Started by upstream project "Trigger" build number 325 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 285 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.15-py2.py3-none-any.whl.metadata (5.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.12.14-py3-none-any.whl.metadata (2.3 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.15-py2.py3-none-any.whl (9.9 kB) Using cached certifi-2024.12.14-py3-none-any.whl (164 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (146 kB) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.15 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.12.14 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.0 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-12-30 00:42:58,438 [ scc.config] DEBUG Found github.token 2024-12-30 00:42:58,441 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-30 00:42:58,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:42:59,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:42:59,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-30 00:42:59,391 [ scc.gh] DEBUG 4108 remaining from 5000 (Reset at 00:12 2024-12-30 00:42:59,393 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:42:59,401 [ scc.git] DEBUG Check current status 2024-12-30 00:42:59,401 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:42:59,405 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2024-12-30 00:42:59,406 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:42:59,456 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-30 00:42:59,691 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-30 00:43:00,450 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-30 00:43:01,113 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-30 00:43:01,117 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2024-12-30 00:43:01,120 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-30 00:43:01,253 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-30 00:43:01,257 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-30 00:43:01,260 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-30 00:43:01,264 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-30 00:43:01,444 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-30 00:43:01,486 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2024-12-30 00:43:01,875 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2024-12-30 00:43:01,879 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2024-12-30 00:43:01,897 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-30 00:43:01,900 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-30 00:43:01,903 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-30 00:43:01,965 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2024-12-30 00:43:01,983 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-30 00:43:02,008 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-30 00:43:02,011 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-30 00:43:02,015 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-30 00:43:02,020 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:02,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-12-30 00:43:02,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:03,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:03,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:03,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:03,955 [ scc.git] DEBUG Resetting... 2024-12-30 00:43:03,955 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-30 00:43:03,964 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2024-12-30 00:43:03,965 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-30 00:43:04,065 [ scc.git] DEBUG Check current status 2024-12-30 00:43:04,065 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:04,069 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2024-12-30 00:43:04,069 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:04,115 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-30 00:43:04,117 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-30 00:43:04,120 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-30 00:43:04,124 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-30 00:43:04,127 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2024-12-30 00:43:04,130 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-30 00:43:04,133 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-30 00:43:04,136 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-30 00:43:04,139 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-30 00:43:04,142 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-30 00:43:04,145 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-30 00:43:04,148 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2024-12-30 00:43:04,151 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2024-12-30 00:43:04,154 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2024-12-30 00:43:04,158 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-30 00:43:04,160 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-30 00:43:04,163 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-30 00:43:04,165 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2024-12-30 00:43:04,168 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-30 00:43:04,171 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-30 00:43:04,174 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-30 00:43:04,178 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-30 00:43:04,178 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-30 00:43:04,179 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-30 00:43:04,179 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-30 00:43:04,179 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-30 00:43:04,179 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-30 00:43:04,179 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:43:04,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-12-30 00:43:04,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2024-12-30 00:43:04,904 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-30 00:43:04,904 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2024-12-30 00:43:04,904 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:43:04,904 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:43:04,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:43:04,909 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:43:04,914 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:43:04,914 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:43:04,919 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:43:04,923 [ scc.git] DEBUG Already up to date. 2024-12-30 00:43:04,924 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2024-12-30 00:43:05,229 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-30 00:43:05,230 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2024-12-30 00:43:05,236 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:43:05,236 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:43:05,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:43:05,240 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2024-12-30 00:43:05,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:43:05,336 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2024-12-30 00:43:05,352 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:43:05,354 [ scc.git] DEBUG scripts | 2 +- 2024-12-30 00:43:05,354 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-12-30 00:43:05,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:43:05,495 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:43:05,564 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2024-12-30 00:43:05,565 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:43:05,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:43:05,569 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:43:07,072 [ scc.git] DEBUG has no local changes 2024-12-30 00:43:07,072 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:43:07,146 [ scc.git] DEBUG [detached HEAD e11aa06] merge master -Dorg -Snone 2024-12-30 00:43:07,146 [ scc.merge] INFO Repository: ome/omero-plugins 2024-12-30 00:43:07,146 [ scc.merge] INFO Already up to date. 2024-12-30 00:43:07,146 [ scc.merge] INFO 2024-12-30 00:43:07,146 [ scc.merge] INFO Merged PRs: 2024-12-30 00:43:07,146 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2024-12-30 00:43:07,146 [ scc.merge] INFO 2024-12-30 00:43:07,146 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-30 00:43:07,146 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-12-30 00:43:14,908 [ scc.config] DEBUG Found github.token 2024-12-30 00:43:14,911 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-30 00:43:15,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:43:15,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:43:15,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-30 00:43:15,861 [ scc.gh] DEBUG 4098 remaining from 5000 (Reset at 00:12 2024-12-30 00:43:15,862 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:15,867 [ scc.git] DEBUG Check current status 2024-12-30 00:43:15,867 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:15,871 [ scc.git] DEBUG e11aa06 merge master -Dorg -Snone 2024-12-30 00:43:15,871 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:15,922 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-30 00:43:15,926 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-30 00:43:15,929 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-30 00:43:15,932 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-30 00:43:15,936 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2024-12-30 00:43:15,938 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-30 00:43:15,942 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-30 00:43:15,947 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-30 00:43:15,952 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-30 00:43:15,956 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-30 00:43:15,960 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-30 00:43:15,963 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2024-12-30 00:43:15,966 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2024-12-30 00:43:15,970 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2024-12-30 00:43:15,973 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-30 00:43:15,977 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-30 00:43:15,979 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-30 00:43:15,982 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2024-12-30 00:43:15,985 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-30 00:43:15,988 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-30 00:43:15,991 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-30 00:43:15,995 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2024-12-30 00:43:16,000 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:16,000 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-12-30 00:43:16,002 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-12-30 00:43:16,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-12-30 00:43:16,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:17,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:17,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:18,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:18,077 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:18,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-30 00:43:18,149 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:18,153 [ scc.git] DEBUG Check current status 2024-12-30 00:43:18,153 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:18,156 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2024-12-30 00:43:18,156 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:18,195 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:18,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-12-30 00:43:19,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:19,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:19,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:20,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:20,238 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:20,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:20,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-30 00:43:20,283 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:20,287 [ scc.git] DEBUG Check current status 2024-12-30 00:43:20,287 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:20,291 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2024-12-30 00:43:20,292 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:20,338 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:20,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-12-30 00:43:21,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:21,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:21,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:22,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:22,388 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:22,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:22,431 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-30 00:43:22,431 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:22,435 [ scc.git] DEBUG Check current status 2024-12-30 00:43:22,435 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:22,439 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2024-12-30 00:43:22,439 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:22,483 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:22,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-12-30 00:43:23,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:23,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:24,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:24,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:24,497 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:24,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:24,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-30 00:43:24,537 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:24,541 [ scc.git] DEBUG Check current status 2024-12-30 00:43:24,541 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:24,545 [ scc.git] DEBUG 11d3587 Merge pull request #165 from jburel/build 2024-12-30 00:43:24,545 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:24,587 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:25,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-12-30 00:43:25,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:25,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:26,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:26,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:26,712 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:26,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:26,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-30 00:43:26,752 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:26,756 [ scc.git] DEBUG Check current status 2024-12-30 00:43:26,756 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:26,762 [ scc.git] DEBUG fb316a7e Bump version: 7.2.0 → 7.2.1.dev0 2024-12-30 00:43:26,762 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:26,810 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:27,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-12-30 00:43:27,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:28,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:28,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:28,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:28,850 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:28,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:28,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-30 00:43:28,894 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:28,897 [ scc.git] DEBUG Check current status 2024-12-30 00:43:28,897 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:28,901 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2024-12-30 00:43:28,901 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:28,941 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:29,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-12-30 00:43:29,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:30,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:30,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:31,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:31,014 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:31,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:31,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-30 00:43:31,059 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:31,064 [ scc.git] DEBUG Check current status 2024-12-30 00:43:31,064 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:31,069 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2024-12-30 00:43:31,069 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:31,116 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:31,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-12-30 00:43:31,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:32,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:32,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:33,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:33,163 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:33,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:33,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-30 00:43:33,206 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:33,211 [ scc.git] DEBUG Check current status 2024-12-30 00:43:33,211 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:33,216 [ scc.git] DEBUG b4102d4 add dev 2024-12-30 00:43:33,216 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:33,272 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:33,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-12-30 00:43:34,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:34,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:34,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:35,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:35,368 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:35,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:35,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-30 00:43:35,411 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:35,416 [ scc.git] DEBUG Check current status 2024-12-30 00:43:35,416 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:35,420 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2024-12-30 00:43:35,420 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:35,468 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:35,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-12-30 00:43:36,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:36,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:37,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:37,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:37,542 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:37,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:37,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-30 00:43:37,582 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:37,586 [ scc.git] DEBUG Check current status 2024-12-30 00:43:37,587 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:37,591 [ scc.git] DEBUG 3cd120c Merge pull request #89 from jburel/build 2024-12-30 00:43:37,591 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:37,633 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:38,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-12-30 00:43:38,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:38,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:39,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:39,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:39,693 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:39,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:39,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-30 00:43:39,743 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:39,748 [ scc.git] DEBUG Check current status 2024-12-30 00:43:39,749 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:39,753 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2024-12-30 00:43:39,753 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:39,797 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:40,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-12-30 00:43:40,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:40,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:41,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:41,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:41,800 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:41,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:41,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-30 00:43:41,840 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:41,845 [ scc.git] DEBUG Check current status 2024-12-30 00:43:41,845 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:41,849 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2024-12-30 00:43:41,849 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:41,893 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:42,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-12-30 00:43:42,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:43,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:43,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:43,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:43,898 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:43,938 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:43,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-30 00:43:43,939 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:43,943 [ scc.git] DEBUG Check current status 2024-12-30 00:43:43,943 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:43,947 [ scc.git] DEBUG bdfeb5e bump sphinx version 2024-12-30 00:43:43,947 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:43,991 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:44,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-12-30 00:43:44,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:45,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:45,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:46,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:46,091 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:46,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:46,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-30 00:43:46,134 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:46,138 [ scc.git] DEBUG Check current status 2024-12-30 00:43:46,139 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:46,143 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2024-12-30 00:43:46,143 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:46,186 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:46,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-12-30 00:43:47,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:47,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:47,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:48,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:48,246 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:48,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:48,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-30 00:43:48,288 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:48,294 [ scc.git] DEBUG Check current status 2024-12-30 00:43:48,294 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:48,299 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-12-30 00:43:48,299 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:48,343 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:48,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-30 00:43:48,665 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-30 00:43:48,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-12-30 00:43:49,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:49,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:50,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:50,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:50,671 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:50,713 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:50,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-30 00:43:50,714 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:50,719 [ scc.git] DEBUG Check current status 2024-12-30 00:43:50,719 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:50,725 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2024-12-30 00:43:50,725 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:50,773 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:51,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-12-30 00:43:51,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:51,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:52,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:52,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:52,779 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:52,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:52,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-30 00:43:52,821 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:52,826 [ scc.git] DEBUG Check current status 2024-12-30 00:43:52,826 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:52,831 [ scc.git] DEBUG deab817 update setup-python to v4 2024-12-30 00:43:52,831 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:52,878 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:53,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-12-30 00:43:53,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:54,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:54,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:55,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:55,107 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:55,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:55,148 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-30 00:43:55,148 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:55,153 [ scc.git] DEBUG Check current status 2024-12-30 00:43:55,153 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:55,157 [ scc.git] DEBUG 8f3c313 Merge pull request #17 from jburel/build 2024-12-30 00:43:55,158 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:55,200 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:55,200 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-12-30 00:43:55,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-12-30 00:43:56,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:56,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:56,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:57,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:57,251 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:57,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:57,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-30 00:43:57,291 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:57,296 [ scc.git] DEBUG Check current status 2024-12-30 00:43:57,297 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:57,301 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2024-12-30 00:43:57,301 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:57,345 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:57,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-30 00:43:57,662 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-30 00:43:57,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-12-30 00:43:58,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:43:58,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:43:59,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:43:59,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:43:59,514 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:43:59,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:43:59,561 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-30 00:43:59,561 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:43:59,566 [ scc.git] DEBUG Check current status 2024-12-30 00:43:59,566 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:43:59,571 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2024-12-30 00:43:59,571 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:43:59,620 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:43:59,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-30 00:43:59,952 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-30 00:44:00,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-12-30 00:44:00,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:44:01,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:44:01,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:44:01,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:44:01,846 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:44:01,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:44:01,890 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-30 00:44:01,890 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:44:01,896 [ scc.git] DEBUG Check current status 2024-12-30 00:44:01,896 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:44:01,901 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-12-30 00:44:01,901 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:44:01,946 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:44:02,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-12-30 00:44:02,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:44:03,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:44:03,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:44:04,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:44:04,010 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:44:04,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:44:04,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-30 00:44:04,051 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-30 00:44:04,056 [ scc.git] DEBUG Check current status 2024-12-30 00:44:04,056 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:44:04,062 [ scc.git] DEBUG 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2024-12-30 00:44:04,063 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:44:04,109 [ scc.config] DEBUG Found remote.origin.url 2024-12-30 00:44:04,109 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-12-30 00:44:04,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-30 00:44:04,422 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-30 00:44:04,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-12-30 00:44:05,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-30 00:44:05,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-30 00:44:06,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-30 00:44:06,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-30 00:44:06,440 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:44:06,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:44:06,483 [ scc.git] DEBUG Resetting... 2024-12-30 00:44:06,483 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-30 00:44:06,493 [ scc.git] DEBUG HEAD is now at e11aa06 merge master -Dorg -Snone 2024-12-30 00:44:06,494 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-30 00:44:06,601 [ scc.git] DEBUG Check current status 2024-12-30 00:44:06,602 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-30 00:44:06,607 [ scc.git] DEBUG e11aa06 merge master -Dorg -Snone 2024-12-30 00:44:06,607 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-30 00:44:06,657 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-30 00:44:06,660 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-30 00:44:06,663 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-30 00:44:06,666 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-30 00:44:06,669 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2024-12-30 00:44:06,672 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-30 00:44:06,675 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-30 00:44:06,678 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-30 00:44:06,681 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-30 00:44:06,684 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-30 00:44:06,687 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-30 00:44:06,690 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2024-12-30 00:44:06,694 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2024-12-30 00:44:06,698 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2024-12-30 00:44:06,701 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-30 00:44:06,704 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-30 00:44:06,707 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-30 00:44:06,709 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2024-12-30 00:44:06,712 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-30 00:44:06,715 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-30 00:44:06,718 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-30 00:44:06,722 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2024-12-30 00:44:06,723 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-30 00:44:06,723 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-30 00:44:06,723 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-30 00:44:06,723 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-30 00:44:06,723 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-30 00:44:06,723 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-12-30 00:44:06,723 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:44:06,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-12-30 00:44:07,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2024-12-30 00:44:07,416 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-30 00:44:07,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2024-12-30 00:44:08,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:44:08,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2024-12-30 00:44:09,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:44:09,385 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2024-12-30 00:44:09,386 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:44:09,386 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:09,386 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:09,393 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:44:09,400 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:44:09,401 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:44:09,408 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:44:09,415 [ scc.git] DEBUG Already up to date. 2024-12-30 00:44:09,415 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2024-12-30 00:44:09,746 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-30 00:44:09,746 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2024-12-30 00:44:09,754 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:44:09,755 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:09,755 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:09,760 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2024-12-30 00:44:09,765 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:09,771 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2024-12-30 00:44:09,777 [ scc.git] DEBUG Already up to date. 2024-12-30 00:44:09,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:44:09,912 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:44:10,013 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:10,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:10,025 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:44:10,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-12-30 00:44:10,335 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:44:10,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-30 00:44:10,335 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:10,335 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:10,341 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:44:10,347 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:44:10,348 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:44:10,353 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:44:10,360 [ scc.git] DEBUG Already up to date. 2024-12-30 00:44:10,360 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:44:10,360 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:10,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:10,365 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:44:10,406 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:10,406 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:10,411 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:44:10,451 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:44:10,457 [ scc.git] DEBUG has no local changes 2024-12-30 00:44:10,457 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:44:10,467 [ scc.git] DEBUG [detached HEAD 8072374] merge master -Dorg -Ssuccess-only 2024-12-30 00:44:10,467 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:44:10,468 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:44:10,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-12-30 00:44:11,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-12-30 00:44:11,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-12-30 00:44:11,840 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:44:11,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-30 00:44:11,840 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:11,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:11,848 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:44:11,855 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:44:11,855 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:44:11,863 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:44:11,871 [ scc.git] DEBUG Already up to date. 2024-12-30 00:44:11,871 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:44:11,871 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:11,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:11,879 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:44:11,926 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:11,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:11,934 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:44:11,999 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:44:12,010 [ scc.git] DEBUG has no local changes 2024-12-30 00:44:12,010 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:44:12,023 [ scc.git] DEBUG [detached HEAD 99670f2] merge master -Dorg -Ssuccess-only 2024-12-30 00:44:12,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:44:12,024 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:44:12,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-12-30 00:44:12,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-12-30 00:44:13,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-12-30 00:44:13,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2024-12-30 00:44:14,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:44:14,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-30 00:44:15,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2024-12-30 00:44:15,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:44:15,784 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-12-30 00:44:16,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-12-30 00:44:16,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-12-30 00:44:16,707 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:44:16,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-30 00:44:16,707 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:16,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:16,713 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:44:16,718 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:44:16,718 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:44:16,723 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:44:16,729 [ scc.git] DEBUG Already up to date. 2024-12-30 00:44:16,730 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-12-30 00:44:17,343 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-12-30 00:44:17,343 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-12-30 00:44:17,348 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:44:17,348 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:17,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:17,354 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2024-12-30 00:44:17,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:17,365 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2024-12-30 00:44:17,384 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:44:17,388 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2024-12-30 00:44:17,388 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2024-12-30 00:44:17,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:44:17,518 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:44:17,559 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:17,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:17,565 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:44:17,609 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:44:17,616 [ scc.git] DEBUG has no local changes 2024-12-30 00:44:17,617 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:44:17,627 [ scc.git] DEBUG [detached HEAD 18c6c94] merge master -Dorg -Ssuccess-only 2024-12-30 00:44:17,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:44:17,628 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:44:18,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-12-30 00:44:18,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-12-30 00:44:18,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-12-30 00:44:19,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-12-30 00:44:19,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-30 00:44:20,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:44:20,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-30 00:44:21,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-30 00:44:21,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-12-30 00:44:22,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-30 00:44:22,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-12-30 00:44:22,813 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-12-30 00:44:23,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-12-30 00:44:23,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-12-30 00:44:24,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-12-30 00:44:24,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-12-30 00:44:25,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:44:25,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-12-30 00:44:26,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:44:26,013 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-12-30 00:44:26,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-12-30 00:44:27,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-12-30 00:44:27,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-12-30 00:44:27,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:44:28,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-12-30 00:44:28,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:44:28,844 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-12-30 00:44:28,845 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:44:28,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-30 00:44:28,845 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:28,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:28,852 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:44:28,857 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:44:28,857 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:44:28,862 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:44:28,868 [ scc.git] DEBUG Already up to date. 2024-12-30 00:44:28,869 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-12-30 00:44:29,187 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-30 00:44:29,187 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-12-30 00:44:29,192 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-12-30 00:44:29,586 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-30 00:44:29,586 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-12-30 00:44:29,591 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-12-30 00:44:29,999 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-30 00:44:29,999 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-12-30 00:44:30,005 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:44:30,005 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:30,005 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:30,012 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-30 00:44:30,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:30,026 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-30 00:44:30,074 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-12-30 00:44:30,074 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-30 00:44:30,074 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-12-30 00:44:30,074 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-30 00:44:30,075 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-30 00:44:30,083 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-30 00:44:30,091 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-12-30 00:44:30,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:44:30,235 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-30 00:44:30,244 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-30 00:44:30,251 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#291](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-12-30 00:44:30,257 [ scc.config] DEBUG Found github.token 2024-12-30 00:44:30,257 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-12-30 00:44:30,258 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-30 00:44:30,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:30,272 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-30 00:44:30,290 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-12-30 00:44:30,290 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-12-30 00:44:30,290 [ scc.git] DEBUG Auto-merging setup.py 2024-12-30 00:44:30,290 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-12-30 00:44:30,290 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-30 00:44:30,291 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-30 00:44:30,291 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-12-30 00:44:30,291 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-12-30 00:44:30,291 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-30 00:44:30,297 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-30 00:44:30,304 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-12-30 00:44:30,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:44:30,645 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-30 00:44:30,653 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-30 00:44:30,659 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#291](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-12-30 00:44:30,664 [ scc.config] DEBUG Found github.token 2024-12-30 00:44:30,664 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-12-30 00:44:30,664 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-12-30 00:44:30,672 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:30,678 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-12-30 00:44:30,693 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-12-30 00:44:30,694 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-30 00:44:30,694 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:44:30,698 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-12-30 00:44:30,698 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-12-30 00:44:30,698 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-12-30 00:44:30,698 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-12-30 00:44:30,698 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-12-30 00:44:30,698 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-12-30 00:44:31,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:44:31,039 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:44:31,080 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:31,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:31,086 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:44:31,128 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:44:31,136 [ scc.git] DEBUG has no local changes 2024-12-30 00:44:31,136 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:44:31,145 [ scc.git] DEBUG [detached HEAD 9a204ee] merge master -Dorg -Ssuccess-only 2024-12-30 00:44:31,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:44:31,145 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:44:31,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-12-30 00:44:32,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None 2024-12-30 00:44:32,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2024-12-30 00:44:33,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2024-12-30 00:44:33,007 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:44:33,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-30 00:44:33,007 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:33,007 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:33,014 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:44:33,020 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:44:33,020 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:44:33,026 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:44:33,032 [ scc.git] DEBUG Already up to date. 2024-12-30 00:44:33,032 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:44:33,032 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:33,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:33,038 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:44:33,081 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:33,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:33,087 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:44:33,131 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:44:33,139 [ scc.git] DEBUG has no local changes 2024-12-30 00:44:33,139 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:44:33,151 [ scc.git] DEBUG [detached HEAD c5a4dd43] merge master -Dorg -Ssuccess-only 2024-12-30 00:44:33,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:44:33,152 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:44:33,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-12-30 00:44:34,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-12-30 00:44:34,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-12-30 00:44:35,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-12-30 00:44:35,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:44:36,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-12-30 00:44:36,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:44:36,649 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-12-30 00:44:36,649 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:44:36,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-30 00:44:36,649 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:36,649 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:36,655 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:44:36,660 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:44:36,660 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:44:36,665 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:44:36,670 [ scc.git] DEBUG Already up to date. 2024-12-30 00:44:36,670 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-12-30 00:44:37,005 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-12-30 00:44:37,006 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-12-30 00:44:37,010 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:44:37,011 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:37,011 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:37,016 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-12-30 00:44:37,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:37,027 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-12-30 00:44:37,127 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-12-30 00:44:37,127 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:44:37,130 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-12-30 00:44:37,130 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-12-30 00:44:37,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:44:37,272 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:44:37,312 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:37,312 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:37,317 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:44:37,354 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:44:37,360 [ scc.git] DEBUG has no local changes 2024-12-30 00:44:37,361 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:44:37,368 [ scc.git] DEBUG [detached HEAD 0a8f3c1] merge master -Dorg -Ssuccess-only 2024-12-30 00:44:37,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:44:37,369 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:44:37,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-12-30 00:44:38,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2024-12-30 00:44:38,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2024-12-30 00:44:39,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2024-12-30 00:44:39,291 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-30 00:44:39,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-12-30 00:44:40,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:44:40,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-30 00:44:41,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-12-30 00:44:42,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:44:42,022 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-12-30 00:44:42,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2024-12-30 00:44:42,491 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-30 00:44:43,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-12-30 00:44:43,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:44:44,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-30 00:44:44,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-12-30 00:44:45,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:44:45,152 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-12-30 00:44:45,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2024-12-30 00:44:45,657 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-30 00:44:46,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-12-30 00:44:46,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:44:47,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-30 00:44:47,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-12-30 00:44:48,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:44:48,012 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-12-30 00:44:48,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2024-12-30 00:44:48,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2024-12-30 00:44:48,908 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-30 00:44:49,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-12-30 00:44:49,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:44:50,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-30 00:44:50,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-12-30 00:44:51,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:44:51,301 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-12-30 00:44:51,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2024-12-30 00:44:51,767 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-30 00:44:52,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-12-30 00:44:52,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:44:53,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-30 00:44:53,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-12-30 00:44:54,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:44:54,097 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-12-30 00:44:54,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2024-12-30 00:44:54,566 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-30 00:44:55,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-12-30 00:44:55,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:44:56,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-30 00:44:56,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-12-30 00:44:56,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:44:56,924 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-12-30 00:44:56,924 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:44:56,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-30 00:44:56,925 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:56,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:56,930 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:44:56,935 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:44:56,936 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:44:56,941 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:44:56,946 [ scc.git] DEBUG Already up to date. 2024-12-30 00:44:56,947 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2024-12-30 00:44:57,274 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-30 00:44:57,275 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2024-12-30 00:44:57,280 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2024-12-30 00:44:57,582 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-30 00:44:57,582 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2024-12-30 00:44:57,587 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2024-12-30 00:44:57,887 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-30 00:44:57,887 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2024-12-30 00:44:57,893 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2024-12-30 00:44:58,178 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-30 00:44:58,178 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2024-12-30 00:44:58,183 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2024-12-30 00:44:58,473 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-30 00:44:58,473 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2024-12-30 00:44:58,478 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2024-12-30 00:44:58,758 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-30 00:44:58,758 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2024-12-30 00:44:58,763 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:44:58,763 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:44:58,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:58,770 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-12-30 00:44:58,824 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:58,830 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-12-30 00:44:58,890 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:44:58,895 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2024-12-30 00:44:58,895 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2024-12-30 00:44:59,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:44:59,039 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-12-30 00:44:59,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:59,102 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-12-30 00:44:59,287 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-30 00:44:59,288 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:44:59,293 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2024-12-30 00:44:59,293 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2024-12-30 00:44:59,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:44:59,429 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-30 00:44:59,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:59,452 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-30 00:44:59,576 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-30 00:44:59,576 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-12-30 00:44:59,576 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-30 00:44:59,577 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-30 00:44:59,583 [ scc.git] DEBUG Calling 'git reset --hard 5391622a4ef8c97571be62f215e9c384e186a0f8' 2024-12-30 00:44:59,590 [ scc.git] DEBUG HEAD is now at 5391622 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2024-12-30 00:44:59,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:44:59,821 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-30 00:44:59,828 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-12-30 00:44:59,834 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#291](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2024-12-30 00:44:59,840 [ scc.config] DEBUG Found github.token 2024-12-30 00:44:59,841 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2024-12-30 00:44:59,841 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-12-30 00:44:59,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:44:59,867 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-12-30 00:44:59,957 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-30 00:44:59,958 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:44:59,963 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2024-12-30 00:44:59,963 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2024-12-30 00:45:00,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:45:00,207 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-12-30 00:45:00,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:00,225 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-12-30 00:45:00,258 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-30 00:45:00,258 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:45:00,263 [ scc.git] DEBUG package-lock.json | 6 +++--- 2024-12-30 00:45:00,263 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2024-12-30 00:45:00,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:45:00,623 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-30 00:45:00,636 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:00,642 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-30 00:45:00,721 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-30 00:45:00,722 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-12-30 00:45:00,722 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-30 00:45:00,722 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-30 00:45:00,730 [ scc.git] DEBUG Calling 'git reset --hard e7d6d8df0cf7a20decbd7a9dcbf4d879d890c111' 2024-12-30 00:45:00,738 [ scc.git] DEBUG HEAD is now at e7d6d8d merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2024-12-30 00:45:01,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:45:01,010 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-30 00:45:01,016 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-12-30 00:45:01,022 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#291](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2024-12-30 00:45:01,027 [ scc.config] DEBUG Found github.token 2024-12-30 00:45:01,027 [ scc.git] DEBUG Adding comment to issue #118. 2024-12-30 00:45:01,727 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 201 2394 2024-12-30 00:45:01,728 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:45:01,773 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:01,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:01,779 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:45:01,823 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:45:01,831 [ scc.git] DEBUG has no local changes 2024-12-30 00:45:01,831 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:45:01,841 [ scc.git] DEBUG [detached HEAD 4bc2da1] merge master -Dorg -Ssuccess-only 2024-12-30 00:45:01,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:45:01,842 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:45:02,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-12-30 00:45:02,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2024-12-30 00:45:02,745 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-30 00:45:03,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2024-12-30 00:45:03,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:45:04,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-30 00:45:04,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2024-12-30 00:45:05,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:45:05,335 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2024-12-30 00:45:05,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2024-12-30 00:45:06,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2024-12-30 00:45:06,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-12-30 00:45:07,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-12-30 00:45:07,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-12-30 00:45:08,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:45:08,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-30 00:45:09,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-12-30 00:45:09,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:45:09,582 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-12-30 00:45:10,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-12-30 00:45:10,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-12-30 00:45:11,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-12-30 00:45:11,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:45:12,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-30 00:45:12,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-12-30 00:45:13,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:45:13,131 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-12-30 00:45:13,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-12-30 00:45:14,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-12-30 00:45:14,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-12-30 00:45:15,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:45:15,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-12-30 00:45:15,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:45:15,993 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-12-30 00:45:15,993 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:45:15,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-30 00:45:15,994 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:15,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:16,003 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:45:16,008 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:45:16,008 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:45:16,014 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:45:16,020 [ scc.git] DEBUG Already up to date. 2024-12-30 00:45:16,020 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-12-30 00:45:17,084 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-30 00:45:17,084 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-12-30 00:45:17,089 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-12-30 00:45:18,421 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-30 00:45:18,421 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-12-30 00:45:18,428 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-12-30 00:45:18,908 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-30 00:45:18,908 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-12-30 00:45:18,915 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2024-12-30 00:45:19,210 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-30 00:45:19,211 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2024-12-30 00:45:19,215 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:45:19,215 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:19,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:19,221 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-12-30 00:45:19,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:19,232 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-12-30 00:45:19,557 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-12-30 00:45:19,558 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:45:19,562 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-12-30 00:45:19,563 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-12-30 00:45:19,563 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-12-30 00:45:19,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:45:19,697 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-12-30 00:45:19,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:19,711 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-12-30 00:45:20,034 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-12-30 00:45:20,035 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-12-30 00:45:20,035 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-12-30 00:45:20,035 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-12-30 00:45:20,035 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:45:20,040 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-12-30 00:45:20,040 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-12-30 00:45:20,040 [ scc.git] DEBUG src/app/header.html | 5 + 2024-12-30 00:45:20,040 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-12-30 00:45:20,040 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-12-30 00:45:20,040 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-12-30 00:45:20,040 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-12-30 00:45:20,040 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-12-30 00:45:20,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:45:20,207 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-12-30 00:45:20,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:20,225 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-12-30 00:45:20,643 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-12-30 00:45:20,644 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:45:20,647 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-12-30 00:45:20,647 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-12-30 00:45:20,647 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-12-30 00:45:20,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:45:20,780 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2024-12-30 00:45:20,859 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:20,866 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2024-12-30 00:45:20,953 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:45:20,971 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2024-12-30 00:45:20,971 [ scc.git] DEBUG package.json | 2 +- 2024-12-30 00:45:20,971 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2024-12-30 00:45:21,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:45:21,166 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:45:21,213 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:21,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:21,222 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:45:21,267 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:45:21,279 [ scc.git] DEBUG has no local changes 2024-12-30 00:45:21,279 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:45:21,290 [ scc.git] DEBUG [detached HEAD 59c24be] merge master -Dorg -Ssuccess-only 2024-12-30 00:45:21,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:45:21,291 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:45:21,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-12-30 00:45:22,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-12-30 00:45:22,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-12-30 00:45:23,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-12-30 00:45:23,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:45:24,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-12-30 00:45:24,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:45:24,571 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-12-30 00:45:24,571 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:45:24,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-30 00:45:24,571 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:24,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:24,581 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:45:24,587 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:45:24,588 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:45:24,594 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:45:24,602 [ scc.git] DEBUG Already up to date. 2024-12-30 00:45:24,602 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-12-30 00:45:25,423 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-12-30 00:45:25,423 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-12-30 00:45:25,429 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:45:25,430 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:25,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:25,439 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-12-30 00:45:25,453 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:25,462 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-12-30 00:45:25,479 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:45:25,484 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-12-30 00:45:25,484 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-12-30 00:45:25,484 [ scc.git] DEBUG requirements.txt | 2 +- 2024-12-30 00:45:25,484 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-12-30 00:45:25,484 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-12-30 00:45:25,487 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-12-30 00:45:25,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:45:25,625 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:45:25,680 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:25,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:25,688 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:45:25,744 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:45:25,752 [ scc.git] DEBUG has no local changes 2024-12-30 00:45:25,752 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:45:25,763 [ scc.git] DEBUG [detached HEAD b9c64f0] merge master -Dorg -Ssuccess-only 2024-12-30 00:45:25,763 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:45:25,763 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:45:26,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-12-30 00:45:26,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-12-30 00:45:27,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-12-30 00:45:27,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-12-30 00:45:28,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:45:28,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-12-30 00:45:29,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:45:29,013 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-12-30 00:45:29,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-12-30 00:45:29,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-12-30 00:45:30,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-12-30 00:45:30,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:45:31,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-12-30 00:45:31,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:45:31,811 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-12-30 00:45:31,811 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:45:31,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-30 00:45:31,811 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:31,811 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:31,820 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:45:31,825 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:45:31,825 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:45:31,830 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:45:31,835 [ scc.git] DEBUG Already up to date. 2024-12-30 00:45:31,835 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-12-30 00:45:32,375 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-12-30 00:45:32,375 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-12-30 00:45:32,380 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-12-30 00:45:32,956 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-12-30 00:45:32,956 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-12-30 00:45:32,963 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:45:32,963 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:32,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:32,971 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-30 00:45:32,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:32,985 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-30 00:45:33,276 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-12-30 00:45:33,276 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-12-30 00:45:33,276 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-12-30 00:45:33,276 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-12-30 00:45:33,276 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-30 00:45:33,277 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-30 00:45:33,283 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-30 00:45:33,290 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2024-12-30 00:45:33,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:45:33,437 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-30 00:45:33,445 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-30 00:45:33,543 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#291](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-12-30 00:45:33,548 [ scc.config] DEBUG Found github.token 2024-12-30 00:45:33,548 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-12-30 00:45:33,549 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-30 00:45:33,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:33,561 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-30 00:45:33,631 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-12-30 00:45:33,631 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-12-30 00:45:33,631 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-12-30 00:45:33,631 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-30 00:45:33,632 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-30 00:45:33,639 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-30 00:45:33,647 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2024-12-30 00:45:33,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:45:33,888 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-30 00:45:33,896 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-30 00:45:33,903 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#291](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-12-30 00:45:33,909 [ scc.config] DEBUG Found github.token 2024-12-30 00:45:33,909 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-12-30 00:45:33,910 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:45:33,955 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:33,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:33,961 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:45:34,006 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:45:34,014 [ scc.git] DEBUG has no local changes 2024-12-30 00:45:34,015 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:45:34,031 [ scc.git] DEBUG [detached HEAD 41b83f7] merge master -Dorg -Ssuccess-only 2024-12-30 00:45:34,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:45:34,032 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:45:34,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-12-30 00:45:34,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2024-12-30 00:45:35,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-12-30 00:45:35,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-12-30 00:45:36,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-12-30 00:45:36,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-12-30 00:45:37,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-12-30 00:45:37,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-12-30 00:45:37,760 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:45:37,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-30 00:45:37,760 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:37,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:37,766 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:45:37,771 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:45:37,771 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:45:37,777 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:45:37,782 [ scc.git] DEBUG Already up to date. 2024-12-30 00:45:37,783 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:45:37,783 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:37,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:37,787 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:45:37,830 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:37,830 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:37,836 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:45:37,878 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:45:37,887 [ scc.git] DEBUG has no local changes 2024-12-30 00:45:37,887 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:45:37,898 [ scc.git] DEBUG [detached HEAD 8cab1d7] merge master -Dorg -Ssuccess-only 2024-12-30 00:45:37,899 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:45:37,899 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:45:38,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2 2024-12-30 00:45:38,143 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:45:38,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-30 00:45:38,143 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:38,143 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:38,149 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:45:38,157 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:45:38,157 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:45:38,164 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:45:38,171 [ scc.git] DEBUG Already up to date. 2024-12-30 00:45:38,172 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:45:38,172 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:38,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:38,178 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:45:38,223 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:38,223 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:38,229 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:45:38,279 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:45:38,285 [ scc.git] DEBUG has no local changes 2024-12-30 00:45:38,286 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:45:38,294 [ scc.git] DEBUG [detached HEAD ce415bb] merge master -Dorg -Ssuccess-only 2024-12-30 00:45:38,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:45:38,295 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:45:38,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-12-30 00:45:39,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-12-30 00:45:39,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-12-30 00:45:40,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-12-30 00:45:40,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:45:40,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-12-30 00:45:41,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:45:41,354 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-12-30 00:45:41,354 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:45:41,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-30 00:45:41,354 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:41,354 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:41,362 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:45:41,368 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:45:41,368 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:45:41,376 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:45:41,382 [ scc.git] DEBUG Already up to date. 2024-12-30 00:45:41,382 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-12-30 00:45:41,963 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-12-30 00:45:41,963 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-12-30 00:45:41,969 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:45:41,969 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:41,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:41,976 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-12-30 00:45:41,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:41,990 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-12-30 00:45:42,001 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-12-30 00:45:42,002 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:45:42,004 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-12-30 00:45:42,004 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-12-30 00:45:42,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:45:42,144 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:45:42,187 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:42,187 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:42,193 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:45:42,235 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:45:42,242 [ scc.git] DEBUG has no local changes 2024-12-30 00:45:42,243 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:45:42,252 [ scc.git] DEBUG [detached HEAD a91fdd4] merge master -Dorg -Ssuccess-only 2024-12-30 00:45:42,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:45:42,253 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:45:42,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-12-30 00:45:43,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-12-30 00:45:43,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-12-30 00:45:44,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-12-30 00:45:44,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:45:45,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-12-30 00:45:45,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:45:45,476 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-12-30 00:45:45,476 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:45:45,476 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-30 00:45:45,476 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:45,476 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:45,482 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:45:45,488 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:45:45,488 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:45:45,494 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:45:45,500 [ scc.git] DEBUG Already up to date. 2024-12-30 00:45:45,500 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-12-30 00:45:45,919 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-12-30 00:45:45,919 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-12-30 00:45:45,925 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:45:45,925 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:45,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:45,932 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-30 00:45:45,940 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:45,947 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-30 00:45:46,134 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-12-30 00:45:46,135 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-12-30 00:45:46,135 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-12-30 00:45:46,135 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-12-30 00:45:46,135 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-12-30 00:45:46,135 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-12-30 00:45:46,135 [ scc.git] DEBUG Auto-merging setup.py 2024-12-30 00:45:46,135 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-12-30 00:45:46,135 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-30 00:45:46,135 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-30 00:45:46,143 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2024-12-30 00:45:46,152 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2024-12-30 00:45:46,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:45:46,298 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-30 00:45:46,308 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2024-12-30 00:45:46,320 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#291](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/signup_settings.py - omero_signup/views.py - setup.py --conflicts 2024-12-30 00:45:46,328 [ scc.config] DEBUG Found github.token 2024-12-30 00:45:46,328 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-12-30 00:45:46,329 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:45:46,372 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:46,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:46,378 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:45:46,419 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:45:46,426 [ scc.git] DEBUG has no local changes 2024-12-30 00:45:46,427 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:45:46,438 [ scc.git] DEBUG [detached HEAD c022ce4] merge master -Dorg -Ssuccess-only 2024-12-30 00:45:46,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:45:46,438 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:45:46,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-12-30 00:45:47,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2024-12-30 00:45:47,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2024-12-30 00:45:48,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2024-12-30 00:45:48,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:45:49,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-30 00:45:49,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2024-12-30 00:45:50,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2024-12-30 00:45:50,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-12-30 00:45:51,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-12-30 00:45:51,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-12-30 00:45:51,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:45:53,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-12-30 00:45:54,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:45:54,010 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-12-30 00:45:54,011 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:45:54,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-30 00:45:54,011 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:54,011 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:54,017 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:45:54,023 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:45:54,023 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:45:54,030 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:45:54,037 [ scc.git] DEBUG Already up to date. 2024-12-30 00:45:54,037 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-12-30 00:45:54,564 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-12-30 00:45:54,564 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-12-30 00:45:54,570 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:45:54,570 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:54,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:54,576 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-12-30 00:45:54,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:54,592 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-12-30 00:45:54,669 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:45:54,672 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-12-30 00:45:54,672 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-12-30 00:45:54,672 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-12-30 00:45:54,672 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-12-30 00:45:54,673 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-12-30 00:45:54,673 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-12-30 00:45:54,675 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-12-30 00:45:54,675 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-12-30 00:45:54,675 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-12-30 00:45:54,675 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-12-30 00:45:54,675 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-12-30 00:45:54,675 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-12-30 00:45:54,675 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-12-30 00:45:54,675 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-12-30 00:45:54,675 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-12-30 00:45:54,675 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-12-30 00:45:54,675 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-12-30 00:45:54,675 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-12-30 00:45:54,675 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-12-30 00:45:54,675 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-12-30 00:45:54,676 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-12-30 00:45:54,676 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-12-30 00:45:54,676 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-12-30 00:45:54,676 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-12-30 00:45:54,677 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-12-30 00:45:54,677 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-12-30 00:45:54,677 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-12-30 00:45:54,677 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-12-30 00:45:54,677 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-12-30 00:45:54,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:45:54,806 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:45:54,847 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:54,847 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:54,852 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:45:54,895 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:45:54,902 [ scc.git] DEBUG has no local changes 2024-12-30 00:45:54,903 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:45:54,913 [ scc.git] DEBUG [detached HEAD e495698] merge master -Dorg -Ssuccess-only 2024-12-30 00:45:54,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:45:54,913 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:45:55,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-12-30 00:45:55,236 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:45:55,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-30 00:45:55,237 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:55,237 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:55,242 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:45:55,248 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:45:55,248 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:45:55,255 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:45:55,261 [ scc.git] DEBUG Already up to date. 2024-12-30 00:45:55,261 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:45:55,261 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:55,261 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:55,266 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:45:55,308 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:55,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:55,314 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:45:55,355 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:45:55,362 [ scc.git] DEBUG has no local changes 2024-12-30 00:45:55,362 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:45:55,371 [ scc.git] DEBUG [detached HEAD 7c11765] merge master -Dorg -Ssuccess-only 2024-12-30 00:45:55,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:45:55,371 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:45:55,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2024-12-30 00:45:56,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None 2024-12-30 00:45:56,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20/comments HTTP/1.1" 200 None 2024-12-30 00:45:57,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-12-30 00:45:57,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:45:58,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-30 00:45:58,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-12-30 00:45:59,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:45:59,110 [ scc.repo] DEBUG - PR 20 jburel 'Build' 2024-12-30 00:45:59,111 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:45:59,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-30 00:45:59,111 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:59,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:59,118 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:45:59,125 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:45:59,126 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:45:59,133 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:45:59,141 [ scc.git] DEBUG Already up to date. 2024-12-30 00:45:59,142 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head' 2024-12-30 00:45:59,845 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2024-12-30 00:45:59,845 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD 2024-12-30 00:45:59,850 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:45:59,850 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:45:59,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:59,857 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea' 2024-12-30 00:45:59,863 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:45:59,871 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea' 2024-12-30 00:45:59,934 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:45:59,936 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-12-30 00:45:59,937 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-12-30 00:45:59,937 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-12-30 00:45:59,937 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2024-12-30 00:45:59,937 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-12-30 00:46:00,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:00,076 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:46:00,119 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:46:00,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:00,124 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:46:00,164 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:46:00,171 [ scc.git] DEBUG has no local changes 2024-12-30 00:46:00,171 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:46:00,180 [ scc.git] DEBUG [detached HEAD 674fdee] merge master -Dorg -Ssuccess-only 2024-12-30 00:46:00,180 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:00,181 [ scc.git] INFO Overriding base-branch from master to main 2024-12-30 00:46:00,181 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:46:00,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-12-30 00:46:01,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None 2024-12-30 00:46:01,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None 2024-12-30 00:46:02,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None 2024-12-30 00:46:02,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:46:03,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-30 00:46:03,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-12-30 00:46:04,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-12-30 00:46:04,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-12-30 00:46:05,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-12-30 00:46:05,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:46:05,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-12-30 00:46:06,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:46:06,415 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-12-30 00:46:06,416 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:46:06,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-30 00:46:06,416 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:46:06,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:06,422 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-12-30 00:46:06,427 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:46:06,428 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-12-30 00:46:06,433 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-12-30 00:46:06,439 [ scc.git] DEBUG Already up to date. 2024-12-30 00:46:06,439 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-12-30 00:46:06,766 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-12-30 00:46:06,766 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-12-30 00:46:06,771 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:46:06,772 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:46:06,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:06,778 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-30 00:46:06,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:06,791 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-30 00:46:06,884 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-12-30 00:46:06,884 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-12-30 00:46:06,884 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-30 00:46:06,885 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-30 00:46:06,892 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2024-12-30 00:46:06,899 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build 2024-12-30 00:46:07,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:07,036 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-30 00:46:07,043 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2024-12-30 00:46:07,050 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#291](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-12-30 00:46:07,056 [ scc.config] DEBUG Found github.token 2024-12-30 00:46:07,057 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-12-30 00:46:07,057 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:46:07,099 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:46:07,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:07,105 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:46:07,148 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:46:07,155 [ scc.git] DEBUG has no local changes 2024-12-30 00:46:07,155 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:46:07,164 [ scc.git] DEBUG [detached HEAD 9330bcb] merge master -Dorg -Ssuccess-only 2024-12-30 00:46:07,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:07,164 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:46:07,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-12-30 00:46:07,449 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:46:07,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-30 00:46:07,449 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:46:07,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:07,456 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:46:07,461 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:46:07,461 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:46:07,466 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:46:07,472 [ scc.git] DEBUG Already up to date. 2024-12-30 00:46:07,472 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:46:07,472 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:46:07,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:07,477 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:46:07,516 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:46:07,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:07,522 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:46:07,564 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:46:07,571 [ scc.git] DEBUG has no local changes 2024-12-30 00:46:07,571 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:46:07,581 [ scc.git] DEBUG [detached HEAD a92acbb] merge master -Dorg -Ssuccess-only 2024-12-30 00:46:07,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:07,581 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:46:07,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-12-30 00:46:07,885 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:46:07,885 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-30 00:46:07,885 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:46:07,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:07,891 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:46:07,896 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:46:07,897 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:46:07,902 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:46:07,909 [ scc.git] DEBUG Already up to date. 2024-12-30 00:46:07,909 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:46:07,909 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:46:07,910 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:07,917 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:46:07,964 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:46:07,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:07,970 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:46:08,012 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:46:08,019 [ scc.git] DEBUG has no local changes 2024-12-30 00:46:08,019 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:46:08,028 [ scc.git] DEBUG [detached HEAD 8977f71] merge master -Dorg -Ssuccess-only 2024-12-30 00:46:08,028 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:08,029 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:46:08,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-12-30 00:46:08,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-12-30 00:46:09,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-12-30 00:46:09,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-12-30 00:46:10,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:46:10,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-12-30 00:46:11,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:46:11,265 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-12-30 00:46:11,265 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:46:11,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-30 00:46:11,265 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:46:11,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:11,271 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-30 00:46:11,277 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:46:11,277 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-30 00:46:11,282 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-30 00:46:11,288 [ scc.git] DEBUG Already up to date. 2024-12-30 00:46:11,289 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-12-30 00:46:11,889 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-12-30 00:46:11,889 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-12-30 00:46:11,896 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:46:11,896 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:46:11,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:11,901 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-30 00:46:11,907 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:11,912 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-30 00:46:12,318 [ scc.git] DEBUG Auto-merging Dockerfile 2024-12-30 00:46:12,318 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-12-30 00:46:12,319 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-30 00:46:12,319 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-30 00:46:12,325 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-12-30 00:46:12,332 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-12-30 00:46:12,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:12,473 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-30 00:46:12,479 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-12-30 00:46:12,484 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#291](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-12-30 00:46:12,490 [ scc.config] DEBUG Found github.token 2024-12-30 00:46:12,491 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-12-30 00:46:12,491 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:46:12,534 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:46:12,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:12,540 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:46:12,583 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:46:12,595 [ scc.git] DEBUG has no local changes 2024-12-30 00:46:12,596 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:46:12,812 [ scc.git] DEBUG [detached HEAD 7c14b48] merge master -Dorg -Ssuccess-only 2024-12-30 00:46:12,813 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:12,813 [ scc.git] INFO Overriding base-branch from master to develop 2024-12-30 00:46:12,813 [ scc.repo] DEBUG ## PRs found: 2024-12-30 00:46:13,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-12-30 00:46:13,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-12-30 00:46:14,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-12-30 00:46:14,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-30 00:46:15,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:46:15,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-30 00:46:15,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-30 00:46:16,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:46:16,352 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-30 00:46:16,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-12-30 00:46:17,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-12-30 00:46:17,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-30 00:46:18,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-30 00:46:18,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-30 00:46:19,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-12-30 00:46:19,209 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-30 00:46:19,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-12-30 00:46:20,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-12-30 00:46:20,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-12-30 00:46:21,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-12-30 00:46:21,231 [ scc.repo] DEBUG ## Branches found: 2024-12-30 00:46:21,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-30 00:46:21,231 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:46:21,231 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:21,237 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-12-30 00:46:21,244 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-30 00:46:21,244 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-12-30 00:46:21,251 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-12-30 00:46:21,258 [ scc.git] DEBUG Already up to date. 2024-12-30 00:46:21,259 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-12-30 00:46:22,116 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-12-30 00:46:22,117 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-12-30 00:46:22,122 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-12-30 00:46:22,427 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-12-30 00:46:22,428 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-12-30 00:46:22,433 [ scc.git] DEBUG ## Unique users: [] 2024-12-30 00:46:22,433 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:46:22,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:22,441 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-30 00:46:22,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:22,457 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-30 00:46:22,479 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2024-12-30 00:46:22,480 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-30 00:46:22,480 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-30 00:46:22,488 [ scc.git] DEBUG Calling 'git reset --hard 4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2024-12-30 00:46:22,494 [ scc.git] DEBUG HEAD is now at 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2024-12-30 00:46:22,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:22,637 [ scc.git] DEBUG Calling 'git merge-base 4b4c755af4ccf8a5e709548d1f8415fab48a4867 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-30 00:46:22,649 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2024-12-30 00:46:22,658 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#291](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-12-30 00:46:22,664 [ scc.config] DEBUG Found github.token 2024-12-30 00:46:22,664 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-12-30 00:46:22,665 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-30 00:46:22,673 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:22,679 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-30 00:46:22,701 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-30 00:46:22,704 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-12-30 00:46:22,704 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-12-30 00:46:23,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:23,022 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-30 00:46:23,061 [ scc.git] DEBUG Get sha1 of %s 2024-12-30 00:46:23,061 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-30 00:46:23,066 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:46:23,106 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:46:23,113 [ scc.git] DEBUG has no local changes 2024-12-30 00:46:23,113 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:46:23,123 [ scc.git] DEBUG [detached HEAD e6d910b] merge master -Dorg -Ssuccess-only 2024-12-30 00:46:23,124 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:23,124 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-30 00:46:23,201 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-12-30 00:46:23,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:23,425 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-12-30 00:46:23,430 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-12-30 00:46:23,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:23,832 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-12-30 00:46:23,838 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-12-30 00:46:24,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:24,222 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-12-30 00:46:24,226 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-12-30 00:46:24,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:24,618 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-12-30 00:46:25,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:25,014 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-12-30 00:46:25,020 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-12-30 00:46:25,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:25,400 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-12-30 00:46:25,405 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-12-30 00:46:25,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:25,818 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-12-30 00:46:25,826 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-12-30 00:46:26,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:26,211 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-12-30 00:46:26,215 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-12-30 00:46:26,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:26,622 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-12-30 00:46:26,628 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-12-30 00:46:26,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:27,008 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-12-30 00:46:27,013 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-12-30 00:46:27,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:27,390 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-12-30 00:46:27,395 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-12-30 00:46:27,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:27,772 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-12-30 00:46:27,777 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-12-30 00:46:28,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:28,219 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-12-30 00:46:28,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:28,619 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-12-30 00:46:28,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:29,005 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-12-30 00:46:29,011 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-12-30 00:46:29,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:29,395 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-12-30 00:46:29,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:29,834 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-12-30 00:46:30,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:30,215 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-12-30 00:46:30,219 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-12-30 00:46:30,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:30,614 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-12-30 00:46:30,620 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-12-30 00:46:30,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:31,007 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-12-30 00:46:31,012 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-12-30 00:46:31,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:31,397 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-12-30 00:46:31,401 [ scc.config] DEBUG Found submodule.scripts.url 2024-12-30 00:46:31,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-30 00:46:31,896 [ scc.config] DEBUG Found submodule.scripts.branch 2024-12-30 00:46:31,896 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-30 00:46:31,979 [ scc.git] DEBUG has local changes 2024-12-30 00:46:31,979 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Repository: ome/omero-prometheus-tools Already up to date. Repository: ome/omero-rois Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#291 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/291/)' 2024-12-30 00:46:31,996 [ scc.git] DEBUG [detached HEAD 19019da] merge master -Dorg -Ssuccess-only 2024-12-30 00:46:31,996 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-12-30 00:46:31,996 [ scc.merge] INFO Repository: ome/omero-plugins 2024-12-30 00:46:31,997 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:31,997 [ scc.merge] INFO 2024-12-30 00:46:31,997 [ scc.merge] INFO Merged PRs: 2024-12-30 00:46:31,997 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2024-12-30 00:46:31,997 [ scc.merge] INFO 2024-12-30 00:46:31,997 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-12-30 00:46:31,997 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:31,997 [ scc.merge] INFO 2024-12-30 00:46:31,997 [ scc.merge] INFO 2024-12-30 00:46:31,997 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-12-30 00:46:31,997 [ scc.merge] INFO Excluded PRs: 2024-12-30 00:46:31,997 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-12-30 00:46:31,997 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:31,997 [ scc.merge] INFO 2024-12-30 00:46:31,997 [ scc.merge] INFO 2024-12-30 00:46:31,997 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-12-30 00:46:31,997 [ scc.merge] INFO Excluded PRs: 2024-12-30 00:46:31,997 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-12-30 00:46:31,997 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:31,997 [ scc.merge] INFO 2024-12-30 00:46:31,997 [ scc.merge] INFO Merged PRs: 2024-12-30 00:46:31,997 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-12-30 00:46:31,997 [ scc.merge] INFO 2024-12-30 00:46:31,997 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-12-30 00:46:31,997 [ scc.merge] INFO Excluded PRs: 2024-12-30 00:46:31,997 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-12-30 00:46:31,997 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:31,997 [ scc.merge] INFO 2024-12-30 00:46:31,997 [ scc.merge] INFO Merged PRs: 2024-12-30 00:46:31,997 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-12-30 00:46:31,997 [ scc.merge] INFO 2024-12-30 00:46:31,997 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-30 00:46:31,997 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-12-30 00:46:31,997 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-12-30 00:46:31,998 [ scc.merge] INFO 2024-12-30 00:46:31,998 [ scc.merge] INFO Repository: ome/omero-figure 2024-12-30 00:46:31,998 [ scc.merge] INFO Excluded PRs: 2024-12-30 00:46:31,998 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) 2024-12-30 00:46:31,998 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier) 2024-12-30 00:46:31,998 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-12-30 00:46:31,998 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:31,998 [ scc.merge] INFO 2024-12-30 00:46:31,998 [ scc.merge] INFO 2024-12-30 00:46:31,998 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-12-30 00:46:31,998 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:31,998 [ scc.merge] INFO 2024-12-30 00:46:31,998 [ scc.merge] INFO Merged PRs: 2024-12-30 00:46:31,998 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-12-30 00:46:31,998 [ scc.merge] INFO 2024-12-30 00:46:31,998 [ scc.merge] INFO Repository: ome/omero-gallery 2024-12-30 00:46:31,998 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:31,998 [ scc.merge] INFO 2024-12-30 00:46:31,998 [ scc.merge] INFO Merged PRs: 2024-12-30 00:46:31,998 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-12-30 00:46:31,998 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-12-30 00:46:31,998 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-12-30 00:46:31,998 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-12-30 00:46:31,998 [ scc.merge] INFO 2024-12-30 00:46:31,998 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-30 00:46:31,998 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-12-30 00:46:31,998 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-12-30 00:46:31,998 [ scc.merge] INFO 2024-12-30 00:46:31,998 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-12-30 00:46:31,998 [ scc.merge] INFO Excluded PRs: 2024-12-30 00:46:31,998 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2024-12-30 00:46:31,998 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-12-30 00:46:31,998 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-12-30 00:46:31,998 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:31,998 [ scc.merge] INFO 2024-12-30 00:46:31,998 [ scc.merge] INFO Merged PRs: 2024-12-30 00:46:31,998 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-12-30 00:46:31,999 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-12-30 00:46:31,999 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-12-30 00:46:31,999 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2024-12-30 00:46:31,999 [ scc.merge] INFO 2024-12-30 00:46:31,999 [ scc.merge] INFO Repository: ome/omero-mapr 2024-12-30 00:46:31,999 [ scc.merge] INFO Excluded PRs: 2024-12-30 00:46:31,999 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-12-30 00:46:31,999 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:31,999 [ scc.merge] INFO 2024-12-30 00:46:31,999 [ scc.merge] INFO Merged PRs: 2024-12-30 00:46:31,999 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-12-30 00:46:31,999 [ scc.merge] INFO 2024-12-30 00:46:31,999 [ scc.merge] INFO Repository: ome/omero-metadata 2024-12-30 00:46:31,999 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:31,999 [ scc.merge] INFO 2024-12-30 00:46:31,999 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-30 00:46:31,999 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-12-30 00:46:31,999 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-12-30 00:46:31,999 [ scc.merge] INFO 2024-12-30 00:46:31,999 [ scc.merge] INFO Repository: ome/omero-parade 2024-12-30 00:46:31,999 [ scc.merge] INFO Excluded PRs: 2024-12-30 00:46:31,999 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2024-12-30 00:46:31,999 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-12-30 00:46:31,999 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-12-30 00:46:31,999 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-12-30 00:46:31,999 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:31,999 [ scc.merge] INFO 2024-12-30 00:46:31,999 [ scc.merge] INFO 2024-12-30 00:46:31,999 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-12-30 00:46:31,999 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:31,999 [ scc.merge] INFO 2024-12-30 00:46:31,999 [ scc.merge] INFO 2024-12-30 00:46:31,999 [ scc.merge] INFO Repository: ome/omero-rois 2024-12-30 00:46:31,999 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:31,999 [ scc.merge] INFO 2024-12-30 00:46:31,999 [ scc.merge] INFO Merged PRs: 2024-12-30 00:46:31,999 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-12-30 00:46:32,000 [ scc.merge] INFO 2024-12-30 00:46:32,000 [ scc.merge] INFO Repository: ome/omero-signup 2024-12-30 00:46:32,000 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:32,000 [ scc.merge] INFO 2024-12-30 00:46:32,000 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-30 00:46:32,000 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-12-30 00:46:32,000 [ scc.merge] INFO 2024-12-30 00:46:32,000 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-12-30 00:46:32,000 [ scc.merge] INFO Excluded PRs: 2024-12-30 00:46:32,000 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2024-12-30 00:46:32,000 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2024-12-30 00:46:32,000 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2024-12-30 00:46:32,000 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:32,000 [ scc.merge] INFO 2024-12-30 00:46:32,000 [ scc.merge] INFO Merged PRs: 2024-12-30 00:46:32,000 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-12-30 00:46:32,000 [ scc.merge] INFO 2024-12-30 00:46:32,000 [ scc.merge] INFO Repository: ome/omero-upload 2024-12-30 00:46:32,000 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:32,000 [ scc.merge] INFO 2024-12-30 00:46:32,000 [ scc.merge] INFO 2024-12-30 00:46:32,000 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-12-30 00:46:32,000 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:32,000 [ scc.merge] INFO 2024-12-30 00:46:32,000 [ scc.merge] INFO Merged PRs: 2024-12-30 00:46:32,000 [ scc.merge] INFO - PR 20 jburel 'Build' 2024-12-30 00:46:32,000 [ scc.merge] INFO 2024-12-30 00:46:32,000 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-12-30 00:46:32,000 [ scc.merge] INFO Excluded PRs: 2024-12-30 00:46:32,000 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure) 2024-12-30 00:46:32,000 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-12-30 00:46:32,000 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:32,000 [ scc.merge] INFO 2024-12-30 00:46:32,000 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-30 00:46:32,000 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-12-30 00:46:32,000 [ scc.merge] INFO 2024-12-30 00:46:32,001 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-12-30 00:46:32,001 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:32,001 [ scc.merge] INFO 2024-12-30 00:46:32,001 [ scc.merge] INFO 2024-12-30 00:46:32,001 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-12-30 00:46:32,001 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:32,001 [ scc.merge] INFO 2024-12-30 00:46:32,001 [ scc.merge] INFO 2024-12-30 00:46:32,001 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-12-30 00:46:32,001 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:32,001 [ scc.merge] INFO 2024-12-30 00:46:32,001 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-30 00:46:32,001 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-12-30 00:46:32,001 [ scc.merge] INFO 2024-12-30 00:46:32,001 [ scc.merge] INFO Repository: ome/scripts 2024-12-30 00:46:32,001 [ scc.merge] INFO Excluded PRs: 2024-12-30 00:46:32,001 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-12-30 00:46:32,001 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-12-30 00:46:32,001 [ scc.merge] INFO Already up to date. 2024-12-30 00:46:32,001 [ scc.merge] INFO 2024-12-30 00:46:32,001 [ scc.merge] INFO Merged PRs: 2024-12-30 00:46:32,001 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-30 00:46:32,001 [ scc.merge] INFO 2024-12-30 00:46:32,001 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-30 00:46:32,001 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-30 00:46:32,001 [ scc.merge] INFO 2024-12-30 00:46:32,001 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-30 00:46:32,001 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-30 00:46:32,008 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-30 00:46:32,014 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-30 00:46:32,021 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-30 00:46:32,027 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-30 00:46:32,033 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-30 00:46:32,039 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-30 00:46:32,045 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-30 00:46:32,052 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-30 00:46:32,058 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-30 00:46:32,064 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,071 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-30 00:46:32,071 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-30 00:46:32,079 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-30 00:46:32,086 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-30 00:46:32,092 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-30 00:46:32,098 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-30 00:46:32,104 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-30 00:46:32,111 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,117 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,117 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-30 00:46:32,117 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,123 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,123 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-30 00:46:32,123 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-30 00:46:32,130 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-30 00:46:32,135 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-30 00:46:32,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-30 00:46:32,140 [ scc.git] DEBUG Calling 'git remote' 2024-12-30 00:46:32,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: 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or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 931998b] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from fb316a7e nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from b4102d4 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 707a057] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-30 00:47:19,111 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-30 00:47:28,021 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-30 00:47:30,421 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-30 00:47:34,823 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-30 00:48:14,897 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS