Started by upstream project "Trigger" build number 707 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 605 [Pipeline] sh > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.3-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.3 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.16-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.1-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.8 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.11.12-py3-none-any.whl.metadata (2.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel_yaml_clib-0.2.15-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (3.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.1-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2025.11.12-py3-none-any.whl (159 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.23-py3-none-any.whl (118 kB) Using cached ruamel.yaml-0.18.16-py3-none-any.whl (119 kB) Using cached ruamel_yaml_clib-0.2.15-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (777 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2025.11.12 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.3 future-1.0.0 idna-3.11 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.1 requests-2.32.5 ruamel.yaml-0.18.16 ruamel.yaml.clib-0.2.15 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-11-27 00:28:33,626 [ scc.config] DEBUG Found github.token 2025-11-27 00:28:33,628 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-11-27 00:28:33,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:28:34,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:28:34,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-11-27 00:28:34,668 [ scc.gh] DEBUG 3948 remaining from 5000 (Reset at 00:11 2025-11-27 00:28:34,669 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:28:34,671 [ scc.git] DEBUG Check current status 2025-11-27 00:28:34,671 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:28:34,673 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-11-27 00:28:34,674 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:28:34,719 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-11-27 00:28:34,722 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-11-27 00:28:34,725 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-11-27 00:28:34,728 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-11-27 00:28:34,732 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-11-27 00:28:34,735 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-11-27 00:28:34,738 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-11-27 00:28:34,741 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-11-27 00:28:34,744 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-11-27 00:28:34,747 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-11-27 00:28:34,750 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-11-27 00:28:34,753 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-11-27 00:28:34,756 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-11-27 00:28:34,759 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-11-27 00:28:34,762 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-11-27 00:28:34,765 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-11-27 00:28:34,768 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-11-27 00:28:34,770 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-11-27 00:28:34,773 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-11-27 00:28:34,776 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-11-27 00:28:34,778 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-11-27 00:28:34,782 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-11-27 00:28:34,784 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:28:35,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-11-27 00:28:35,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:28:36,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:28:36,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:28:37,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:28:37,074 [ scc.git] DEBUG Resetting... 2025-11-27 00:28:37,074 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-11-27 00:28:37,081 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-11-27 00:28:37,081 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-11-27 00:28:37,178 [ scc.git] DEBUG Check current status 2025-11-27 00:28:37,178 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:28:37,180 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-11-27 00:28:37,181 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:28:37,225 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-11-27 00:28:37,227 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-11-27 00:28:37,230 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-11-27 00:28:37,233 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-11-27 00:28:37,238 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-11-27 00:28:37,240 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-11-27 00:28:37,243 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-11-27 00:28:37,246 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-11-27 00:28:37,249 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-11-27 00:28:37,252 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-11-27 00:28:37,254 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-11-27 00:28:37,257 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-11-27 00:28:37,260 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-11-27 00:28:37,263 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-11-27 00:28:37,266 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-11-27 00:28:37,268 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-11-27 00:28:37,271 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-11-27 00:28:37,273 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-11-27 00:28:37,276 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-11-27 00:28:37,278 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-11-27 00:28:37,281 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-11-27 00:28:37,284 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-11-27 00:28:37,285 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-11-27 00:28:37,285 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-11-27 00:28:37,285 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-11-27 00:28:37,285 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-11-27 00:28:37,285 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-11-27 00:28:37,285 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:28:37,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-11-27 00:28:38,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-11-27 00:28:38,109 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:28:38,109 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-11-27 00:28:38,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-11-27 00:28:38,600 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:28:38,600 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-11-27 00:28:39,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-11-27 00:28:39,090 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:28:39,090 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-11-27 00:28:39,090 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:28:39,091 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:28:39,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:28:39,093 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:28:39,095 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:28:39,095 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:28:39,098 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:28:39,100 [ scc.git] DEBUG Already up to date. 2025-11-27 00:28:39,100 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-11-27 00:28:39,389 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-11-27 00:28:39,389 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-11-27 00:28:39,394 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-11-27 00:28:39,657 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-11-27 00:28:39,658 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-11-27 00:28:39,664 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-11-27 00:28:39,917 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-11-27 00:28:39,917 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-11-27 00:28:39,923 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:28:39,923 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:28:39,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:28:39,925 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-11-27 00:28:39,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:28:39,929 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-11-27 00:28:39,942 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:28:39,945 [ scc.git] DEBUG scripts | 2 +- 2025-11-27 00:28:39,945 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-27 00:28:40,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:28:40,095 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-11-27 00:28:40,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:28:40,099 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-11-27 00:28:40,113 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:28:40,115 [ scc.git] DEBUG omero-figure | 2 +- 2025-11-27 00:28:40,115 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-27 00:28:40,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:28:40,490 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-11-27 00:28:40,492 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:28:40,495 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-11-27 00:28:40,508 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:28:40,510 [ scc.git] DEBUG omero-iviewer | 2 +- 2025-11-27 00:28:40,510 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-27 00:28:40,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:28:40,888 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:28:40,947 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-11-27 00:28:40,971 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-11-27 00:28:40,984 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-11-27 00:28:40,985 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:28:40,985 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:28:40,987 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:28:41,060 [ scc.git] DEBUG has no local changes 2025-11-27 00:28:41,061 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:28:41,126 [ scc.git] DEBUG [detached HEAD d48e246] merge master -Dorg -Snone 2025-11-27 00:28:41,126 [ scc.merge] INFO Repository: ome/omero-plugins 2025-11-27 00:28:41,126 [ scc.merge] INFO Already up to date. 2025-11-27 00:28:41,126 [ scc.merge] INFO 2025-11-27 00:28:41,126 [ scc.merge] INFO Merged PRs: 2025-11-27 00:28:41,126 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-11-27 00:28:41,126 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-11-27 00:28:41,126 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-11-27 00:28:41,126 [ scc.merge] INFO 2025-11-27 00:28:41,126 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-11-27 00:28:41,126 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-zarr': checked out '37ea7000309b4f8b87c5122c138fb59b17ecf86b' Submodule path 'omero-figure': checked out '691a9a60c01bcce1f01f90d528584cb6e68124f9' Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-test-infra': checked out '40b2517588040d7ae02091fee16e4223681e8e4f' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '00e02072dc29b04eba14c080ca8a0175a1499c15' From https://github.com/ome/scripts 87f4052..0c7356a develop -> origin/develop Submodule path 'scripts': checked out '0c7356acacce8767f1317bc04057d5ddf059a2db' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2025-11-27 00:28:47,995 [ scc.config] DEBUG Found github.token 2025-11-27 00:28:47,997 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-11-27 00:28:48,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:28:48,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:28:48,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-11-27 00:28:48,973 [ scc.gh] DEBUG 3934 remaining from 5000 (Reset at 00:11 2025-11-27 00:28:48,974 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:28:48,976 [ scc.git] DEBUG Check current status 2025-11-27 00:28:48,976 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:28:48,978 [ scc.git] DEBUG d48e246 merge master -Dorg -Snone 2025-11-27 00:28:48,978 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:28:49,024 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-11-27 00:28:49,027 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-11-27 00:28:49,030 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-11-27 00:28:49,033 [ scc.git] DEBUG +37ea7000309b4f8b87c5122c138fb59b17ecf86b omero-cli-zarr (v0.7.0rc1-2-g37ea700) 2025-11-27 00:28:49,040 [ scc.git] DEBUG +691a9a60c01bcce1f01f90d528584cb6e68124f9 omero-figure (v7.2.1-116-g691a9a60) 2025-11-27 00:28:49,043 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-11-27 00:28:49,046 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-11-27 00:28:49,049 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8) 2025-11-27 00:28:49,052 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-11-27 00:28:49,055 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2025-11-27 00:28:49,058 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-11-27 00:28:49,060 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-11-27 00:28:49,064 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-11-27 00:28:49,067 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-11-27 00:28:49,070 [ scc.git] DEBUG +40b2517588040d7ae02091fee16e4223681e8e4f omero-test-infra (v0.6.3-62-g40b2517) 2025-11-27 00:28:49,072 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-11-27 00:28:49,075 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2025-11-27 00:28:49,078 [ scc.git] DEBUG +00e02072dc29b04eba14c080ca8a0175a1499c15 omero-web-zarr (v0.1.1-10-g00e0207) 2025-11-27 00:28:49,080 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-11-27 00:28:49,083 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-11-27 00:28:49,086 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-11-27 00:28:49,091 [ scc.git] DEBUG +0c7356acacce8767f1317bc04057d5ddf059a2db scripts (v5.9.1-12-g0c7356a) 2025-11-27 00:28:49,093 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:28:49,093 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-11-27 00:28:49,095 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2025-11-27 00:28:49,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-11-27 00:28:49,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:28:50,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:28:50,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:28:51,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:28:51,251 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:28:51,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-11-27 00:28:51,321 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:28:51,323 [ scc.git] DEBUG Check current status 2025-11-27 00:28:51,323 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:28:51,325 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2025-11-27 00:28:51,325 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:28:51,362 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:28:51,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2025-11-27 00:28:52,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:28:52,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:28:53,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:28:53,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:28:53,545 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:28:53,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:28:53,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-11-27 00:28:53,583 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:28:53,585 [ scc.git] DEBUG Check current status 2025-11-27 00:28:53,585 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:28:53,587 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2025-11-27 00:28:53,587 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:28:53,625 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:28:54,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2025-11-27 00:28:54,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:28:54,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:28:55,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:28:55,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:28:55,780 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:28:55,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:28:55,819 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-11-27 00:28:55,819 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:28:55,821 [ scc.git] DEBUG Check current status 2025-11-27 00:28:55,821 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:28:55,823 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2025-11-27 00:28:55,823 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:28:55,862 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:28:56,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2025-11-27 00:28:56,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:28:57,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:28:57,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:28:58,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:28:58,122 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:28:58,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:28:58,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-11-27 00:28:58,160 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:28:58,162 [ scc.git] DEBUG Check current status 2025-11-27 00:28:58,162 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:28:58,165 [ scc.git] DEBUG 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0 2025-11-27 00:28:58,165 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:28:58,203 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:28:58,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2025-11-27 00:28:59,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:28:59,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:28:59,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:00,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:00,360 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:00,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:00,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-11-27 00:29:00,396 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:00,398 [ scc.git] DEBUG Check current status 2025-11-27 00:29:00,398 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:00,401 [ scc.git] DEBUG 691a9a60 Merge pull request #610 from will-moore/contributing_docs 2025-11-27 00:29:00,402 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:00,439 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:00,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2025-11-27 00:29:01,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:01,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:02,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:02,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:02,684 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:02,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:02,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-11-27 00:29:02,722 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:02,724 [ scc.git] DEBUG Check current status 2025-11-27 00:29:02,724 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:02,726 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2025-11-27 00:29:02,727 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:02,763 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:03,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2025-11-27 00:29:03,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:04,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:04,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:04,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:04,972 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:05,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:05,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-11-27 00:29:05,011 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:05,013 [ scc.git] DEBUG Check current status 2025-11-27 00:29:05,013 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:05,015 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2025-11-27 00:29:05,015 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:05,054 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:05,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2025-11-27 00:29:05,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:06,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:06,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:07,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:07,276 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:07,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:07,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-11-27 00:29:07,315 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:07,317 [ scc.git] DEBUG Check current status 2025-11-27 00:29:07,317 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:07,319 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action 2025-11-27 00:29:07,320 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:07,358 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:07,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2025-11-27 00:29:08,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:08,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:09,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:09,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:09,665 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:09,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:09,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-11-27 00:29:09,702 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:09,704 [ scc.git] DEBUG Check current status 2025-11-27 00:29:09,704 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:09,706 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2025-11-27 00:29:09,707 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:09,744 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:10,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2025-11-27 00:29:10,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:11,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:11,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:11,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:11,960 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:11,997 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:11,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-11-27 00:29:11,998 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:12,000 [ scc.git] DEBUG Check current status 2025-11-27 00:29:12,000 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:12,002 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-11-27 00:29:12,003 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:12,041 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:12,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2025-11-27 00:29:13,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:13,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:13,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:14,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:14,392 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:14,429 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:14,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-11-27 00:29:14,430 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:14,432 [ scc.git] DEBUG Check current status 2025-11-27 00:29:14,432 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:14,434 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2025-11-27 00:29:14,434 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:14,472 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:14,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2025-11-27 00:29:15,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:15,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:16,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:16,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:16,733 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:16,771 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:16,771 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-11-27 00:29:16,771 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:16,773 [ scc.git] DEBUG Check current status 2025-11-27 00:29:16,773 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:16,775 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2025-11-27 00:29:16,775 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:16,814 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:17,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2025-11-27 00:29:17,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:18,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:18,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:19,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:19,211 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:19,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:19,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-11-27 00:29:19,249 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:19,251 [ scc.git] DEBUG Check current status 2025-11-27 00:29:19,251 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:19,253 [ scc.git] DEBUG bdfeb5e bump sphinx version 2025-11-27 00:29:19,253 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:19,291 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:19,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2025-11-27 00:29:20,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:20,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:21,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:21,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:21,536 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:21,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:21,574 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-11-27 00:29:21,574 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:21,575 [ scc.git] DEBUG Check current status 2025-11-27 00:29:21,575 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:21,578 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2025-11-27 00:29:21,578 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:21,615 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:22,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2025-11-27 00:29:22,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:23,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:23,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:23,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:23,854 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:23,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:23,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-11-27 00:29:23,893 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:23,895 [ scc.git] DEBUG Check current status 2025-11-27 00:29:23,895 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:23,897 [ scc.git] DEBUG 40b2517 Merge pull request #81 from erickmartins/set-ulimits 2025-11-27 00:29:23,897 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:23,934 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:24,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-11-27 00:29:24,270 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-11-27 00:29:24,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2025-11-27 00:29:25,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:25,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:25,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:26,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:26,306 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:26,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:26,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-11-27 00:29:26,345 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:26,347 [ scc.git] DEBUG Check current status 2025-11-27 00:29:26,347 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:26,349 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2025-11-27 00:29:26,349 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:26,386 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:26,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2025-11-27 00:29:27,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:27,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:28,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:28,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:28,646 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:28,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:28,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-11-27 00:29:28,683 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:28,684 [ scc.git] DEBUG Check current status 2025-11-27 00:29:28,684 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:28,686 [ scc.git] DEBUG 160d894 Fix display of code 2025-11-27 00:29:28,687 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:28,724 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:29,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2025-11-27 00:29:29,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:30,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:30,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:30,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:30,974 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:31,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:31,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-11-27 00:29:31,012 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:31,014 [ scc.git] DEBUG Check current status 2025-11-27 00:29:31,014 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:31,016 [ scc.git] DEBUG 00e0207 Merge pull request #20 from will-moore/zarr_python_v3 2025-11-27 00:29:31,016 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:31,053 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:31,053 [ scc.git] DEBUG Repository configuration: base-branch: main 2025-11-27 00:29:31,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2025-11-27 00:29:32,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:32,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:33,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:33,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:33,522 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:33,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:33,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-11-27 00:29:33,558 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:33,560 [ scc.git] DEBUG Check current status 2025-11-27 00:29:33,560 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:33,562 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2025-11-27 00:29:33,563 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:33,600 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:33,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-11-27 00:29:33,947 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-11-27 00:29:34,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2025-11-27 00:29:34,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:35,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:35,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:36,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:36,047 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:36,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:36,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-11-27 00:29:36,085 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:36,087 [ scc.git] DEBUG Check current status 2025-11-27 00:29:36,087 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:36,089 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2025-11-27 00:29:36,089 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:36,127 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:36,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-11-27 00:29:36,475 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-11-27 00:29:36,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2025-11-27 00:29:37,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:37,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:38,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:38,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:38,494 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:38,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:38,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-11-27 00:29:38,532 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:38,534 [ scc.git] DEBUG Check current status 2025-11-27 00:29:38,534 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:38,536 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-11-27 00:29:38,536 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:38,572 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:39,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2025-11-27 00:29:39,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:40,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:40,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:40,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:40,873 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:40,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:40,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-11-27 00:29:40,909 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-27 00:29:40,911 [ scc.git] DEBUG Check current status 2025-11-27 00:29:40,911 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:40,913 [ scc.git] DEBUG 0c7356a Merge pull request #223 from will-moore/batch_roi_export_big_images 2025-11-27 00:29:40,913 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:40,951 [ scc.config] DEBUG Found remote.origin.url 2025-11-27 00:29:40,952 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-11-27 00:29:41,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-11-27 00:29:41,312 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-11-27 00:29:41,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2025-11-27 00:29:42,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-27 00:29:42,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-27 00:29:42,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-27 00:29:43,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-27 00:29:43,282 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:43,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:43,318 [ scc.git] DEBUG Resetting... 2025-11-27 00:29:43,318 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-11-27 00:29:43,324 [ scc.git] DEBUG HEAD is now at d48e246 merge master -Dorg -Snone 2025-11-27 00:29:43,324 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-11-27 00:29:43,379 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2025-11-27 00:29:43,403 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-11-27 00:29:43,423 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-11-27 00:29:43,437 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-11-27 00:29:43,457 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2025-11-27 00:29:43,470 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2025-11-27 00:29:43,480 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-11-27 00:29:43,504 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-11-27 00:29:43,506 [ scc.git] DEBUG Check current status 2025-11-27 00:29:43,506 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-27 00:29:43,509 [ scc.git] DEBUG d48e246 merge master -Dorg -Snone 2025-11-27 00:29:43,509 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-27 00:29:43,551 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-11-27 00:29:43,554 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-11-27 00:29:43,557 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-11-27 00:29:43,560 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-11-27 00:29:43,564 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2025-11-27 00:29:43,567 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-11-27 00:29:43,570 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-11-27 00:29:43,573 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2025-11-27 00:29:43,576 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-11-27 00:29:43,579 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-11-27 00:29:43,582 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-11-27 00:29:43,584 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-11-27 00:29:43,587 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-11-27 00:29:43,590 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-11-27 00:29:43,593 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-11-27 00:29:43,596 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-11-27 00:29:43,598 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-11-27 00:29:43,601 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-11-27 00:29:43,603 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-11-27 00:29:43,606 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-11-27 00:29:43,608 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-11-27 00:29:43,612 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-11-27 00:29:43,612 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-11-27 00:29:43,613 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-11-27 00:29:43,613 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-11-27 00:29:43,613 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-11-27 00:29:43,613 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-11-27 00:29:43,613 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-11-27 00:29:43,613 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:29:43,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-11-27 00:29:44,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-11-27 00:29:44,345 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:29:44,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-11-27 00:29:45,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:29:45,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-11-27 00:29:46,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:29:46,392 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-11-27 00:29:46,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-11-27 00:29:46,892 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:29:47,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-11-27 00:29:48,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:29:48,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-11-27 00:29:49,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:29:49,034 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-11-27 00:29:49,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-11-27 00:29:49,526 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:29:50,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-11-27 00:29:50,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:29:51,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-11-27 00:29:51,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:29:51,705 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-11-27 00:29:51,705 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:29:51,705 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:29:51,705 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:29:51,708 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:29:51,710 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:29:51,710 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:29:51,712 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:29:51,715 [ scc.git] DEBUG Already up to date. 2025-11-27 00:29:51,715 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-11-27 00:29:52,008 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-11-27 00:29:52,008 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-11-27 00:29:52,014 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-11-27 00:29:52,273 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-11-27 00:29:52,274 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-11-27 00:29:52,280 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-11-27 00:29:52,536 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-11-27 00:29:52,536 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-11-27 00:29:52,542 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:29:52,542 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:29:52,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:29:52,545 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-11-27 00:29:52,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:29:52,549 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-11-27 00:29:52,551 [ scc.git] DEBUG Already up to date. 2025-11-27 00:29:52,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:29:52,711 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-11-27 00:29:52,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:29:52,715 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-11-27 00:29:52,717 [ scc.git] DEBUG Already up to date. 2025-11-27 00:29:53,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:29:53,146 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-11-27 00:29:53,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:29:53,151 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-11-27 00:29:53,153 [ scc.git] DEBUG Already up to date. 2025-11-27 00:29:53,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:29:53,548 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:29:53,597 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:29:53,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:29:53,599 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:29:53,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2025-11-27 00:29:53,974 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:29:53,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-11-27 00:29:53,974 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:29:53,974 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:29:53,977 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:29:53,979 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:29:53,979 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:29:53,981 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:29:53,984 [ scc.git] DEBUG Already up to date. 2025-11-27 00:29:53,984 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:29:53,984 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:29:53,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:29:53,986 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:29:54,023 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:29:54,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:29:54,025 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:54,059 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:29:54,062 [ scc.git] DEBUG has no local changes 2025-11-27 00:29:54,062 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:29:54,068 [ scc.git] DEBUG [detached HEAD 0a60b91] merge master -Dorg -Ssuccess-only 2025-11-27 00:29:54,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:54,068 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:29:54,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2025-11-27 00:29:55,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2025-11-27 00:29:55,069 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:29:55,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-11-27 00:29:56,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:29:56,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:29:57,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-11-27 00:29:57,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:29:57,603 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:29:58,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2025-11-27 00:29:58,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2025-11-27 00:29:58,550 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:29:58,550 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-11-27 00:29:58,550 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:29:58,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:29:58,553 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:29:58,555 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:29:58,555 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:29:58,558 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:29:58,560 [ scc.git] DEBUG Already up to date. 2025-11-27 00:29:58,560 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2025-11-27 00:29:58,833 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2025-11-27 00:29:58,833 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2025-11-27 00:29:58,837 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:29:58,837 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:29:58,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:29:58,839 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-11-27 00:29:58,842 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:29:58,844 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-11-27 00:29:58,850 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:29:58,852 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-27 00:29:58,852 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-27 00:29:59,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:29:59,009 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:29:59,046 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:29:59,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:29:59,048 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:29:59,084 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:29:59,087 [ scc.git] DEBUG has no local changes 2025-11-27 00:29:59,087 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:29:59,092 [ scc.git] DEBUG [detached HEAD afa2255] merge master -Dorg -Ssuccess-only 2025-11-27 00:29:59,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:29:59,092 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:29:59,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2025-11-27 00:30:00,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/73 HTTP/1.1" 200 None 2025-11-27 00:30:00,111 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:30:00,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None 2025-11-27 00:30:01,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:30:01,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:30:02,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None 2025-11-27 00:30:02,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/d230161123b7bbfcb9363e02bbe289367c532cdc?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:30:02,706 [ scc.repo] DEBUG - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:30:03,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None 2025-11-27 00:30:04,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-11-27 00:30:04,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:30:05,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-11-27 00:30:05,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:30:05,458 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names' 2025-11-27 00:30:05,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None 2025-11-27 00:30:06,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None 2025-11-27 00:30:06,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-11-27 00:30:07,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:30:07,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:30:08,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-11-27 00:30:08,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:30:08,742 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands' 2025-11-27 00:30:09,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2025-11-27 00:30:09,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2025-11-27 00:30:10,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-11-27 00:30:10,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:30:11,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:30:11,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-11-27 00:30:12,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:30:12,108 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2025-11-27 00:30:12,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2025-11-27 00:30:13,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2025-11-27 00:30:13,272 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:30:13,272 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-11-27 00:30:13,272 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:30:13,272 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:30:13,275 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:30:13,277 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:30:13,277 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:30:13,280 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:30:13,282 [ scc.git] DEBUG Already up to date. 2025-11-27 00:30:13,283 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2025-11-27 00:30:13,546 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-11-27 00:30:13,546 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2025-11-27 00:30:13,550 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-11-27 00:30:13,803 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-11-27 00:30:13,803 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-11-27 00:30:13,806 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head' 2025-11-27 00:30:14,059 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-11-27 00:30:14,059 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD 2025-11-27 00:30:14,063 [ scc.git] DEBUG Calling 'git fetch origin pull/73/head' 2025-11-27 00:30:14,324 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-11-27 00:30:14,324 [ scc.git] DEBUG * branch refs/pull/73/head -> FETCH_HEAD 2025-11-27 00:30:14,327 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:30:14,328 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:30:14,328 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:30:14,330 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2025-11-27 00:30:14,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:30:14,335 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2025-11-27 00:30:14,342 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:30:14,345 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2025-11-27 00:30:14,345 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2025-11-27 00:30:14,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:30:14,494 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-11-27 00:30:14,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:30:14,499 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-11-27 00:30:14,507 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-11-27 00:30:14,508 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:30:14,511 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++-------- 2025-11-27 00:30:14,511 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-) 2025-11-27 00:30:14,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:30:14,905 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-11-27 00:30:14,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:30:14,911 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-11-27 00:30:14,918 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-11-27 00:30:14,919 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:30:14,922 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++------- 2025-11-27 00:30:14,922 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-) 2025-11-27 00:30:15,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:30:15,304 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d230161123b7bbfcb9363e02bbe289367c532cdc' 2025-11-27 00:30:15,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:30:15,310 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 73 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) d230161123b7bbfcb9363e02bbe289367c532cdc' 2025-11-27 00:30:15,318 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:30:15,321 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-27 00:30:15,321 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-27 00:30:15,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:30:15,710 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:30:15,748 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:30:15,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:30:15,750 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:30:15,784 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:30:15,787 [ scc.git] DEBUG has no local changes 2025-11-27 00:30:15,787 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:30:15,793 [ scc.git] DEBUG [detached HEAD 5649e4e] merge master -Dorg -Ssuccess-only 2025-11-27 00:30:15,793 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:30:15,793 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:30:16,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2025-11-27 00:30:16,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2025-11-27 00:30:17,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2025-11-27 00:30:17,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2025-11-27 00:30:18,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:30:18,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:30:19,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2025-11-27 00:30:19,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2025-11-27 00:30:20,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2025-11-27 00:30:20,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2025-11-27 00:30:20,728 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2025-11-27 00:30:21,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2025-11-27 00:30:21,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2025-11-27 00:30:22,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-11-27 00:30:22,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:30:23,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:30:23,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-11-27 00:30:24,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b1ec9c408dd417886a980e3368c0d82bfefe491d?per_page=1 HTTP/1.1" 200 None 2025-11-27 00:30:24,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-11-27 00:30:25,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/status HTTP/1.1" 200 None 2025-11-27 00:30:25,034 [ scc.repo] DEBUG - PR 181 will-moore 'Add labels support for import' 2025-11-27 00:30:25,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2025-11-27 00:30:26,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2025-11-27 00:30:26,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-11-27 00:30:27,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:30:27,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:30:28,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-11-27 00:30:28,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2025-11-27 00:30:29,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-11-27 00:30:29,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2025-11-27 00:30:29,572 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-11-27 00:30:30,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2025-11-27 00:30:30,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2025-11-27 00:30:31,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-11-27 00:30:31,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:30:32,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:30:32,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-11-27 00:30:33,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2025-11-27 00:30:33,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-11-27 00:30:34,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2025-11-27 00:30:34,077 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2025-11-27 00:30:34,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2025-11-27 00:30:35,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2025-11-27 00:30:35,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f HTTP/1.1" 200 None 2025-11-27 00:30:36,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:30:36,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:30:37,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2025-11-27 00:30:37,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2025-11-27 00:30:38,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2025-11-27 00:30:38,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2025-11-27 00:30:39,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2025-11-27 00:30:39,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2025-11-27 00:30:40,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2025-11-27 00:30:40,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2025-11-27 00:30:41,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2025-11-27 00:30:41,122 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:30:41,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-11-27 00:30:41,122 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:30:41,122 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:30:41,124 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:30:41,127 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:30:41,127 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:30:41,130 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:30:41,143 [ scc.git] DEBUG Updating 11d3587..37ea700 2025-11-27 00:30:41,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2025-11-27 00:30:42,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2025-11-27 00:30:43,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2025-11-27 00:30:43,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2025-11-27 00:30:44,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2025-11-27 00:30:45,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2025-11-27 00:30:45,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2025-11-27 00:30:46,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2025-11-27 00:30:46,601 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2025-11-27 00:30:46,877 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-11-27 00:30:46,877 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2025-11-27 00:30:46,881 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2025-11-27 00:30:47,141 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-11-27 00:30:47,141 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2025-11-27 00:30:47,145 [ scc.git] DEBUG Calling 'git fetch origin pull/181/head' 2025-11-27 00:30:47,403 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-11-27 00:30:47,403 [ scc.git] DEBUG * branch refs/pull/181/head -> FETCH_HEAD 2025-11-27 00:30:47,406 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2025-11-27 00:30:47,670 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-11-27 00:30:47,670 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2025-11-27 00:30:47,674 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:30:47,674 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:30:47,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:30:47,677 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2025-11-27 00:30:47,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:30:47,683 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2025-11-27 00:30:47,692 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:30:47,696 [ scc.git] DEBUG README.rst | 14 ++ 2025-11-27 00:30:47,696 [ scc.git] DEBUG src/omero_zarr/cli.py | 66 +++++---- 2025-11-27 00:30:47,696 [ scc.git] DEBUG src/omero_zarr/kvp_tables.py | 82 +++++++++++ 2025-11-27 00:30:47,696 [ scc.git] DEBUG src/omero_zarr/masks.py | 46 ++++-- 2025-11-27 00:30:47,696 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 51 +++++-- 2025-11-27 00:30:47,696 [ scc.git] DEBUG src/omero_zarr/util.py | 49 ++++++- 2025-11-27 00:30:47,696 [ scc.git] DEBUG test/integration/clitest/test_export.py | 251 +++++++++++++++++++++++--------- 2025-11-27 00:30:47,696 [ scc.git] DEBUG 7 files changed, 443 insertions(+), 116 deletions(-) 2025-11-27 00:30:47,696 [ scc.git] DEBUG create mode 100644 src/omero_zarr/kvp_tables.py 2025-11-27 00:30:47,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:30:47,863 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-11-27 00:30:47,867 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:30:47,869 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-11-27 00:30:47,878 [ scc.git] DEBUG Auto-merging CHANGELOG.md 2025-11-27 00:30:47,879 [ scc.git] DEBUG CONFLICT (content): Merge conflict in CHANGELOG.md 2025-11-27 00:30:47,879 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-11-27 00:30:47,879 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2025-11-27 00:30:47,879 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2025-11-27 00:30:47,879 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2025-11-27 00:30:47,879 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-27 00:30:47,879 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-27 00:30:47,882 [ scc.git] DEBUG Calling 'git reset --hard 03f880ef0a7128289d0d5e0952b6d352db0afca5' 2025-11-27 00:30:47,886 [ scc.git] DEBUG HEAD is now at 03f880e merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) 2025-11-27 00:30:48,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:30:48,280 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-11-27 00:30:48,283 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-11-27 00:30:48,285 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#585](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - CHANGELOG.md --conflicts 2025-11-27 00:30:48,287 [ scc.config] DEBUG Found github.token 2025-11-27 00:30:48,287 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2025-11-27 00:30:48,287 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b1ec9c408dd417886a980e3368c0d82bfefe491d' 2025-11-27 00:30:48,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:30:48,293 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) b1ec9c408dd417886a980e3368c0d82bfefe491d' 2025-11-27 00:30:48,301 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-11-27 00:30:48,302 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:30:48,305 [ scc.git] DEBUG src/omero_zarr/cli.py | 4 + 2025-11-27 00:30:48,305 [ scc.git] DEBUG src/omero_zarr/import_labels.py | 196 ++++++++++++++++++++++++++++++++ 2025-11-27 00:30:48,305 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 7 ++ 2025-11-27 00:30:48,305 [ scc.git] DEBUG test/integration/clitest/test_import.py | 19 ++++ 2025-11-27 00:30:48,305 [ scc.git] DEBUG 4 files changed, 226 insertions(+) 2025-11-27 00:30:48,306 [ scc.git] DEBUG create mode 100644 src/omero_zarr/import_labels.py 2025-11-27 00:30:48,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:30:48,687 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2025-11-27 00:30:48,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:30:48,692 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2025-11-27 00:30:48,702 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-11-27 00:30:48,702 [ scc.git] DEBUG Auto-merging src/omero_zarr/import_labels.py 2025-11-27 00:30:48,702 [ scc.git] DEBUG CONFLICT (add/add): Merge conflict in src/omero_zarr/import_labels.py 2025-11-27 00:30:48,702 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2025-11-27 00:30:48,702 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-27 00:30:48,702 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-27 00:30:48,705 [ scc.git] DEBUG Calling 'git reset --hard 70a93b58218051647f99bf298c67023f4e9f2753' 2025-11-27 00:30:48,708 [ scc.git] DEBUG HEAD is now at 70a93b5 merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) 2025-11-27 00:30:49,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:30:49,107 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2025-11-27 00:30:49,110 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-11-27 00:30:49,112 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#585](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/consoleText) for more details. Possible conflicts: - PR #181 will-moore 'Add labels support for import' - src/omero_zarr/import_labels.py --conflicts 2025-11-27 00:30:49,114 [ scc.config] DEBUG Found github.token 2025-11-27 00:30:49,114 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2025-11-27 00:30:49,114 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:30:49,150 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:30:49,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:30:49,153 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:30:49,188 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:30:49,192 [ scc.git] DEBUG has no local changes 2025-11-27 00:30:49,192 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 174 will-moore 'Skip wells' - PR 181 will-moore 'Add labels support for import' Conflicting PRs (not included): - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:30:49,197 [ scc.git] DEBUG [detached HEAD 5d6d849] merge master -Dorg -Ssuccess-only 2025-11-27 00:30:49,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:30:49,198 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:30:49,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2025-11-27 00:30:50,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/647 HTTP/1.1" 200 None 2025-11-27 00:30:50,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643 HTTP/1.1" 200 None 2025-11-27 00:30:51,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643/comments HTTP/1.1" 200 None 2025-11-27 00:30:51,211 [ scc.repo] DEBUG # ... Include label: include 2025-11-27 00:30:51,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c1ef89b420677b483d223fc7ec13c116e9f0c5f5 HTTP/1.1" 200 None 2025-11-27 00:30:52,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c1ef89b420677b483d223fc7ec13c116e9f0c5f5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:30:52,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c1ef89b420677b483d223fc7ec13c116e9f0c5f5 HTTP/1.1" 200 None 2025-11-27 00:30:53,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c1ef89b420677b483d223fc7ec13c116e9f0c5f5?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:30:53,279 [ scc.repo] DEBUG - PR 643 Rdornier 'Shape scaling' 2025-11-27 00:30:53,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2025-11-27 00:30:54,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2025-11-27 00:30:54,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None 2025-11-27 00:30:55,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None 2025-11-27 00:30:55,346 [ scc.repo] DEBUG # ... Include label: include 2025-11-27 00:30:55,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8a77378453ff0c94e6a83bd3146342654333f5e0 HTTP/1.1" 200 None 2025-11-27 00:30:56,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8a77378453ff0c94e6a83bd3146342654333f5e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:30:56,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8a77378453ff0c94e6a83bd3146342654333f5e0 HTTP/1.1" 200 None 2025-11-27 00:30:57,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8a77378453ff0c94e6a83bd3146342654333f5e0?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:30:57,444 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position' 2025-11-27 00:30:57,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None 2025-11-27 00:30:58,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2025-11-27 00:30:58,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2025-11-27 00:30:59,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/600/comments?page=2 HTTP/1.1" 200 None 2025-11-27 00:30:59,445 [ scc.repo] DEBUG # ... Include label: include 2025-11-27 00:31:00,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d9eeab01dd247af3abeaa39f2f60ee65fcb35ddb HTTP/1.1" 200 None 2025-11-27 00:31:00,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d9eeab01dd247af3abeaa39f2f60ee65fcb35ddb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:31:01,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d9eeab01dd247af3abeaa39f2f60ee65fcb35ddb HTTP/1.1" 200 None 2025-11-27 00:31:01,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d9eeab01dd247af3abeaa39f2f60ee65fcb35ddb?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:31:01,659 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois' 2025-11-27 00:31:01,659 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:31:01,659 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-11-27 00:31:01,660 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:31:01,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:01,662 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:31:01,666 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:31:01,666 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:31:01,670 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:31:01,694 [ scc.git] DEBUG Updating 9cc36cde..691a9a60 2025-11-27 00:31:02,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2025-11-27 00:31:02,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2025-11-27 00:31:03,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2025-11-27 00:31:04,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2025-11-27 00:31:04,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2025-11-27 00:31:05,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2025-11-27 00:31:06,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2025-11-27 00:31:07,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2025-11-27 00:31:07,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2025-11-27 00:31:08,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2025-11-27 00:31:09,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2025-11-27 00:31:09,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2025-11-27 00:31:09,663 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2025-11-27 00:31:09,957 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-11-27 00:31:09,957 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2025-11-27 00:31:09,962 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head' 2025-11-27 00:31:10,232 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-11-27 00:31:10,232 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD 2025-11-27 00:31:10,236 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head' 2025-11-27 00:31:10,498 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-11-27 00:31:10,498 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD 2025-11-27 00:31:10,502 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:31:10,503 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:31:10,503 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:10,504 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9eeab01dd247af3abeaa39f2f60ee65fcb35ddb' 2025-11-27 00:31:10,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:10,514 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) d9eeab01dd247af3abeaa39f2f60ee65fcb35ddb' 2025-11-27 00:31:10,533 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:31:10,542 [ scc.git] DEBUG .gitignore | 2 + 2025-11-27 00:31:10,542 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 347 ++++++++- 2025-11-27 00:31:10,542 [ scc.git] DEBUG src/css/figure.css | 18 +- 2025-11-27 00:31:10,542 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes 2025-11-27 00:31:10,543 [ scc.git] DEBUG src/index.html | 44 +- 2025-11-27 00:31:10,543 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +- 2025-11-27 00:31:10,543 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +- 2025-11-27 00:31:10,543 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 213 +++++- 2025-11-27 00:31:10,543 [ scc.git] DEBUG src/js/shape_editor/line.js | 220 +++++- 2025-11-27 00:31:10,543 [ scc.git] DEBUG src/js/shape_editor/point.js | 208 +++++- 2025-11-27 00:31:10,543 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 212 +++++- 2025-11-27 00:31:10,543 [ scc.git] DEBUG src/js/shape_editor/rect.js | 217 +++++- 2025-11-27 00:31:10,543 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 427 ++++++++++- 2025-11-27 00:31:10,544 [ scc.git] DEBUG src/js/shape_editor/text.js | 812 +++++++++++++++++++++ 2025-11-27 00:31:10,544 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2025-11-27 00:31:10,544 [ scc.git] DEBUG src/js/views/right_panel_view.js | 125 +++- 2025-11-27 00:31:10,544 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +- 2025-11-27 00:31:10,544 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 200 ++++- 2025-11-27 00:31:10,544 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +- 2025-11-27 00:31:10,544 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +- 2025-11-27 00:31:10,544 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++ 2025-11-27 00:31:10,544 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 +++++++--- 2025-11-27 00:31:10,544 [ scc.git] DEBUG 22 files changed, 3441 insertions(+), 235 deletions(-) 2025-11-27 00:31:10,544 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png 2025-11-27 00:31:10,544 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js 2025-11-27 00:31:10,544 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html 2025-11-27 00:31:10,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:31:10,691 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8a77378453ff0c94e6a83bd3146342654333f5e0' 2025-11-27 00:31:10,698 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:10,700 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) 8a77378453ff0c94e6a83bd3146342654333f5e0' 2025-11-27 00:31:10,727 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-11-27 00:31:10,727 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-11-27 00:31:10,728 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-11-27 00:31:10,728 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html 2025-11-27 00:31:10,728 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html 2025-11-27 00:31:10,728 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-27 00:31:10,728 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-27 00:31:10,734 [ scc.git] DEBUG Calling 'git reset --hard 94a24bbe9fcaa2f9724a21274df3c1e8138d1f01' 2025-11-27 00:31:10,744 [ scc.git] DEBUG HEAD is now at 94a24bbe merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 2025-11-27 00:31:11,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:31:11,091 [ scc.git] DEBUG Calling 'git merge-base 691a9a60c01bcce1f01f90d528584cb6e68124f9 8a77378453ff0c94e6a83bd3146342654333f5e0' 2025-11-27 00:31:11,096 [ scc.git] DEBUG Calling 'git diff --name-only 691a9a60c01bcce1f01f90d528584cb6e68124f9..691a9a60c01bcce1f01f90d528584cb6e68124f9' 2025-11-27 00:31:11,099 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position' Conflicting PR. Removed from build [OMERO-plugins-push#585](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/templates/scalebar_form.template.html --conflicts 2025-11-27 00:31:11,101 [ scc.config] DEBUG Found github.token 2025-11-27 00:31:11,101 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts. 2025-11-27 00:31:11,102 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c1ef89b420677b483d223fc7ec13c116e9f0c5f5' 2025-11-27 00:31:11,109 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:11,111 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Shape scaling) c1ef89b420677b483d223fc7ec13c116e9f0c5f5' 2025-11-27 00:31:11,133 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2025-11-27 00:31:11,133 [ scc.git] DEBUG Auto-merging src/js/shape_editor/line.js 2025-11-27 00:31:11,133 [ scc.git] DEBUG Auto-merging src/js/shape_editor/point.js 2025-11-27 00:31:11,133 [ scc.git] DEBUG Auto-merging src/js/shape_editor/polygon.js 2025-11-27 00:31:11,133 [ scc.git] DEBUG Auto-merging src/js/shape_editor/rect.js 2025-11-27 00:31:11,133 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/rect.js 2025-11-27 00:31:11,133 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2025-11-27 00:31:11,133 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/shape_manager.js 2025-11-27 00:31:11,133 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2025-11-27 00:31:11,133 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-27 00:31:11,134 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-27 00:31:11,137 [ scc.git] DEBUG Calling 'git reset --hard 94a24bbe9fcaa2f9724a21274df3c1e8138d1f01' 2025-11-27 00:31:11,142 [ scc.git] DEBUG HEAD is now at 94a24bbe merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 2025-11-27 00:31:11,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:31:11,511 [ scc.git] DEBUG Calling 'git merge-base 691a9a60c01bcce1f01f90d528584cb6e68124f9 c1ef89b420677b483d223fc7ec13c116e9f0c5f5' 2025-11-27 00:31:11,515 [ scc.git] DEBUG Calling 'git diff --name-only 691a9a60c01bcce1f01f90d528584cb6e68124f9..691a9a60c01bcce1f01f90d528584cb6e68124f9' 2025-11-27 00:31:11,518 [ scc.git] INFO - PR 643 Rdornier 'Shape scaling' Conflicting PR. Removed from build [OMERO-plugins-push#585](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/shape_editor/shape_manager.js - src/js/shape_editor/rect.js --conflicts 2025-11-27 00:31:11,520 [ scc.config] DEBUG Found github.token 2025-11-27 00:31:11,520 [ scc.git] DEBUG Not adding comment to issue #643, already --conflicts. 2025-11-27 00:31:11,520 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:31:11,557 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:31:11,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:11,559 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:31:11,595 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:31:11,600 [ scc.git] DEBUG has no local changes 2025-11-27 00:31:11,600 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' (user: Rdornier) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) Updating 9cc36cde..691a9a60 Previously merged: - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' Conflicting PRs (not included): - PR 637 Rdornier 'Fix scalebar position' - PR 643 Rdornier 'Shape scaling' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:31:11,608 [ scc.git] DEBUG [detached HEAD ce84a14f] merge master -Dorg -Ssuccess-only 2025-11-27 00:31:11,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:31:11,608 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:31:12,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2025-11-27 00:31:12,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2025-11-27 00:31:12,567 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:31:13,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-11-27 00:31:13,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:31:14,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:31:14,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-11-27 00:31:14,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:31:14,997 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:31:15,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2025-11-27 00:31:15,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2025-11-27 00:31:16,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-11-27 00:31:17,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:31:17,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-11-27 00:31:18,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:31:18,015 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2025-11-27 00:31:18,015 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:31:18,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-11-27 00:31:18,015 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:31:18,015 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:18,017 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:31:18,020 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:31:18,020 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:31:18,022 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:31:18,026 [ scc.git] DEBUG Already up to date. 2025-11-27 00:31:18,026 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2025-11-27 00:31:18,294 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-11-27 00:31:18,294 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2025-11-27 00:31:18,298 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2025-11-27 00:31:18,551 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-11-27 00:31:18,551 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2025-11-27 00:31:18,555 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:31:18,555 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:31:18,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:18,557 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-11-27 00:31:18,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:18,562 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-11-27 00:31:18,569 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2025-11-27 00:31:18,569 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:31:18,572 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2025-11-27 00:31:18,572 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-11-27 00:31:18,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:31:18,730 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-11-27 00:31:18,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:18,735 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-11-27 00:31:18,742 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:31:18,745 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-27 00:31:18,745 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-27 00:31:19,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:31:19,162 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:31:19,199 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:31:19,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:19,201 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:31:19,237 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:31:19,239 [ scc.git] DEBUG has no local changes 2025-11-27 00:31:19,239 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:31:19,245 [ scc.git] DEBUG [detached HEAD 475d73a] merge master -Dorg -Ssuccess-only 2025-11-27 00:31:19,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:31:19,245 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:31:19,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2025-11-27 00:31:20,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2025-11-27 00:31:20,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2025-11-27 00:31:21,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2025-11-27 00:31:21,165 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:31:21,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-11-27 00:31:22,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:31:22,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:31:23,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-11-27 00:31:23,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:31:23,819 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-11-27 00:31:24,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2025-11-27 00:31:24,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2025-11-27 00:31:25,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2025-11-27 00:31:25,309 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:31:25,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-11-27 00:31:26,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:31:26,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:31:27,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-11-27 00:31:28,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:31:28,091 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-11-27 00:31:28,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2025-11-27 00:31:28,577 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:31:29,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-11-27 00:31:29,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:31:30,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:31:30,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-11-27 00:31:31,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:31:31,148 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-11-27 00:31:31,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2025-11-27 00:31:31,614 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:31:32,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-11-27 00:31:32,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:31:33,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:31:33,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-11-27 00:31:34,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:31:34,317 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-11-27 00:31:34,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2025-11-27 00:31:35,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2025-11-27 00:31:35,245 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:31:35,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-11-27 00:31:36,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:31:36,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:31:37,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-11-27 00:31:37,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:31:37,812 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-11-27 00:31:38,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2025-11-27 00:31:38,319 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:31:38,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-11-27 00:31:39,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:31:39,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:31:40,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-11-27 00:31:40,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:31:40,891 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-11-27 00:31:41,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2025-11-27 00:31:41,376 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:31:41,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-11-27 00:31:42,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:31:42,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:31:43,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-11-27 00:31:43,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:31:43,894 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-11-27 00:31:43,894 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:31:43,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-11-27 00:31:43,895 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:31:43,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:43,897 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:31:43,899 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:31:43,899 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:31:43,902 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:31:43,905 [ scc.git] DEBUG Already up to date. 2025-11-27 00:31:43,905 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2025-11-27 00:31:44,180 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-11-27 00:31:44,180 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2025-11-27 00:31:44,185 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2025-11-27 00:31:44,437 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-11-27 00:31:44,437 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2025-11-27 00:31:44,441 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2025-11-27 00:31:44,691 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-11-27 00:31:44,691 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2025-11-27 00:31:44,695 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2025-11-27 00:31:44,963 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-11-27 00:31:44,963 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2025-11-27 00:31:44,967 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2025-11-27 00:31:45,216 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-11-27 00:31:45,216 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2025-11-27 00:31:45,220 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2025-11-27 00:31:45,479 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-11-27 00:31:45,480 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2025-11-27 00:31:45,484 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2025-11-27 00:31:45,737 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-11-27 00:31:45,737 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2025-11-27 00:31:45,740 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:31:45,740 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:31:45,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:45,743 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-11-27 00:31:45,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:45,747 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-11-27 00:31:45,755 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:31:45,759 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2025-11-27 00:31:45,760 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2025-11-27 00:31:45,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:31:45,920 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-11-27 00:31:45,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:45,925 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-11-27 00:31:45,940 [ scc.git] DEBUG Auto-merging package-lock.json 2025-11-27 00:31:45,941 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:31:45,945 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2025-11-27 00:31:45,945 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2025-11-27 00:31:46,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:31:46,336 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-11-27 00:31:46,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:46,341 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-11-27 00:31:46,356 [ scc.git] DEBUG Auto-merging package-lock.json 2025-11-27 00:31:46,356 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-11-27 00:31:46,356 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-27 00:31:46,356 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-27 00:31:46,359 [ scc.git] DEBUG Calling 'git reset --hard 7ba9593833cee1a0a2dc83239587acb0a2ac041d' 2025-11-27 00:31:46,363 [ scc.git] DEBUG HEAD is now at 7ba9593 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2025-11-27 00:31:46,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:31:46,773 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-11-27 00:31:46,775 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-11-27 00:31:46,778 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#585](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2025-11-27 00:31:46,780 [ scc.config] DEBUG Found github.token 2025-11-27 00:31:46,780 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2025-11-27 00:31:46,780 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-11-27 00:31:46,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:46,784 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-11-27 00:31:46,800 [ scc.git] DEBUG Auto-merging package-lock.json 2025-11-27 00:31:46,800 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:31:46,805 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2025-11-27 00:31:46,805 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2025-11-27 00:31:47,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:31:47,167 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-11-27 00:31:47,170 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:47,173 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-11-27 00:31:47,188 [ scc.git] DEBUG Auto-merging package-lock.json 2025-11-27 00:31:47,189 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:31:47,193 [ scc.git] DEBUG package-lock.json | 6 +++--- 2025-11-27 00:31:47,193 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2025-11-27 00:31:47,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:31:47,564 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-11-27 00:31:47,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:47,569 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-11-27 00:31:47,584 [ scc.git] DEBUG Auto-merging package-lock.json 2025-11-27 00:31:47,585 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-11-27 00:31:47,585 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-27 00:31:47,585 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-27 00:31:47,587 [ scc.git] DEBUG Calling 'git reset --hard 7c05f217abf11cc3cef91e4bd9e26a136e4ab051' 2025-11-27 00:31:47,592 [ scc.git] DEBUG HEAD is now at 7c05f21 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-11-27 00:31:47,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:31:47,957 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-11-27 00:31:47,960 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-11-27 00:31:47,962 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#585](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2025-11-27 00:31:47,964 [ scc.config] DEBUG Found github.token 2025-11-27 00:31:47,964 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2025-11-27 00:31:47,964 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-11-27 00:31:47,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:47,969 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-11-27 00:31:47,987 [ scc.git] DEBUG Auto-merging package-lock.json 2025-11-27 00:31:47,987 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-11-27 00:31:47,988 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-27 00:31:47,988 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-27 00:31:47,990 [ scc.git] DEBUG Calling 'git reset --hard 7c05f217abf11cc3cef91e4bd9e26a136e4ab051' 2025-11-27 00:31:47,994 [ scc.git] DEBUG HEAD is now at 7c05f21 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-11-27 00:31:48,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:31:48,391 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-11-27 00:31:48,394 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-11-27 00:31:48,396 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#585](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2025-11-27 00:31:48,398 [ scc.config] DEBUG Found github.token 2025-11-27 00:31:48,398 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2025-11-27 00:31:48,398 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:31:48,436 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:31:48,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:31:48,438 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:31:48,472 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:31:48,476 [ scc.git] DEBUG has no local changes 2025-11-27 00:31:48,476 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:31:48,481 [ scc.git] DEBUG [detached HEAD 4e3609f] merge master -Dorg -Ssuccess-only 2025-11-27 00:31:48,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:31:48,482 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:31:48,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2025-11-27 00:31:49,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2025-11-27 00:31:49,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2025-11-27 00:31:50,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2025-11-27 00:31:50,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2025-11-27 00:31:51,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2025-11-27 00:31:51,375 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:31:51,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-11-27 00:31:52,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:31:52,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:31:53,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-11-27 00:31:54,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:31:54,037 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-11-27 00:31:54,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2025-11-27 00:31:54,513 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:31:55,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-11-27 00:31:55,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:31:56,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:31:56,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-11-27 00:31:57,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:31:57,227 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-11-27 00:31:57,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2025-11-27 00:31:58,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2025-11-27 00:31:58,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2025-11-27 00:31:59,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2025-11-27 00:31:59,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-11-27 00:32:00,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:00,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-11-27 00:32:01,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:32:01,147 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2025-11-27 00:32:01,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2025-11-27 00:32:02,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2025-11-27 00:32:02,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-11-27 00:32:03,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:03,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-11-27 00:32:03,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:32:03,964 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2025-11-27 00:32:04,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2025-11-27 00:32:04,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2025-11-27 00:32:05,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-11-27 00:32:05,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:06,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-11-27 00:32:06,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:32:06,800 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2025-11-27 00:32:07,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2025-11-27 00:32:07,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2025-11-27 00:32:08,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2025-11-27 00:32:08,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:09,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:32:09,283 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:32:09,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-11-27 00:32:09,283 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:32:09,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:09,286 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:32:09,288 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:32:09,288 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:32:09,290 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:32:09,297 [ scc.git] DEBUG Updating 7a798ce..bb94cf8 2025-11-27 00:32:09,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2025-11-27 00:32:09,914 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-11-27 00:32:10,205 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-11-27 00:32:10,205 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-11-27 00:32:10,209 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2025-11-27 00:32:10,480 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-11-27 00:32:10,480 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2025-11-27 00:32:10,484 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2025-11-27 00:32:10,749 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-11-27 00:32:10,749 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2025-11-27 00:32:10,753 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2025-11-27 00:32:11,010 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-11-27 00:32:11,010 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2025-11-27 00:32:11,014 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2025-11-27 00:32:11,271 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-11-27 00:32:11,272 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2025-11-27 00:32:11,275 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:32:11,275 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:32:11,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:11,277 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-11-27 00:32:11,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:11,284 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-11-27 00:32:11,294 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2025-11-27 00:32:11,295 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2025-11-27 00:32:11,296 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:32:11,299 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2025-11-27 00:32:11,299 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2025-11-27 00:32:11,299 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2025-11-27 00:32:11,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:32:11,443 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2025-11-27 00:32:11,448 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:11,450 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2025-11-27 00:32:11,466 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2025-11-27 00:32:11,466 [ scc.git] DEBUG Auto-merging src/app/context.js 2025-11-27 00:32:11,466 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2025-11-27 00:32:11,466 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2025-11-27 00:32:11,466 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:32:11,470 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2025-11-27 00:32:11,470 [ scc.git] DEBUG src/app/context.js | 6 +- 2025-11-27 00:32:11,470 [ scc.git] DEBUG src/app/header.html | 5 + 2025-11-27 00:32:11,470 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2025-11-27 00:32:11,470 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2025-11-27 00:32:11,470 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2025-11-27 00:32:11,470 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2025-11-27 00:32:11,470 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2025-11-27 00:32:11,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:32:11,835 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2025-11-27 00:32:11,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:11,842 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2025-11-27 00:32:11,853 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2025-11-27 00:32:11,854 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:32:11,857 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2025-11-27 00:32:11,857 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2025-11-27 00:32:11,857 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2025-11-27 00:32:12,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:32:12,240 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-11-27 00:32:12,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:12,247 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-11-27 00:32:12,260 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:32:12,270 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2025-11-27 00:32:12,270 [ scc.git] DEBUG package.json | 2 +- 2025-11-27 00:32:12,270 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2025-11-27 00:32:12,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:32:12,805 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-11-27 00:32:12,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:12,811 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-11-27 00:32:12,847 [ scc.git] DEBUG Auto-merging package-lock.json 2025-11-27 00:32:12,847 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-11-27 00:32:12,847 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-27 00:32:12,848 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-27 00:32:12,850 [ scc.git] DEBUG Calling 'git reset --hard 30f6a16d7f2bc1807c364505ceb6b8f6740af81e' 2025-11-27 00:32:12,857 [ scc.git] DEBUG HEAD is now at 30f6a16 merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2025-11-27 00:32:13,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:32:13,198 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-11-27 00:32:13,201 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4' 2025-11-27 00:32:13,203 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#585](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2025-11-27 00:32:13,205 [ scc.config] DEBUG Found github.token 2025-11-27 00:32:13,205 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2025-11-27 00:32:13,205 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:32:13,242 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:32:13,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:13,244 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:32:13,279 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:32:13,285 [ scc.git] DEBUG has no local changes 2025-11-27 00:32:13,285 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:32:13,291 [ scc.git] DEBUG [detached HEAD bfee7c3] merge master -Dorg -Ssuccess-only 2025-11-27 00:32:13,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:32:13,292 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:32:13,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2025-11-27 00:32:14,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2025-11-27 00:32:14,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2025-11-27 00:32:14,732 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:32:15,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-11-27 00:32:15,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:16,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:32:16,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-11-27 00:32:17,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:32:17,348 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:32:17,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2025-11-27 00:32:18,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-11-27 00:32:18,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:19,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-11-27 00:32:19,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:32:19,742 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-11-27 00:32:20,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2025-11-27 00:32:20,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2025-11-27 00:32:21,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-11-27 00:32:21,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:22,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-11-27 00:32:22,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:32:22,574 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2025-11-27 00:32:22,575 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:32:22,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-11-27 00:32:22,575 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:32:22,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:22,577 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:32:22,579 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:32:22,579 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:32:22,582 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:32:22,585 [ scc.git] DEBUG Already up to date. 2025-11-27 00:32:22,585 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2025-11-27 00:32:22,862 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-11-27 00:32:22,862 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2025-11-27 00:32:22,866 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2025-11-27 00:32:23,120 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-11-27 00:32:23,120 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2025-11-27 00:32:23,124 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2025-11-27 00:32:23,373 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-11-27 00:32:23,373 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2025-11-27 00:32:23,377 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:32:23,377 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:32:23,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:23,379 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-11-27 00:32:23,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:23,385 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-11-27 00:32:23,392 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:32:23,395 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2025-11-27 00:32:23,395 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2025-11-27 00:32:23,395 [ scc.git] DEBUG requirements.txt | 2 +- 2025-11-27 00:32:23,395 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2025-11-27 00:32:23,395 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2025-11-27 00:32:23,395 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2025-11-27 00:32:23,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:32:23,552 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-11-27 00:32:23,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:23,557 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-11-27 00:32:23,564 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:32:23,566 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-27 00:32:23,566 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-27 00:32:23,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:32:23,968 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-11-27 00:32:23,971 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:23,973 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-11-27 00:32:23,980 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2025-11-27 00:32:23,980 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2025-11-27 00:32:23,981 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-27 00:32:23,981 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-27 00:32:23,983 [ scc.git] DEBUG Calling 'git reset --hard 3d715f4a5a69121bfe24dfcc1c56ae35a87a835c' 2025-11-27 00:32:23,987 [ scc.git] DEBUG HEAD is now at 3d715f4 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2025-11-27 00:32:24,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:32:24,371 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-11-27 00:32:24,374 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2025-11-27 00:32:24,376 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#585](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2025-11-27 00:32:24,378 [ scc.config] DEBUG Found github.token 2025-11-27 00:32:24,378 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2025-11-27 00:32:24,378 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:32:24,415 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:32:24,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:24,417 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:32:24,452 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:32:24,455 [ scc.git] DEBUG has no local changes 2025-11-27 00:32:24,456 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:32:24,461 [ scc.git] DEBUG [detached HEAD 048dd12] merge master -Dorg -Ssuccess-only 2025-11-27 00:32:24,461 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:32:24,461 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:32:24,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2025-11-27 00:32:25,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2025-11-27 00:32:25,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2025-11-27 00:32:26,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-11-27 00:32:26,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:27,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-11-27 00:32:27,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:32:27,731 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-11-27 00:32:28,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2025-11-27 00:32:28,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2025-11-27 00:32:29,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-11-27 00:32:29,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:30,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-11-27 00:32:30,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:32:30,712 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-11-27 00:32:30,712 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:32:30,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-11-27 00:32:30,712 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:32:30,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:30,715 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:32:30,717 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:32:30,717 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:32:30,720 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:32:30,726 [ scc.git] DEBUG Updating 3cd120c..55060a2 2025-11-27 00:32:31,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2025-11-27 00:32:31,399 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2025-11-27 00:32:31,676 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-11-27 00:32:31,677 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2025-11-27 00:32:31,680 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2025-11-27 00:32:31,933 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-11-27 00:32:31,933 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2025-11-27 00:32:31,936 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:32:31,936 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:32:31,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:31,938 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-11-27 00:32:31,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:31,944 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-11-27 00:32:31,956 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2025-11-27 00:32:31,956 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2025-11-27 00:32:31,956 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-11-27 00:32:31,956 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-11-27 00:32:31,956 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-27 00:32:31,956 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-27 00:32:31,959 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-11-27 00:32:31,962 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-11-27 00:32:32,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:32:32,121 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-11-27 00:32:32,125 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2025-11-27 00:32:32,127 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#585](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2025-11-27 00:32:32,129 [ scc.config] DEBUG Found github.token 2025-11-27 00:32:32,129 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2025-11-27 00:32:32,129 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2025-11-27 00:32:32,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:32,135 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2025-11-27 00:32:32,147 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-11-27 00:32:32,147 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-11-27 00:32:32,147 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2025-11-27 00:32:32,148 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-27 00:32:32,148 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-27 00:32:32,150 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-11-27 00:32:32,154 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-11-27 00:32:32,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:32:32,533 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2025-11-27 00:32:32,537 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2025-11-27 00:32:32,539 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#585](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2025-11-27 00:32:32,541 [ scc.config] DEBUG Found github.token 2025-11-27 00:32:32,541 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2025-11-27 00:32:32,541 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:32:32,577 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:32:32,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:32,579 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:32:32,615 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:32:32,619 [ scc.git] DEBUG has no local changes 2025-11-27 00:32:32,619 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:32:32,625 [ scc.git] DEBUG [detached HEAD 99923f0] merge master -Dorg -Ssuccess-only 2025-11-27 00:32:32,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:32:32,625 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:32:33,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2025-11-27 00:32:33,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2025-11-27 00:32:34,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-11-27 00:32:34,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:35,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:32:35,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-11-27 00:32:36,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:32:36,069 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-11-27 00:32:36,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2025-11-27 00:32:36,537 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:32:37,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-11-27 00:32:37,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:38,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:32:38,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-11-27 00:32:38,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:32:38,965 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-11-27 00:32:39,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2025-11-27 00:32:39,451 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:32:39,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-11-27 00:32:40,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:41,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:32:41,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-11-27 00:32:42,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:32:42,026 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-11-27 00:32:42,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2025-11-27 00:32:43,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2025-11-27 00:32:43,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2025-11-27 00:32:43,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2025-11-27 00:32:44,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2025-11-27 00:32:44,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2025-11-27 00:32:45,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2025-11-27 00:32:45,407 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:32:45,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-11-27 00:32:45,407 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:32:45,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:45,409 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:32:45,411 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:32:45,411 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:32:45,414 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:32:45,417 [ scc.git] DEBUG Already up to date. 2025-11-27 00:32:45,417 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2025-11-27 00:32:45,698 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-11-27 00:32:45,698 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2025-11-27 00:32:45,702 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2025-11-27 00:32:45,953 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-11-27 00:32:45,953 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2025-11-27 00:32:45,957 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2025-11-27 00:32:46,211 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-11-27 00:32:46,211 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2025-11-27 00:32:46,215 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:32:46,215 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:32:46,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:46,217 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2025-11-27 00:32:46,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:46,222 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2025-11-27 00:32:46,229 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:32:46,233 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2025-11-27 00:32:46,233 [ scc.git] DEBUG package.json | 2 +- 2025-11-27 00:32:46,233 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2025-11-27 00:32:46,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:32:46,390 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2025-11-27 00:32:46,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:46,395 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2025-11-27 00:32:46,403 [ scc.git] DEBUG Auto-merging package-lock.json 2025-11-27 00:32:46,404 [ scc.git] DEBUG Auto-merging package.json 2025-11-27 00:32:46,404 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:32:46,407 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2025-11-27 00:32:46,407 [ scc.git] DEBUG package.json | 2 +- 2025-11-27 00:32:46,407 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2025-11-27 00:32:46,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:32:46,782 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-11-27 00:32:46,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:46,787 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-11-27 00:32:46,795 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:32:46,797 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-27 00:32:46,798 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-27 00:32:47,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:32:47,180 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:32:47,217 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:32:47,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:47,220 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:32:47,256 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:32:47,259 [ scc.git] DEBUG has no local changes 2025-11-27 00:32:47,259 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:32:47,265 [ scc.git] DEBUG [detached HEAD 9509648] merge master -Dorg -Ssuccess-only 2025-11-27 00:32:47,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:32:47,265 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:32:47,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2025-11-27 00:32:48,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2025-11-27 00:32:48,155 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:32:48,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-11-27 00:32:49,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:49,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:32:50,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-11-27 00:32:50,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:32:50,652 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:32:50,652 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:32:50,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-11-27 00:32:50,652 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:32:50,652 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:50,655 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:32:50,657 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:32:50,657 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:32:50,659 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:32:50,662 [ scc.git] DEBUG Already up to date. 2025-11-27 00:32:50,662 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-11-27 00:32:50,930 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2025-11-27 00:32:50,930 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-11-27 00:32:50,933 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:32:50,933 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:32:50,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:50,936 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2025-11-27 00:32:50,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:50,940 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2025-11-27 00:32:50,946 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:32:50,948 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-27 00:32:50,948 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-27 00:32:51,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:32:51,103 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:32:51,141 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:32:51,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:32:51,143 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:32:51,178 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:32:51,181 [ scc.git] DEBUG has no local changes 2025-11-27 00:32:51,181 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:32:51,186 [ scc.git] DEBUG [detached HEAD cfd44ad] merge master -Dorg -Ssuccess-only 2025-11-27 00:32:51,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:32:51,187 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:32:51,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2025-11-27 00:32:52,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2025-11-27 00:32:52,209 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:32:52,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-11-27 00:32:53,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:53,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:32:54,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-11-27 00:32:54,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:55,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-11-27 00:32:55,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2025-11-27 00:32:55,805 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:32:56,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2025-11-27 00:32:56,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2025-11-27 00:32:57,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-11-27 00:32:57,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:58,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:32:58,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-11-27 00:32:59,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2025-11-27 00:32:59,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-11-27 00:33:00,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2025-11-27 00:33:00,067 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2025-11-27 00:33:00,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2025-11-27 00:33:00,577 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:33:00,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-11-27 00:33:00,578 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:00,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:00,580 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:33:00,582 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:33:00,582 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:33:00,584 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:33:00,587 [ scc.git] DEBUG Already up to date. 2025-11-27 00:33:00,587 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2025-11-27 00:33:00,862 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-11-27 00:33:00,862 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2025-11-27 00:33:00,865 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2025-11-27 00:33:01,133 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-11-27 00:33:01,133 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2025-11-27 00:33:01,136 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:33:01,136 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:01,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:01,138 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2025-11-27 00:33:01,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:01,143 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2025-11-27 00:33:01,150 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:33:01,152 [ scc.git] DEBUG setup.py | 4 +- 2025-11-27 00:33:01,152 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2025-11-27 00:33:01,152 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2025-11-27 00:33:01,152 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2025-11-27 00:33:01,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:01,306 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2025-11-27 00:33:01,309 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:01,311 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2025-11-27 00:33:01,317 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:33:01,320 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-27 00:33:01,320 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-27 00:33:01,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:01,724 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:33:01,761 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:01,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:01,763 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:33:01,798 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:33:01,801 [ scc.git] DEBUG has no local changes 2025-11-27 00:33:01,801 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:33:01,807 [ scc.git] DEBUG [detached HEAD de6a6f6] merge master -Dorg -Ssuccess-only 2025-11-27 00:33:01,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:33:01,807 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:33:02,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2025-11-27 00:33:02,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2025-11-27 00:33:02,804 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:33:03,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-11-27 00:33:03,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:33:04,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:33:05,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-11-27 00:33:05,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:33:05,445 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:33:05,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2025-11-27 00:33:06,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2025-11-27 00:33:06,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-11-27 00:33:07,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:33:08,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-11-27 00:33:08,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:33:08,544 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2025-11-27 00:33:08,544 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:33:08,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-11-27 00:33:08,544 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:08,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:08,547 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:33:08,549 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:33:08,549 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:33:08,552 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:33:08,555 [ scc.git] DEBUG Already up to date. 2025-11-27 00:33:08,555 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-11-27 00:33:08,827 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-11-27 00:33:08,827 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-11-27 00:33:08,831 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-11-27 00:33:09,087 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-11-27 00:33:09,087 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-11-27 00:33:09,091 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:33:09,091 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:09,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:09,093 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-11-27 00:33:09,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:09,098 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-11-27 00:33:09,105 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2025-11-27 00:33:09,105 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2025-11-27 00:33:09,105 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2025-11-27 00:33:09,105 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2025-11-27 00:33:09,105 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2025-11-27 00:33:09,105 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2025-11-27 00:33:09,105 [ scc.git] DEBUG Auto-merging setup.py 2025-11-27 00:33:09,105 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2025-11-27 00:33:09,105 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-27 00:33:09,106 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-27 00:33:09,108 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2025-11-27 00:33:09,112 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2025-11-27 00:33:09,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:09,256 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-11-27 00:33:09,259 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2025-11-27 00:33:09,262 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#585](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - setup.py - omero_signup/signup_settings.py - omero_signup/views.py --conflicts 2025-11-27 00:33:09,264 [ scc.config] DEBUG Found github.token 2025-11-27 00:33:09,264 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2025-11-27 00:33:09,264 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-11-27 00:33:09,266 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:09,268 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-11-27 00:33:09,275 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:33:09,277 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-27 00:33:09,277 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-27 00:33:09,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:09,685 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:33:09,721 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:09,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:09,723 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:33:09,758 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:33:09,761 [ scc.git] DEBUG has no local changes 2025-11-27 00:33:09,761 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:33:09,766 [ scc.git] DEBUG [detached HEAD 050ed08] merge master -Dorg -Ssuccess-only 2025-11-27 00:33:09,767 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:33:09,767 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:33:10,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2025-11-27 00:33:10,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None 2025-11-27 00:33:11,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-11-27 00:33:11,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:33:12,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:33:12,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-11-27 00:33:13,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:33:13,117 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps' 2025-11-27 00:33:13,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2025-11-27 00:33:14,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2025-11-27 00:33:14,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2025-11-27 00:33:15,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:33:15,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:33:16,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2025-11-27 00:33:16,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2025-11-27 00:33:17,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2025-11-27 00:33:17,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2025-11-27 00:33:18,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-11-27 00:33:18,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:33:18,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-11-27 00:33:19,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:33:19,364 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-11-27 00:33:19,365 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:33:19,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-11-27 00:33:19,365 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:19,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:19,367 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:33:19,369 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:33:19,369 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:33:19,372 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:33:19,378 [ scc.git] DEBUG Updating cda3ec6..40b2517 2025-11-27 00:33:19,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2025-11-27 00:33:19,986 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2025-11-27 00:33:20,256 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-11-27 00:33:20,256 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2025-11-27 00:33:20,260 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head' 2025-11-27 00:33:20,522 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-11-27 00:33:20,522 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD 2025-11-27 00:33:20,525 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:33:20,525 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:20,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:20,527 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2025-11-27 00:33:20,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:20,533 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2025-11-27 00:33:20,545 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:33:20,548 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2025-11-27 00:33:20,548 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2025-11-27 00:33:20,548 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2025-11-27 00:33:20,548 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2025-11-27 00:33:20,548 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2025-11-27 00:33:20,548 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2025-11-27 00:33:20,548 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2025-11-27 00:33:20,549 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2025-11-27 00:33:20,549 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2025-11-27 00:33:20,549 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2025-11-27 00:33:20,549 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2025-11-27 00:33:20,549 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2025-11-27 00:33:20,549 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2025-11-27 00:33:20,549 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2025-11-27 00:33:20,549 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2025-11-27 00:33:20,549 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2025-11-27 00:33:20,549 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2025-11-27 00:33:20,549 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2025-11-27 00:33:20,549 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2025-11-27 00:33:20,549 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2025-11-27 00:33:20,549 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2025-11-27 00:33:20,549 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2025-11-27 00:33:20,549 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2025-11-27 00:33:20,549 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2025-11-27 00:33:20,549 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2025-11-27 00:33:20,549 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2025-11-27 00:33:20,550 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2025-11-27 00:33:20,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:20,700 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-11-27 00:33:20,705 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:20,708 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-11-27 00:33:20,716 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:33:20,719 [ scc.git] DEBUG docker | 1 + 2025-11-27 00:33:20,719 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2025-11-27 00:33:21,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:21,103 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:33:21,140 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:21,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:21,142 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:33:21,178 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:33:21,181 [ scc.git] DEBUG has no local changes 2025-11-27 00:33:21,181 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Updating cda3ec6..40b2517 Previously merged: - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:33:21,186 [ scc.git] DEBUG [detached HEAD 83ed3cc] merge master -Dorg -Ssuccess-only 2025-11-27 00:33:21,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:33:21,186 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:33:21,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2025-11-27 00:33:22,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2025-11-27 00:33:22,085 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:33:22,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-11-27 00:33:23,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:33:23,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:33:24,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-11-27 00:33:24,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:33:24,637 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:33:24,637 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:33:24,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-11-27 00:33:24,637 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:24,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:24,640 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:33:24,642 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:33:24,642 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:33:24,644 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:33:24,647 [ scc.git] DEBUG Already up to date. 2025-11-27 00:33:24,647 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-11-27 00:33:24,922 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2025-11-27 00:33:24,922 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-11-27 00:33:24,925 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:33:24,925 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:24,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:24,928 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-11-27 00:33:24,930 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:24,932 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-11-27 00:33:24,939 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:33:24,941 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-27 00:33:24,941 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-27 00:33:25,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:25,100 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:33:25,136 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:25,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:25,138 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:33:25,173 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:33:25,176 [ scc.git] DEBUG has no local changes 2025-11-27 00:33:25,176 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:33:25,181 [ scc.git] DEBUG [detached HEAD 35363f9] merge master -Dorg -Ssuccess-only 2025-11-27 00:33:25,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:33:25,181 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:33:25,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2025-11-27 00:33:26,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2025-11-27 00:33:26,118 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:33:26,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-11-27 00:33:27,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:33:27,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:33:28,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-11-27 00:33:28,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:33:28,612 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:33:28,612 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:33:28,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-11-27 00:33:28,612 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:28,612 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:28,615 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:33:28,617 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:33:28,617 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:33:28,619 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:33:28,626 [ scc.git] DEBUG Updating deab817..160d894 2025-11-27 00:33:29,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2025-11-27 00:33:29,226 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-11-27 00:33:29,507 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2025-11-27 00:33:29,507 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-11-27 00:33:29,511 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:33:29,511 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:29,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:29,513 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-11-27 00:33:29,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:29,518 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-11-27 00:33:29,524 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:33:29,526 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-27 00:33:29,527 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-27 00:33:29,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:29,675 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:33:29,710 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:29,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:29,712 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:33:29,747 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:33:29,750 [ scc.git] DEBUG has no local changes 2025-11-27 00:33:29,750 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:33:29,755 [ scc.git] DEBUG [detached HEAD 6f5da80] merge master -Dorg -Ssuccess-only 2025-11-27 00:33:29,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:33:29,756 [ scc.git] INFO Overriding base-branch from master to main 2025-11-27 00:33:29,756 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:33:30,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2025-11-27 00:33:30,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2025-11-27 00:33:31,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2025-11-27 00:33:31,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2025-11-27 00:33:32,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:33:32,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:33:33,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2025-11-27 00:33:33,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:33:33,592 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2025-11-27 00:33:34,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2025-11-27 00:33:34,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2025-11-27 00:33:35,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2025-11-27 00:33:35,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-11-27 00:33:36,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:33:36,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-11-27 00:33:36,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:33:36,895 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-11-27 00:33:36,895 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:33:36,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-11-27 00:33:36,896 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:36,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:36,898 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2025-11-27 00:33:36,900 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:33:36,900 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2025-11-27 00:33:36,903 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2025-11-27 00:33:36,909 [ scc.git] DEBUG Updating 8f3c313..00e0207 2025-11-27 00:33:37,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2025-11-27 00:33:37,571 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2025-11-27 00:33:37,845 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-11-27 00:33:37,846 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2025-11-27 00:33:37,849 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2025-11-27 00:33:38,107 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-11-27 00:33:38,107 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2025-11-27 00:33:38,111 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:33:38,111 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:38,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:38,113 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-11-27 00:33:38,116 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:38,118 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-11-27 00:33:38,125 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2025-11-27 00:33:38,125 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2025-11-27 00:33:38,125 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-11-27 00:33:38,125 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-27 00:33:38,125 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-27 00:33:38,128 [ scc.git] DEBUG Calling 'git reset --hard 00e02072dc29b04eba14c080ca8a0175a1499c15' 2025-11-27 00:33:38,131 [ scc.git] DEBUG HEAD is now at 00e0207 Merge pull request #20 from will-moore/zarr_python_v3 2025-11-27 00:33:38,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:38,271 [ scc.git] DEBUG Calling 'git merge-base 00e02072dc29b04eba14c080ca8a0175a1499c15 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-11-27 00:33:38,274 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..00e02072dc29b04eba14c080ca8a0175a1499c15' 2025-11-27 00:33:38,277 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#585](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2025-11-27 00:33:38,278 [ scc.config] DEBUG Found github.token 2025-11-27 00:33:38,279 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2025-11-27 00:33:38,279 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2025-11-27 00:33:38,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:38,283 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2025-11-27 00:33:38,290 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-11-27 00:33:38,291 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:33:38,294 [ scc.git] DEBUG README.rst | 3 + 2025-11-27 00:33:38,294 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2025-11-27 00:33:38,294 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2025-11-27 00:33:38,294 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2025-11-27 00:33:38,294 [ scc.git] DEBUG setup.py | 5 +- 2025-11-27 00:33:38,294 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2025-11-27 00:33:38,294 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2025-11-27 00:33:38,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:38,677 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:33:38,712 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:38,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:38,714 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:33:38,748 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:33:38,751 [ scc.git] DEBUG has no local changes 2025-11-27 00:33:38,751 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..00e0207 Previously merged: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:33:38,757 [ scc.git] DEBUG [detached HEAD 22c119f] merge master -Dorg -Ssuccess-only 2025-11-27 00:33:38,757 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:33:38,757 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:33:39,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2025-11-27 00:33:39,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2025-11-27 00:33:39,665 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:33:40,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-11-27 00:33:40,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:33:41,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:33:41,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-11-27 00:33:42,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:33:42,310 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:33:42,310 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:33:42,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-11-27 00:33:42,310 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:42,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:42,313 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:33:42,315 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:33:42,315 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:33:42,317 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:33:42,320 [ scc.git] DEBUG Already up to date. 2025-11-27 00:33:42,320 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2025-11-27 00:33:42,594 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2025-11-27 00:33:42,594 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2025-11-27 00:33:42,598 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:33:42,598 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:42,598 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:42,600 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-11-27 00:33:42,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:42,605 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-11-27 00:33:42,611 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:33:42,613 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-27 00:33:42,613 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-27 00:33:42,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:42,749 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:33:42,785 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:42,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:42,787 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:33:42,822 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:33:42,824 [ scc.git] DEBUG has no local changes 2025-11-27 00:33:42,824 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:33:42,830 [ scc.git] DEBUG [detached HEAD 4afe755] merge master -Dorg -Ssuccess-only 2025-11-27 00:33:42,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:33:42,830 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:33:43,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2025-11-27 00:33:43,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2025-11-27 00:33:43,716 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-27 00:33:44,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-11-27 00:33:44,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:33:45,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-27 00:33:45,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-11-27 00:33:46,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:33:46,265 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:33:46,265 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:33:46,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-11-27 00:33:46,265 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:46,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:46,267 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:33:46,269 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:33:46,270 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:33:46,272 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:33:46,275 [ scc.git] DEBUG Already up to date. 2025-11-27 00:33:46,275 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2025-11-27 00:33:46,556 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2025-11-27 00:33:46,556 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2025-11-27 00:33:46,560 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:33:46,561 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:46,561 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:46,563 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-11-27 00:33:46,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:46,567 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-11-27 00:33:46,574 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-27 00:33:46,577 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-27 00:33:46,577 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-27 00:33:46,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:46,739 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:33:46,776 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:46,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:46,778 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:33:46,814 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:33:46,817 [ scc.git] DEBUG has no local changes 2025-11-27 00:33:46,817 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:33:46,823 [ scc.git] DEBUG [detached HEAD 239df09] merge master -Dorg -Ssuccess-only 2025-11-27 00:33:46,823 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:33:46,823 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:33:47,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2025-11-27 00:33:47,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2025-11-27 00:33:48,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2025-11-27 00:33:48,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-11-27 00:33:49,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-27 00:33:49,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-11-27 00:33:50,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2025-11-27 00:33:50,322 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2025-11-27 00:33:50,323 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:33:50,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-11-27 00:33:50,323 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:50,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:50,325 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-27 00:33:50,327 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:33:50,327 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-27 00:33:50,330 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-27 00:33:50,332 [ scc.git] DEBUG Already up to date. 2025-11-27 00:33:50,332 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2025-11-27 00:33:50,596 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2025-11-27 00:33:50,596 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2025-11-27 00:33:50,600 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:33:50,600 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:50,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:50,603 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-11-27 00:33:50,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:50,608 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-11-27 00:33:50,615 [ scc.git] DEBUG Auto-merging Dockerfile 2025-11-27 00:33:50,615 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2025-11-27 00:33:50,615 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-27 00:33:50,615 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-27 00:33:50,618 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-11-27 00:33:50,622 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-11-27 00:33:50,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:50,787 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-11-27 00:33:50,790 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-11-27 00:33:50,792 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#585](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2025-11-27 00:33:50,794 [ scc.config] DEBUG Found github.token 2025-11-27 00:33:50,795 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2025-11-27 00:33:50,795 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:33:50,832 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:50,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:50,834 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:33:50,870 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:33:50,874 [ scc.git] DEBUG has no local changes 2025-11-27 00:33:50,874 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:33:50,879 [ scc.git] DEBUG [detached HEAD 45950b0] merge master -Dorg -Ssuccess-only 2025-11-27 00:33:50,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:33:50,880 [ scc.git] INFO Overriding base-branch from master to develop 2025-11-27 00:33:50,880 [ scc.repo] DEBUG ## PRs found: 2025-11-27 00:33:51,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-11-27 00:33:51,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/229 HTTP/1.1" 200 None 2025-11-27 00:33:52,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/229/comments HTTP/1.1" 200 None 2025-11-27 00:33:52,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-11-27 00:33:53,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-11-27 00:33:53,250 [ scc.repo] DEBUG ## Branches found: 2025-11-27 00:33:53,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-11-27 00:33:53,251 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:53,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:53,253 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-11-27 00:33:53,255 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-27 00:33:53,255 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-11-27 00:33:53,258 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-11-27 00:33:53,269 [ scc.git] DEBUG Updating 4b4c755..0c7356a 2025-11-27 00:33:53,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2025-11-27 00:33:54,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2025-11-27 00:33:55,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2025-11-27 00:33:55,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2025-11-27 00:33:56,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2025-11-27 00:33:56,524 [ scc.git] DEBUG ## Unique users: [] 2025-11-27 00:33:56,524 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:56,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:56,526 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-27 00:33:56,563 [ scc.git] DEBUG Get sha1 of %s 2025-11-27 00:33:56,563 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-27 00:33:56,565 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:33:56,602 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:33:56,605 [ scc.git] DEBUG has no local changes 2025-11-27 00:33:56,605 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 229 Rdornier 'Adding support for custom user label' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..0c7356a Previously merged: - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:33:56,611 [ scc.git] DEBUG [detached HEAD 5a440a8] merge master -Dorg -Ssuccess-only 2025-11-27 00:33:56,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:33:56,611 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-27 00:33:56,679 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2025-11-27 00:33:56,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:56,935 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2025-11-27 00:33:56,937 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2025-11-27 00:33:57,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:57,356 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2025-11-27 00:33:57,358 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2025-11-27 00:33:57,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:57,748 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2025-11-27 00:33:57,750 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2025-11-27 00:33:58,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:58,138 [ scc.config] DEBUG Found submodule.omero-figure.url 2025-11-27 00:33:58,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:58,542 [ scc.config] DEBUG Found submodule.omero-figure.branch 2025-11-27 00:33:58,544 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2025-11-27 00:33:58,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:58,939 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2025-11-27 00:33:58,941 [ scc.config] DEBUG Found submodule.omero-gallery.url 2025-11-27 00:33:59,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:59,367 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2025-11-27 00:33:59,369 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2025-11-27 00:33:59,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:33:59,770 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2025-11-27 00:33:59,772 [ scc.config] DEBUG Found submodule.omero-mapr.url 2025-11-27 00:34:00,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:34:00,210 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2025-11-27 00:34:00,212 [ scc.config] DEBUG Found submodule.omero-metadata.url 2025-11-27 00:34:00,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:34:00,614 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2025-11-27 00:34:00,616 [ scc.config] DEBUG Found submodule.omero-parade.url 2025-11-27 00:34:01,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:34:01,017 [ scc.config] DEBUG Found submodule.omero-parade.branch 2025-11-27 00:34:01,018 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2025-11-27 00:34:01,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:34:01,408 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2025-11-27 00:34:01,410 [ scc.config] DEBUG Found submodule.omero-rois.url 2025-11-27 00:34:01,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:34:01,806 [ scc.config] DEBUG Found submodule.omero-signup.url 2025-11-27 00:34:02,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:34:02,200 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2025-11-27 00:34:02,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:34:02,594 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2025-11-27 00:34:02,596 [ scc.config] DEBUG Found submodule.omero-upload.url 2025-11-27 00:34:02,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:34:03,005 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2025-11-27 00:34:03,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:34:03,409 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2025-11-27 00:34:03,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:34:03,798 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2025-11-27 00:34:03,800 [ scc.config] DEBUG Found submodule.omero-weberror.url 2025-11-27 00:34:04,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:34:04,200 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2025-11-27 00:34:04,202 [ scc.config] DEBUG Found submodule.omero-webtest.url 2025-11-27 00:34:04,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:34:04,613 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2025-11-27 00:34:04,615 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2025-11-27 00:34:05,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:34:05,010 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2025-11-27 00:34:05,012 [ scc.config] DEBUG Found submodule.scripts.url 2025-11-27 00:34:05,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-27 00:34:05,419 [ scc.config] DEBUG Found submodule.scripts.branch 2025-11-27 00:34:05,419 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-27 00:34:05,493 [ scc.git] DEBUG has local changes 2025-11-27 00:34:05,493 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-zarr Excluded PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 174 will-moore 'Skip wells' - PR 181 will-moore 'Add labels support for import' Conflicting PRs (not included): - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' (user: Rdornier) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) Updating 9cc36cde..691a9a60 Previously merged: - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' Conflicting PRs (not included): - PR 637 Rdornier 'Fix scalebar position' - PR 643 Rdornier 'Shape scaling' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Updating cda3ec6..40b2517 Previously merged: - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..00e0207 Previously merged: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 229 Rdornier 'Adding support for custom user label' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..0c7356a Previously merged: - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#585 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/585/)' 2025-11-27 00:34:05,502 [ scc.git] DEBUG [detached HEAD 566d03a] merge master -Dorg -Ssuccess-only 2025-11-27 00:34:05,503 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2025-11-27 00:34:05,503 [ scc.merge] INFO Repository: ome/omero-plugins 2025-11-27 00:34:05,503 [ scc.merge] INFO Already up to date. 2025-11-27 00:34:05,503 [ scc.merge] INFO 2025-11-27 00:34:05,503 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,503 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-11-27 00:34:05,503 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-11-27 00:34:05,503 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-11-27 00:34:05,503 [ scc.merge] INFO 2025-11-27 00:34:05,503 [ scc.merge] INFO Repository: ome/minimal-omero-client 2025-11-27 00:34:05,503 [ scc.merge] INFO Already up to date. 2025-11-27 00:34:05,503 [ scc.merge] INFO 2025-11-27 00:34:05,503 [ scc.merge] INFO 2025-11-27 00:34:05,503 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2025-11-27 00:34:05,503 [ scc.merge] INFO Excluded PRs: 2025-11-27 00:34:05,503 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2025-11-27 00:34:05,503 [ scc.merge] INFO Already up to date. 2025-11-27 00:34:05,503 [ scc.merge] INFO 2025-11-27 00:34:05,503 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,503 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:34:05,503 [ scc.merge] INFO 2025-11-27 00:34:05,503 [ scc.merge] INFO Repository: ome/omero-cli-render 2025-11-27 00:34:05,503 [ scc.merge] INFO Excluded PRs: 2025-11-27 00:34:05,503 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) 2025-11-27 00:34:05,503 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2025-11-27 00:34:05,503 [ scc.merge] INFO Already up to date. 2025-11-27 00:34:05,503 [ scc.merge] INFO 2025-11-27 00:34:05,503 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,503 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2025-11-27 00:34:05,503 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2025-11-27 00:34:05,503 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2025-11-27 00:34:05,503 [ scc.merge] INFO - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:34:05,503 [ scc.merge] INFO 2025-11-27 00:34:05,503 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2025-11-27 00:34:05,503 [ scc.merge] INFO Excluded PRs: 2025-11-27 00:34:05,503 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) 2025-11-27 00:34:05,503 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2025-11-27 00:34:05,504 [ scc.merge] INFO Updating 11d3587..37ea700 2025-11-27 00:34:05,504 [ scc.merge] INFO Previously merged: 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-11-27 00:34:05,504 [ scc.merge] INFO 2025-11-27 00:34:05,504 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' 2025-11-27 00:34:05,504 [ scc.merge] INFO 2025-11-27 00:34:05,504 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2025-11-27 00:34:05,504 [ scc.merge] INFO 2025-11-27 00:34:05,504 [ scc.merge] INFO Repository: ome/omero-figure 2025-11-27 00:34:05,504 [ scc.merge] INFO Excluded PRs: 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' (user: Rdornier) 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft) 2025-11-27 00:34:05,504 [ scc.merge] INFO Updating 9cc36cde..691a9a60 2025-11-27 00:34:05,504 [ scc.merge] INFO Previously merged: 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-11-27 00:34:05,504 [ scc.merge] INFO 2025-11-27 00:34:05,504 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2025-11-27 00:34:05,504 [ scc.merge] INFO 2025-11-27 00:34:05,504 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-27 00:34:05,504 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 643 Rdornier 'Shape scaling' 2025-11-27 00:34:05,505 [ scc.merge] INFO 2025-11-27 00:34:05,505 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2025-11-27 00:34:05,505 [ scc.merge] INFO Already up to date. 2025-11-27 00:34:05,505 [ scc.merge] INFO 2025-11-27 00:34:05,505 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:34:05,505 [ scc.merge] INFO 2025-11-27 00:34:05,505 [ scc.merge] INFO Repository: ome/omero-gallery 2025-11-27 00:34:05,505 [ scc.merge] INFO Already up to date. 2025-11-27 00:34:05,505 [ scc.merge] INFO 2025-11-27 00:34:05,505 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-11-27 00:34:05,505 [ scc.merge] INFO 2025-11-27 00:34:05,505 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-11-27 00:34:05,505 [ scc.merge] INFO 2025-11-27 00:34:05,505 [ scc.merge] INFO Repository: ome/omero-iviewer 2025-11-27 00:34:05,505 [ scc.merge] INFO Excluded PRs: 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2025-11-27 00:34:05,505 [ scc.merge] INFO Updating 7a798ce..bb94cf8 2025-11-27 00:34:05,505 [ scc.merge] INFO Previously merged: 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-11-27 00:34:05,505 [ scc.merge] INFO 2025-11-27 00:34:05,505 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-11-27 00:34:05,505 [ scc.merge] INFO 2025-11-27 00:34:05,505 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-11-27 00:34:05,505 [ scc.merge] INFO 2025-11-27 00:34:05,505 [ scc.merge] INFO Repository: ome/omero-mapr 2025-11-27 00:34:05,505 [ scc.merge] INFO Excluded PRs: 2025-11-27 00:34:05,505 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2025-11-27 00:34:05,505 [ scc.merge] INFO Already up to date. 2025-11-27 00:34:05,505 [ scc.merge] INFO 2025-11-27 00:34:05,506 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-11-27 00:34:05,506 [ scc.merge] INFO 2025-11-27 00:34:05,506 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:34:05,506 [ scc.merge] INFO 2025-11-27 00:34:05,506 [ scc.merge] INFO Repository: ome/omero-metadata 2025-11-27 00:34:05,506 [ scc.merge] INFO Updating 3cd120c..55060a2 2025-11-27 00:34:05,506 [ scc.merge] INFO Previously merged: 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-11-27 00:34:05,506 [ scc.merge] INFO 2025-11-27 00:34:05,506 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-11-27 00:34:05,506 [ scc.merge] INFO 2025-11-27 00:34:05,506 [ scc.merge] INFO Repository: ome/omero-parade 2025-11-27 00:34:05,506 [ scc.merge] INFO Excluded PRs: 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2025-11-27 00:34:05,506 [ scc.merge] INFO Already up to date. 2025-11-27 00:34:05,506 [ scc.merge] INFO 2025-11-27 00:34:05,506 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-11-27 00:34:05,506 [ scc.merge] INFO 2025-11-27 00:34:05,506 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2025-11-27 00:34:05,506 [ scc.merge] INFO Already up to date. 2025-11-27 00:34:05,506 [ scc.merge] INFO 2025-11-27 00:34:05,506 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:34:05,506 [ scc.merge] INFO 2025-11-27 00:34:05,506 [ scc.merge] INFO Repository: ome/omero-rois 2025-11-27 00:34:05,506 [ scc.merge] INFO Excluded PRs: 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-11-27 00:34:05,506 [ scc.merge] INFO Already up to date. 2025-11-27 00:34:05,506 [ scc.merge] INFO 2025-11-27 00:34:05,506 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:34:05,506 [ scc.merge] INFO 2025-11-27 00:34:05,506 [ scc.merge] INFO Repository: ome/omero-signup 2025-11-27 00:34:05,506 [ scc.merge] INFO Already up to date. 2025-11-27 00:34:05,506 [ scc.merge] INFO 2025-11-27 00:34:05,506 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,506 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:34:05,506 [ scc.merge] INFO 2025-11-27 00:34:05,507 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-27 00:34:05,507 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2025-11-27 00:34:05,507 [ scc.merge] INFO 2025-11-27 00:34:05,507 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2025-11-27 00:34:05,507 [ scc.merge] INFO Excluded PRs: 2025-11-27 00:34:05,507 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2025-11-27 00:34:05,507 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2025-11-27 00:34:05,507 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2025-11-27 00:34:05,507 [ scc.merge] INFO Updating cda3ec6..40b2517 2025-11-27 00:34:05,507 [ scc.merge] INFO Previously merged: 2025-11-27 00:34:05,507 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2025-11-27 00:34:05,507 [ scc.merge] INFO 2025-11-27 00:34:05,507 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,507 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-11-27 00:34:05,507 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps' 2025-11-27 00:34:05,507 [ scc.merge] INFO 2025-11-27 00:34:05,507 [ scc.merge] INFO Repository: ome/omero-upload 2025-11-27 00:34:05,507 [ scc.merge] INFO Already up to date. 2025-11-27 00:34:05,507 [ scc.merge] INFO 2025-11-27 00:34:05,507 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,507 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:34:05,507 [ scc.merge] INFO 2025-11-27 00:34:05,507 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2025-11-27 00:34:05,507 [ scc.merge] INFO Updating deab817..160d894 2025-11-27 00:34:05,507 [ scc.merge] INFO Previously merged: 2025-11-27 00:34:05,507 [ scc.merge] INFO - PR 20 jburel 'Build' 2025-11-27 00:34:05,507 [ scc.merge] INFO 2025-11-27 00:34:05,507 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,507 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:34:05,507 [ scc.merge] INFO 2025-11-27 00:34:05,507 [ scc.merge] INFO Repository: ome/omero-web-zarr 2025-11-27 00:34:05,507 [ scc.merge] INFO Excluded PRs: 2025-11-27 00:34:05,507 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2025-11-27 00:34:05,507 [ scc.merge] INFO Updating 8f3c313..00e0207 2025-11-27 00:34:05,507 [ scc.merge] INFO Previously merged: 2025-11-27 00:34:05,507 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2025-11-27 00:34:05,507 [ scc.merge] INFO 2025-11-27 00:34:05,507 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,507 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2025-11-27 00:34:05,507 [ scc.merge] INFO 2025-11-27 00:34:05,507 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-27 00:34:05,507 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-11-27 00:34:05,507 [ scc.merge] INFO 2025-11-27 00:34:05,507 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2025-11-27 00:34:05,507 [ scc.merge] INFO Already up to date. 2025-11-27 00:34:05,507 [ scc.merge] INFO 2025-11-27 00:34:05,507 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,507 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:34:05,507 [ scc.merge] INFO 2025-11-27 00:34:05,507 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2025-11-27 00:34:05,508 [ scc.merge] INFO Already up to date. 2025-11-27 00:34:05,508 [ scc.merge] INFO 2025-11-27 00:34:05,508 [ scc.merge] INFO Merged PRs: 2025-11-27 00:34:05,508 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-27 00:34:05,508 [ scc.merge] INFO 2025-11-27 00:34:05,508 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2025-11-27 00:34:05,508 [ scc.merge] INFO Already up to date. 2025-11-27 00:34:05,508 [ scc.merge] INFO 2025-11-27 00:34:05,508 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-27 00:34:05,508 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2025-11-27 00:34:05,508 [ scc.merge] INFO 2025-11-27 00:34:05,508 [ scc.merge] INFO Repository: ome/scripts 2025-11-27 00:34:05,508 [ scc.merge] INFO Excluded PRs: 2025-11-27 00:34:05,508 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' (user: Rdornier) 2025-11-27 00:34:05,508 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-11-27 00:34:05,508 [ scc.merge] INFO Updating 4b4c755..0c7356a 2025-11-27 00:34:05,508 [ scc.merge] INFO Previously merged: 2025-11-27 00:34:05,508 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-11-27 00:34:05,508 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2025-11-27 00:34:05,508 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2025-11-27 00:34:05,508 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2025-11-27 00:34:05,508 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2025-11-27 00:34:05,508 [ scc.merge] INFO 2025-11-27 00:34:05,508 [ scc.merge] INFO 2025-11-27 00:34:05,508 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-11-27 00:34:05,508 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-11-27 00:34:05,510 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-11-27 00:34:05,512 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-11-27 00:34:05,514 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-11-27 00:34:05,516 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-11-27 00:34:05,518 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-11-27 00:34:05,520 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-11-27 00:34:05,522 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-11-27 00:34:05,524 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-11-27 00:34:05,526 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-11-27 00:34:05,528 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-11-27 00:34:05,530 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-11-27 00:34:05,532 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-11-27 00:34:05,534 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-11-27 00:34:05,536 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-11-27 00:34:05,538 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-11-27 00:34:05,540 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-11-27 00:34:05,541 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-11-27 00:34:05,543 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-11-27 00:34:05,545 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-11-27 00:34:05,547 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-11-27 00:34:05,549 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-27 00:34:05,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-11-27 00:34:05,551 [ scc.git] DEBUG Calling 'git remote' 2025-11-27 00:34:05,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD e78e10f] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD eee7c3e] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-11-27 00:34:52,646 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-11-27 00:35:02,280 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-11-27 00:35:04,799 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-11-27 00:35:09,590 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-11-27 00:35:48,977 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS