-14 00:40:54,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:40:55,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-03-14 00:40:55,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:40:55,784 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-03-14 00:40:56,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-03-14 00:40:56,273 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:40:56,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-03-14 00:40:57,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:40:57,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-03-14 00:40:58,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:40:58,188 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-03-14 00:40:58,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-03-14 00:40:59,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-03-14 00:40:59,135 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:40:59,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-03-14 00:41:00,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:41:00,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-03-14 00:41:01,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:41:01,131 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-03-14 00:41:01,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-03-14 00:41:01,617 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:41:02,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-03-14 00:41:02,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:41:03,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-03-14 00:41:03,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:41:03,595 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-03-14 00:41:04,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-03-14 00:41:04,068 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:41:04,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-03-14 00:41:05,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:41:05,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-03-14 00:41:06,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:41:06,102 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-03-14 00:41:06,102 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:41:06,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-03-14 00:41:06,103 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:41:06,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:06,105 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:41:06,108 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:41:06,108 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:41:06,110 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:41:06,113 [ scc.git] DEBUG Already up to date. 2026-03-14 00:41:06,113 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-03-14 00:41:06,381 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-14 00:41:06,381 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-03-14 00:41:06,385 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-03-14 00:41:06,759 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-14 00:41:06,759 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-03-14 00:41:06,763 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-03-14 00:41:07,208 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-14 00:41:07,208 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-03-14 00:41:07,212 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-03-14 00:41:07,649 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-14 00:41:07,649 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-03-14 00:41:07,653 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-03-14 00:41:07,916 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-14 00:41:07,916 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-03-14 00:41:07,920 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-03-14 00:41:08,179 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-14 00:41:08,179 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-03-14 00:41:08,183 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-03-14 00:41:08,545 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-14 00:41:08,545 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-03-14 00:41:08,549 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:41:08,549 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:41:08,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:08,551 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-03-14 00:41:08,554 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:08,556 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-03-14 00:41:08,564 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:41:08,569 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-03-14 00:41:08,569 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-03-14 00:41:08,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:41:08,764 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-03-14 00:41:08,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:08,768 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-03-14 00:41:08,783 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-14 00:41:08,783 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:41:08,788 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-03-14 00:41:08,788 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-03-14 00:41:09,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:41:09,184 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-03-14 00:41:09,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:09,189 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-03-14 00:41:09,202 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-14 00:41:09,202 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-14 00:41:09,203 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-14 00:41:09,203 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-14 00:41:09,206 [ scc.git] DEBUG Calling 'git reset --hard 71b08b6f4f78c51a0cb6f934581a40cab7deaafd' 2026-03-14 00:41:09,210 [ scc.git] DEBUG HEAD is now at 71b08b6 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-03-14 00:41:09,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:41:09,608 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-03-14 00:41:09,610 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-03-14 00:41:09,613 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#88](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-03-14 00:41:09,615 [ scc.config] DEBUG Found github.token 2026-03-14 00:41:09,615 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-03-14 00:41:09,615 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-03-14 00:41:09,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:09,620 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-03-14 00:41:09,635 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-14 00:41:09,635 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:41:09,640 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-03-14 00:41:09,640 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-03-14 00:41:10,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:41:10,029 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-03-14 00:41:10,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:10,034 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-03-14 00:41:10,048 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-14 00:41:10,049 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:41:10,054 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-03-14 00:41:10,054 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-03-14 00:41:10,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:41:10,448 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-03-14 00:41:10,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:10,453 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-03-14 00:41:10,468 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-14 00:41:10,468 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-14 00:41:10,468 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-14 00:41:10,468 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-14 00:41:10,471 [ scc.git] DEBUG Calling 'git reset --hard 7e8e95032ff8ba1b037bec81e2efccea669d982b' 2026-03-14 00:41:10,475 [ scc.git] DEBUG HEAD is now at 7e8e950 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-03-14 00:41:10,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:41:10,872 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-03-14 00:41:10,875 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-03-14 00:41:10,877 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#88](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-03-14 00:41:10,879 [ scc.config] DEBUG Found github.token 2026-03-14 00:41:10,879 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-03-14 00:41:10,879 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-03-14 00:41:10,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:10,884 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-03-14 00:41:10,902 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-14 00:41:10,902 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-14 00:41:10,902 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-14 00:41:10,902 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-14 00:41:10,905 [ scc.git] DEBUG Calling 'git reset --hard 7e8e95032ff8ba1b037bec81e2efccea669d982b' 2026-03-14 00:41:10,909 [ scc.git] DEBUG HEAD is now at 7e8e950 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-03-14 00:41:11,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:41:11,295 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-03-14 00:41:11,298 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-03-14 00:41:11,300 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#88](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-03-14 00:41:11,302 [ scc.config] DEBUG Found github.token 2026-03-14 00:41:11,302 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-03-14 00:41:11,302 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:41:11,340 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:41:11,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:11,342 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:41:11,379 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:41:11,383 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f784cf72990> has no local changes 2026-03-14 00:41:11,383 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:41:11,389 [ scc.git] DEBUG [detached HEAD eb144a8] merge master -Dorg -Ssuccess-only 2026-03-14 00:41:11,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:41:11,389 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:41:11,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-03-14 00:41:12,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/514 HTTP/1.1" 200 None 2026-03-14 00:41:12,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f29e3950325423129b309fdefc7851ee0dd46e26 HTTP/1.1" 200 None 2026-03-14 00:41:13,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f29e3950325423129b309fdefc7851ee0dd46e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:41:13,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f29e3950325423129b309fdefc7851ee0dd46e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:41:14,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f29e3950325423129b309fdefc7851ee0dd46e26 HTTP/1.1" 200 None 2026-03-14 00:41:14,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/f29e3950325423129b309fdefc7851ee0dd46e26?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:41:14,849 [ scc.repo] DEBUG - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-03-14 00:41:15,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/513 HTTP/1.1" 200 None 2026-03-14 00:41:15,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-03-14 00:41:16,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:41:16,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:41:17,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-03-14 00:41:17,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/aebb6273b9267a47a47363208fa97dc9c638a688?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:41:17,723 [ scc.repo] DEBUG - PR 513 jburel 'Bump Python version' 2026-03-14 00:41:18,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/512 HTTP/1.1" 200 None 2026-03-14 00:41:18,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-03-14 00:41:19,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:41:19,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:41:20,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-03-14 00:41:20,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ec8f9e716c574a715529da53dff61ef178020c43?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:41:20,581 [ scc.repo] DEBUG - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-03-14 00:41:21,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-03-14 00:41:21,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-03-14 00:41:22,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-03-14 00:41:22,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-03-14 00:41:22,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-03-14 00:41:23,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-03-14 00:41:23,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-03-14 00:41:24,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-03-14 00:41:24,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-03-14 00:41:25,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:41:25,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-03-14 00:41:26,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:41:26,222 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-03-14 00:41:26,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2026-03-14 00:41:27,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2026-03-14 00:41:27,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-03-14 00:41:28,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:41:28,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-03-14 00:41:29,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:41:29,114 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2026-03-14 00:41:29,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2026-03-14 00:41:30,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2026-03-14 00:41:30,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-03-14 00:41:31,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:41:31,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-03-14 00:41:31,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:41:31,956 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2026-03-14 00:41:32,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-03-14 00:41:32,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-03-14 00:41:33,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2026-03-14 00:41:33,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:41:34,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:41:34,315 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:41:34,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-03-14 00:41:34,315 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:41:34,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:34,318 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:41:34,320 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:41:34,320 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:41:34,323 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:41:34,330 [ scc.git] DEBUG Updating 7a798ce..5e2de43 2026-03-14 00:41:35,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-03-14 00:41:35,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-03-14 00:41:35,698 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2026-03-14 00:41:35,995 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-14 00:41:35,995 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2026-03-14 00:41:35,999 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2026-03-14 00:41:36,376 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-14 00:41:36,376 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2026-03-14 00:41:36,380 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-03-14 00:41:36,644 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-14 00:41:36,644 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-03-14 00:41:36,648 [ scc.git] DEBUG Calling 'git fetch origin pull/512/head' 2026-03-14 00:41:37,013 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-14 00:41:37,013 [ scc.git] DEBUG * branch refs/pull/512/head -> FETCH_HEAD 2026-03-14 00:41:37,017 [ scc.git] DEBUG Calling 'git fetch origin pull/513/head' 2026-03-14 00:41:37,278 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-14 00:41:37,278 [ scc.git] DEBUG * branch refs/pull/513/head -> FETCH_HEAD 2026-03-14 00:41:37,282 [ scc.git] DEBUG Calling 'git fetch origin pull/514/head' 2026-03-14 00:41:37,543 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-14 00:41:37,543 [ scc.git] DEBUG * branch refs/pull/514/head -> FETCH_HEAD 2026-03-14 00:41:37,547 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:41:37,547 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:41:37,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:37,549 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-03-14 00:41:37,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:37,555 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-03-14 00:41:37,565 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2026-03-14 00:41:37,565 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2026-03-14 00:41:37,566 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:41:37,569 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2026-03-14 00:41:37,569 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2026-03-14 00:41:37,569 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2026-03-14 00:41:37,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:41:37,748 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2026-03-14 00:41:37,752 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:37,754 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2026-03-14 00:41:37,769 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-03-14 00:41:37,769 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-03-14 00:41:37,769 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-03-14 00:41:37,769 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-03-14 00:41:37,770 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:41:37,774 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2026-03-14 00:41:37,774 [ scc.git] DEBUG src/app/context.js | 6 +- 2026-03-14 00:41:37,774 [ scc.git] DEBUG src/app/header.html | 5 + 2026-03-14 00:41:37,774 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2026-03-14 00:41:37,774 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2026-03-14 00:41:37,774 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2026-03-14 00:41:37,774 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2026-03-14 00:41:37,774 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2026-03-14 00:41:38,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:41:38,170 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-03-14 00:41:38,174 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:38,176 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-03-14 00:41:38,186 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-03-14 00:41:38,186 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:41:38,190 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-03-14 00:41:38,190 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-03-14 00:41:38,190 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-03-14 00:41:38,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:41:38,596 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ec8f9e716c574a715529da53dff61ef178020c43' 2026-03-14 00:41:38,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:38,602 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 512 (Replace manual changelog by automated GH release step) ec8f9e716c574a715529da53dff61ef178020c43' 2026-03-14 00:41:38,611 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:41:38,614 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 + 2026-03-14 00:41:38,614 [ scc.git] DEBUG CHANGELOG.md | 261 ------------------------------------- 2026-03-14 00:41:38,614 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 261 deletions(-) 2026-03-14 00:41:38,614 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2026-03-14 00:41:39,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:41:39,020 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aebb6273b9267a47a47363208fa97dc9c638a688' 2026-03-14 00:41:39,024 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:39,026 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 513 (Bump Python version) aebb6273b9267a47a47363208fa97dc9c638a688' 2026-03-14 00:41:39,034 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-03-14 00:41:39,035 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:41:39,037 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 ++-- 2026-03-14 00:41:39,037 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2026-03-14 00:41:39,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:41:39,438 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f29e3950325423129b309fdefc7851ee0dd46e26' 2026-03-14 00:41:39,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:39,444 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 514 (Fix where interpolate_pixels server config is read from) f29e3950325423129b309fdefc7851ee0dd46e26' 2026-03-14 00:41:39,454 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-03-14 00:41:39,455 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:41:39,458 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 3 ++- 2026-03-14 00:41:39,458 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 1 deletion(-) 2026-03-14 00:41:39,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:41:39,877 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:41:39,917 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:41:39,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:39,919 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:41:39,955 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:41:39,960 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7850154dd0> has no local changes 2026-03-14 00:41:39,960 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:41:39,966 [ scc.git] DEBUG [detached HEAD 2321867] merge master -Dorg -Ssuccess-only 2026-03-14 00:41:39,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:41:39,967 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:41:40,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-03-14 00:41:40,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-03-14 00:41:41,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-03-14 00:41:41,396 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:41:41,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-03-14 00:41:42,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:41:42,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:41:43,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-03-14 00:41:43,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:41:43,961 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:41:44,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-03-14 00:41:44,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-03-14 00:41:45,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:41:45,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-03-14 00:41:46,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:41:46,385 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-14 00:41:46,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-03-14 00:41:47,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-03-14 00:41:47,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-03-14 00:41:48,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:41:48,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-03-14 00:41:49,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:41:49,159 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-03-14 00:41:49,159 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:41:49,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-03-14 00:41:49,160 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:41:49,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:49,162 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:41:49,165 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:41:49,165 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:41:49,167 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:41:49,170 [ scc.git] DEBUG Already up to date. 2026-03-14 00:41:49,170 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-03-14 00:41:49,457 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-03-14 00:41:49,457 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-03-14 00:41:49,461 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-03-14 00:41:49,729 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-03-14 00:41:49,729 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-03-14 00:41:49,733 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-03-14 00:41:49,994 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-03-14 00:41:49,994 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-03-14 00:41:49,999 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:41:49,999 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:41:49,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:50,001 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-03-14 00:41:50,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:50,007 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-03-14 00:41:50,014 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:41:50,017 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-03-14 00:41:50,017 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-03-14 00:41:50,017 [ scc.git] DEBUG requirements.txt | 2 +- 2026-03-14 00:41:50,017 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-03-14 00:41:50,017 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-03-14 00:41:50,017 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-03-14 00:41:50,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:41:50,198 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-03-14 00:41:50,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:50,204 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-03-14 00:41:50,211 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:41:50,214 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-14 00:41:50,214 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-14 00:41:50,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:41:50,618 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-03-14 00:41:50,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:50,623 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-03-14 00:41:50,631 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-03-14 00:41:50,631 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-03-14 00:41:50,631 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-14 00:41:50,631 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-14 00:41:50,633 [ scc.git] DEBUG Calling 'git reset --hard 313a59c7136361d9dfb524da1872fdc68938dc66' 2026-03-14 00:41:50,637 [ scc.git] DEBUG HEAD is now at 313a59c merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-03-14 00:41:51,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:41:51,040 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-03-14 00:41:51,042 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-03-14 00:41:51,044 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#88](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-03-14 00:41:51,047 [ scc.config] DEBUG Found github.token 2026-03-14 00:41:51,047 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-03-14 00:41:51,047 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:41:51,085 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:41:51,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:41:51,087 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:41:51,124 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:41:51,127 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7850152bd0> has no local changes 2026-03-14 00:41:51,127 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:41:51,133 [ scc.git] DEBUG [detached HEAD 2461c10] merge master -Dorg -Ssuccess-only 2026-03-14 00:41:51,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:41:51,134 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:41:51,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-03-14 00:41:52,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-03-14 00:41:52,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-03-14 00:41:53,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-03-14 00:41:53,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:41:54,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-03-14 00:41:54,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:41:54,480 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-03-14 00:41:54,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-03-14 00:41:55,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-03-14 00:41:55,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-03-14 00:41:56,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:41:56,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-03-14 00:41:57,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:41:57,359 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-03-14 00:41:57,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-03-14 00:41:58,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-03-14 00:41:58,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-03-14 00:41:59,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:41:59,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-03-14 00:42:00,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:42:00,296 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-03-14 00:42:00,296 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:42:00,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-03-14 00:42:00,297 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:00,297 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:00,299 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:42:00,301 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:42:00,301 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:42:00,304 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:42:00,310 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-03-14 00:42:00,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-03-14 00:42:00,988 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-03-14 00:42:01,410 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-03-14 00:42:01,410 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-03-14 00:42:01,414 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-03-14 00:42:01,678 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-03-14 00:42:01,678 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-03-14 00:42:01,682 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-03-14 00:42:02,070 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-03-14 00:42:02,070 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-03-14 00:42:02,074 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:42:02,074 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:02,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:02,076 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-03-14 00:42:02,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:02,082 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-03-14 00:42:02,094 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-03-14 00:42:02,094 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-03-14 00:42:02,094 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-03-14 00:42:02,094 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-03-14 00:42:02,094 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-14 00:42:02,094 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-14 00:42:02,096 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-14 00:42:02,101 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-03-14 00:42:02,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:42:02,284 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-03-14 00:42:02,287 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-14 00:42:02,290 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#88](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2026-03-14 00:42:02,292 [ scc.config] DEBUG Found github.token 2026-03-14 00:42:02,292 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-03-14 00:42:02,292 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-03-14 00:42:02,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:02,298 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-03-14 00:42:02,312 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-03-14 00:42:02,312 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-03-14 00:42:02,312 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-03-14 00:42:02,312 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-14 00:42:02,312 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-14 00:42:02,315 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-14 00:42:02,319 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-03-14 00:42:02,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:42:02,713 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-03-14 00:42:02,716 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-14 00:42:02,719 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#88](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-03-14 00:42:02,721 [ scc.config] DEBUG Found github.token 2026-03-14 00:42:02,721 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-03-14 00:42:02,721 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-03-14 00:42:02,723 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:02,726 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-03-14 00:42:02,734 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:42:02,738 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-03-14 00:42:02,738 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-03-14 00:42:03,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:42:03,143 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:42:03,180 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:03,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:03,183 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:42:03,218 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:42:03,222 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f785014bcd0> has no local changes 2026-03-14 00:42:03,222 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:42:03,228 [ scc.git] DEBUG [detached HEAD f0fde84] merge master -Dorg -Ssuccess-only 2026-03-14 00:42:03,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:42:03,228 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:42:03,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-03-14 00:42:04,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-03-14 00:42:04,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-03-14 00:42:05,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:42:05,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:42:06,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-03-14 00:42:06,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:42:06,736 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-14 00:42:07,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-03-14 00:42:07,235 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:42:07,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-03-14 00:42:08,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:42:08,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:42:09,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-03-14 00:42:09,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:42:09,774 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-03-14 00:42:10,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-03-14 00:42:10,263 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:42:10,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-03-14 00:42:11,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:42:11,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:42:12,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-03-14 00:42:12,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:42:12,765 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-03-14 00:42:13,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-03-14 00:42:13,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-03-14 00:42:14,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-03-14 00:42:14,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-03-14 00:42:15,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-03-14 00:42:15,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-03-14 00:42:16,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-03-14 00:42:16,077 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:42:16,077 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-03-14 00:42:16,077 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:16,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:16,080 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:42:16,082 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:42:16,082 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:42:16,084 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:42:16,087 [ scc.git] DEBUG Already up to date. 2026-03-14 00:42:16,087 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-03-14 00:42:16,496 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-03-14 00:42:16,496 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-03-14 00:42:16,500 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-03-14 00:42:16,964 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-03-14 00:42:16,964 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-03-14 00:42:16,968 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-03-14 00:42:17,229 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-03-14 00:42:17,229 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-03-14 00:42:17,233 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:42:17,233 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:17,233 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:17,235 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-03-14 00:42:17,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:17,240 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-03-14 00:42:17,247 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:42:17,250 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-03-14 00:42:17,250 [ scc.git] DEBUG package.json | 2 +- 2026-03-14 00:42:17,250 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-03-14 00:42:17,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:42:17,422 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-03-14 00:42:17,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:17,427 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-03-14 00:42:17,435 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-14 00:42:17,435 [ scc.git] DEBUG Auto-merging package.json 2026-03-14 00:42:17,436 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:42:17,439 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-03-14 00:42:17,439 [ scc.git] DEBUG package.json | 2 +- 2026-03-14 00:42:17,439 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-03-14 00:42:17,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:42:17,853 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-03-14 00:42:17,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:17,858 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-03-14 00:42:17,865 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:42:17,868 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-14 00:42:17,868 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-14 00:42:18,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:42:18,272 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:42:18,309 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:18,309 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:18,311 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:42:18,347 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:42:18,351 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f784cfb6390> has no local changes 2026-03-14 00:42:18,351 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:42:18,357 [ scc.git] DEBUG [detached HEAD 35af949] merge master -Dorg -Ssuccess-only 2026-03-14 00:42:18,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:42:18,357 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:42:18,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-03-14 00:42:19,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-03-14 00:42:19,257 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:42:19,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-03-14 00:42:20,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:42:20,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:42:21,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-03-14 00:42:21,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:42:21,797 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:42:21,797 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:42:21,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-03-14 00:42:21,797 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:21,797 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:21,800 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:42:21,802 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:42:21,802 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:42:21,805 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:42:21,807 [ scc.git] DEBUG Already up to date. 2026-03-14 00:42:21,807 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-03-14 00:42:22,087 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-03-14 00:42:22,087 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-03-14 00:42:22,091 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:42:22,091 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:22,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:22,094 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-03-14 00:42:22,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:22,098 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-03-14 00:42:22,104 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:42:22,107 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-14 00:42:22,107 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-14 00:42:22,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:42:22,276 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:42:22,314 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:22,314 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:22,316 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:42:22,351 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:42:22,354 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f784cf9bad0> has no local changes 2026-03-14 00:42:22,354 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:42:22,360 [ scc.git] DEBUG [detached HEAD cd42616] merge master -Dorg -Ssuccess-only 2026-03-14 00:42:22,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:42:22,361 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:42:22,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-03-14 00:42:23,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2026-03-14 00:42:23,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34/comments HTTP/1.1" 200 None 2026-03-14 00:42:23,689 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:42:24,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-03-14 00:42:24,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:42:25,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:42:25,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-03-14 00:42:26,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2026-03-14 00:42:26,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-03-14 00:42:27,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2026-03-14 00:42:27,138 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:42:27,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-03-14 00:42:27,608 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:42:27,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-03-14 00:42:27,608 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:27,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:27,610 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:42:27,613 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:42:27,613 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:42:27,616 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:42:27,623 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-03-14 00:42:28,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-03-14 00:42:29,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-03-14 00:42:29,055 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2026-03-14 00:42:29,336 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-03-14 00:42:29,336 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2026-03-14 00:42:29,340 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:42:29,341 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:29,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:29,343 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2026-03-14 00:42:29,346 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:29,348 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2026-03-14 00:42:29,354 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-03-14 00:42:29,354 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-03-14 00:42:29,354 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-14 00:42:29,354 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-14 00:42:29,357 [ scc.git] DEBUG Calling 'git reset --hard fc9ff96901ce7b92e3ba51327ba7ba64fff76959' 2026-03-14 00:42:29,360 [ scc.git] DEBUG HEAD is now at fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-03-14 00:42:29,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:42:29,533 [ scc.git] DEBUG Calling 'git merge-base fc9ff96901ce7b92e3ba51327ba7ba64fff76959 149bb248277256d589ea0db597c04739e8134301' 2026-03-14 00:42:29,535 [ scc.git] DEBUG Calling 'git diff --name-only bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9..fc9ff96901ce7b92e3ba51327ba7ba64fff76959' 2026-03-14 00:42:29,538 [ scc.git] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#88](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/consoleText) for more details. Possible conflicts: - Upstream changes - .github/workflows/publish_pypi.yml --conflicts 2026-03-14 00:42:29,540 [ scc.config] DEBUG Found github.token 2026-03-14 00:42:29,540 [ scc.git] DEBUG Not adding comment to issue #34, already --conflicts. 2026-03-14 00:42:29,540 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:42:29,576 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:29,576 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:29,578 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:42:29,614 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:42:29,617 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f784cfadf50> has no local changes 2026-03-14 00:42:29,617 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Conflicting PRs (not included): - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:42:29,622 [ scc.git] DEBUG [detached HEAD c254160] merge master -Dorg -Ssuccess-only 2026-03-14 00:42:29,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:42:29,623 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:42:30,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-03-14 00:42:30,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-03-14 00:42:30,575 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:42:31,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-03-14 00:42:31,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:42:32,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:42:32,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-03-14 00:42:33,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:42:33,207 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:42:33,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-03-14 00:42:34,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-03-14 00:42:34,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-03-14 00:42:35,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:42:35,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-03-14 00:42:36,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:42:36,069 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-03-14 00:42:36,069 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:42:36,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-03-14 00:42:36,070 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:36,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:36,072 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:42:36,075 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:42:36,075 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:42:36,077 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:42:36,080 [ scc.git] DEBUG Already up to date. 2026-03-14 00:42:36,080 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-03-14 00:42:36,602 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-03-14 00:42:36,602 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-03-14 00:42:36,606 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-03-14 00:42:36,896 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-03-14 00:42:36,896 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-03-14 00:42:36,900 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:42:36,900 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:36,900 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:36,902 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-03-14 00:42:36,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:36,907 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-03-14 00:42:36,915 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-03-14 00:42:36,915 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-03-14 00:42:36,915 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-03-14 00:42:36,915 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-03-14 00:42:36,915 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-03-14 00:42:36,915 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-03-14 00:42:36,915 [ scc.git] DEBUG Auto-merging setup.py 2026-03-14 00:42:36,915 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-03-14 00:42:36,915 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-14 00:42:36,915 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-14 00:42:36,918 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-03-14 00:42:36,922 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-03-14 00:42:37,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:42:37,100 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-03-14 00:42:37,103 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-03-14 00:42:37,106 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#88](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/views.py - omero_signup/urls.py - setup.py --conflicts 2026-03-14 00:42:37,108 [ scc.config] DEBUG Found github.token 2026-03-14 00:42:37,108 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-03-14 00:42:37,108 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-03-14 00:42:37,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:37,112 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-03-14 00:42:37,119 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:42:37,121 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-14 00:42:37,121 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-14 00:42:37,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:42:37,522 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:42:37,559 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:37,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:37,561 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:42:37,596 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:42:37,599 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f784cfacd10> has no local changes 2026-03-14 00:42:37,599 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:42:37,605 [ scc.git] DEBUG [detached HEAD a42c8ea] merge master -Dorg -Ssuccess-only 2026-03-14 00:42:37,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:42:37,605 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:42:38,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-03-14 00:42:38,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-03-14 00:42:39,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-03-14 00:42:39,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-03-14 00:42:40,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-03-14 00:42:40,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:42:40,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-03-14 00:42:41,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:42:41,402 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-03-14 00:42:41,402 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:42:41,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-03-14 00:42:41,402 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:41,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:41,405 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:42:41,407 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:42:41,407 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:42:41,410 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:42:41,416 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-03-14 00:42:42,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-03-14 00:42:42,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-03-14 00:42:43,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-03-14 00:42:43,828 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-03-14 00:42:44,245 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-03-14 00:42:44,245 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-03-14 00:42:44,249 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:42:44,249 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:44,249 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:44,252 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-03-14 00:42:44,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:44,257 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-03-14 00:42:44,263 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-03-14 00:42:44,264 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:42:44,267 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-03-14 00:42:44,267 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-03-14 00:42:44,267 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-03-14 00:42:44,267 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-03-14 00:42:44,267 [ scc.git] DEBUG ms/test | 2 ++ 2026-03-14 00:42:44,267 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-03-14 00:42:44,267 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-03-14 00:42:44,267 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-03-14 00:42:44,267 [ scc.git] DEBUG create mode 100755 ms/test 2026-03-14 00:42:44,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:42:44,454 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:42:44,491 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:44,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:44,493 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:42:44,528 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:42:44,531 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f784cfad750> has no local changes 2026-03-14 00:42:44,531 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:42:44,537 [ scc.git] DEBUG [detached HEAD cdd7f60] merge master -Dorg -Ssuccess-only 2026-03-14 00:42:44,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:42:44,537 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:42:44,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-03-14 00:42:45,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-03-14 00:42:45,447 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:42:46,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-03-14 00:42:46,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:42:47,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:42:47,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-03-14 00:42:48,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:42:48,275 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:42:48,275 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:42:48,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-03-14 00:42:48,275 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:48,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:48,278 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:42:48,280 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:42:48,280 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:42:48,283 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:42:48,285 [ scc.git] DEBUG Already up to date. 2026-03-14 00:42:48,285 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-03-14 00:42:48,784 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-03-14 00:42:48,784 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-03-14 00:42:48,789 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:42:48,789 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:48,789 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:48,791 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-03-14 00:42:48,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:48,796 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-03-14 00:42:48,802 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:42:48,804 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-14 00:42:48,804 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-14 00:42:48,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:42:48,987 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:42:49,025 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:49,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:49,027 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:42:49,065 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:42:49,068 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f784cfee2d0> has no local changes 2026-03-14 00:42:49,068 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:42:49,073 [ scc.git] DEBUG [detached HEAD cbd5ae4] merge master -Dorg -Ssuccess-only 2026-03-14 00:42:49,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:42:49,073 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:42:49,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-03-14 00:42:50,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-03-14 00:42:50,021 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:42:50,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-03-14 00:42:51,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:42:51,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:42:52,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-03-14 00:42:52,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:42:52,468 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:42:52,468 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:42:52,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-03-14 00:42:52,468 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:52,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:52,471 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:42:52,473 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:42:52,473 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:42:52,476 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:42:52,482 [ scc.git] DEBUG Updating deab817..160d894 2026-03-14 00:42:53,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-03-14 00:42:53,167 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-03-14 00:42:53,573 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-03-14 00:42:53,573 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-03-14 00:42:53,576 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:42:53,577 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:53,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:53,579 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-03-14 00:42:53,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:53,583 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-03-14 00:42:53,590 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:42:53,592 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-14 00:42:53,592 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-14 00:42:53,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:42:53,766 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:42:53,803 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:42:53,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:42:53,806 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:42:53,842 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:42:53,845 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f784d013290> has no local changes 2026-03-14 00:42:53,845 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:42:53,851 [ scc.git] DEBUG [detached HEAD 87d2464] merge master -Dorg -Ssuccess-only 2026-03-14 00:42:53,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:42:53,851 [ scc.git] INFO Overriding base-branch from master to main 2026-03-14 00:42:53,851 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:42:54,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-03-14 00:42:54,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-03-14 00:42:55,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-03-14 00:42:55,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-03-14 00:42:56,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:42:56,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:42:57,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-03-14 00:42:57,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:42:57,814 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-03-14 00:42:58,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-03-14 00:42:58,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-03-14 00:42:59,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-03-14 00:42:59,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-03-14 00:43:00,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:43:00,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-03-14 00:43:01,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:43:01,151 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-03-14 00:43:01,151 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:43:01,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-03-14 00:43:01,151 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:43:01,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:01,153 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-03-14 00:43:01,156 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:43:01,156 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-03-14 00:43:01,158 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-03-14 00:43:01,165 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-03-14 00:43:01,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-03-14 00:43:02,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-03-14 00:43:02,704 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-03-14 00:43:03,111 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-03-14 00:43:03,111 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-03-14 00:43:03,114 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-03-14 00:43:03,386 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-03-14 00:43:03,386 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-03-14 00:43:03,390 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:43:03,390 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:43:03,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:03,392 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-03-14 00:43:03,395 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:03,397 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-03-14 00:43:03,405 [ scc.git] DEBUG Auto-merging README.rst 2026-03-14 00:43:03,405 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-03-14 00:43:03,405 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-03-14 00:43:03,405 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-03-14 00:43:03,405 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-14 00:43:03,405 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-14 00:43:03,408 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-03-14 00:43:03,411 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-03-14 00:43:03,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:03,581 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-03-14 00:43:03,584 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-03-14 00:43:03,586 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#88](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-03-14 00:43:03,588 [ scc.config] DEBUG Found github.token 2026-03-14 00:43:03,588 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-03-14 00:43:03,588 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-03-14 00:43:03,591 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:03,593 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-03-14 00:43:03,600 [ scc.git] DEBUG Auto-merging README.rst 2026-03-14 00:43:03,600 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-03-14 00:43:03,601 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:43:03,604 [ scc.git] DEBUG README.rst | 3 + 2026-03-14 00:43:03,604 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-03-14 00:43:03,604 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-03-14 00:43:03,604 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-03-14 00:43:03,604 [ scc.git] DEBUG setup.py | 5 +- 2026-03-14 00:43:03,604 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-03-14 00:43:03,604 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-03-14 00:43:04,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:04,005 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:43:04,044 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:43:04,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:04,047 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:43:04,083 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:43:04,086 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f784d0015d0> has no local changes 2026-03-14 00:43:04,086 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:43:04,092 [ scc.git] DEBUG [detached HEAD 2d6ad08] merge master -Dorg -Ssuccess-only 2026-03-14 00:43:04,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:04,092 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:43:04,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-03-14 00:43:05,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-03-14 00:43:05,028 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:43:05,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-03-14 00:43:06,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:43:06,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:43:07,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-03-14 00:43:07,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:43:07,466 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:43:07,466 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:43:07,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-03-14 00:43:07,466 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:43:07,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:07,468 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:43:07,471 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:43:07,471 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:43:07,473 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:43:07,476 [ scc.git] DEBUG Already up to date. 2026-03-14 00:43:07,476 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-03-14 00:43:07,763 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-03-14 00:43:07,763 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-03-14 00:43:07,767 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:43:07,767 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:43:07,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:07,769 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-03-14 00:43:07,771 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:07,773 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-03-14 00:43:07,779 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:43:07,782 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-14 00:43:07,782 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-14 00:43:07,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:07,957 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:43:07,995 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:43:07,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:07,997 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:43:08,034 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:43:08,037 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f784d00e250> has no local changes 2026-03-14 00:43:08,037 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:43:08,042 [ scc.git] DEBUG [detached HEAD aec2e7c] merge master -Dorg -Ssuccess-only 2026-03-14 00:43:08,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:08,043 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:43:08,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-03-14 00:43:09,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-03-14 00:43:09,046 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-14 00:43:09,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-03-14 00:43:10,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-14 00:43:10,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-14 00:43:11,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-03-14 00:43:11,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-03-14 00:43:11,613 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:43:11,613 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:43:11,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-03-14 00:43:11,613 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:43:11,613 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:11,615 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:43:11,618 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:43:11,618 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:43:11,620 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:43:11,623 [ scc.git] DEBUG Already up to date. 2026-03-14 00:43:11,623 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-03-14 00:43:11,903 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-03-14 00:43:11,903 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-03-14 00:43:11,907 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:43:11,907 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:43:11,907 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:11,909 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-03-14 00:43:11,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:11,914 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-03-14 00:43:11,920 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-14 00:43:11,923 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-14 00:43:11,923 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-14 00:43:12,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:12,103 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:43:12,141 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:43:12,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:12,143 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:43:12,179 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:43:12,182 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f784d04f650> has no local changes 2026-03-14 00:43:12,182 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:43:12,188 [ scc.git] DEBUG [detached HEAD 57e2964] merge master -Dorg -Ssuccess-only 2026-03-14 00:43:12,188 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:12,188 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:43:12,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-03-14 00:43:12,547 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:43:12,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-03-14 00:43:12,547 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:43:12,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:12,549 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-14 00:43:12,552 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:43:12,552 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-14 00:43:12,554 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-14 00:43:12,557 [ scc.git] DEBUG Already up to date. 2026-03-14 00:43:12,557 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:43:12,557 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:43:12,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:12,559 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:43:12,595 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:43:12,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:12,597 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:43:12,631 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:43:12,634 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f784d04fd50> has no local changes 2026-03-14 00:43:12,634 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:43:12,639 [ scc.git] DEBUG [detached HEAD a1c4581] merge master -Dorg -Ssuccess-only 2026-03-14 00:43:12,640 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:12,640 [ scc.git] INFO Overriding base-branch from master to develop 2026-03-14 00:43:12,640 [ scc.repo] DEBUG ## PRs found: 2026-03-14 00:43:12,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 2 2026-03-14 00:43:12,968 [ scc.repo] DEBUG ## Branches found: 2026-03-14 00:43:12,968 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-03-14 00:43:12,968 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:43:12,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:12,970 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-03-14 00:43:12,972 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-14 00:43:12,972 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-03-14 00:43:12,975 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-03-14 00:43:12,987 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-03-14 00:43:13,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-03-14 00:43:14,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-03-14 00:43:14,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-03-14 00:43:15,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-03-14 00:43:16,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-03-14 00:43:16,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-03-14 00:43:17,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-03-14 00:43:17,547 [ scc.git] DEBUG ## Unique users: [] 2026-03-14 00:43:17,547 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:43:17,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:17,550 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-14 00:43:17,586 [ scc.git] DEBUG Get sha1 of %s 2026-03-14 00:43:17,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-14 00:43:17,588 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:43:17,625 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:43:17,629 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f784c65ef10> has no local changes 2026-03-14 00:43:17,629 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:43:17,635 [ scc.git] DEBUG [detached HEAD c310617] merge master -Dorg -Ssuccess-only 2026-03-14 00:43:17,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:17,635 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-14 00:43:17,704 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-03-14 00:43:17,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:17,977 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-03-14 00:43:17,979 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-03-14 00:43:18,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:18,404 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-03-14 00:43:18,406 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-03-14 00:43:18,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:18,836 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-03-14 00:43:18,838 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-03-14 00:43:19,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:19,265 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-03-14 00:43:19,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:19,685 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-03-14 00:43:19,687 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-03-14 00:43:20,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:20,110 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-03-14 00:43:20,112 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-03-14 00:43:20,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:20,531 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-03-14 00:43:20,533 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-03-14 00:43:20,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:20,958 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-03-14 00:43:20,960 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-03-14 00:43:21,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:21,407 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-03-14 00:43:21,409 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-03-14 00:43:21,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:21,829 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-03-14 00:43:21,831 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-03-14 00:43:22,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:22,251 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-03-14 00:43:22,253 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-03-14 00:43:22,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:22,677 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-03-14 00:43:22,679 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-03-14 00:43:23,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:23,104 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-03-14 00:43:23,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:23,529 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-03-14 00:43:23,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:23,947 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-03-14 00:43:23,949 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-03-14 00:43:24,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:24,374 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-03-14 00:43:24,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:24,800 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-03-14 00:43:25,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:25,218 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-03-14 00:43:25,220 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-03-14 00:43:25,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:25,633 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-03-14 00:43:25,635 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-03-14 00:43:26,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:26,055 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-03-14 00:43:26,057 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-03-14 00:43:26,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:26,479 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-03-14 00:43:26,481 [ scc.config] DEBUG Found submodule.scripts.url 2026-03-14 00:43:26,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-14 00:43:26,907 [ scc.config] DEBUG Found submodule.scripts.branch 2026-03-14 00:43:26,908 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-14 00:43:26,982 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f785035eb50> has local changes 2026-03-14 00:43:26,982 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 669 will-moore 'Standalone python script' (stage: draft) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..acada9be Previously merged: - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' Conflicting PRs (not included): - PR 666 will-moore 'Standalone app' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Conflicting PRs (not included): - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#88 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/88/)' 2026-03-14 00:43:26,993 [ scc.git] DEBUG [detached HEAD 63bd646] merge master -Dorg -Ssuccess-only 2026-03-14 00:43:26,993 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-03-14 00:43:26,994 [ scc.merge] INFO Repository: ome/omero-plugins 2026-03-14 00:43:26,994 [ scc.merge] INFO Already up to date. 2026-03-14 00:43:26,994 [ scc.merge] INFO 2026-03-14 00:43:26,994 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-14 00:43:26,994 [ scc.merge] INFO 2026-03-14 00:43:26,994 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-03-14 00:43:26,994 [ scc.merge] INFO Already up to date. 2026-03-14 00:43:26,994 [ scc.merge] INFO 2026-03-14 00:43:26,994 [ scc.merge] INFO 2026-03-14 00:43:26,994 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-03-14 00:43:26,994 [ scc.merge] INFO Excluded PRs: 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-03-14 00:43:26,994 [ scc.merge] INFO Already up to date. 2026-03-14 00:43:26,994 [ scc.merge] INFO 2026-03-14 00:43:26,994 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:43:26,994 [ scc.merge] INFO 2026-03-14 00:43:26,994 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-03-14 00:43:26,994 [ scc.merge] INFO Excluded PRs: 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-03-14 00:43:26,994 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-03-14 00:43:26,994 [ scc.merge] INFO Previously merged: 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-03-14 00:43:26,994 [ scc.merge] INFO 2026-03-14 00:43:26,994 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-03-14 00:43:26,994 [ scc.merge] INFO 2026-03-14 00:43:26,994 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-03-14 00:43:26,994 [ scc.merge] INFO Excluded PRs: 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-03-14 00:43:26,994 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-03-14 00:43:26,994 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-03-14 00:43:26,994 [ scc.merge] INFO Previously merged: 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-14 00:43:26,995 [ scc.merge] INFO 2026-03-14 00:43:26,995 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-03-14 00:43:26,995 [ scc.merge] INFO 2026-03-14 00:43:26,995 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-03-14 00:43:26,995 [ scc.merge] INFO 2026-03-14 00:43:26,995 [ scc.merge] INFO Repository: ome/omero-figure 2026-03-14 00:43:26,995 [ scc.merge] INFO Excluded PRs: 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' (stage: draft) 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2026-03-14 00:43:26,995 [ scc.merge] INFO Updating 9cc36cde..acada9be 2026-03-14 00:43:26,995 [ scc.merge] INFO Previously merged: 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-03-14 00:43:26,995 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-14 00:43:26,996 [ scc.merge] INFO 2026-03-14 00:43:26,996 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-03-14 00:43:26,996 [ scc.merge] INFO 2026-03-14 00:43:26,996 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-03-14 00:43:26,996 [ scc.merge] INFO 2026-03-14 00:43:26,996 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-03-14 00:43:26,996 [ scc.merge] INFO Already up to date. 2026-03-14 00:43:26,996 [ scc.merge] INFO 2026-03-14 00:43:26,996 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:43:26,996 [ scc.merge] INFO 2026-03-14 00:43:26,996 [ scc.merge] INFO Repository: ome/omero-gallery 2026-03-14 00:43:26,996 [ scc.merge] INFO Already up to date. 2026-03-14 00:43:26,996 [ scc.merge] INFO 2026-03-14 00:43:26,996 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-03-14 00:43:26,996 [ scc.merge] INFO 2026-03-14 00:43:26,996 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-03-14 00:43:26,996 [ scc.merge] INFO 2026-03-14 00:43:26,996 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-03-14 00:43:26,996 [ scc.merge] INFO Excluded PRs: 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-03-14 00:43:26,996 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2026-03-14 00:43:26,997 [ scc.merge] INFO Updating 7a798ce..5e2de43 2026-03-14 00:43:26,997 [ scc.merge] INFO Previously merged: 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-14 00:43:26,997 [ scc.merge] INFO 2026-03-14 00:43:26,997 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-03-14 00:43:26,997 [ scc.merge] INFO 2026-03-14 00:43:26,997 [ scc.merge] INFO Repository: ome/omero-mapr 2026-03-14 00:43:26,997 [ scc.merge] INFO Excluded PRs: 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-03-14 00:43:26,997 [ scc.merge] INFO Already up to date. 2026-03-14 00:43:26,997 [ scc.merge] INFO 2026-03-14 00:43:26,997 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-14 00:43:26,997 [ scc.merge] INFO 2026-03-14 00:43:26,997 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:43:26,997 [ scc.merge] INFO 2026-03-14 00:43:26,997 [ scc.merge] INFO Repository: ome/omero-metadata 2026-03-14 00:43:26,997 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-03-14 00:43:26,997 [ scc.merge] INFO Previously merged: 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-14 00:43:26,997 [ scc.merge] INFO 2026-03-14 00:43:26,997 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-03-14 00:43:26,997 [ scc.merge] INFO 2026-03-14 00:43:26,997 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-03-14 00:43:26,997 [ scc.merge] INFO 2026-03-14 00:43:26,997 [ scc.merge] INFO Repository: ome/omero-parade 2026-03-14 00:43:26,997 [ scc.merge] INFO Excluded PRs: 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-03-14 00:43:26,997 [ scc.merge] INFO Already up to date. 2026-03-14 00:43:26,997 [ scc.merge] INFO 2026-03-14 00:43:26,997 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-03-14 00:43:26,997 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-14 00:43:26,997 [ scc.merge] INFO 2026-03-14 00:43:26,998 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-03-14 00:43:26,998 [ scc.merge] INFO Already up to date. 2026-03-14 00:43:26,998 [ scc.merge] INFO 2026-03-14 00:43:26,998 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,998 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:43:26,998 [ scc.merge] INFO 2026-03-14 00:43:26,998 [ scc.merge] INFO Repository: ome/omero-rois 2026-03-14 00:43:26,998 [ scc.merge] INFO Excluded PRs: 2026-03-14 00:43:26,998 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-03-14 00:43:26,998 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-03-14 00:43:26,998 [ scc.merge] INFO Previously merged: 2026-03-14 00:43:26,998 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-03-14 00:43:26,998 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-03-14 00:43:26,998 [ scc.merge] INFO 2026-03-14 00:43:26,998 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-14 00:43:26,998 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:43:26,998 [ scc.merge] INFO 2026-03-14 00:43:26,998 [ scc.merge] INFO Repository: ome/omero-signup 2026-03-14 00:43:26,998 [ scc.merge] INFO Already up to date. 2026-03-14 00:43:26,998 [ scc.merge] INFO 2026-03-14 00:43:26,998 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,998 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:43:26,998 [ scc.merge] INFO 2026-03-14 00:43:26,998 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-14 00:43:26,998 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-03-14 00:43:26,998 [ scc.merge] INFO 2026-03-14 00:43:26,998 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-03-14 00:43:26,998 [ scc.merge] INFO Excluded PRs: 2026-03-14 00:43:26,998 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-03-14 00:43:26,998 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-03-14 00:43:26,998 [ scc.merge] INFO Previously merged: 2026-03-14 00:43:26,998 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-03-14 00:43:26,998 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-03-14 00:43:26,998 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-03-14 00:43:26,998 [ scc.merge] INFO 2026-03-14 00:43:26,998 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,998 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-03-14 00:43:26,998 [ scc.merge] INFO 2026-03-14 00:43:26,998 [ scc.merge] INFO Repository: ome/omero-upload 2026-03-14 00:43:26,998 [ scc.merge] INFO Already up to date. 2026-03-14 00:43:26,998 [ scc.merge] INFO 2026-03-14 00:43:26,998 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,998 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:43:26,998 [ scc.merge] INFO 2026-03-14 00:43:26,998 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-03-14 00:43:26,998 [ scc.merge] INFO Updating deab817..160d894 2026-03-14 00:43:26,998 [ scc.merge] INFO Previously merged: 2026-03-14 00:43:26,998 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-03-14 00:43:26,998 [ scc.merge] INFO 2026-03-14 00:43:26,999 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,999 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:43:26,999 [ scc.merge] INFO 2026-03-14 00:43:26,999 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-03-14 00:43:26,999 [ scc.merge] INFO Excluded PRs: 2026-03-14 00:43:26,999 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-03-14 00:43:26,999 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-03-14 00:43:26,999 [ scc.merge] INFO Previously merged: 2026-03-14 00:43:26,999 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-03-14 00:43:26,999 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-03-14 00:43:26,999 [ scc.merge] INFO 2026-03-14 00:43:26,999 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,999 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-03-14 00:43:26,999 [ scc.merge] INFO 2026-03-14 00:43:26,999 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-14 00:43:26,999 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-03-14 00:43:26,999 [ scc.merge] INFO 2026-03-14 00:43:26,999 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-03-14 00:43:26,999 [ scc.merge] INFO Already up to date. 2026-03-14 00:43:26,999 [ scc.merge] INFO 2026-03-14 00:43:26,999 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,999 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:43:26,999 [ scc.merge] INFO 2026-03-14 00:43:26,999 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-03-14 00:43:26,999 [ scc.merge] INFO Already up to date. 2026-03-14 00:43:26,999 [ scc.merge] INFO 2026-03-14 00:43:26,999 [ scc.merge] INFO Merged PRs: 2026-03-14 00:43:26,999 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-14 00:43:26,999 [ scc.merge] INFO 2026-03-14 00:43:26,999 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-03-14 00:43:26,999 [ scc.merge] INFO Already up to date. 2026-03-14 00:43:26,999 [ scc.merge] INFO 2026-03-14 00:43:26,999 [ scc.merge] INFO 2026-03-14 00:43:26,999 [ scc.merge] INFO Repository: ome/scripts 2026-03-14 00:43:26,999 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-03-14 00:43:26,999 [ scc.merge] INFO Previously merged: 2026-03-14 00:43:26,999 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-03-14 00:43:26,999 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-03-14 00:43:26,999 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-03-14 00:43:26,999 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-03-14 00:43:26,999 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-03-14 00:43:26,999 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-03-14 00:43:26,999 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-03-14 00:43:26,999 [ scc.merge] INFO 2026-03-14 00:43:26,999 [ scc.merge] INFO 2026-03-14 00:43:26,999 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-03-14 00:43:26,999 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-03-14 00:43:27,002 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-03-14 00:43:27,004 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,006 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,006 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-03-14 00:43:27,006 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-03-14 00:43:27,008 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-03-14 00:43:27,010 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-03-14 00:43:27,012 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-03-14 00:43:27,014 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-03-14 00:43:27,016 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-03-14 00:43:27,018 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-03-14 00:43:27,020 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,022 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,023 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-03-14 00:43:27,023 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-03-14 00:43:27,025 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-03-14 00:43:27,027 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,029 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,029 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-03-14 00:43:27,029 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-03-14 00:43:27,031 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-03-14 00:43:27,033 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-03-14 00:43:27,035 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-03-14 00:43:27,037 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-03-14 00:43:27,039 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-03-14 00:43:27,042 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-03-14 00:43:27,044 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-14 00:43:27,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-03-14 00:43:27,046 [ scc.git] DEBUG Calling 'git remote' 2026-03-14 00:43:27,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.6-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 40b5a09] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 0c216fe] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-03-14 00:44:12,969 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-03-14 00:44:22,119 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-03-14 00:44:24,525 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-14 00:44:29,119 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-14 00:45:08,382 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS