Started by upstream project "Trigger" build number 328 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 288 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.7-py3-none-any.whl.metadata (21 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.15-py2.py3-none-any.whl.metadata (5.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.12.14-py3-none-any.whl.metadata (2.3 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.7-py3-none-any.whl (116 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.15-py2.py3-none-any.whl (9.9 kB) Using cached certifi-2024.12.14-py3-none-any.whl (164 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (146 kB) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.15 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.12.14 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.0 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.7 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-01-02 00:56:11,770 [ scc.config] DEBUG Found github.token 2025-01-02 00:56:11,773 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-01-02 00:56:11,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:56:12,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:56:12,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-01-02 00:56:12,752 [ scc.gh] DEBUG 4869 remaining from 5000 (Reset at 01:01 2025-01-02 00:56:12,753 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:56:12,757 [ scc.git] DEBUG Check current status 2025-01-02 00:56:12,758 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:12,761 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-01-02 00:56:12,762 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:12,810 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-01-02 00:56:12,878 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-01-02 00:56:13,241 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-01-02 00:56:13,445 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-01-02 00:56:13,449 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-01-02 00:56:13,494 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-01-02 00:56:13,861 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-01-02 00:56:13,865 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-01-02 00:56:13,868 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-01-02 00:56:13,872 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-01-02 00:56:13,970 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-01-02 00:56:14,110 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-01-02 00:56:14,290 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-01-02 00:56:14,294 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-01-02 00:56:14,590 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-01-02 00:56:14,593 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-01-02 00:56:14,596 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-01-02 00:56:14,599 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-01-02 00:56:14,663 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-01-02 00:56:14,666 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-01-02 00:56:14,670 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-01-02 00:56:14,673 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-01-02 00:56:14,679 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:56:14,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-01-02 00:56:15,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:56:15,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:56:16,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:56:16,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:56:16,559 [ scc.git] DEBUG Resetting... 2025-01-02 00:56:16,559 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-01-02 00:56:16,569 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-01-02 00:56:16,569 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-01-02 00:56:16,677 [ scc.git] DEBUG Check current status 2025-01-02 00:56:16,677 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:16,681 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-01-02 00:56:16,681 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:16,732 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-01-02 00:56:16,734 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-01-02 00:56:16,737 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-01-02 00:56:16,740 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-01-02 00:56:16,744 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-01-02 00:56:16,746 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-01-02 00:56:16,749 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-01-02 00:56:16,753 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-01-02 00:56:16,756 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-01-02 00:56:16,759 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-01-02 00:56:16,763 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-01-02 00:56:16,766 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-01-02 00:56:16,769 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-01-02 00:56:16,772 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-01-02 00:56:16,778 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-01-02 00:56:16,781 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-01-02 00:56:16,784 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-01-02 00:56:16,787 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-01-02 00:56:16,790 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-01-02 00:56:16,795 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-01-02 00:56:16,798 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-01-02 00:56:16,802 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-01-02 00:56:16,803 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-01-02 00:56:16,804 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-01-02 00:56:16,804 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-01-02 00:56:16,804 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-01-02 00:56:16,804 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-01-02 00:56:16,804 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:56:17,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-01-02 00:56:17,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-01-02 00:56:17,494 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-02 00:56:17,494 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-01-02 00:56:17,494 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:56:17,494 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:56:17,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:56:17,498 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:56:17,502 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:56:17,502 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:56:17,507 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:56:17,512 [ scc.git] DEBUG Already up to date. 2025-01-02 00:56:17,512 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-01-02 00:56:17,843 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-01-02 00:56:17,843 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-01-02 00:56:17,850 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:56:17,851 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:56:17,851 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:56:17,855 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-01-02 00:56:17,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:56:17,867 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-01-02 00:56:17,885 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:56:17,888 [ scc.git] DEBUG scripts | 2 +- 2025-01-02 00:56:17,888 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-01-02 00:56:18,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:56:18,021 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:56:18,091 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-01-02 00:56:18,091 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:56:18,092 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:56:18,096 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:56:19,357 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8bd3e58be0> has no local changes 2025-01-02 00:56:19,357 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:56:19,436 [ scc.git] DEBUG [detached HEAD 0612bd8] merge master -Dorg -Snone 2025-01-02 00:56:19,437 [ scc.merge] INFO Repository: ome/omero-plugins 2025-01-02 00:56:19,437 [ scc.merge] INFO Already up to date. 2025-01-02 00:56:19,437 [ scc.merge] INFO 2025-01-02 00:56:19,437 [ scc.merge] INFO Merged PRs: 2025-01-02 00:56:19,437 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-01-02 00:56:19,437 [ scc.merge] INFO 2025-01-02 00:56:19,437 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-01-02 00:56:19,437 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2025-01-02 00:56:27,300 [ scc.config] DEBUG Found github.token 2025-01-02 00:56:27,303 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-01-02 00:56:27,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:56:27,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:56:28,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-01-02 00:56:28,295 [ scc.gh] DEBUG 4825 remaining from 5000 (Reset at 01:01 2025-01-02 00:56:28,296 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:56:28,300 [ scc.git] DEBUG Check current status 2025-01-02 00:56:28,300 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:28,303 [ scc.git] DEBUG 0612bd8 merge master -Dorg -Snone 2025-01-02 00:56:28,303 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:28,351 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-01-02 00:56:28,354 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-01-02 00:56:28,357 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-01-02 00:56:28,362 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-01-02 00:56:28,366 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-01-02 00:56:28,369 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-01-02 00:56:28,372 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-01-02 00:56:28,375 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-01-02 00:56:28,379 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-01-02 00:56:28,382 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-01-02 00:56:28,386 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-01-02 00:56:28,389 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-01-02 00:56:28,392 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-01-02 00:56:28,395 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-01-02 00:56:28,399 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-01-02 00:56:28,402 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-01-02 00:56:28,404 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-01-02 00:56:28,407 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-01-02 00:56:28,410 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-01-02 00:56:28,412 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-01-02 00:56:28,417 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-01-02 00:56:28,423 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-01-02 00:56:28,427 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:56:28,427 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-01-02 00:56:28,429 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2025-01-02 00:56:28,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-01-02 00:56:29,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:56:29,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:56:30,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:56:30,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:56:30,469 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:56:30,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-01-02 00:56:30,546 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:56:30,550 [ scc.git] DEBUG Check current status 2025-01-02 00:56:30,550 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:30,554 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2025-01-02 00:56:30,554 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:30,597 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:56:30,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2025-01-02 00:56:31,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:56:31,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:56:32,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:56:32,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:56:32,660 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:56:32,701 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:56:32,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-01-02 00:56:32,702 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:56:32,706 [ scc.git] DEBUG Check current status 2025-01-02 00:56:32,707 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:32,710 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2025-01-02 00:56:32,711 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:32,753 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:56:33,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2025-01-02 00:56:33,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:56:33,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:56:34,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:56:34,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:56:34,823 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:56:34,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:56:34,869 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-01-02 00:56:34,869 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:56:34,873 [ scc.git] DEBUG Check current status 2025-01-02 00:56:34,873 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:34,876 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2025-01-02 00:56:34,877 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:34,929 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:56:35,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2025-01-02 00:56:35,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:56:36,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:56:36,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:56:36,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:56:36,937 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:56:36,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:56:36,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-01-02 00:56:36,981 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:56:36,986 [ scc.git] DEBUG Check current status 2025-01-02 00:56:36,986 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:36,991 [ scc.git] DEBUG 11d3587 Merge pull request #165 from jburel/build 2025-01-02 00:56:36,992 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:37,037 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:56:37,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2025-01-02 00:56:37,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:56:38,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:56:38,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:56:39,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:56:39,070 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:56:39,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:56:39,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-01-02 00:56:39,118 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:56:39,123 [ scc.git] DEBUG Check current status 2025-01-02 00:56:39,123 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:39,140 [ scc.git] DEBUG fb316a7e Bump version: 7.2.0 → 7.2.1.dev0 2025-01-02 00:56:39,140 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:39,190 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:56:39,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2025-01-02 00:56:40,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:56:40,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:56:40,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:56:41,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:56:41,233 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:56:41,278 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:56:41,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-01-02 00:56:41,279 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:56:41,284 [ scc.git] DEBUG Check current status 2025-01-02 00:56:41,284 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:41,288 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2025-01-02 00:56:41,289 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:41,342 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:56:41,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2025-01-02 00:56:42,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:56:42,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:56:43,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:56:43,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:56:43,414 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:56:43,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:56:43,460 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-01-02 00:56:43,460 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:56:43,465 [ scc.git] DEBUG Check current status 2025-01-02 00:56:43,465 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:43,471 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2025-01-02 00:56:43,471 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:43,520 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:56:43,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2025-01-02 00:56:44,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:56:44,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:56:45,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:56:45,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:56:45,578 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:56:45,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:56:45,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-01-02 00:56:45,627 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:56:45,632 [ scc.git] DEBUG Check current status 2025-01-02 00:56:45,632 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:45,637 [ scc.git] DEBUG b4102d4 add dev 2025-01-02 00:56:45,637 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:45,689 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:56:46,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2025-01-02 00:56:46,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:56:46,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:56:47,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:56:47,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:56:47,733 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:56:47,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:56:47,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-01-02 00:56:47,783 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:56:47,788 [ scc.git] DEBUG Check current status 2025-01-02 00:56:47,788 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:47,794 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2025-01-02 00:56:47,794 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:47,845 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:56:48,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2025-01-02 00:56:48,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:56:49,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:56:49,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:56:49,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:56:49,921 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:56:49,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:56:49,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-01-02 00:56:49,967 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:56:49,971 [ scc.git] DEBUG Check current status 2025-01-02 00:56:49,972 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:49,976 [ scc.git] DEBUG 3cd120c Merge pull request #89 from jburel/build 2025-01-02 00:56:49,976 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:50,024 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:56:50,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2025-01-02 00:56:50,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:56:51,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:56:51,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:56:52,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:56:52,056 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:56:52,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:56:52,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-01-02 00:56:52,100 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:56:52,104 [ scc.git] DEBUG Check current status 2025-01-02 00:56:52,104 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:52,109 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2025-01-02 00:56:52,109 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:52,160 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:56:52,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2025-01-02 00:56:52,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:56:53,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:56:53,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:56:54,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:56:54,184 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:56:54,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:56:54,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-01-02 00:56:54,231 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:56:54,236 [ scc.git] DEBUG Check current status 2025-01-02 00:56:54,236 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:54,242 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2025-01-02 00:56:54,242 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:54,291 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:56:54,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2025-01-02 00:56:55,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:56:55,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:56:55,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:56:56,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:56:56,353 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:56:56,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:56:56,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-01-02 00:56:56,400 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:56:56,406 [ scc.git] DEBUG Check current status 2025-01-02 00:56:56,406 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:56,412 [ scc.git] DEBUG bdfeb5e bump sphinx version 2025-01-02 00:56:56,412 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:56,461 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:56:56,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2025-01-02 00:56:57,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:56:57,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:56:58,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:56:58,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:56:58,579 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:56:58,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:56:58,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-01-02 00:56:58,624 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:56:58,629 [ scc.git] DEBUG Check current status 2025-01-02 00:56:58,630 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:56:58,635 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2025-01-02 00:56:58,635 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:56:58,683 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:56:59,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2025-01-02 00:56:59,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:56:59,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:57:00,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:57:00,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:57:00,802 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:57:00,850 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:57:00,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-01-02 00:57:00,851 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:57:00,857 [ scc.git] DEBUG Check current status 2025-01-02 00:57:00,857 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:57:00,862 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2025-01-02 00:57:00,862 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:57:00,907 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:57:01,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-01-02 00:57:01,220 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-01-02 00:57:01,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2025-01-02 00:57:01,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:57:02,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:57:02,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:57:03,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:57:03,200 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:57:03,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:57:03,247 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-01-02 00:57:03,247 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:57:03,253 [ scc.git] DEBUG Check current status 2025-01-02 00:57:03,253 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:57:03,259 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2025-01-02 00:57:03,259 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:57:03,314 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:57:03,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2025-01-02 00:57:04,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:57:04,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:57:04,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:57:05,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:57:05,357 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:57:05,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:57:05,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-01-02 00:57:05,406 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:57:05,412 [ scc.git] DEBUG Check current status 2025-01-02 00:57:05,413 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:57:05,418 [ scc.git] DEBUG deab817 update setup-python to v4 2025-01-02 00:57:05,418 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:57:05,467 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:57:05,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2025-01-02 00:57:06,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:57:06,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:57:07,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:57:07,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:57:07,563 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:57:07,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:57:07,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-01-02 00:57:07,613 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:57:07,620 [ scc.git] DEBUG Check current status 2025-01-02 00:57:07,620 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:57:07,626 [ scc.git] DEBUG 8f3c313 Merge pull request #17 from jburel/build 2025-01-02 00:57:07,627 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:57:07,679 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:57:07,680 [ scc.git] DEBUG Repository configuration: base-branch: main 2025-01-02 00:57:08,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2025-01-02 00:57:08,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:57:08,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:57:09,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:57:09,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:57:09,744 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:57:09,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:57:09,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-01-02 00:57:09,790 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:57:09,797 [ scc.git] DEBUG Check current status 2025-01-02 00:57:09,797 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:57:09,803 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:57:09,803 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2025-01-02 00:57:09,847 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:57:10,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-01-02 00:57:10,177 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-01-02 00:57:10,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2025-01-02 00:57:10,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:57:11,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:57:11,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:57:12,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:57:12,164 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:57:12,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:57:12,206 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-01-02 00:57:12,206 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:57:12,211 [ scc.git] DEBUG Check current status 2025-01-02 00:57:12,212 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:57:12,217 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2025-01-02 00:57:12,217 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:57:12,263 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:57:12,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-01-02 00:57:12,572 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-01-02 00:57:12,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2025-01-02 00:57:13,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:57:13,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:57:14,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:57:14,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:57:14,474 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:57:14,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:57:14,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-01-02 00:57:14,518 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:57:14,524 [ scc.git] DEBUG Check current status 2025-01-02 00:57:14,525 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:57:14,530 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-01-02 00:57:14,530 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:57:14,581 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:57:14,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2025-01-02 00:57:15,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:57:15,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:57:16,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:57:16,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:57:16,685 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:57:16,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:57:16,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-01-02 00:57:16,730 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-01-02 00:57:16,735 [ scc.git] DEBUG Check current status 2025-01-02 00:57:16,735 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:57:16,783 [ scc.git] DEBUG 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2025-01-02 00:57:16,783 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:57:16,829 [ scc.config] DEBUG Found remote.origin.url 2025-01-02 00:57:16,830 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-01-02 00:57:17,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-01-02 00:57:17,093 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-01-02 00:57:17,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2025-01-02 00:57:17,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-01-02 00:57:18,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-01-02 00:57:18,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-01-02 00:57:19,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-01-02 00:57:19,031 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:57:19,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:57:19,078 [ scc.git] DEBUG Resetting... 2025-01-02 00:57:19,078 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-01-02 00:57:19,090 [ scc.git] DEBUG HEAD is now at 0612bd8 merge master -Dorg -Snone 2025-01-02 00:57:19,090 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-01-02 00:57:19,206 [ scc.git] DEBUG Check current status 2025-01-02 00:57:19,206 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-01-02 00:57:19,212 [ scc.git] DEBUG 0612bd8 merge master -Dorg -Snone 2025-01-02 00:57:19,212 [ scc.git] DEBUG Calling 'git submodule status' 2025-01-02 00:57:19,267 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-01-02 00:57:19,270 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-01-02 00:57:19,274 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-01-02 00:57:19,277 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-01-02 00:57:19,281 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-01-02 00:57:19,286 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-01-02 00:57:19,289 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-01-02 00:57:19,293 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-01-02 00:57:19,297 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-01-02 00:57:19,300 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-01-02 00:57:19,304 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-01-02 00:57:19,307 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-01-02 00:57:19,313 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-01-02 00:57:19,317 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-01-02 00:57:19,322 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-01-02 00:57:19,325 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-01-02 00:57:19,328 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-01-02 00:57:19,331 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-01-02 00:57:19,334 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-01-02 00:57:19,338 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-01-02 00:57:19,343 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-01-02 00:57:19,347 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-01-02 00:57:19,349 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-01-02 00:57:19,349 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-01-02 00:57:19,349 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-01-02 00:57:19,349 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-01-02 00:57:19,349 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-01-02 00:57:19,349 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-01-02 00:57:19,349 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:57:19,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-01-02 00:57:20,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-01-02 00:57:20,103 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-02 00:57:20,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-01-02 00:57:21,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:57:21,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-01-02 00:57:22,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:57:22,041 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-01-02 00:57:22,042 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:57:22,042 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:22,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:22,048 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:57:22,053 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:57:22,054 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:57:22,059 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:57:22,065 [ scc.git] DEBUG Already up to date. 2025-01-02 00:57:22,066 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-01-02 00:57:22,416 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-01-02 00:57:22,416 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-01-02 00:57:22,423 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:57:22,423 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:22,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:22,429 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-01-02 00:57:22,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:22,441 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-01-02 00:57:22,447 [ scc.git] DEBUG Already up to date. 2025-01-02 00:57:22,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:57:22,594 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:57:22,656 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:22,656 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:22,662 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:57:23,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2025-01-02 00:57:23,008 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:57:23,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-01-02 00:57:23,009 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:23,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:23,014 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:57:23,020 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:57:23,020 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:57:23,026 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:57:23,032 [ scc.git] DEBUG Already up to date. 2025-01-02 00:57:23,032 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:57:23,032 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:23,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:23,038 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:57:23,081 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:23,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:23,086 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:57:23,130 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:57:23,137 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561df264c0> has no local changes 2025-01-02 00:57:23,137 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:57:23,147 [ scc.git] DEBUG [detached HEAD 4f99663] merge master -Dorg -Ssuccess-only 2025-01-02 00:57:23,148 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:57:23,148 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:57:23,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2025-01-02 00:57:24,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2025-01-02 00:57:24,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2025-01-02 00:57:24,532 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:57:24,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-01-02 00:57:24,532 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:24,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:24,539 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:57:24,545 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:57:24,545 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:57:24,552 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:57:24,558 [ scc.git] DEBUG Already up to date. 2025-01-02 00:57:24,558 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:57:24,558 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:24,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:24,566 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:57:24,616 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:24,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:24,622 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:57:24,669 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:57:24,677 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561df26520> has no local changes 2025-01-02 00:57:24,677 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:57:24,687 [ scc.git] DEBUG [detached HEAD 1ad5af8] merge master -Dorg -Ssuccess-only 2025-01-02 00:57:24,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:57:24,688 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:57:25,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2025-01-02 00:57:25,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2025-01-02 00:57:26,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2025-01-02 00:57:26,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-01-02 00:57:27,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:57:27,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-02 00:57:28,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-01-02 00:57:28,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:57:28,460 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2025-01-02 00:57:28,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2025-01-02 00:57:29,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2025-01-02 00:57:29,365 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:57:29,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-01-02 00:57:29,365 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:29,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:29,372 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:57:29,378 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:57:29,378 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:57:29,384 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:57:29,391 [ scc.git] DEBUG Already up to date. 2025-01-02 00:57:29,391 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2025-01-02 00:57:30,119 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-01-02 00:57:30,120 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2025-01-02 00:57:30,125 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:57:30,125 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:30,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:30,131 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2025-01-02 00:57:30,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:30,145 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2025-01-02 00:57:30,210 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:57:30,213 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2025-01-02 00:57:30,214 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2025-01-02 00:57:30,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:57:30,351 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:57:30,396 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:30,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:30,403 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:57:30,448 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:57:30,456 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561ebc3040> has no local changes 2025-01-02 00:57:30,457 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:57:30,467 [ scc.git] DEBUG [detached HEAD be3828e] merge master -Dorg -Ssuccess-only 2025-01-02 00:57:30,467 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:57:30,468 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:57:30,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2025-01-02 00:57:31,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2025-01-02 00:57:31,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2025-01-02 00:57:32,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2025-01-02 00:57:32,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2025-01-02 00:57:33,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:57:33,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-02 00:57:34,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2025-01-02 00:57:34,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2025-01-02 00:57:35,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2025-01-02 00:57:35,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2025-01-02 00:57:35,485 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2025-01-02 00:57:35,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2025-01-02 00:57:36,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2025-01-02 00:57:36,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2025-01-02 00:57:37,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2025-01-02 00:57:37,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:57:38,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2025-01-02 00:57:38,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:57:38,995 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2025-01-02 00:57:39,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2025-01-02 00:57:40,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2025-01-02 00:57:40,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2025-01-02 00:57:41,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:57:41,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2025-01-02 00:57:42,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:57:42,049 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2025-01-02 00:57:42,049 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:57:42,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-01-02 00:57:42,050 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:42,050 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:42,057 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:57:42,063 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:57:42,063 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:57:42,071 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:57:42,078 [ scc.git] DEBUG Already up to date. 2025-01-02 00:57:42,079 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2025-01-02 00:57:42,639 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-01-02 00:57:42,639 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2025-01-02 00:57:42,644 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2025-01-02 00:57:43,097 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-01-02 00:57:43,097 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2025-01-02 00:57:43,102 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2025-01-02 00:57:43,555 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-01-02 00:57:43,555 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2025-01-02 00:57:43,560 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:57:43,560 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:43,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:43,567 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2025-01-02 00:57:43,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:43,581 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2025-01-02 00:57:43,635 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-01-02 00:57:43,635 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2025-01-02 00:57:43,635 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2025-01-02 00:57:43,635 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-02 00:57:43,636 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-02 00:57:43,643 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2025-01-02 00:57:43,650 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2025-01-02 00:57:43,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:57:43,792 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2025-01-02 00:57:43,801 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..11d35873542022d9638ede115d0dfab4652f8e62' 2025-01-02 00:57:43,808 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#294](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2025-01-02 00:57:43,814 [ scc.config] DEBUG Found github.token 2025-01-02 00:57:43,814 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2025-01-02 00:57:43,815 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2025-01-02 00:57:43,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:43,830 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2025-01-02 00:57:43,883 [ scc.git] DEBUG Auto-merging .isort.cfg 2025-01-02 00:57:43,883 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2025-01-02 00:57:43,883 [ scc.git] DEBUG Auto-merging setup.py 2025-01-02 00:57:43,883 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-01-02 00:57:43,883 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2025-01-02 00:57:43,883 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2025-01-02 00:57:43,883 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2025-01-02 00:57:43,883 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-02 00:57:43,883 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-02 00:57:43,890 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2025-01-02 00:57:43,897 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2025-01-02 00:57:44,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:57:44,174 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 553b35f498764274f8dc882fb54c7e0a30fb6737' 2025-01-02 00:57:44,181 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..11d35873542022d9638ede115d0dfab4652f8e62' 2025-01-02 00:57:44,187 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#294](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2025-01-02 00:57:44,191 [ scc.config] DEBUG Found github.token 2025-01-02 00:57:44,191 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2025-01-02 00:57:44,192 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2025-01-02 00:57:44,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:44,204 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2025-01-02 00:57:44,218 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-01-02 00:57:44,218 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2025-01-02 00:57:44,219 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:57:44,222 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2025-01-02 00:57:44,222 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2025-01-02 00:57:44,222 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2025-01-02 00:57:44,222 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2025-01-02 00:57:44,222 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2025-01-02 00:57:44,222 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2025-01-02 00:57:44,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:57:44,560 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:57:44,602 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:44,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:44,609 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:57:44,652 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:57:44,659 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561ce604f0> has no local changes 2025-01-02 00:57:44,659 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:57:44,668 [ scc.git] DEBUG [detached HEAD 533a6be] merge master -Dorg -Ssuccess-only 2025-01-02 00:57:44,668 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:57:44,668 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:57:45,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2025-01-02 00:57:45,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None 2025-01-02 00:57:45,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2025-01-02 00:57:46,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2025-01-02 00:57:46,486 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:57:46,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-01-02 00:57:46,487 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:46,487 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:46,494 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:57:46,499 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:57:46,500 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:57:46,505 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:57:46,511 [ scc.git] DEBUG Already up to date. 2025-01-02 00:57:46,511 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:57:46,511 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:46,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:46,516 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:57:46,556 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:46,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:46,561 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:57:46,601 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:57:46,608 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561ce55580> has no local changes 2025-01-02 00:57:46,608 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:57:46,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:57:46,618 [ scc.git] DEBUG [detached HEAD 06ae10ef] merge master -Dorg -Ssuccess-only 2025-01-02 00:57:46,618 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:57:46,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2025-01-02 00:57:47,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2025-01-02 00:57:47,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2025-01-02 00:57:48,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-01-02 00:57:48,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:57:49,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-01-02 00:57:49,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:57:49,820 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2025-01-02 00:57:49,820 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:57:49,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-01-02 00:57:49,820 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:49,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:49,826 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:57:49,832 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:57:49,832 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:57:49,839 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:57:49,846 [ scc.git] DEBUG Already up to date. 2025-01-02 00:57:49,846 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2025-01-02 00:57:50,154 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-01-02 00:57:50,155 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2025-01-02 00:57:50,161 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:57:50,161 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:50,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:50,166 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-01-02 00:57:50,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:50,178 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-01-02 00:57:50,190 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2025-01-02 00:57:50,190 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:57:50,193 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2025-01-02 00:57:50,193 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-01-02 00:57:50,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:57:50,330 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:57:50,374 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:57:50,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:57:50,382 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:57:50,424 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:57:50,431 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561ce449a0> has no local changes 2025-01-02 00:57:50,431 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:57:50,440 [ scc.git] DEBUG [detached HEAD d4dbfa3] merge master -Dorg -Ssuccess-only 2025-01-02 00:57:50,441 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:57:50,441 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:57:50,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2025-01-02 00:57:51,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2025-01-02 00:57:51,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2025-01-02 00:57:52,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2025-01-02 00:57:52,429 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-02 00:57:53,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-01-02 00:57:53,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:57:54,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-02 00:57:54,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-01-02 00:57:55,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:57:55,082 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-01-02 00:57:55,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2025-01-02 00:57:55,541 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-02 00:57:56,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-01-02 00:57:56,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:57:57,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-02 00:57:57,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-01-02 00:57:57,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:57:57,951 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-01-02 00:57:58,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2025-01-02 00:57:58,417 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-02 00:57:59,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-01-02 00:57:59,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:57:59,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-02 00:58:00,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-01-02 00:58:00,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:58:00,970 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-01-02 00:58:01,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2025-01-02 00:58:01,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2025-01-02 00:58:01,881 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-02 00:58:02,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-01-02 00:58:03,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:58:03,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-02 00:58:03,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-01-02 00:58:04,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:58:04,392 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-01-02 00:58:04,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2025-01-02 00:58:04,849 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-02 00:58:05,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-01-02 00:58:05,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:58:06,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-02 00:58:06,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-01-02 00:58:07,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:58:07,359 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-01-02 00:58:07,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2025-01-02 00:58:07,855 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-02 00:58:08,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-01-02 00:58:08,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:58:09,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-02 00:58:09,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-01-02 00:58:10,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:58:10,393 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-01-02 00:58:10,393 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:58:10,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-01-02 00:58:10,393 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:10,394 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:10,400 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:58:10,406 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:58:10,406 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:58:10,413 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:58:10,419 [ scc.git] DEBUG Already up to date. 2025-01-02 00:58:10,419 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2025-01-02 00:58:10,735 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-02 00:58:10,735 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2025-01-02 00:58:10,740 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2025-01-02 00:58:11,044 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-02 00:58:11,044 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2025-01-02 00:58:11,049 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2025-01-02 00:58:11,398 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-02 00:58:11,399 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2025-01-02 00:58:11,403 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2025-01-02 00:58:11,707 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-02 00:58:11,707 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2025-01-02 00:58:11,712 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2025-01-02 00:58:11,996 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-02 00:58:11,997 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2025-01-02 00:58:12,002 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2025-01-02 00:58:12,293 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-01-02 00:58:12,294 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2025-01-02 00:58:12,299 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:58:12,299 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:12,299 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:12,305 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-01-02 00:58:12,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:12,366 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-01-02 00:58:12,468 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:58:12,474 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2025-01-02 00:58:12,474 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2025-01-02 00:58:12,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:58:12,614 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-01-02 00:58:12,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:12,676 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-01-02 00:58:12,825 [ scc.git] DEBUG Auto-merging package-lock.json 2025-01-02 00:58:12,826 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:58:12,832 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2025-01-02 00:58:12,832 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2025-01-02 00:58:13,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:58:13,003 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-01-02 00:58:13,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:13,031 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-01-02 00:58:13,129 [ scc.git] DEBUG Auto-merging package-lock.json 2025-01-02 00:58:13,130 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-01-02 00:58:13,130 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-02 00:58:13,130 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-02 00:58:13,136 [ scc.git] DEBUG Calling 'git reset --hard c7d954e1ab5fa479e6e40d82aa06f1db5d2dbeff' 2025-01-02 00:58:13,144 [ scc.git] DEBUG HEAD is now at c7d954e merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2025-01-02 00:58:13,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:58:13,405 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-01-02 00:58:13,412 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-01-02 00:58:13,417 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#294](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2025-01-02 00:58:13,422 [ scc.config] DEBUG Found github.token 2025-01-02 00:58:13,422 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2025-01-02 00:58:13,422 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-01-02 00:58:13,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:13,434 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-01-02 00:58:13,469 [ scc.git] DEBUG Auto-merging package-lock.json 2025-01-02 00:58:13,470 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:58:13,474 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2025-01-02 00:58:13,474 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2025-01-02 00:58:13,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:58:13,800 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-01-02 00:58:13,830 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:13,836 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-01-02 00:58:13,867 [ scc.git] DEBUG Auto-merging package-lock.json 2025-01-02 00:58:13,868 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:58:13,874 [ scc.git] DEBUG package-lock.json | 6 +++--- 2025-01-02 00:58:13,874 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2025-01-02 00:58:14,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:58:14,187 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-01-02 00:58:14,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:14,246 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-01-02 00:58:14,286 [ scc.git] DEBUG Auto-merging package-lock.json 2025-01-02 00:58:14,286 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-01-02 00:58:14,286 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-02 00:58:14,286 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-02 00:58:14,294 [ scc.git] DEBUG Calling 'git reset --hard 11353adce71d71f40dab16f7b67599a31dc00824' 2025-01-02 00:58:14,301 [ scc.git] DEBUG HEAD is now at 11353ad merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-01-02 00:58:14,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:58:14,603 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-01-02 00:58:14,610 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-01-02 00:58:14,617 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#294](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2025-01-02 00:58:14,624 [ scc.config] DEBUG Found github.token 2025-01-02 00:58:14,624 [ scc.git] DEBUG Adding comment to issue #118. 2025-01-02 00:58:15,367 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 201 2394 2025-01-02 00:58:15,368 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:58:15,412 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:15,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:15,418 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:58:15,459 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:58:15,467 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561ce31b20> has no local changes 2025-01-02 00:58:15,468 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:58:15,476 [ scc.git] DEBUG [detached HEAD b52a1e3] merge master -Dorg -Ssuccess-only 2025-01-02 00:58:15,476 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:58:15,477 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:58:15,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2025-01-02 00:58:16,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2025-01-02 00:58:16,371 [ scc.repo] DEBUG # ... Include label: dependencies 2025-01-02 00:58:16,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-01-02 00:58:17,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:58:17,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-02 00:58:18,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-01-02 00:58:18,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:58:18,863 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-01-02 00:58:19,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2025-01-02 00:58:19,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2025-01-02 00:58:20,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2025-01-02 00:58:20,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2025-01-02 00:58:21,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-01-02 00:58:21,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:58:22,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-02 00:58:22,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-01-02 00:58:23,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:58:23,334 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2025-01-02 00:58:23,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2025-01-02 00:58:24,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2025-01-02 00:58:24,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-01-02 00:58:25,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:58:25,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-02 00:58:26,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-01-02 00:58:26,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:58:26,643 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2025-01-02 00:58:27,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2025-01-02 00:58:27,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2025-01-02 00:58:28,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-01-02 00:58:28,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:58:29,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-01-02 00:58:29,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:58:29,421 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2025-01-02 00:58:29,421 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:58:29,421 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-01-02 00:58:29,421 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:29,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:29,428 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:58:29,434 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:58:29,434 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:58:29,440 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:58:29,447 [ scc.git] DEBUG Already up to date. 2025-01-02 00:58:29,447 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-01-02 00:58:30,179 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-01-02 00:58:30,179 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-01-02 00:58:30,184 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2025-01-02 00:58:32,074 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-01-02 00:58:32,074 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2025-01-02 00:58:32,079 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2025-01-02 00:58:32,467 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-01-02 00:58:32,468 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2025-01-02 00:58:32,472 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2025-01-02 00:58:32,757 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-01-02 00:58:32,757 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2025-01-02 00:58:32,762 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:58:32,762 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:32,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:32,769 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-01-02 00:58:32,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:32,782 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-01-02 00:58:32,797 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2025-01-02 00:58:32,798 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:58:32,801 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2025-01-02 00:58:32,801 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2025-01-02 00:58:32,802 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2025-01-02 00:58:32,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:58:32,956 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2025-01-02 00:58:32,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:32,970 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2025-01-02 00:58:33,114 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2025-01-02 00:58:33,114 [ scc.git] DEBUG Auto-merging src/app/context.js 2025-01-02 00:58:33,115 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2025-01-02 00:58:33,115 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2025-01-02 00:58:33,115 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:58:33,119 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2025-01-02 00:58:33,119 [ scc.git] DEBUG src/app/context.js | 6 +- 2025-01-02 00:58:33,119 [ scc.git] DEBUG src/app/header.html | 5 + 2025-01-02 00:58:33,119 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2025-01-02 00:58:33,119 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2025-01-02 00:58:33,119 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2025-01-02 00:58:33,120 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2025-01-02 00:58:33,120 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2025-01-02 00:58:33,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:58:33,575 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2025-01-02 00:58:33,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:33,589 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2025-01-02 00:58:33,604 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2025-01-02 00:58:33,604 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:58:33,608 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2025-01-02 00:58:33,608 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2025-01-02 00:58:33,608 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2025-01-02 00:58:33,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:58:33,963 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-01-02 00:58:34,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:34,016 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-01-02 00:58:34,112 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:58:34,122 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2025-01-02 00:58:34,122 [ scc.git] DEBUG package.json | 2 +- 2025-01-02 00:58:34,122 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2025-01-02 00:58:34,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:58:34,346 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:58:34,386 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:34,386 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:34,392 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:58:34,433 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:58:34,443 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561ce2ce80> has no local changes 2025-01-02 00:58:34,443 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:58:34,456 [ scc.git] DEBUG [detached HEAD 792c7db] merge master -Dorg -Ssuccess-only 2025-01-02 00:58:34,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:58:34,456 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:58:34,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2025-01-02 00:58:35,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2025-01-02 00:58:35,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2025-01-02 00:58:36,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-01-02 00:58:36,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:58:37,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-01-02 00:58:37,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:58:37,831 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2025-01-02 00:58:37,831 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:58:37,831 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-01-02 00:58:37,832 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:37,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:37,838 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:58:37,844 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:58:37,844 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:58:37,849 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:58:37,856 [ scc.git] DEBUG Already up to date. 2025-01-02 00:58:37,856 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2025-01-02 00:58:38,205 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-01-02 00:58:38,205 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2025-01-02 00:58:38,210 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:58:38,210 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:38,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:38,216 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-01-02 00:58:38,222 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:38,227 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-01-02 00:58:38,237 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:58:38,240 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2025-01-02 00:58:38,240 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2025-01-02 00:58:38,240 [ scc.git] DEBUG requirements.txt | 2 +- 2025-01-02 00:58:38,240 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2025-01-02 00:58:38,240 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2025-01-02 00:58:38,240 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2025-01-02 00:58:38,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:58:38,378 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:58:38,423 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:38,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:38,430 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:58:38,468 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:58:38,475 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561c5cd5b0> has no local changes 2025-01-02 00:58:38,475 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:58:38,485 [ scc.git] DEBUG [detached HEAD d486832] merge master -Dorg -Ssuccess-only 2025-01-02 00:58:38,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:58:38,486 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:58:38,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2025-01-02 00:58:39,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2025-01-02 00:58:39,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2025-01-02 00:58:40,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-01-02 00:58:41,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:58:42,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-01-02 00:58:42,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:58:42,924 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-01-02 00:58:43,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2025-01-02 00:58:43,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2025-01-02 00:58:44,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-01-02 00:58:44,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:58:46,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-01-02 00:58:46,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:58:46,934 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-01-02 00:58:46,934 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:58:46,935 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-01-02 00:58:46,935 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:46,935 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:46,941 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:58:46,946 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:58:46,946 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:58:46,953 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:58:46,960 [ scc.git] DEBUG Already up to date. 2025-01-02 00:58:46,960 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2025-01-02 00:58:47,401 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-01-02 00:58:47,402 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2025-01-02 00:58:47,406 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2025-01-02 00:58:48,148 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-01-02 00:58:48,148 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2025-01-02 00:58:48,153 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:58:48,154 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:48,154 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:48,165 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-01-02 00:58:48,174 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:48,179 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-01-02 00:58:48,399 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2025-01-02 00:58:48,399 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2025-01-02 00:58:48,399 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-01-02 00:58:48,399 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-01-02 00:58:48,400 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-02 00:58:48,400 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-02 00:58:48,407 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-01-02 00:58:48,414 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2025-01-02 00:58:48,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:58:48,589 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-01-02 00:58:48,596 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-01-02 00:58:48,667 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#294](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2025-01-02 00:58:48,672 [ scc.config] DEBUG Found github.token 2025-01-02 00:58:48,673 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2025-01-02 00:58:48,673 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2025-01-02 00:58:48,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:48,685 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2025-01-02 00:58:48,791 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-01-02 00:58:48,792 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-01-02 00:58:48,792 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2025-01-02 00:58:48,792 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-02 00:58:48,792 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-02 00:58:48,799 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-01-02 00:58:48,807 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2025-01-02 00:58:48,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:58:48,968 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 78e55539b68e351ed5ef202854718b49a37729a7' 2025-01-02 00:58:48,977 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-01-02 00:58:48,983 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#294](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2025-01-02 00:58:48,988 [ scc.config] DEBUG Found github.token 2025-01-02 00:58:48,988 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2025-01-02 00:58:48,989 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:58:49,033 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:49,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:49,040 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:58:49,081 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:58:49,088 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561c5e0b80> has no local changes 2025-01-02 00:58:49,089 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:58:49,097 [ scc.git] DEBUG [detached HEAD bc3d691] merge master -Dorg -Ssuccess-only 2025-01-02 00:58:49,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:58:49,097 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:58:49,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2025-01-02 00:58:49,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2025-01-02 00:58:50,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2025-01-02 00:58:50,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2025-01-02 00:58:51,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2025-01-02 00:58:51,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2025-01-02 00:58:52,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2025-01-02 00:58:52,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2025-01-02 00:58:52,828 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:58:52,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-01-02 00:58:52,829 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:52,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:52,834 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:58:52,840 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:58:52,840 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:58:52,845 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:58:52,851 [ scc.git] DEBUG Already up to date. 2025-01-02 00:58:52,851 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:58:52,851 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:52,851 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:52,856 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:58:52,898 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:52,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:52,904 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:58:52,947 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:58:52,953 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561cdf8f40> has no local changes 2025-01-02 00:58:52,954 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:58:52,965 [ scc.git] DEBUG [detached HEAD 684987b] merge master -Dorg -Ssuccess-only 2025-01-02 00:58:52,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:58:52,965 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:58:53,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2 2025-01-02 00:58:53,210 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:58:53,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-01-02 00:58:53,210 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:53,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:53,217 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:58:53,222 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:58:53,222 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:58:53,229 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:58:53,236 [ scc.git] DEBUG Already up to date. 2025-01-02 00:58:53,236 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:58:53,236 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:53,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:53,243 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:58:53,287 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:53,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:53,294 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:58:53,338 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:58:53,344 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561c582940> has no local changes 2025-01-02 00:58:53,345 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:58:53,354 [ scc.git] DEBUG [detached HEAD 0288cf2] merge master -Dorg -Ssuccess-only 2025-01-02 00:58:53,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:58:53,355 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:58:53,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2025-01-02 00:58:54,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2025-01-02 00:58:54,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2025-01-02 00:58:55,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2025-01-02 00:58:55,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:58:55,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2025-01-02 00:58:56,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:58:56,378 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2025-01-02 00:58:56,378 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:58:56,378 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-01-02 00:58:56,379 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:56,379 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:56,385 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:58:56,390 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:58:56,390 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:58:56,396 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:58:56,402 [ scc.git] DEBUG Already up to date. 2025-01-02 00:58:56,402 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2025-01-02 00:58:56,761 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-01-02 00:58:56,761 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2025-01-02 00:58:56,766 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:58:56,766 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:56,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:56,772 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2025-01-02 00:58:56,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:56,784 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2025-01-02 00:58:56,795 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2025-01-02 00:58:56,796 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:58:56,798 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2025-01-02 00:58:56,798 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2025-01-02 00:58:56,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:58:56,940 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:58:56,981 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:58:56,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:58:56,987 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:58:57,035 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:58:57,043 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561c53d5e0> has no local changes 2025-01-02 00:58:57,044 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:58:57,054 [ scc.git] DEBUG [detached HEAD 8304db6] merge master -Dorg -Ssuccess-only 2025-01-02 00:58:57,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:58:57,054 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:58:57,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2025-01-02 00:58:57,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2025-01-02 00:58:58,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2025-01-02 00:58:58,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-01-02 00:58:59,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:58:59,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-01-02 00:59:00,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:59:00,354 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2025-01-02 00:59:00,354 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:59:00,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-01-02 00:59:00,354 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:00,354 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:00,360 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:59:00,366 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:59:00,366 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:59:00,373 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:59:00,380 [ scc.git] DEBUG Already up to date. 2025-01-02 00:59:00,380 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-01-02 00:59:00,834 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-01-02 00:59:00,835 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-01-02 00:59:00,839 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:59:00,839 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:00,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:00,846 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-01-02 00:59:00,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:00,859 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-01-02 00:59:00,969 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2025-01-02 00:59:00,969 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2025-01-02 00:59:00,969 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2025-01-02 00:59:00,969 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2025-01-02 00:59:00,970 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-02 00:59:00,970 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2025-01-02 00:59:00,970 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2025-01-02 00:59:00,970 [ scc.git] DEBUG Auto-merging setup.py 2025-01-02 00:59:00,970 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2025-01-02 00:59:00,973 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-02 00:59:00,976 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2025-01-02 00:59:00,984 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2025-01-02 00:59:01,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:01,127 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-01-02 00:59:01,134 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2025-01-02 00:59:01,151 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#294](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/consoleText) for more details. Possible conflicts: - Upstream changes - setup.py - omero_signup/signup_settings.py - omero_signup/urls.py - omero_signup/views.py --conflicts 2025-01-02 00:59:01,157 [ scc.config] DEBUG Found github.token 2025-01-02 00:59:01,157 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2025-01-02 00:59:01,157 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:59:01,201 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:01,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:01,207 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:59:01,252 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:59:01,260 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561c53d7f0> has no local changes 2025-01-02 00:59:01,261 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:59:01,272 [ scc.git] DEBUG [detached HEAD 3bfda4e] merge master -Dorg -Ssuccess-only 2025-01-02 00:59:01,272 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:01,272 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:59:01,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2025-01-02 00:59:02,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2025-01-02 00:59:02,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2025-01-02 00:59:03,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2025-01-02 00:59:03,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:59:04,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-02 00:59:04,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2025-01-02 00:59:04,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2025-01-02 00:59:05,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2025-01-02 00:59:05,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2025-01-02 00:59:06,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-01-02 00:59:06,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:59:07,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-01-02 00:59:07,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:59:07,798 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-01-02 00:59:07,798 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:59:07,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-01-02 00:59:07,799 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:07,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:07,806 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:59:07,812 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:59:07,813 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:59:07,818 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:59:07,824 [ scc.git] DEBUG Already up to date. 2025-01-02 00:59:07,824 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2025-01-02 00:59:08,179 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-01-02 00:59:08,180 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2025-01-02 00:59:08,184 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:59:08,185 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:08,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:08,190 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2025-01-02 00:59:08,197 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:08,201 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2025-01-02 00:59:08,214 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:59:08,217 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2025-01-02 00:59:08,218 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2025-01-02 00:59:08,218 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2025-01-02 00:59:08,218 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2025-01-02 00:59:08,218 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2025-01-02 00:59:08,218 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2025-01-02 00:59:08,218 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2025-01-02 00:59:08,219 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2025-01-02 00:59:08,220 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2025-01-02 00:59:08,220 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2025-01-02 00:59:08,220 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2025-01-02 00:59:08,220 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2025-01-02 00:59:08,220 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2025-01-02 00:59:08,220 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2025-01-02 00:59:08,220 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2025-01-02 00:59:08,220 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2025-01-02 00:59:08,220 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2025-01-02 00:59:08,220 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2025-01-02 00:59:08,220 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2025-01-02 00:59:08,220 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2025-01-02 00:59:08,220 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2025-01-02 00:59:08,220 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2025-01-02 00:59:08,220 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2025-01-02 00:59:08,220 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2025-01-02 00:59:08,220 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2025-01-02 00:59:08,220 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2025-01-02 00:59:08,220 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2025-01-02 00:59:08,220 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2025-01-02 00:59:08,221 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2025-01-02 00:59:08,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:08,366 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:59:08,406 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:08,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:08,412 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:59:08,451 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:59:08,460 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561c53d640> has no local changes 2025-01-02 00:59:08,461 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:59:08,473 [ scc.git] DEBUG [detached HEAD 4fa1cb8] merge master -Dorg -Ssuccess-only 2025-01-02 00:59:08,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:08,474 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:59:08,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2025-01-02 00:59:08,773 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:59:08,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-01-02 00:59:08,773 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:08,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:08,780 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:59:08,785 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:59:08,786 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:59:08,791 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:59:08,797 [ scc.git] DEBUG Already up to date. 2025-01-02 00:59:08,798 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:59:08,798 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:08,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:08,803 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:59:08,843 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:08,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:08,849 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:59:08,890 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:59:08,896 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561c58f4c0> has no local changes 2025-01-02 00:59:08,897 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:59:08,905 [ scc.git] DEBUG [detached HEAD 932a4c6] merge master -Dorg -Ssuccess-only 2025-01-02 00:59:08,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:08,906 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:59:09,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2025-01-02 00:59:09,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None 2025-01-02 00:59:10,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20/comments HTTP/1.1" 200 None 2025-01-02 00:59:10,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2025-01-02 00:59:11,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:59:11,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-02 00:59:12,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2025-01-02 00:59:12,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:59:12,616 [ scc.repo] DEBUG - PR 20 jburel 'Build' 2025-01-02 00:59:12,616 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:59:12,616 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-01-02 00:59:12,616 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:12,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:12,623 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:59:12,628 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:59:12,628 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:59:12,634 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:59:12,639 [ scc.git] DEBUG Already up to date. 2025-01-02 00:59:12,639 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head' 2025-01-02 00:59:13,466 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2025-01-02 00:59:13,466 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD 2025-01-02 00:59:13,472 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:59:13,472 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:13,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:13,478 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea' 2025-01-02 00:59:13,483 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:13,488 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea' 2025-01-02 00:59:13,497 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:59:13,499 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2025-01-02 00:59:13,499 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2025-01-02 00:59:13,499 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2025-01-02 00:59:13,500 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2025-01-02 00:59:13,500 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2025-01-02 00:59:13,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:13,641 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:59:13,681 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:13,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:13,689 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:59:13,729 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:59:13,736 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561c58f790> has no local changes 2025-01-02 00:59:13,736 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:59:13,745 [ scc.git] DEBUG [detached HEAD 3fc4b28] merge master -Dorg -Ssuccess-only 2025-01-02 00:59:13,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:13,746 [ scc.git] INFO Overriding base-branch from master to main 2025-01-02 00:59:13,746 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:59:14,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2025-01-02 00:59:14,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None 2025-01-02 00:59:15,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None 2025-01-02 00:59:15,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None 2025-01-02 00:59:16,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:59:16,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-02 00:59:17,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2025-01-02 00:59:17,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2025-01-02 00:59:18,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2025-01-02 00:59:18,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-01-02 00:59:18,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:59:19,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-01-02 00:59:19,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:59:19,894 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-01-02 00:59:19,894 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:59:19,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-01-02 00:59:19,894 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:19,894 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:19,900 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2025-01-02 00:59:19,907 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:59:19,907 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2025-01-02 00:59:19,914 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2025-01-02 00:59:19,920 [ scc.git] DEBUG Already up to date. 2025-01-02 00:59:19,920 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2025-01-02 00:59:20,233 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-01-02 00:59:20,233 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2025-01-02 00:59:20,238 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:59:20,238 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:20,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:20,243 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-01-02 00:59:20,249 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:20,253 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-01-02 00:59:20,350 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2025-01-02 00:59:20,350 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2025-01-02 00:59:20,350 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-02 00:59:20,350 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-02 00:59:20,356 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-01-02 00:59:20,363 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build 2025-01-02 00:59:20,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:20,512 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-01-02 00:59:20,519 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-01-02 00:59:20,524 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#294](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2025-01-02 00:59:20,529 [ scc.config] DEBUG Found github.token 2025-01-02 00:59:20,530 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2025-01-02 00:59:20,530 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:59:20,568 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:20,568 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:20,573 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:59:20,614 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:59:20,621 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561c516580> has no local changes 2025-01-02 00:59:20,621 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:59:20,629 [ scc.git] DEBUG [detached HEAD 50bdbe5] merge master -Dorg -Ssuccess-only 2025-01-02 00:59:20,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:20,630 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:59:20,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2025-01-02 00:59:20,989 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:59:20,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-01-02 00:59:20,989 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:20,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:20,996 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:59:21,001 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:59:21,001 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:59:21,008 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:59:21,015 [ scc.git] DEBUG Already up to date. 2025-01-02 00:59:21,015 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:59:21,015 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:21,015 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:21,021 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:59:21,066 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:21,066 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:21,072 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:59:21,116 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:59:21,124 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561c5164f0> has no local changes 2025-01-02 00:59:21,124 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:59:21,133 [ scc.git] DEBUG [detached HEAD b9d358e] merge master -Dorg -Ssuccess-only 2025-01-02 00:59:21,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:21,134 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:59:21,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2025-01-02 00:59:21,392 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:59:21,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-01-02 00:59:21,393 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:21,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:21,399 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:59:21,405 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:59:21,406 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:59:21,412 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:59:21,419 [ scc.git] DEBUG Already up to date. 2025-01-02 00:59:21,419 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:59:21,419 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:21,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:21,425 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:59:21,466 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:21,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:21,472 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:59:21,513 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:59:21,520 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561c527bb0> has no local changes 2025-01-02 00:59:21,520 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:59:21,529 [ scc.git] DEBUG [detached HEAD dc24c8e] merge master -Dorg -Ssuccess-only 2025-01-02 00:59:21,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:21,530 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:59:21,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2025-01-02 00:59:22,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2025-01-02 00:59:22,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2025-01-02 00:59:23,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-01-02 00:59:23,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:59:24,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-01-02 00:59:24,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:59:24,525 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2025-01-02 00:59:24,525 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:59:24,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-01-02 00:59:24,526 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:24,526 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:24,533 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-01-02 00:59:24,539 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:59:24,539 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-01-02 00:59:24,545 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-01-02 00:59:24,550 [ scc.git] DEBUG Already up to date. 2025-01-02 00:59:24,551 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2025-01-02 00:59:24,854 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2025-01-02 00:59:24,854 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2025-01-02 00:59:24,858 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:59:24,858 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:24,859 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:24,866 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-01-02 00:59:24,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:24,878 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-01-02 00:59:25,050 [ scc.git] DEBUG Auto-merging Dockerfile 2025-01-02 00:59:25,051 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2025-01-02 00:59:25,051 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-02 00:59:25,051 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-02 00:59:25,057 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-01-02 00:59:25,065 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-01-02 00:59:25,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:25,240 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-01-02 00:59:25,246 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-01-02 00:59:25,252 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#294](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2025-01-02 00:59:25,258 [ scc.config] DEBUG Found github.token 2025-01-02 00:59:25,258 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2025-01-02 00:59:25,258 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:59:25,303 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:25,303 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:25,310 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:59:25,352 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:59:25,360 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561c4cea30> has no local changes 2025-01-02 00:59:25,360 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:59:25,371 [ scc.git] DEBUG [detached HEAD d13c981] merge master -Dorg -Ssuccess-only 2025-01-02 00:59:25,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:25,371 [ scc.git] INFO Overriding base-branch from master to develop 2025-01-02 00:59:25,372 [ scc.repo] DEBUG ## PRs found: 2025-01-02 00:59:25,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-01-02 00:59:26,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-01-02 00:59:26,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-01-02 00:59:27,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-01-02 00:59:27,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:59:28,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-01-02 00:59:28,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-01-02 00:59:28,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:59:28,894 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-01-02 00:59:29,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-01-02 00:59:29,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-01-02 00:59:30,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-01-02 00:59:30,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-01-02 00:59:31,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-01-02 00:59:31,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-01-02 00:59:31,568 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-01-02 00:59:32,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-01-02 00:59:32,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-01-02 00:59:33,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-01-02 00:59:33,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-01-02 00:59:33,516 [ scc.repo] DEBUG ## Branches found: 2025-01-02 00:59:33,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-01-02 00:59:33,517 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:33,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:33,523 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-01-02 00:59:33,528 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-01-02 00:59:33,529 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-01-02 00:59:33,534 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-01-02 00:59:33,540 [ scc.git] DEBUG Already up to date. 2025-01-02 00:59:33,540 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-01-02 00:59:34,566 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-01-02 00:59:34,567 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-01-02 00:59:34,573 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-01-02 00:59:34,880 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-01-02 00:59:34,880 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-01-02 00:59:34,885 [ scc.git] DEBUG ## Unique users: [] 2025-01-02 00:59:34,885 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:34,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:34,890 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-01-02 00:59:34,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:34,903 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-01-02 00:59:34,935 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-01-02 00:59:34,935 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-01-02 00:59:34,936 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-01-02 00:59:34,942 [ scc.git] DEBUG Calling 'git reset --hard 4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-01-02 00:59:34,948 [ scc.git] DEBUG HEAD is now at 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2025-01-02 00:59:35,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:35,083 [ scc.git] DEBUG Calling 'git merge-base 4b4c755af4ccf8a5e709548d1f8415fab48a4867 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-01-02 00:59:35,091 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-01-02 00:59:35,098 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#294](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-01-02 00:59:35,103 [ scc.config] DEBUG Found github.token 2025-01-02 00:59:35,103 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-01-02 00:59:35,103 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-01-02 00:59:35,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:35,115 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-01-02 00:59:35,127 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-01-02 00:59:35,130 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-01-02 00:59:35,130 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-01-02 00:59:35,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:35,473 [ scc.git] DEBUG Calling 'git submodule update' 2025-01-02 00:59:35,518 [ scc.git] DEBUG Get sha1 of %s 2025-01-02 00:59:35,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-01-02 00:59:35,525 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:59:35,568 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:59:35,576 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561c4ce670> has no local changes 2025-01-02 00:59:35,576 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:59:35,585 [ scc.git] DEBUG [detached HEAD e5fe44c] merge master -Dorg -Ssuccess-only 2025-01-02 00:59:35,585 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:35,586 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-01-02 00:59:35,706 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2025-01-02 00:59:35,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:35,871 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2025-01-02 00:59:35,876 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2025-01-02 00:59:36,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:36,279 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2025-01-02 00:59:36,286 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2025-01-02 00:59:36,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:36,676 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2025-01-02 00:59:36,682 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2025-01-02 00:59:37,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:37,078 [ scc.config] DEBUG Found submodule.omero-figure.url 2025-01-02 00:59:37,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:37,462 [ scc.config] DEBUG Found submodule.omero-figure.branch 2025-01-02 00:59:37,469 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2025-01-02 00:59:37,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:37,850 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2025-01-02 00:59:37,856 [ scc.config] DEBUG Found submodule.omero-gallery.url 2025-01-02 00:59:38,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:38,254 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2025-01-02 00:59:38,261 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2025-01-02 00:59:38,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:38,643 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2025-01-02 00:59:38,649 [ scc.config] DEBUG Found submodule.omero-mapr.url 2025-01-02 00:59:39,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:39,038 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2025-01-02 00:59:39,043 [ scc.config] DEBUG Found submodule.omero-metadata.url 2025-01-02 00:59:39,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:39,458 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2025-01-02 00:59:39,463 [ scc.config] DEBUG Found submodule.omero-parade.url 2025-01-02 00:59:39,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:39,848 [ scc.config] DEBUG Found submodule.omero-parade.branch 2025-01-02 00:59:39,854 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2025-01-02 00:59:40,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:40,242 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2025-01-02 00:59:40,248 [ scc.config] DEBUG Found submodule.omero-rois.url 2025-01-02 00:59:40,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:40,640 [ scc.config] DEBUG Found submodule.omero-signup.url 2025-01-02 00:59:41,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:41,033 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2025-01-02 00:59:41,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:41,414 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2025-01-02 00:59:41,420 [ scc.config] DEBUG Found submodule.omero-upload.url 2025-01-02 00:59:41,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:41,823 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2025-01-02 00:59:42,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:42,214 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2025-01-02 00:59:42,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:42,588 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2025-01-02 00:59:42,594 [ scc.config] DEBUG Found submodule.omero-weberror.url 2025-01-02 00:59:42,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:42,980 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2025-01-02 00:59:42,985 [ scc.config] DEBUG Found submodule.omero-webtest.url 2025-01-02 00:59:43,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:43,360 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2025-01-02 00:59:43,366 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2025-01-02 00:59:43,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:43,742 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2025-01-02 00:59:43,748 [ scc.config] DEBUG Found submodule.scripts.url 2025-01-02 00:59:44,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-01-02 00:59:44,131 [ scc.config] DEBUG Found submodule.scripts.branch 2025-01-02 00:59:44,132 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-01-02 00:59:44,225 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f561df18be0> has local changes 2025-01-02 00:59:44,225 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Repository: ome/omero-prometheus-tools Already up to date. Repository: ome/omero-rois Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#294 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/294/)' 2025-01-02 00:59:44,241 [ scc.git] DEBUG [detached HEAD c2772a5] merge master -Dorg -Ssuccess-only 2025-01-02 00:59:44,241 [ scc.merge] INFO Repository: ome/omero-plugins 2025-01-02 00:59:44,242 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2025-01-02 00:59:44,242 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,242 [ scc.merge] INFO 2025-01-02 00:59:44,242 [ scc.merge] INFO Merged PRs: 2025-01-02 00:59:44,242 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-01-02 00:59:44,242 [ scc.merge] INFO 2025-01-02 00:59:44,242 [ scc.merge] INFO Repository: ome/minimal-omero-client 2025-01-02 00:59:44,242 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,242 [ scc.merge] INFO 2025-01-02 00:59:44,242 [ scc.merge] INFO 2025-01-02 00:59:44,242 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2025-01-02 00:59:44,242 [ scc.merge] INFO Excluded PRs: 2025-01-02 00:59:44,242 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2025-01-02 00:59:44,242 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,242 [ scc.merge] INFO 2025-01-02 00:59:44,242 [ scc.merge] INFO 2025-01-02 00:59:44,242 [ scc.merge] INFO Repository: ome/omero-cli-render 2025-01-02 00:59:44,242 [ scc.merge] INFO Excluded PRs: 2025-01-02 00:59:44,242 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2025-01-02 00:59:44,242 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,242 [ scc.merge] INFO 2025-01-02 00:59:44,242 [ scc.merge] INFO Merged PRs: 2025-01-02 00:59:44,242 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2025-01-02 00:59:44,242 [ scc.merge] INFO 2025-01-02 00:59:44,242 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2025-01-02 00:59:44,242 [ scc.merge] INFO Excluded PRs: 2025-01-02 00:59:44,242 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-01-02 00:59:44,243 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,243 [ scc.merge] INFO 2025-01-02 00:59:44,243 [ scc.merge] INFO Merged PRs: 2025-01-02 00:59:44,243 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2025-01-02 00:59:44,243 [ scc.merge] INFO 2025-01-02 00:59:44,243 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-02 00:59:44,243 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2025-01-02 00:59:44,243 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2025-01-02 00:59:44,243 [ scc.merge] INFO 2025-01-02 00:59:44,243 [ scc.merge] INFO Repository: ome/omero-figure 2025-01-02 00:59:44,243 [ scc.merge] INFO Excluded PRs: 2025-01-02 00:59:44,243 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) 2025-01-02 00:59:44,243 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier) 2025-01-02 00:59:44,243 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2025-01-02 00:59:44,243 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,243 [ scc.merge] INFO 2025-01-02 00:59:44,243 [ scc.merge] INFO 2025-01-02 00:59:44,243 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2025-01-02 00:59:44,243 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,243 [ scc.merge] INFO 2025-01-02 00:59:44,243 [ scc.merge] INFO Merged PRs: 2025-01-02 00:59:44,243 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2025-01-02 00:59:44,243 [ scc.merge] INFO 2025-01-02 00:59:44,243 [ scc.merge] INFO Repository: ome/omero-gallery 2025-01-02 00:59:44,243 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,243 [ scc.merge] INFO 2025-01-02 00:59:44,243 [ scc.merge] INFO Merged PRs: 2025-01-02 00:59:44,243 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-01-02 00:59:44,243 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-01-02 00:59:44,243 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-01-02 00:59:44,243 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-01-02 00:59:44,243 [ scc.merge] INFO 2025-01-02 00:59:44,243 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-02 00:59:44,243 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-01-02 00:59:44,243 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-01-02 00:59:44,244 [ scc.merge] INFO 2025-01-02 00:59:44,244 [ scc.merge] INFO Repository: ome/omero-iviewer 2025-01-02 00:59:44,244 [ scc.merge] INFO Excluded PRs: 2025-01-02 00:59:44,244 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2025-01-02 00:59:44,244 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2025-01-02 00:59:44,244 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2025-01-02 00:59:44,244 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,244 [ scc.merge] INFO 2025-01-02 00:59:44,244 [ scc.merge] INFO Merged PRs: 2025-01-02 00:59:44,244 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2025-01-02 00:59:44,244 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2025-01-02 00:59:44,244 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2025-01-02 00:59:44,244 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-01-02 00:59:44,244 [ scc.merge] INFO 2025-01-02 00:59:44,244 [ scc.merge] INFO Repository: ome/omero-mapr 2025-01-02 00:59:44,244 [ scc.merge] INFO Excluded PRs: 2025-01-02 00:59:44,244 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2025-01-02 00:59:44,244 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,244 [ scc.merge] INFO 2025-01-02 00:59:44,244 [ scc.merge] INFO Merged PRs: 2025-01-02 00:59:44,244 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2025-01-02 00:59:44,244 [ scc.merge] INFO 2025-01-02 00:59:44,244 [ scc.merge] INFO Repository: ome/omero-metadata 2025-01-02 00:59:44,244 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,244 [ scc.merge] INFO 2025-01-02 00:59:44,244 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-02 00:59:44,244 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-01-02 00:59:44,244 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-01-02 00:59:44,245 [ scc.merge] INFO 2025-01-02 00:59:44,245 [ scc.merge] INFO Repository: ome/omero-parade 2025-01-02 00:59:44,245 [ scc.merge] INFO Excluded PRs: 2025-01-02 00:59:44,245 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2025-01-02 00:59:44,245 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2025-01-02 00:59:44,245 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2025-01-02 00:59:44,245 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2025-01-02 00:59:44,245 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,245 [ scc.merge] INFO 2025-01-02 00:59:44,245 [ scc.merge] INFO 2025-01-02 00:59:44,245 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2025-01-02 00:59:44,245 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,245 [ scc.merge] INFO 2025-01-02 00:59:44,245 [ scc.merge] INFO 2025-01-02 00:59:44,245 [ scc.merge] INFO Repository: ome/omero-rois 2025-01-02 00:59:44,245 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,245 [ scc.merge] INFO 2025-01-02 00:59:44,245 [ scc.merge] INFO Merged PRs: 2025-01-02 00:59:44,245 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2025-01-02 00:59:44,245 [ scc.merge] INFO 2025-01-02 00:59:44,245 [ scc.merge] INFO Repository: ome/omero-signup 2025-01-02 00:59:44,245 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,245 [ scc.merge] INFO 2025-01-02 00:59:44,245 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-02 00:59:44,245 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2025-01-02 00:59:44,245 [ scc.merge] INFO 2025-01-02 00:59:44,245 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2025-01-02 00:59:44,245 [ scc.merge] INFO Excluded PRs: 2025-01-02 00:59:44,245 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2025-01-02 00:59:44,245 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2025-01-02 00:59:44,245 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2025-01-02 00:59:44,245 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,245 [ scc.merge] INFO 2025-01-02 00:59:44,246 [ scc.merge] INFO Merged PRs: 2025-01-02 00:59:44,246 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-01-02 00:59:44,246 [ scc.merge] INFO 2025-01-02 00:59:44,246 [ scc.merge] INFO Repository: ome/omero-upload 2025-01-02 00:59:44,246 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,246 [ scc.merge] INFO 2025-01-02 00:59:44,246 [ scc.merge] INFO 2025-01-02 00:59:44,246 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2025-01-02 00:59:44,246 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,246 [ scc.merge] INFO 2025-01-02 00:59:44,246 [ scc.merge] INFO Merged PRs: 2025-01-02 00:59:44,246 [ scc.merge] INFO - PR 20 jburel 'Build' 2025-01-02 00:59:44,246 [ scc.merge] INFO 2025-01-02 00:59:44,246 [ scc.merge] INFO Repository: ome/omero-web-zarr 2025-01-02 00:59:44,246 [ scc.merge] INFO Excluded PRs: 2025-01-02 00:59:44,246 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure) 2025-01-02 00:59:44,246 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2025-01-02 00:59:44,246 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,246 [ scc.merge] INFO 2025-01-02 00:59:44,246 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-02 00:59:44,246 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-01-02 00:59:44,246 [ scc.merge] INFO 2025-01-02 00:59:44,246 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2025-01-02 00:59:44,246 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,246 [ scc.merge] INFO 2025-01-02 00:59:44,246 [ scc.merge] INFO 2025-01-02 00:59:44,246 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2025-01-02 00:59:44,246 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,246 [ scc.merge] INFO 2025-01-02 00:59:44,246 [ scc.merge] INFO 2025-01-02 00:59:44,246 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2025-01-02 00:59:44,246 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,246 [ scc.merge] INFO 2025-01-02 00:59:44,246 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-02 00:59:44,246 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2025-01-02 00:59:44,246 [ scc.merge] INFO 2025-01-02 00:59:44,246 [ scc.merge] INFO Repository: ome/scripts 2025-01-02 00:59:44,246 [ scc.merge] INFO Excluded PRs: 2025-01-02 00:59:44,247 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-01-02 00:59:44,247 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-01-02 00:59:44,247 [ scc.merge] INFO Already up to date. 2025-01-02 00:59:44,247 [ scc.merge] INFO 2025-01-02 00:59:44,247 [ scc.merge] INFO Merged PRs: 2025-01-02 00:59:44,247 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-01-02 00:59:44,247 [ scc.merge] INFO 2025-01-02 00:59:44,247 [ scc.merge] INFO Conflicting PRs (not included): 2025-01-02 00:59:44,247 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-01-02 00:59:44,247 [ scc.merge] INFO 2025-01-02 00:59:44,247 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-01-02 00:59:44,247 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-01-02 00:59:44,253 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-01-02 00:59:44,259 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-01-02 00:59:44,265 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-01-02 00:59:44,271 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,278 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-01-02 00:59:44,278 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-01-02 00:59:44,283 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-01-02 00:59:44,289 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-01-02 00:59:44,295 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-01-02 00:59:44,301 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-01-02 00:59:44,307 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-01-02 00:59:44,313 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-01-02 00:59:44,318 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-01-02 00:59:44,325 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-01-02 00:59:44,331 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-01-02 00:59:44,336 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-01-02 00:59:44,341 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-01-02 00:59:44,346 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,351 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,351 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-01-02 00:59:44,351 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-01-02 00:59:44,358 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-01-02 00:59:44,365 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-01-02 00:59:44,371 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-01-02 00:59:44,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-01-02 00:59:44,377 [ scc.git] DEBUG Calling 'git remote' 2025-01-02 00:59:44,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: 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or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD b22e4aa] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from fb316a7e nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from b4102d4 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 38ca73d] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-01-02 01:00:32,747 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-01-02 01:00:41,665 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-01-02 01:00:44,025 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-01-02 01:00:48,439 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-01-02 01:01:27,810 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS