Started by upstream project "Trigger" build number 719
originally caused by:
Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-plugins-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
Commit message: "Merge pull request #18 from jburel/python_311"
> git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master)
Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378"
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-plugins.git
> git --version # timeout=10
> git --version # 'git version 2.43.5'
> git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
> git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
Cleaning workspace
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
> git submodule foreach --recursive git reset --hard # timeout=10
> git submodule foreach --recursive git clean -fdx # timeout=10
> git remote # timeout=10
> git submodule init # timeout=10
> git submodule sync # timeout=10
> git config --get remote.origin.url # timeout=10
> git submodule init # timeout=10
> git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
> git config --get submodule.omero-figure.url # timeout=10
> git config -f .gitmodules --get submodule.omero-figure.path # timeout=10
> git config --get submodule.minimal-omero-client.url # timeout=10
> git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10
> git config --get submodule.scripts.url # timeout=10
> git config -f .gitmodules --get submodule.scripts.path # timeout=10
> git config --get submodule.omero-test-infra.url # timeout=10
> git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10
> git config --get submodule.omero-prometheus-tools.url # timeout=10
> git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10
> git config --get submodule.omero-parade.url # timeout=10
> git config -f .gitmodules --get submodule.omero-parade.path # timeout=10
> git config --get submodule.omero-mapr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10
> git config --get submodule.omero-fpbioimage.url # timeout=10
> git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10
> git config --get submodule.omero-iviewer.url # timeout=10
> git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10
> git config --get submodule.omero-gallery.url # timeout=10
> git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10
> git config --get submodule.rOMERO-gateway.url # timeout=10
> git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10
> git config --get submodule.omero-weberror.url # timeout=10
> git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10
> git config --get submodule.omero-cli-render.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10
> git config --get submodule.omero-cli-duplicate.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10
> git config --get submodule.omero-metadata.url # timeout=10
> git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10
> git config --get submodule.omero-webtest.url # timeout=10
> git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10
> git config --get submodule.omero-upload.url # timeout=10
> git config -f .gitmodules --get submodule.omero-upload.path # timeout=10
> git config --get submodule.omero-virtual-microscope.url # timeout=10
> git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10
> git config --get submodule.omero-rois.url # timeout=10
> git config -f .gitmodules --get submodule.omero-rois.path # timeout=10
> git config --get submodule.omero-signup.url # timeout=10
> git config -f .gitmodules --get submodule.omero-signup.path # timeout=10
> git config --get submodule.omero-web-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10
> git config --get submodule.omero-cli-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10
> git submodule update --init --recursive omero-figure # timeout=10
> git submodule update --init --recursive minimal-omero-client # timeout=10
> git submodule update --init --recursive scripts # timeout=10
> git submodule update --init --recursive omero-test-infra # timeout=10
> git submodule update --init --recursive omero-prometheus-tools # timeout=10
> git submodule update --init --recursive omero-parade # timeout=10
> git submodule update --init --recursive omero-mapr # timeout=10
> git submodule update --init --recursive omero-fpbioimage # timeout=10
> git submodule update --init --recursive omero-iviewer # timeout=10
> git submodule update --init --recursive omero-gallery # timeout=10
> git submodule update --init --recursive rOMERO-gateway # timeout=10
> git submodule update --init --recursive omero-weberror # timeout=10
> git submodule update --init --recursive omero-cli-render # timeout=10
> git submodule update --init --recursive omero-cli-duplicate # timeout=10
> git submodule update --init --recursive omero-metadata # timeout=10
> git submodule update --init --recursive omero-webtest # timeout=10
> git submodule update --init --recursive omero-upload # timeout=10
> git submodule update --init --recursive omero-virtual-microscope # timeout=10
> git submodule update --init --recursive omero-rois # timeout=10
> git submodule update --init --recursive omero-signup # timeout=10
> git submodule update --init --recursive omero-web-zarr # timeout=10
> git submodule update --init --recursive omero-cli-zarr # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 617
[Pipeline] sh
+ pushd build
~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-plugins-push
+ python3.11 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ python3.11 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1)
Collecting pip
Using cached pip-25.3-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 22.3.1
Uninstalling pip-22.3.1:
Successfully uninstalled pip-22.3.1
Successfully installed pip-25.3
+ python3.11 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel.yaml-0.18.16-py3-none-any.whl.metadata (25 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached pynacl-1.6.1-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.8 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB)
Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB)
Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB)
Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes)
Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2025.11.12-py3-none-any.whl.metadata (2.5 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
Using cached ruamel_yaml_clib-0.2.15-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (3.5 kB)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached pygithub-2.8.1-py3-none-any.whl (432 kB)
Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB)
Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB)
Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB)
Using cached pynacl-1.6.1-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB)
Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
Using cached requests-2.32.5-py3-none-any.whl (64 kB)
Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB)
Using cached idna-3.11-py3-none-any.whl (71 kB)
Using cached certifi-2025.11.12-py3-none-any.whl (159 kB)
Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached pycparser-2.23-py3-none-any.whl (118 kB)
Using cached ruamel.yaml-0.18.16-py3-none-any.whl (119 kB)
Using cached ruamel_yaml_clib-0.2.15-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (777 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2025.11.12 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.3 future-1.0.0 idna-3.11 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.1 requests-2.32.5 ruamel.yaml-0.18.16 ruamel.yaml.clib-0.2.15 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-plugins.git
+ BASE_REPO=omero-plugins.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-12-09 00:28:42,277 [ scc.config] DEBUG Found github.token
2025-12-09 00:28:42,278 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-12-09 00:28:42,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:28:42,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:28:43,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-12-09 00:28:43,268 [ scc.gh] DEBUG 3922 remaining from 5000 (Reset at 00:12
2025-12-09 00:28:43,269 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:28:43,271 [ scc.git] DEBUG Check current status
2025-12-09 00:28:43,271 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:28:43,273 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-12-09 00:28:43,273 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:28:43,318 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-12-09 00:28:43,320 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-12-09 00:28:43,324 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-12-09 00:28:43,327 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-12-09 00:28:43,331 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2025-12-09 00:28:43,334 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-12-09 00:28:43,337 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-12-09 00:28:43,340 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2025-12-09 00:28:43,343 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-12-09 00:28:43,346 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-12-09 00:28:43,349 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-12-09 00:28:43,352 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-12-09 00:28:43,355 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-12-09 00:28:43,358 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-12-09 00:28:43,361 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-12-09 00:28:43,363 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-12-09 00:28:43,366 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-12-09 00:28:43,369 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-12-09 00:28:43,371 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-12-09 00:28:43,374 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-12-09 00:28:43,377 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-12-09 00:28:43,380 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2025-12-09 00:28:43,383 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:28:43,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2025-12-09 00:28:44,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:28:44,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:28:45,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:28:45,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:28:45,643 [ scc.git] DEBUG Resetting...
2025-12-09 00:28:45,643 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-12-09 00:28:45,650 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-12-09 00:28:45,650 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-12-09 00:28:45,744 [ scc.git] DEBUG Check current status
2025-12-09 00:28:45,744 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:28:45,747 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-12-09 00:28:45,747 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:28:45,789 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-12-09 00:28:45,792 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-12-09 00:28:45,795 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-12-09 00:28:45,798 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-12-09 00:28:45,802 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2025-12-09 00:28:45,805 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-12-09 00:28:45,808 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-12-09 00:28:45,811 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2025-12-09 00:28:45,814 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-12-09 00:28:45,817 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-12-09 00:28:45,820 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-12-09 00:28:45,822 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-12-09 00:28:45,825 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-12-09 00:28:45,828 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-12-09 00:28:45,831 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-12-09 00:28:45,834 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-12-09 00:28:45,836 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-12-09 00:28:45,838 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-12-09 00:28:45,841 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-12-09 00:28:45,844 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-12-09 00:28:45,846 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-12-09 00:28:45,850 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2025-12-09 00:28:45,850 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-12-09 00:28:45,850 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-12-09 00:28:45,850 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-12-09 00:28:45,850 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-12-09 00:28:45,850 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-12-09 00:28:45,851 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:28:46,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2025-12-09 00:28:46,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2025-12-09 00:28:46,708 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:28:46,708 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-12-09 00:28:47,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2025-12-09 00:28:47,191 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:28:47,191 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-12-09 00:28:47,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2025-12-09 00:28:47,705 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:28:47,705 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-12-09 00:28:47,705 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:28:47,705 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:28:47,705 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:28:47,708 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:28:47,710 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:28:47,710 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:28:47,713 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:28:47,715 [ scc.git] DEBUG Already up to date.
2025-12-09 00:28:47,716 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2025-12-09 00:28:47,986 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-12-09 00:28:47,987 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2025-12-09 00:28:47,992 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2025-12-09 00:28:48,249 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-12-09 00:28:48,250 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2025-12-09 00:28:48,256 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2025-12-09 00:28:48,513 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-12-09 00:28:48,513 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2025-12-09 00:28:48,519 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:28:48,519 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:28:48,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:28:48,521 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-12-09 00:28:48,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:28:48,526 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-12-09 00:28:48,538 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:28:48,541 [ scc.git] DEBUG scripts | 2 +-
2025-12-09 00:28:48,541 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-12-09 00:28:48,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:28:48,686 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-12-09 00:28:48,689 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:28:48,690 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-12-09 00:28:48,703 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:28:48,705 [ scc.git] DEBUG omero-figure | 2 +-
2025-12-09 00:28:48,705 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-12-09 00:28:49,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:28:49,078 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-12-09 00:28:49,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:28:49,082 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-12-09 00:28:49,094 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:28:49,097 [ scc.git] DEBUG omero-iviewer | 2 +-
2025-12-09 00:28:49,097 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-12-09 00:28:49,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:28:49,469 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:28:49,526 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2025-12-09 00:28:49,551 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2025-12-09 00:28:49,565 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-12-09 00:28:49,565 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:28:49,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:28:49,567 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:28:49,641 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38c291e050> has no local changes
2025-12-09 00:28:49,641 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:28:49,709 [ scc.git] DEBUG [detached HEAD 957633b] merge master -Dorg -Snone
2025-12-09 00:28:49,709 [ scc.merge] INFO Repository: ome/omero-plugins
2025-12-09 00:28:49,709 [ scc.merge] INFO Already up to date.
2025-12-09 00:28:49,709 [ scc.merge] INFO
2025-12-09 00:28:49,709 [ scc.merge] INFO Merged PRs:
2025-12-09 00:28:49,709 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-12-09 00:28:49,709 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-12-09 00:28:49,709 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-12-09 00:28:49,709 [ scc.merge] INFO
2025-12-09 00:28:49,709 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-12-09 00:28:49,709 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'minimal-omero-client'
Synchronizing submodule url for 'omero-cli-duplicate'
Synchronizing submodule url for 'omero-cli-render'
Synchronizing submodule url for 'omero-cli-zarr'
Synchronizing submodule url for 'omero-figure'
Synchronizing submodule url for 'omero-fpbioimage'
Synchronizing submodule url for 'omero-gallery'
Synchronizing submodule url for 'omero-iviewer'
Synchronizing submodule url for 'omero-mapr'
Synchronizing submodule url for 'omero-metadata'
Synchronizing submodule url for 'omero-parade'
Synchronizing submodule url for 'omero-prometheus-tools'
Synchronizing submodule url for 'omero-rois'
Synchronizing submodule url for 'omero-signup'
Synchronizing submodule url for 'omero-test-infra'
Synchronizing submodule url for 'omero-upload'
Synchronizing submodule url for 'omero-virtual-microscope'
Synchronizing submodule url for 'omero-web-zarr'
Synchronizing submodule url for 'omero-weberror'
Synchronizing submodule url for 'omero-webtest'
Synchronizing submodule url for 'rOMERO-gateway'
Synchronizing submodule url for 'scripts'
From https://github.com/ome/omero-cli-zarr
+ 26c39c6...6626e34 pre-commit-ci-update-config -> origin/pre-commit-ci-update-config (forced update)
Submodule path 'omero-cli-zarr': checked out '37ea7000309b4f8b87c5122c138fb59b17ecf86b'
Submodule path 'omero-figure': checked out '691a9a60c01bcce1f01f90d528584cb6e68124f9'
Submodule path 'omero-iviewer': checked out '5e2de43ad401fb00690a79644056e0ac15fabfd5'
Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501'
From https://github.com/ome/omero-rois
+ 7a73fd3...ea65cd3 pre-commit-ci-update-config -> origin/pre-commit-ci-update-config (forced update)
Submodule path 'omero-test-infra': checked out '14c123146fc9dc2a368638e415b0766adf2fbdaf'
Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f'
Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368'
Submodule path 'scripts': checked out '18a9a752ca35a4bbe40246e3c225c0fb224ce883'
Merge all submodules using repository configuration:
base-branch: master
submodules:
scripts:
base-branch: develop
omero-web-zarr:
base-branch: main
2025-12-09 00:28:56,803 [ scc.config] DEBUG Found github.token
2025-12-09 00:28:56,805 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-12-09 00:28:56,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:28:57,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:28:57,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-12-09 00:28:57,804 [ scc.gh] DEBUG 3908 remaining from 5000 (Reset at 00:12
2025-12-09 00:28:57,805 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:28:57,807 [ scc.git] DEBUG Check current status
2025-12-09 00:28:57,807 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:28:57,810 [ scc.git] DEBUG 957633b merge master -Dorg -Snone
2025-12-09 00:28:57,810 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:28:57,854 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-12-09 00:28:57,856 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-12-09 00:28:57,860 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-12-09 00:28:57,863 [ scc.git] DEBUG +37ea7000309b4f8b87c5122c138fb59b17ecf86b omero-cli-zarr (v0.7.0rc1-2-g37ea700)
2025-12-09 00:28:57,870 [ scc.git] DEBUG +691a9a60c01bcce1f01f90d528584cb6e68124f9 omero-figure (v7.2.1-116-g691a9a60)
2025-12-09 00:28:57,873 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-12-09 00:28:57,876 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-12-09 00:28:57,880 [ scc.git] DEBUG +5e2de43ad401fb00690a79644056e0ac15fabfd5 omero-iviewer (v0.16.0-20-g5e2de43)
2025-12-09 00:28:57,882 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-12-09 00:28:57,885 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2)
2025-12-09 00:28:57,888 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-12-09 00:28:57,891 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-12-09 00:28:57,894 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-12-09 00:28:57,897 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-12-09 00:28:57,900 [ scc.git] DEBUG +14c123146fc9dc2a368638e415b0766adf2fbdaf omero-test-infra (v0.6.3-65-g14c1231)
2025-12-09 00:28:57,903 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-12-09 00:28:57,906 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894)
2025-12-09 00:28:57,908 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685)
2025-12-09 00:28:57,911 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-12-09 00:28:57,914 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-12-09 00:28:57,916 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-12-09 00:28:57,921 [ scc.git] DEBUG +18a9a752ca35a4bbe40246e3c225c0fb224ce883 scripts (v5.9.1-17-g18a9a75)
2025-12-09 00:28:57,925 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:28:57,925 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2025-12-09 00:28:57,926 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-web-zarr:
base-branch: main
scripts:
base-branch: develop
2025-12-09 00:28:58,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2025-12-09 00:28:58,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:28:59,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:28:59,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:00,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:00,097 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:00,167 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-12-09 00:29:00,167 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:00,169 [ scc.git] DEBUG Check current status
2025-12-09 00:29:00,169 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:00,171 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0
2025-12-09 00:29:00,171 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:00,209 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:00,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None
2025-12-09 00:29:01,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:01,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:02,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:02,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:02,439 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:02,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:02,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-12-09 00:29:02,474 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:02,476 [ scc.git] DEBUG Check current status
2025-12-09 00:29:02,476 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:02,478 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build
2025-12-09 00:29:02,479 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:02,515 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:02,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None
2025-12-09 00:29:03,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:03,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:04,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:04,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:04,785 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:04,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:04,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-12-09 00:29:04,821 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:04,823 [ scc.git] DEBUG Check current status
2025-12-09 00:29:04,823 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:04,825 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export
2025-12-09 00:29:04,825 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:04,862 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:05,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None
2025-12-09 00:29:05,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:06,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:06,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:07,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:07,303 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:07,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:07,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-12-09 00:29:07,341 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:07,343 [ scc.git] DEBUG Check current status
2025-12-09 00:29:07,343 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:07,345 [ scc.git] DEBUG 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0
2025-12-09 00:29:07,346 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:07,382 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:07,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None
2025-12-09 00:29:08,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:08,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:09,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:09,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:09,598 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:09,634 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:09,634 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-12-09 00:29:09,634 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:09,636 [ scc.git] DEBUG Check current status
2025-12-09 00:29:09,636 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:09,639 [ scc.git] DEBUG 691a9a60 Merge pull request #610 from will-moore/contributing_docs
2025-12-09 00:29:09,639 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:09,676 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:10,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None
2025-12-09 00:29:10,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:11,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:11,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:11,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:11,958 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:11,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:11,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-12-09 00:29:11,996 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:11,998 [ scc.git] DEBUG Check current status
2025-12-09 00:29:11,998 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:12,000 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build
2025-12-09 00:29:12,000 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:12,038 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:12,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None
2025-12-09 00:29:12,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:13,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:13,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:14,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:14,235 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:14,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:14,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-12-09 00:29:14,271 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:14,273 [ scc.git] DEBUG Check current status
2025-12-09 00:29:14,273 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:14,275 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build
2025-12-09 00:29:14,276 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:14,313 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:14,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None
2025-12-09 00:29:15,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:15,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:16,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:16,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:16,528 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:16,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:16,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-12-09 00:29:16,564 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:16,566 [ scc.git] DEBUG Check current status
2025-12-09 00:29:16,566 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:16,568 [ scc.git] DEBUG 5e2de43 Merge pull request #510 from joshmoore/issue-509
2025-12-09 00:29:16,569 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:16,605 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:17,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None
2025-12-09 00:29:17,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:17,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:18,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:19,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:19,040 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:19,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:19,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-12-09 00:29:19,079 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:19,081 [ scc.git] DEBUG Check current status
2025-12-09 00:29:19,081 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:19,083 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0
2025-12-09 00:29:19,083 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:19,120 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:19,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None
2025-12-09 00:29:20,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:20,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:21,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:21,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:21,542 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:21,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:21,578 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-12-09 00:29:21,578 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:21,580 [ scc.git] DEBUG Check current status
2025-12-09 00:29:21,580 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:21,582 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-12-09 00:29:21,582 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:21,619 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:22,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None
2025-12-09 00:29:22,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:23,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:23,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:23,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:23,902 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:23,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:23,940 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-12-09 00:29:23,940 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:23,942 [ scc.git] DEBUG Check current status
2025-12-09 00:29:23,942 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:23,944 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build
2025-12-09 00:29:23,944 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:23,981 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:24,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None
2025-12-09 00:29:24,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:25,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:25,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:26,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:26,150 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:26,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:26,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-12-09 00:29:26,187 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:26,189 [ scc.git] DEBUG Check current status
2025-12-09 00:29:26,189 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:26,191 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build
2025-12-09 00:29:26,192 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:26,230 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:26,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None
2025-12-09 00:29:27,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:27,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:28,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:28,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:28,660 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:28,696 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:28,696 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-12-09 00:29:28,696 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:28,698 [ scc.git] DEBUG Check current status
2025-12-09 00:29:28,698 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:28,700 [ scc.git] DEBUG bdfeb5e bump sphinx version
2025-12-09 00:29:28,701 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:28,738 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:29,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None
2025-12-09 00:29:29,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:30,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:30,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:30,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:30,934 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:30,970 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:30,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-12-09 00:29:30,971 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:30,973 [ scc.git] DEBUG Check current status
2025-12-09 00:29:30,973 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:30,975 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build
2025-12-09 00:29:30,975 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:31,014 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:31,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None
2025-12-09 00:29:31,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:32,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:32,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:33,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:33,251 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:33,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:33,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-12-09 00:29:33,288 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:33,289 [ scc.git] DEBUG Check current status
2025-12-09 00:29:33,289 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:33,292 [ scc.git] DEBUG 14c1231 Merge pull request #82 from jburel/upgrade_python
2025-12-09 00:29:33,292 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:33,329 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:33,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-12-09 00:29:33,681 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-12-09 00:29:33,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None
2025-12-09 00:29:34,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:34,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:35,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:35,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:35,749 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:35,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:35,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-12-09 00:29:35,785 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:35,787 [ scc.git] DEBUG Check current status
2025-12-09 00:29:35,787 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:35,790 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build
2025-12-09 00:29:35,790 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:35,826 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:36,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None
2025-12-09 00:29:36,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:37,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:37,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:38,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:38,032 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:38,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:38,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-12-09 00:29:38,068 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:38,070 [ scc.git] DEBUG Check current status
2025-12-09 00:29:38,070 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:38,072 [ scc.git] DEBUG 160d894 Fix display of code
2025-12-09 00:29:38,072 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:38,109 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:38,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None
2025-12-09 00:29:39,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:39,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:39,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:40,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:40,359 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:40,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:40,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-12-09 00:29:40,395 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:40,397 [ scc.git] DEBUG Check current status
2025-12-09 00:29:40,397 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:40,399 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1
2025-12-09 00:29:40,400 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:40,436 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:40,436 [ scc.git] DEBUG Repository configuration:
base-branch: main
2025-12-09 00:29:40,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None
2025-12-09 00:29:41,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:41,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:42,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:42,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:42,660 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:42,695 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:42,696 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-12-09 00:29:42,696 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:42,698 [ scc.git] DEBUG Check current status
2025-12-09 00:29:42,698 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:42,700 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build
2025-12-09 00:29:42,700 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:42,736 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:43,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-12-09 00:29:43,090 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-12-09 00:29:43,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None
2025-12-09 00:29:43,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:44,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:44,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:45,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:45,188 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:45,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:45,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-12-09 00:29:45,224 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:45,226 [ scc.git] DEBUG Check current status
2025-12-09 00:29:45,226 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:45,229 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build
2025-12-09 00:29:45,229 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:45,265 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:45,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-12-09 00:29:45,602 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-12-09 00:29:45,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None
2025-12-09 00:29:46,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:46,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:47,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:47,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:47,649 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:47,684 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:47,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-12-09 00:29:47,685 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:47,687 [ scc.git] DEBUG Check current status
2025-12-09 00:29:47,687 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:47,689 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-12-09 00:29:47,689 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:47,726 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:48,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None
2025-12-09 00:29:48,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:49,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:49,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:49,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:49,928 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:49,963 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:49,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-12-09 00:29:49,964 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-12-09 00:29:49,966 [ scc.git] DEBUG Check current status
2025-12-09 00:29:49,966 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:49,968 [ scc.git] DEBUG 18a9a75 Merge pull request #229 from Rdornier/split-view-user-label
2025-12-09 00:29:49,968 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:50,006 [ scc.config] DEBUG Found remote.origin.url
2025-12-09 00:29:50,006 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2025-12-09 00:29:50,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-12-09 00:29:50,368 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-12-09 00:29:50,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None
2025-12-09 00:29:51,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-12-09 00:29:51,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-12-09 00:29:52,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-12-09 00:29:52,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-12-09 00:29:52,426 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:29:52,461 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:29:52,461 [ scc.git] DEBUG Resetting...
2025-12-09 00:29:52,461 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-12-09 00:29:52,467 [ scc.git] DEBUG HEAD is now at 957633b merge master -Dorg -Snone
2025-12-09 00:29:52,467 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-12-09 00:29:52,523 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62'
2025-12-09 00:29:52,548 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2025-12-09 00:29:52,567 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2025-12-09 00:29:52,581 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997'
2025-12-09 00:29:52,603 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73'
2025-12-09 00:29:52,616 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743'
2025-12-09 00:29:52,627 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-12-09 00:29:52,653 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-12-09 00:29:52,656 [ scc.git] DEBUG Check current status
2025-12-09 00:29:52,656 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-12-09 00:29:52,658 [ scc.git] DEBUG 957633b merge master -Dorg -Snone
2025-12-09 00:29:52,658 [ scc.git] DEBUG Calling 'git submodule status'
2025-12-09 00:29:52,700 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-12-09 00:29:52,703 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-12-09 00:29:52,706 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-12-09 00:29:52,709 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-12-09 00:29:52,713 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde)
2025-12-09 00:29:52,716 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-12-09 00:29:52,718 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-12-09 00:29:52,722 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce)
2025-12-09 00:29:52,725 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-12-09 00:29:52,728 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-12-09 00:29:52,730 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-12-09 00:29:52,733 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-12-09 00:29:52,736 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-12-09 00:29:52,739 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-12-09 00:29:52,742 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-12-09 00:29:52,745 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-12-09 00:29:52,747 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-12-09 00:29:52,750 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-12-09 00:29:52,752 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-12-09 00:29:52,755 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-12-09 00:29:52,757 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-12-09 00:29:52,761 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755)
2025-12-09 00:29:52,762 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-12-09 00:29:52,762 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-12-09 00:29:52,762 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-12-09 00:29:52,762 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-12-09 00:29:52,762 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-12-09 00:29:52,762 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-12-09 00:29:52,762 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:29:53,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2025-12-09 00:29:53,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2025-12-09 00:29:53,502 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:29:54,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2025-12-09 00:29:54,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:29:55,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2025-12-09 00:29:55,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:29:55,543 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-12-09 00:29:56,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2025-12-09 00:29:56,025 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:29:56,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2025-12-09 00:29:57,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:29:57,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2025-12-09 00:29:58,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:29:58,025 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-12-09 00:29:58,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2025-12-09 00:29:58,526 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:29:59,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2025-12-09 00:29:59,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:00,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2025-12-09 00:30:00,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:30:00,466 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-12-09 00:30:00,466 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:30:00,467 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:30:00,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:00,469 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:30:00,471 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:30:00,471 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:30:00,474 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:30:00,476 [ scc.git] DEBUG Already up to date.
2025-12-09 00:30:00,476 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2025-12-09 00:30:00,768 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-12-09 00:30:00,768 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2025-12-09 00:30:00,774 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2025-12-09 00:30:01,037 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-12-09 00:30:01,037 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2025-12-09 00:30:01,042 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2025-12-09 00:30:01,315 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-12-09 00:30:01,315 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2025-12-09 00:30:01,321 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:30:01,321 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:30:01,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:01,323 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-12-09 00:30:01,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:01,327 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-12-09 00:30:01,329 [ scc.git] DEBUG Already up to date.
2025-12-09 00:30:01,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:30:01,472 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-12-09 00:30:01,474 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:01,476 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-12-09 00:30:01,478 [ scc.git] DEBUG Already up to date.
2025-12-09 00:30:01,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:30:01,856 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-12-09 00:30:01,858 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:01,860 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-12-09 00:30:01,863 [ scc.git] DEBUG Already up to date.
2025-12-09 00:30:02,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:30:02,281 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:30:02,328 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:30:02,328 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:02,330 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:30:02,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2
2025-12-09 00:30:02,720 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:30:02,720 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-12-09 00:30:02,720 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:30:02,720 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:02,722 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:30:02,724 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:30:02,724 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:30:02,727 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:30:02,729 [ scc.git] DEBUG Already up to date.
2025-12-09 00:30:02,729 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:30:02,729 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:30:02,729 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:02,731 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:30:02,766 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:30:02,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:02,768 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:30:02,803 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:30:02,806 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3695108490> has no local changes
2025-12-09 00:30:02,806 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/minimal-omero-client
Already up to date.
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:30:02,811 [ scc.git] DEBUG [detached HEAD 4c7b496] merge master -Dorg -Ssuccess-only
2025-12-09 00:30:02,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:30:02,812 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:30:03,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None
2025-12-09 00:30:03,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None
2025-12-09 00:30:03,755 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:30:04,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None
2025-12-09 00:30:04,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:05,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:30:05,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None
2025-12-09 00:30:06,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:30:06,506 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:30:06,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None
2025-12-09 00:30:07,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None
2025-12-09 00:30:07,459 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:30:07,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-12-09 00:30:07,459 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:30:07,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:07,461 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:30:07,463 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:30:07,464 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:30:07,466 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:30:07,469 [ scc.git] DEBUG Already up to date.
2025-12-09 00:30:07,469 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head'
2025-12-09 00:30:07,738 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate
2025-12-09 00:30:07,738 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD
2025-12-09 00:30:07,742 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:30:07,742 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:30:07,742 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:07,745 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4'
2025-12-09 00:30:07,747 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:07,749 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4'
2025-12-09 00:30:07,755 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:30:07,758 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-12-09 00:30:07,758 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-12-09 00:30:07,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:30:07,897 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:30:07,932 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:30:07,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:07,934 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:30:07,971 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:30:07,974 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3695167210> has no local changes
2025-12-09 00:30:07,974 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:30:07,979 [ scc.git] DEBUG [detached HEAD 551d722] merge master -Dorg -Ssuccess-only
2025-12-09 00:30:07,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:30:07,980 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:30:08,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None
2025-12-09 00:30:08,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/75 HTTP/1.1" 200 None
2025-12-09 00:30:09,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/48b74b978c3ae2e789b119329935f57852988e19 HTTP/1.1" 200 None
2025-12-09 00:30:10,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/48b74b978c3ae2e789b119329935f57852988e19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:10,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/48b74b978c3ae2e789b119329935f57852988e19/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:30:11,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/48b74b978c3ae2e789b119329935f57852988e19 HTTP/1.1" 200 None
2025-12-09 00:30:11,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/48b74b978c3ae2e789b119329935f57852988e19?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:30:11,540 [ scc.repo] DEBUG - PR 75 jburel 'Sort the new channels to ensure settings are set'
2025-12-09 00:30:12,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/74 HTTP/1.1" 200 None
2025-12-09 00:30:12,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/74/comments HTTP/1.1" 200 None
2025-12-09 00:30:12,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/4fd0721053daa1b9f80f12fb6e2e9b92e382642f HTTP/1.1" 200 None
2025-12-09 00:30:13,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/4fd0721053daa1b9f80f12fb6e2e9b92e382642f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:14,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/4fd0721053daa1b9f80f12fb6e2e9b92e382642f/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:30:14,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/4fd0721053daa1b9f80f12fb6e2e9b92e382642f HTTP/1.1" 200 None
2025-12-09 00:30:14,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/4fd0721053daa1b9f80f12fb6e2e9b92e382642f?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:30:14,897 [ scc.repo] DEBUG - PR 74 jburel 'Replace manual changelog by automated GH release step'
2025-12-09 00:30:15,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None
2025-12-09 00:30:15,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None
2025-12-09 00:30:16,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:16,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None
2025-12-09 00:30:17,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:30:17,357 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names'
2025-12-09 00:30:17,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None
2025-12-09 00:30:18,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None
2025-12-09 00:30:18,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:19,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:30:19,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None
2025-12-09 00:30:20,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:30:20,194 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands'
2025-12-09 00:30:20,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None
2025-12-09 00:30:21,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None
2025-12-09 00:30:21,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None
2025-12-09 00:30:22,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:22,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:30:23,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None
2025-12-09 00:30:23,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:30:23,853 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate'
2025-12-09 00:30:24,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None
2025-12-09 00:30:24,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None
2025-12-09 00:30:24,810 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:30:24,810 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-12-09 00:30:24,810 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:30:24,810 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:24,812 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:30:24,814 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:30:24,814 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:30:24,817 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:30:24,820 [ scc.git] DEBUG Already up to date.
2025-12-09 00:30:24,820 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head'
2025-12-09 00:30:25,089 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-12-09 00:30:25,090 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD
2025-12-09 00:30:25,094 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2025-12-09 00:30:25,352 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-12-09 00:30:25,352 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2025-12-09 00:30:25,356 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head'
2025-12-09 00:30:25,609 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-12-09 00:30:25,609 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD
2025-12-09 00:30:25,613 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2025-12-09 00:30:25,871 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-12-09 00:30:25,872 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2025-12-09 00:30:25,876 [ scc.git] DEBUG Calling 'git fetch origin pull/75/head'
2025-12-09 00:30:26,137 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-12-09 00:30:26,137 [ scc.git] DEBUG * branch refs/pull/75/head -> FETCH_HEAD
2025-12-09 00:30:26,141 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:30:26,141 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:30:26,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:26,143 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a'
2025-12-09 00:30:26,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:26,148 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a'
2025-12-09 00:30:26,156 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:30:26,159 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++---------------------
2025-12-09 00:30:26,159 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-)
2025-12-09 00:30:26,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:30:26,306 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22'
2025-12-09 00:30:26,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:26,312 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22'
2025-12-09 00:30:26,320 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-12-09 00:30:26,320 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:30:26,323 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++--------
2025-12-09 00:30:26,323 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-)
2025-12-09 00:30:26,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:30:26,708 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6'
2025-12-09 00:30:26,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:26,713 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6'
2025-12-09 00:30:26,722 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-12-09 00:30:26,722 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:30:26,726 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++-------
2025-12-09 00:30:26,726 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-)
2025-12-09 00:30:27,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:30:27,129 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4fd0721053daa1b9f80f12fb6e2e9b92e382642f'
2025-12-09 00:30:27,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:27,135 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Replace manual changelog by automated GH release step) 4fd0721053daa1b9f80f12fb6e2e9b92e382642f'
2025-12-09 00:30:27,143 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:30:27,146 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 7 ++-
2025-12-09 00:30:27,146 [ scc.git] DEBUG CHANGES.md | 118 -------------------------------------
2025-12-09 00:30:27,146 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 119 deletions(-)
2025-12-09 00:30:27,146 [ scc.git] DEBUG delete mode 100644 CHANGES.md
2025-12-09 00:30:27,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:30:27,521 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...48b74b978c3ae2e789b119329935f57852988e19'
2025-12-09 00:30:27,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:27,526 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 75 (Sort the new channels to ensure settings are set) 48b74b978c3ae2e789b119329935f57852988e19'
2025-12-09 00:30:27,534 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-12-09 00:30:27,535 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:30:27,538 [ scc.git] DEBUG src/omero_cli_render.py | 5 +++--
2025-12-09 00:30:27,538 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 2 deletions(-)
2025-12-09 00:30:27,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:30:27,911 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:30:27,948 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:30:27,948 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:27,951 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:30:27,987 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:30:27,990 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36951e6890> has no local changes
2025-12-09 00:30:27,990 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-render
Excluded PRs:
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
- PR 74 jburel 'Replace manual changelog by automated GH release step'
- PR 75 jburel 'Sort the new channels to ensure settings are set'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:30:27,996 [ scc.git] DEBUG [detached HEAD b391518] merge master -Dorg -Ssuccess-only
2025-12-09 00:30:27,997 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:30:27,997 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:30:28,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None
2025-12-09 00:30:29,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/186 HTTP/1.1" 200 None
2025-12-09 00:30:29,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2 HTTP/1.1" 200 None
2025-12-09 00:30:30,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:30,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:30:31,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2 HTTP/1.1" 200 None
2025-12-09 00:30:31,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2?per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:32,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2 HTTP/1.1" 200 None
2025-12-09 00:30:32,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2/status HTTP/1.1" 200 None
2025-12-09 00:30:32,617 [ scc.repo] DEBUG - PR 186 jburel 'Create release from tag'
2025-12-09 00:30:33,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None
2025-12-09 00:30:33,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None
2025-12-09 00:30:34,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None
2025-12-09 00:30:34,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:35,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:30:35,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None
2025-12-09 00:30:35,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:36,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None
2025-12-09 00:30:36,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None
2025-12-09 00:30:36,996 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"'
2025-12-09 00:30:37,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None
2025-12-09 00:30:38,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None
2025-12-09 00:30:38,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None
2025-12-09 00:30:39,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:39,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:30:40,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None
2025-12-09 00:30:40,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b1ec9c408dd417886a980e3368c0d82bfefe491d?per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:41,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None
2025-12-09 00:30:41,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/status HTTP/1.1" 200 None
2025-12-09 00:30:41,619 [ scc.repo] DEBUG - PR 181 will-moore 'Add labels support for import'
2025-12-09 00:30:42,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None
2025-12-09 00:30:42,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None
2025-12-09 00:30:43,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-12-09 00:30:43,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:44,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:30:44,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-12-09 00:30:45,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:45,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-12-09 00:30:46,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None
2025-12-09 00:30:46,013 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-12-09 00:30:46,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None
2025-12-09 00:30:46,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None
2025-12-09 00:30:47,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None
2025-12-09 00:30:48,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:48,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:30:49,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None
2025-12-09 00:30:49,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:50,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None
2025-12-09 00:30:50,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None
2025-12-09 00:30:50,521 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells'
2025-12-09 00:30:50,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None
2025-12-09 00:30:51,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None
2025-12-09 00:30:51,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f HTTP/1.1" 200 None
2025-12-09 00:30:52,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:30:52,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:30:53,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None
2025-12-09 00:30:53,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None
2025-12-09 00:30:54,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None
2025-12-09 00:30:54,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None
2025-12-09 00:30:55,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None
2025-12-09 00:30:55,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None
2025-12-09 00:30:56,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None
2025-12-09 00:30:56,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None
2025-12-09 00:30:57,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None
2025-12-09 00:30:57,457 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:30:57,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-12-09 00:30:57,457 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:30:57,457 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:30:57,460 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:30:57,462 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:30:57,462 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:30:57,465 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:30:57,478 [ scc.git] DEBUG Updating 11d3587..37ea700
2025-12-09 00:30:58,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None
2025-12-09 00:30:58,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None
2025-12-09 00:30:59,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None
2025-12-09 00:31:00,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None
2025-12-09 00:31:00,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None
2025-12-09 00:31:01,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None
2025-12-09 00:31:02,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None
2025-12-09 00:31:03,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None
2025-12-09 00:31:03,002 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head'
2025-12-09 00:31:03,286 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-12-09 00:31:03,286 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD
2025-12-09 00:31:03,290 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head'
2025-12-09 00:31:03,568 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-12-09 00:31:03,568 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD
2025-12-09 00:31:03,573 [ scc.git] DEBUG Calling 'git fetch origin pull/181/head'
2025-12-09 00:31:03,827 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-12-09 00:31:03,827 [ scc.git] DEBUG * branch refs/pull/181/head -> FETCH_HEAD
2025-12-09 00:31:03,831 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head'
2025-12-09 00:31:04,086 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-12-09 00:31:04,086 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD
2025-12-09 00:31:04,091 [ scc.git] DEBUG Calling 'git fetch origin pull/186/head'
2025-12-09 00:31:04,349 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-12-09 00:31:04,349 [ scc.git] DEBUG * branch refs/pull/186/head -> FETCH_HEAD
2025-12-09 00:31:04,353 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:31:04,353 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:31:04,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:04,355 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c'
2025-12-09 00:31:04,359 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:04,361 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c'
2025-12-09 00:31:04,371 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:31:04,374 [ scc.git] DEBUG README.rst | 14 ++
2025-12-09 00:31:04,374 [ scc.git] DEBUG src/omero_zarr/cli.py | 66 +++++----
2025-12-09 00:31:04,374 [ scc.git] DEBUG src/omero_zarr/kvp_tables.py | 82 +++++++++++
2025-12-09 00:31:04,374 [ scc.git] DEBUG src/omero_zarr/masks.py | 46 ++++--
2025-12-09 00:31:04,374 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 51 +++++--
2025-12-09 00:31:04,374 [ scc.git] DEBUG src/omero_zarr/util.py | 49 ++++++-
2025-12-09 00:31:04,375 [ scc.git] DEBUG test/integration/clitest/test_export.py | 251 +++++++++++++++++++++++---------
2025-12-09 00:31:04,375 [ scc.git] DEBUG 7 files changed, 443 insertions(+), 116 deletions(-)
2025-12-09 00:31:04,375 [ scc.git] DEBUG create mode 100644 src/omero_zarr/kvp_tables.py
2025-12-09 00:31:04,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:31:04,517 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-12-09 00:31:04,520 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:04,522 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-12-09 00:31:04,532 [ scc.git] DEBUG Auto-merging CHANGELOG.md
2025-12-09 00:31:04,532 [ scc.git] DEBUG CONFLICT (content): Merge conflict in CHANGELOG.md
2025-12-09 00:31:04,532 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2025-12-09 00:31:04,532 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py
2025-12-09 00:31:04,532 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py
2025-12-09 00:31:04,532 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py
2025-12-09 00:31:04,532 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-12-09 00:31:04,533 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-12-09 00:31:04,535 [ scc.git] DEBUG Calling 'git reset --hard 607dd1171b61ce69421aa9f5a94cb55b3f4c4caa'
2025-12-09 00:31:04,540 [ scc.git] DEBUG HEAD is now at 607dd11 merge master -Dorg -Ssuccess-only: PR 174 (Skip wells)
2025-12-09 00:31:04,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:31:04,919 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-12-09 00:31:04,922 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..37ea7000309b4f8b87c5122c138fb59b17ecf86b'
2025-12-09 00:31:04,925 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Conflicting PR. Removed from build [OMERO-plugins-push#597](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/consoleText) for more details.
Possible conflicts:
- PR #174 will-moore 'Skip wells'
- test/integration/clitest/test_export.py
- src/omero_zarr/masks.py
- Upstream changes
- CHANGELOG.md
--conflicts
2025-12-09 00:31:04,927 [ scc.config] DEBUG Found github.token
2025-12-09 00:31:04,927 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts.
2025-12-09 00:31:04,927 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b1ec9c408dd417886a980e3368c0d82bfefe491d'
2025-12-09 00:31:04,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:04,933 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) b1ec9c408dd417886a980e3368c0d82bfefe491d'
2025-12-09 00:31:04,941 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py
2025-12-09 00:31:04,942 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:31:04,946 [ scc.git] DEBUG src/omero_zarr/cli.py | 4 +
2025-12-09 00:31:04,946 [ scc.git] DEBUG src/omero_zarr/import_labels.py | 196 ++++++++++++++++++++++++++++++++
2025-12-09 00:31:04,946 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 7 ++
2025-12-09 00:31:04,946 [ scc.git] DEBUG test/integration/clitest/test_import.py | 19 ++++
2025-12-09 00:31:04,946 [ scc.git] DEBUG 4 files changed, 226 insertions(+)
2025-12-09 00:31:04,946 [ scc.git] DEBUG create mode 100644 src/omero_zarr/import_labels.py
2025-12-09 00:31:05,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:31:05,306 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac'
2025-12-09 00:31:05,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:05,312 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac'
2025-12-09 00:31:05,321 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py
2025-12-09 00:31:05,321 [ scc.git] DEBUG Auto-merging src/omero_zarr/import_labels.py
2025-12-09 00:31:05,321 [ scc.git] DEBUG CONFLICT (add/add): Merge conflict in src/omero_zarr/import_labels.py
2025-12-09 00:31:05,321 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py
2025-12-09 00:31:05,321 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-12-09 00:31:05,322 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-12-09 00:31:05,324 [ scc.git] DEBUG Calling 'git reset --hard 0a87ea5e32f481ccae71d014ee11a3f109715f73'
2025-12-09 00:31:05,328 [ scc.git] DEBUG HEAD is now at 0a87ea5 merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import)
2025-12-09 00:31:05,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:31:05,710 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac'
2025-12-09 00:31:05,713 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b'
2025-12-09 00:31:05,715 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"'
Conflicting PR. Removed from build [OMERO-plugins-push#597](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/consoleText) for more details.
Possible conflicts:
- PR #181 will-moore 'Add labels support for import'
- src/omero_zarr/import_labels.py
--conflicts
2025-12-09 00:31:05,717 [ scc.config] DEBUG Found github.token
2025-12-09 00:31:05,717 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts.
2025-12-09 00:31:05,718 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2'
2025-12-09 00:31:05,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:05,723 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 186 (Create release from tag) e5b25ec39ee9f3c165e28235cb28f3aa0c45d5e2'
2025-12-09 00:31:05,731 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:31:05,733 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 7 ++++++-
2025-12-09 00:31:05,733 [ scc.git] DEBUG CHANGELOG.md | 41 --------------------------------------
2025-12-09 00:31:05,733 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 42 deletions(-)
2025-12-09 00:31:05,733 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md
2025-12-09 00:31:06,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:31:06,154 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:31:06,192 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:31:06,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:06,194 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:31:06,230 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:31:06,233 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3695218690> has no local changes
2025-12-09 00:31:06,233 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..37ea700
Previously merged:
- PR 180 will-moore 'Import command'
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 174 will-moore 'Skip wells'
- PR 181 will-moore 'Add labels support for import'
- PR 186 jburel 'Create release from tag'
Conflicting PRs (not included):
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
- PR 182 will-moore 'Revert "Remove support for Plate import"'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:31:06,239 [ scc.git] DEBUG [detached HEAD 4728e5b] merge master -Dorg -Ssuccess-only
2025-12-09 00:31:06,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:31:06,239 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:31:06,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None
2025-12-09 00:31:07,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/653 HTTP/1.1" 200 None
2025-12-09 00:31:07,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None
2025-12-09 00:31:07,813 [ scc.repo] DEBUG # ... Include label: include
2025-12-09 00:31:08,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None
2025-12-09 00:31:08,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:31:09,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:31:09,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None
2025-12-09 00:31:10,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:31:10,154 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 '
2025-12-09 00:31:10,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/651 HTTP/1.1" 200 None
2025-12-09 00:31:11,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/651/comments HTTP/1.1" 200 None
2025-12-09 00:31:11,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/650 HTTP/1.1" 200 None
2025-12-09 00:31:12,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1d609d2cb61fc389612ebefe30172b76e73b87aa HTTP/1.1" 200 None
2025-12-09 00:31:12,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1d609d2cb61fc389612ebefe30172b76e73b87aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:31:13,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1d609d2cb61fc389612ebefe30172b76e73b87aa/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:31:13,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1d609d2cb61fc389612ebefe30172b76e73b87aa HTTP/1.1" 200 None
2025-12-09 00:31:14,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/1d609d2cb61fc389612ebefe30172b76e73b87aa?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:31:14,201 [ scc.repo] DEBUG - PR 650 jburel 'Bump Python version'
2025-12-09 00:31:14,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/649 HTTP/1.1" 200 None
2025-12-09 00:31:15,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/649/comments HTTP/1.1" 200 None
2025-12-09 00:31:15,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c481ecdb1b184268c7b8a9b1749838da27127e83 HTTP/1.1" 200 None
2025-12-09 00:31:16,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c481ecdb1b184268c7b8a9b1749838da27127e83/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:31:16,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c481ecdb1b184268c7b8a9b1749838da27127e83/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:31:17,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c481ecdb1b184268c7b8a9b1749838da27127e83 HTTP/1.1" 200 None
2025-12-09 00:31:17,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c481ecdb1b184268c7b8a9b1749838da27127e83?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:31:17,472 [ scc.repo] DEBUG - PR 649 jburel 'Replace manual changelog by automated GH release step'
2025-12-09 00:31:17,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/648 HTTP/1.1" 200 None
2025-12-09 00:31:18,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/648/comments HTTP/1.1" 200 None
2025-12-09 00:31:18,423 [ scc.repo] DEBUG # ... Include label: include
2025-12-09 00:31:18,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bff16e3da46183680038873fa6415eb02e212113 HTTP/1.1" 200 None
2025-12-09 00:31:19,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bff16e3da46183680038873fa6415eb02e212113/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:31:20,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bff16e3da46183680038873fa6415eb02e212113/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:31:20,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bff16e3da46183680038873fa6415eb02e212113 HTTP/1.1" 200 None
2025-12-09 00:31:21,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/bff16e3da46183680038873fa6415eb02e212113?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:31:21,013 [ scc.repo] DEBUG - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540'
2025-12-09 00:31:21,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/647 HTTP/1.1" 200 None
2025-12-09 00:31:21,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643 HTTP/1.1" 200 None
2025-12-09 00:31:22,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643/comments HTTP/1.1" 200 None
2025-12-09 00:31:22,441 [ scc.repo] DEBUG # ... Include label: include
2025-12-09 00:31:22,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c1ef89b420677b483d223fc7ec13c116e9f0c5f5 HTTP/1.1" 200 None
2025-12-09 00:31:23,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c1ef89b420677b483d223fc7ec13c116e9f0c5f5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:31:23,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c1ef89b420677b483d223fc7ec13c116e9f0c5f5/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:31:24,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c1ef89b420677b483d223fc7ec13c116e9f0c5f5 HTTP/1.1" 200 None
2025-12-09 00:31:24,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c1ef89b420677b483d223fc7ec13c116e9f0c5f5?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:31:24,854 [ scc.repo] DEBUG - PR 643 Rdornier 'Shape scaling'
2025-12-09 00:31:25,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None
2025-12-09 00:31:25,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None
2025-12-09 00:31:26,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None
2025-12-09 00:31:26,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None
2025-12-09 00:31:26,846 [ scc.repo] DEBUG # ... Include label: include
2025-12-09 00:31:27,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8a77378453ff0c94e6a83bd3146342654333f5e0 HTTP/1.1" 200 None
2025-12-09 00:31:27,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8a77378453ff0c94e6a83bd3146342654333f5e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:31:28,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8a77378453ff0c94e6a83bd3146342654333f5e0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:31:28,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8a77378453ff0c94e6a83bd3146342654333f5e0 HTTP/1.1" 200 None
2025-12-09 00:31:29,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8a77378453ff0c94e6a83bd3146342654333f5e0?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:31:29,378 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position'
2025-12-09 00:31:30,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None
2025-12-09 00:31:30,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None
2025-12-09 00:31:31,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None
2025-12-09 00:31:31,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/600/comments?page=2 HTTP/1.1" 200 None
2025-12-09 00:31:31,529 [ scc.repo] DEBUG # ... Include label: include
2025-12-09 00:31:32,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/698c1cb448e28cea0e3fe03aad3eb614b76d26d0 HTTP/1.1" 200 None
2025-12-09 00:31:32,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/698c1cb448e28cea0e3fe03aad3eb614b76d26d0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:31:33,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/698c1cb448e28cea0e3fe03aad3eb614b76d26d0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:31:33,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/698c1cb448e28cea0e3fe03aad3eb614b76d26d0 HTTP/1.1" 200 None
2025-12-09 00:31:33,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/698c1cb448e28cea0e3fe03aad3eb614b76d26d0?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:31:34,000 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois'
2025-12-09 00:31:34,001 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:31:34,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-12-09 00:31:34,001 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:31:34,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:34,004 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:31:34,007 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:31:34,007 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:31:34,011 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:31:34,036 [ scc.git] DEBUG Updating 9cc36cde..691a9a60
2025-12-09 00:31:34,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None
2025-12-09 00:31:35,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None
2025-12-09 00:31:35,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None
2025-12-09 00:31:36,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None
2025-12-09 00:31:37,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None
2025-12-09 00:31:38,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None
2025-12-09 00:31:38,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None
2025-12-09 00:31:39,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None
2025-12-09 00:31:40,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None
2025-12-09 00:31:40,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None
2025-12-09 00:31:41,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None
2025-12-09 00:31:42,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None
2025-12-09 00:31:42,221 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head'
2025-12-09 00:31:42,494 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-12-09 00:31:42,494 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD
2025-12-09 00:31:42,498 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head'
2025-12-09 00:31:42,761 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-12-09 00:31:42,761 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD
2025-12-09 00:31:42,766 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head'
2025-12-09 00:31:43,037 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-12-09 00:31:43,037 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD
2025-12-09 00:31:43,042 [ scc.git] DEBUG Calling 'git fetch origin pull/648/head'
2025-12-09 00:31:43,298 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-12-09 00:31:43,298 [ scc.git] DEBUG * branch refs/pull/648/head -> FETCH_HEAD
2025-12-09 00:31:43,304 [ scc.git] DEBUG Calling 'git fetch origin pull/649/head'
2025-12-09 00:31:43,563 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-12-09 00:31:43,563 [ scc.git] DEBUG * branch refs/pull/649/head -> FETCH_HEAD
2025-12-09 00:31:43,567 [ scc.git] DEBUG Calling 'git fetch origin pull/650/head'
2025-12-09 00:31:43,839 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-12-09 00:31:43,839 [ scc.git] DEBUG * branch refs/pull/650/head -> FETCH_HEAD
2025-12-09 00:31:43,843 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head'
2025-12-09 00:31:44,109 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-12-09 00:31:44,110 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD
2025-12-09 00:31:44,114 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:31:44,114 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:31:44,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:44,116 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...698c1cb448e28cea0e3fe03aad3eb614b76d26d0'
2025-12-09 00:31:44,123 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:44,125 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 698c1cb448e28cea0e3fe03aad3eb614b76d26d0'
2025-12-09 00:31:44,146 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:31:44,155 [ scc.git] DEBUG .gitignore | 2 +
2025-12-09 00:31:44,155 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 351 ++++++++-
2025-12-09 00:31:44,155 [ scc.git] DEBUG src/css/figure.css | 18 +-
2025-12-09 00:31:44,155 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes
2025-12-09 00:31:44,155 [ scc.git] DEBUG src/index.html | 44 +-
2025-12-09 00:31:44,155 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +-
2025-12-09 00:31:44,155 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +-
2025-12-09 00:31:44,156 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 213 +++++-
2025-12-09 00:31:44,156 [ scc.git] DEBUG src/js/shape_editor/line.js | 220 +++++-
2025-12-09 00:31:44,156 [ scc.git] DEBUG src/js/shape_editor/point.js | 208 +++++-
2025-12-09 00:31:44,156 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 212 +++++-
2025-12-09 00:31:44,156 [ scc.git] DEBUG src/js/shape_editor/rect.js | 217 +++++-
2025-12-09 00:31:44,156 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 427 ++++++++++-
2025-12-09 00:31:44,156 [ scc.git] DEBUG src/js/shape_editor/text.js | 812 +++++++++++++++++++++
2025-12-09 00:31:44,156 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +-
2025-12-09 00:31:44,156 [ scc.git] DEBUG src/js/views/right_panel_view.js | 125 +++-
2025-12-09 00:31:44,156 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +-
2025-12-09 00:31:44,157 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 200 ++++-
2025-12-09 00:31:44,157 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +-
2025-12-09 00:31:44,157 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +-
2025-12-09 00:31:44,157 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++
2025-12-09 00:31:44,157 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 +++++++---
2025-12-09 00:31:44,157 [ scc.git] DEBUG 22 files changed, 3445 insertions(+), 235 deletions(-)
2025-12-09 00:31:44,157 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png
2025-12-09 00:31:44,157 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js
2025-12-09 00:31:44,157 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html
2025-12-09 00:31:44,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:31:44,336 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8a77378453ff0c94e6a83bd3146342654333f5e0'
2025-12-09 00:31:44,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:44,346 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) 8a77378453ff0c94e6a83bd3146342654333f5e0'
2025-12-09 00:31:44,372 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-12-09 00:31:44,372 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-12-09 00:31:44,372 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js
2025-12-09 00:31:44,372 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html
2025-12-09 00:31:44,372 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html
2025-12-09 00:31:44,373 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-12-09 00:31:44,373 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-12-09 00:31:44,379 [ scc.git] DEBUG Calling 'git reset --hard 7aec10cb9bd4067ec5b54a52abdb9f5f23bcbd40'
2025-12-09 00:31:44,389 [ scc.git] DEBUG HEAD is now at 7aec10cb merge master -Dorg -Ssuccess-only: PR 600 (Label on rois)
2025-12-09 00:31:44,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:31:44,799 [ scc.git] DEBUG Calling 'git merge-base 691a9a60c01bcce1f01f90d528584cb6e68124f9 8a77378453ff0c94e6a83bd3146342654333f5e0'
2025-12-09 00:31:44,804 [ scc.git] DEBUG Calling 'git diff --name-only 691a9a60c01bcce1f01f90d528584cb6e68124f9..691a9a60c01bcce1f01f90d528584cb6e68124f9'
2025-12-09 00:31:44,807 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position'
Conflicting PR. Removed from build [OMERO-plugins-push#597](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/templates/scalebar_form.template.html
--conflicts
2025-12-09 00:31:44,810 [ scc.config] DEBUG Found github.token
2025-12-09 00:31:44,810 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts.
2025-12-09 00:31:44,810 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c1ef89b420677b483d223fc7ec13c116e9f0c5f5'
2025-12-09 00:31:44,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:44,820 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Shape scaling) c1ef89b420677b483d223fc7ec13c116e9f0c5f5'
2025-12-09 00:31:44,846 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js
2025-12-09 00:31:44,846 [ scc.git] DEBUG Auto-merging src/js/shape_editor/line.js
2025-12-09 00:31:44,846 [ scc.git] DEBUG Auto-merging src/js/shape_editor/point.js
2025-12-09 00:31:44,846 [ scc.git] DEBUG Auto-merging src/js/shape_editor/polygon.js
2025-12-09 00:31:44,846 [ scc.git] DEBUG Auto-merging src/js/shape_editor/rect.js
2025-12-09 00:31:44,846 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/rect.js
2025-12-09 00:31:44,846 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js
2025-12-09 00:31:44,846 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/shape_manager.js
2025-12-09 00:31:44,846 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js
2025-12-09 00:31:44,846 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-12-09 00:31:44,847 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-12-09 00:31:44,852 [ scc.git] DEBUG Calling 'git reset --hard 7aec10cb9bd4067ec5b54a52abdb9f5f23bcbd40'
2025-12-09 00:31:44,863 [ scc.git] DEBUG HEAD is now at 7aec10cb merge master -Dorg -Ssuccess-only: PR 600 (Label on rois)
2025-12-09 00:31:45,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:31:45,195 [ scc.git] DEBUG Calling 'git merge-base 691a9a60c01bcce1f01f90d528584cb6e68124f9 c1ef89b420677b483d223fc7ec13c116e9f0c5f5'
2025-12-09 00:31:45,199 [ scc.git] DEBUG Calling 'git diff --name-only 691a9a60c01bcce1f01f90d528584cb6e68124f9..691a9a60c01bcce1f01f90d528584cb6e68124f9'
2025-12-09 00:31:45,203 [ scc.git] INFO - PR 643 Rdornier 'Shape scaling'
Conflicting PR. Removed from build [OMERO-plugins-push#597](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/js/shape_editor/shape_manager.js
- src/js/shape_editor/rect.js
--conflicts
2025-12-09 00:31:45,205 [ scc.config] DEBUG Found github.token
2025-12-09 00:31:45,205 [ scc.git] DEBUG Not adding comment to issue #643, already --conflicts.
2025-12-09 00:31:45,205 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bff16e3da46183680038873fa6415eb02e212113'
2025-12-09 00:31:45,212 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:45,214 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 648 (Add well and field label for high-content screening data, fixes #540) bff16e3da46183680038873fa6415eb02e212113'
2025-12-09 00:31:45,244 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-12-09 00:31:45,245 [ scc.git] DEBUG Auto-merging omero_figure/urls.py
2025-12-09 00:31:45,245 [ scc.git] DEBUG Auto-merging omero_figure/views.py
2025-12-09 00:31:45,245 [ scc.git] DEBUG Auto-merging src/index.html
2025-12-09 00:31:45,245 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js
2025-12-09 00:31:45,245 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js
2025-12-09 00:31:45,245 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js
2025-12-09 00:31:45,245 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:31:45,252 [ scc.git] DEBUG omero_figure/omeroutils.py | 13 +++++
2025-12-09 00:31:45,252 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 63 ++++++++++++++++++++++
2025-12-09 00:31:45,252 [ scc.git] DEBUG omero_figure/urls.py | 4 ++
2025-12-09 00:31:45,252 [ scc.git] DEBUG omero_figure/views.py | 34 +++++++++++-
2025-12-09 00:31:45,252 [ scc.git] DEBUG src/index.html | 20 +++++++
2025-12-09 00:31:45,252 [ scc.git] DEBUG src/js/models/panel_model.js | 30 +++++++++++
2025-12-09 00:31:45,252 [ scc.git] DEBUG src/js/views/panel_view.js | 11 +++-
2025-12-09 00:31:45,252 [ scc.git] DEBUG src/js/views/right_panel_view.js | 13 +++++
2025-12-09 00:31:45,252 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 1 +
2025-12-09 00:31:45,252 [ scc.git] DEBUG 9 files changed, 186 insertions(+), 3 deletions(-)
2025-12-09 00:31:45,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:31:45,592 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c481ecdb1b184268c7b8a9b1749838da27127e83'
2025-12-09 00:31:45,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:45,602 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 649 (Replace manual changelog by automated GH release step) c481ecdb1b184268c7b8a9b1749838da27127e83'
2025-12-09 00:31:45,619 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:31:45,623 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 +
2025-12-09 00:31:45,624 [ scc.git] DEBUG CHANGELOG.md | 388 -------------------------------------
2025-12-09 00:31:45,624 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 388 deletions(-)
2025-12-09 00:31:45,624 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md
2025-12-09 00:31:45,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:31:45,989 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1d609d2cb61fc389612ebefe30172b76e73b87aa'
2025-12-09 00:31:45,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:45,999 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 650 (Bump Python version) 1d609d2cb61fc389612ebefe30172b76e73b87aa'
2025-12-09 00:31:46,014 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml
2025-12-09 00:31:46,015 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:31:46,019 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 6 +++---
2025-12-09 00:31:46,019 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2025-12-09 00:31:46,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:31:46,385 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234'
2025-12-09 00:31:46,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:46,396 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234'
2025-12-09 00:31:46,418 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-12-09 00:31:46,418 [ scc.git] DEBUG Auto-merging src/index.html
2025-12-09 00:31:46,418 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js
2025-12-09 00:31:46,418 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:31:46,424 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++-
2025-12-09 00:31:46,424 [ scc.git] DEBUG src/index.html | 11 ++
2025-12-09 00:31:46,424 [ scc.git] DEBUG src/js/views/figure_view.js | 1 +
2025-12-09 00:31:46,424 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-)
2025-12-09 00:31:46,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:31:46,795 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:31:46,835 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:31:46,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:46,838 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:31:46,873 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:31:46,878 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36950fb750> has no local changes
2025-12-09 00:31:46,879 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-figure
Excluded PRs:
- PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' (user: Nirkan)
- PR 651 Rdornier 'More compliant align to grid' (user: Rdornier)
- PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' (user: Rdornier)
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
Updating 9cc36cde..691a9a60
Previously merged:
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
- PR 646 JensWendt 'fix word wrap of image names'
- PR 612 will-moore 'Script version'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 616 Rdornier 'Fix labels around border'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540'
- PR 649 jburel 'Replace manual changelog by automated GH release step'
- PR 650 jburel 'Bump Python version'
- PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 '
Conflicting PRs (not included):
- PR 637 Rdornier 'Fix scalebar position'
- PR 643 Rdornier 'Shape scaling'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:31:46,888 [ scc.git] DEBUG [detached HEAD fb42728a] merge master -Dorg -Ssuccess-only
2025-12-09 00:31:46,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:31:46,888 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:31:47,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2025-12-09 00:31:47,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None
2025-12-09 00:31:47,897 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:31:48,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None
2025-12-09 00:31:49,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:31:49,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:31:50,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None
2025-12-09 00:31:50,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:31:50,603 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:31:51,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2025-12-09 00:31:51,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2025-12-09 00:31:52,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2025-12-09 00:31:52,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:31:53,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2025-12-09 00:31:53,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:31:53,441 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2025-12-09 00:31:53,442 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:31:53,442 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-12-09 00:31:53,442 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:31:53,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:53,444 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:31:53,446 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:31:53,446 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:31:53,449 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:31:53,452 [ scc.git] DEBUG Already up to date.
2025-12-09 00:31:53,452 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2025-12-09 00:31:53,721 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2025-12-09 00:31:53,721 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2025-12-09 00:31:53,725 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head'
2025-12-09 00:31:53,976 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2025-12-09 00:31:53,976 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD
2025-12-09 00:31:53,980 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:31:53,980 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:31:53,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:53,983 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2025-12-09 00:31:53,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:53,988 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2025-12-09 00:31:53,994 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2025-12-09 00:31:53,995 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:31:53,998 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2025-12-09 00:31:53,998 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2025-12-09 00:31:54,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:31:54,148 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c'
2025-12-09 00:31:54,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:54,153 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c'
2025-12-09 00:31:54,160 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:31:54,163 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-12-09 00:31:54,163 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-12-09 00:31:54,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:31:54,545 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:31:54,582 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:31:54,582 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:31:54,584 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:31:54,619 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:31:54,623 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3695190a10> has no local changes
2025-12-09 00:31:54,623 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
- PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:31:54,628 [ scc.git] DEBUG [detached HEAD f3d18b0] merge master -Dorg -Ssuccess-only
2025-12-09 00:31:54,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:31:54,628 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:31:55,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2025-12-09 00:31:55,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None
2025-12-09 00:31:56,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None
2025-12-09 00:31:56,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None
2025-12-09 00:31:56,553 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:31:57,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2025-12-09 00:31:57,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:31:58,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:31:58,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2025-12-09 00:31:59,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:31:59,083 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-12-09 00:31:59,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None
2025-12-09 00:32:00,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None
2025-12-09 00:32:00,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None
2025-12-09 00:32:00,569 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:32:01,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2025-12-09 00:32:01,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:32:02,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:32:02,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2025-12-09 00:32:03,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:32:03,137 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-12-09 00:32:03,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None
2025-12-09 00:32:03,626 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:32:04,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2025-12-09 00:32:04,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:32:05,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:32:05,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2025-12-09 00:32:06,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:32:06,203 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-12-09 00:32:06,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None
2025-12-09 00:32:06,707 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:32:07,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2025-12-09 00:32:07,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:32:08,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:32:08,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2025-12-09 00:32:09,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:32:09,231 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-12-09 00:32:09,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None
2025-12-09 00:32:10,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None
2025-12-09 00:32:10,159 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:32:10,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2025-12-09 00:32:11,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:32:11,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:32:12,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2025-12-09 00:32:12,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:32:12,791 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-12-09 00:32:13,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None
2025-12-09 00:32:13,328 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:32:13,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2025-12-09 00:32:14,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:32:14,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:32:15,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2025-12-09 00:32:15,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:32:15,915 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-12-09 00:32:16,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None
2025-12-09 00:32:16,432 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:32:17,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2025-12-09 00:32:17,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:32:18,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:32:18,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2025-12-09 00:32:19,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:32:19,061 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-12-09 00:32:19,061 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:32:19,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-12-09 00:32:19,061 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:32:19,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:19,064 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:32:19,066 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:32:19,066 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:32:19,069 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:32:19,072 [ scc.git] DEBUG Already up to date.
2025-12-09 00:32:19,072 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head'
2025-12-09 00:32:19,366 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-12-09 00:32:19,366 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD
2025-12-09 00:32:19,369 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head'
2025-12-09 00:32:19,628 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-12-09 00:32:19,628 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD
2025-12-09 00:32:19,632 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head'
2025-12-09 00:32:19,888 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-12-09 00:32:19,888 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD
2025-12-09 00:32:19,892 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head'
2025-12-09 00:32:20,151 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-12-09 00:32:20,151 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD
2025-12-09 00:32:20,155 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head'
2025-12-09 00:32:20,415 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-12-09 00:32:20,415 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD
2025-12-09 00:32:20,419 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head'
2025-12-09 00:32:20,682 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-12-09 00:32:20,682 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD
2025-12-09 00:32:20,686 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head'
2025-12-09 00:32:20,954 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-12-09 00:32:20,954 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD
2025-12-09 00:32:20,958 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:32:20,958 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:32:20,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:20,960 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2025-12-09 00:32:20,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:20,965 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2025-12-09 00:32:20,973 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:32:20,978 [ scc.git] DEBUG package-lock.json | 12 ++++++------
2025-12-09 00:32:20,978 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-)
2025-12-09 00:32:21,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:32:21,123 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b'
2025-12-09 00:32:21,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:21,128 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b'
2025-12-09 00:32:21,143 [ scc.git] DEBUG Auto-merging package-lock.json
2025-12-09 00:32:21,144 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:32:21,148 [ scc.git] DEBUG package-lock.json | 625 +++---------------------------------------------------
2025-12-09 00:32:21,148 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-)
2025-12-09 00:32:21,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:32:21,523 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-12-09 00:32:21,526 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:21,528 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-12-09 00:32:21,543 [ scc.git] DEBUG Auto-merging package-lock.json
2025-12-09 00:32:21,543 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-12-09 00:32:21,544 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-12-09 00:32:21,544 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-12-09 00:32:21,546 [ scc.git] DEBUG Calling 'git reset --hard 4cd64e8ce543544423e9a72f14599cebb1883c3c'
2025-12-09 00:32:21,551 [ scc.git] DEBUG HEAD is now at 4cd64e8 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents)
2025-12-09 00:32:21,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:32:21,917 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-12-09 00:32:21,920 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-12-09 00:32:21,922 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#597](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
--conflicts
2025-12-09 00:32:21,924 [ scc.config] DEBUG Found github.token
2025-12-09 00:32:21,924 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts.
2025-12-09 00:32:21,924 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2025-12-09 00:32:21,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:21,928 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2025-12-09 00:32:21,944 [ scc.git] DEBUG Auto-merging package-lock.json
2025-12-09 00:32:21,945 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:32:21,950 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++-----
2025-12-09 00:32:21,950 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-)
2025-12-09 00:32:22,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:32:22,323 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c'
2025-12-09 00:32:22,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:22,327 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c'
2025-12-09 00:32:22,342 [ scc.git] DEBUG Auto-merging package-lock.json
2025-12-09 00:32:22,343 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:32:22,347 [ scc.git] DEBUG package-lock.json | 6 +++---
2025-12-09 00:32:22,347 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2025-12-09 00:32:22,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:32:22,712 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-12-09 00:32:22,715 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:22,717 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-12-09 00:32:22,732 [ scc.git] DEBUG Auto-merging package-lock.json
2025-12-09 00:32:22,732 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-12-09 00:32:22,732 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-12-09 00:32:22,733 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-12-09 00:32:22,735 [ scc.git] DEBUG Calling 'git reset --hard 49a6d7bb80e6371e258d58c2a652290505d4b3a9'
2025-12-09 00:32:22,740 [ scc.git] DEBUG HEAD is now at 49a6d7b merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2025-12-09 00:32:23,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:32:23,129 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-12-09 00:32:23,132 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-12-09 00:32:23,135 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#597](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
--conflicts
2025-12-09 00:32:23,136 [ scc.config] DEBUG Found github.token
2025-12-09 00:32:23,137 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts.
2025-12-09 00:32:23,137 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-12-09 00:32:23,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:23,142 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-12-09 00:32:23,159 [ scc.git] DEBUG Auto-merging package-lock.json
2025-12-09 00:32:23,159 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-12-09 00:32:23,160 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-12-09 00:32:23,160 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-12-09 00:32:23,163 [ scc.git] DEBUG Calling 'git reset --hard 49a6d7bb80e6371e258d58c2a652290505d4b3a9'
2025-12-09 00:32:23,167 [ scc.git] DEBUG HEAD is now at 49a6d7b merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2025-12-09 00:32:23,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:32:23,547 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-12-09 00:32:23,550 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-12-09 00:32:23,552 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#597](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
- PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- package-lock.json
--conflicts
2025-12-09 00:32:23,554 [ scc.config] DEBUG Found github.token
2025-12-09 00:32:23,554 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts.
2025-12-09 00:32:23,554 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:32:23,590 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:32:23,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:23,592 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:32:23,629 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:32:23,633 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f368ef03a10> has no local changes
2025-12-09 00:32:23,633 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:32:23,639 [ scc.git] DEBUG [detached HEAD 8363296] merge master -Dorg -Ssuccess-only
2025-12-09 00:32:23,639 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:32:23,640 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:32:24,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2025-12-09 00:32:24,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/513 HTTP/1.1" 200 None
2025-12-09 00:32:25,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None
2025-12-09 00:32:25,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:32:26,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:32:26,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None
2025-12-09 00:32:27,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/aebb6273b9267a47a47363208fa97dc9c638a688?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:32:27,426 [ scc.repo] DEBUG - PR 513 jburel 'Bump Python version'
2025-12-09 00:32:28,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/512 HTTP/1.1" 200 None
2025-12-09 00:32:28,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None
2025-12-09 00:32:29,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:32:29,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:32:30,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None
2025-12-09 00:32:30,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ec8f9e716c574a715529da53dff61ef178020c43?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:32:30,553 [ scc.repo] DEBUG - PR 512 jburel 'Replace manual changelog by automated GH release step'
2025-12-09 00:32:31,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None
2025-12-09 00:32:31,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None
2025-12-09 00:32:31,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None
2025-12-09 00:32:32,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None
2025-12-09 00:32:33,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None
2025-12-09 00:32:33,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None
2025-12-09 00:32:33,472 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:32:34,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2025-12-09 00:32:34,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:32:35,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:32:35,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2025-12-09 00:32:36,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:32:36,160 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-12-09 00:32:36,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None
2025-12-09 00:32:36,662 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:32:37,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2025-12-09 00:32:37,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:32:38,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:32:38,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2025-12-09 00:32:39,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:32:39,273 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-12-09 00:32:39,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2025-12-09 00:32:40,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2025-12-09 00:32:40,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2025-12-09 00:32:41,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2025-12-09 00:32:41,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2025-12-09 00:32:42,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:32:42,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2025-12-09 00:32:43,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:32:43,093 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2025-12-09 00:32:43,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2025-12-09 00:32:44,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2025-12-09 00:32:44,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2025-12-09 00:32:44,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:32:45,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2025-12-09 00:32:45,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:32:45,945 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2025-12-09 00:32:46,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2025-12-09 00:32:46,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2025-12-09 00:32:47,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2025-12-09 00:32:48,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:32:48,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2025-12-09 00:32:49,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:32:49,036 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2025-12-09 00:32:49,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None
2025-12-09 00:32:50,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None
2025-12-09 00:32:50,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None
2025-12-09 00:32:51,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:32:51,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:32:51,523 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:32:51,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-12-09 00:32:51,523 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:32:51,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:51,526 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:32:51,528 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:32:51,528 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:32:51,531 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:32:51,538 [ scc.git] DEBUG Updating 7a798ce..5e2de43
2025-12-09 00:32:52,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None
2025-12-09 00:32:52,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None
2025-12-09 00:32:52,853 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2025-12-09 00:32:53,120 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-12-09 00:32:53,120 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2025-12-09 00:32:53,124 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2025-12-09 00:32:53,383 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-12-09 00:32:53,383 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2025-12-09 00:32:53,387 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2025-12-09 00:32:53,645 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-12-09 00:32:53,645 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2025-12-09 00:32:53,649 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head'
2025-12-09 00:32:53,900 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-12-09 00:32:53,900 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD
2025-12-09 00:32:53,904 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head'
2025-12-09 00:32:54,162 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-12-09 00:32:54,162 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD
2025-12-09 00:32:54,167 [ scc.git] DEBUG Calling 'git fetch origin pull/512/head'
2025-12-09 00:32:54,420 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-12-09 00:32:54,420 [ scc.git] DEBUG * branch refs/pull/512/head -> FETCH_HEAD
2025-12-09 00:32:54,425 [ scc.git] DEBUG Calling 'git fetch origin pull/513/head'
2025-12-09 00:32:54,686 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-12-09 00:32:54,686 [ scc.git] DEBUG * branch refs/pull/513/head -> FETCH_HEAD
2025-12-09 00:32:54,690 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:32:54,690 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:32:54,690 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:54,692 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2025-12-09 00:32:54,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:54,699 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2025-12-09 00:32:54,711 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2025-12-09 00:32:54,711 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js
2025-12-09 00:32:54,712 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:32:54,715 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2025-12-09 00:32:54,715 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2025-12-09 00:32:54,715 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2025-12-09 00:32:54,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:32:54,864 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2025-12-09 00:32:54,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:54,871 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2025-12-09 00:32:54,888 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2025-12-09 00:32:54,888 [ scc.git] DEBUG Auto-merging src/app/context.js
2025-12-09 00:32:54,888 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2025-12-09 00:32:54,888 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2025-12-09 00:32:54,889 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:32:54,893 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2025-12-09 00:32:54,893 [ scc.git] DEBUG src/app/context.js | 6 +-
2025-12-09 00:32:54,893 [ scc.git] DEBUG src/app/header.html | 5 +
2025-12-09 00:32:54,893 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2025-12-09 00:32:54,893 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2025-12-09 00:32:54,893 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2025-12-09 00:32:54,893 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2025-12-09 00:32:54,893 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2025-12-09 00:32:55,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:32:55,271 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2025-12-09 00:32:55,277 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:55,279 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2025-12-09 00:32:55,289 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2025-12-09 00:32:55,290 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:32:55,293 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2025-12-09 00:32:55,293 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2025-12-09 00:32:55,293 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2025-12-09 00:32:55,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:32:55,658 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2025-12-09 00:32:55,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:55,665 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2025-12-09 00:32:55,678 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:32:55,688 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++---------------------------
2025-12-09 00:32:55,688 [ scc.git] DEBUG package.json | 2 +-
2025-12-09 00:32:55,688 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-)
2025-12-09 00:32:56,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:32:56,046 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-12-09 00:32:56,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:56,054 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-12-09 00:32:56,088 [ scc.git] DEBUG Auto-merging package-lock.json
2025-12-09 00:32:56,088 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-12-09 00:32:56,088 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-12-09 00:32:56,088 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-12-09 00:32:56,091 [ scc.git] DEBUG Calling 'git reset --hard 2592f0d7fc7f5ef091202baaaeb513512ae54844'
2025-12-09 00:32:56,098 [ scc.git] DEBUG HEAD is now at 2592f0d merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha)
2025-12-09 00:32:56,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:32:56,441 [ scc.git] DEBUG Calling 'git merge-base 5e2de43ad401fb00690a79644056e0ac15fabfd5 45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-12-09 00:32:56,444 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..5e2de43ad401fb00690a79644056e0ac15fabfd5'
2025-12-09 00:32:56,447 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Conflicting PR. Removed from build [OMERO-plugins-push#597](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/consoleText) for more details.
Possible conflicts:
- PR #499 dependabot[bot] 'Bump nanoid and mocha'
- package-lock.json
--conflicts
2025-12-09 00:32:56,449 [ scc.config] DEBUG Found github.token
2025-12-09 00:32:56,449 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts.
2025-12-09 00:32:56,449 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ec8f9e716c574a715529da53dff61ef178020c43'
2025-12-09 00:32:56,454 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:56,456 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 512 (Replace manual changelog by automated GH release step) ec8f9e716c574a715529da53dff61ef178020c43'
2025-12-09 00:32:56,471 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:32:56,474 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 +
2025-12-09 00:32:56,474 [ scc.git] DEBUG CHANGELOG.md | 261 -------------------------------------
2025-12-09 00:32:56,474 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 261 deletions(-)
2025-12-09 00:32:56,474 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md
2025-12-09 00:32:56,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:32:56,835 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aebb6273b9267a47a47363208fa97dc9c638a688'
2025-12-09 00:32:56,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:56,843 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 513 (Bump Python version) aebb6273b9267a47a47363208fa97dc9c638a688'
2025-12-09 00:32:56,857 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml
2025-12-09 00:32:56,858 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:32:56,861 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 ++--
2025-12-09 00:32:56,861 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-)
2025-12-09 00:32:57,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:32:57,243 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:32:57,281 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:32:57,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:32:57,283 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:32:57,320 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:32:57,326 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f369510b910> has no local changes
2025-12-09 00:32:57,326 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft)
- PR 508 will-moore 'Broadcast channel demo' (stage: draft)
- PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..5e2de43
Previously merged:
- PR 510 joshmoore 'Re-enable omero-test-infra'
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
- PR 512 jburel 'Replace manual changelog by automated GH release step'
- PR 513 jburel 'Bump Python version'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:32:57,332 [ scc.git] DEBUG [detached HEAD 1055e57] merge master -Dorg -Ssuccess-only
2025-12-09 00:32:57,332 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:32:57,332 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:32:57,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2025-12-09 00:32:58,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None
2025-12-09 00:32:58,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None
2025-12-09 00:32:58,912 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:32:59,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None
2025-12-09 00:32:59,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:33:00,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:33:01,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None
2025-12-09 00:33:01,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:33:01,500 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:33:01,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None
2025-12-09 00:33:02,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-12-09 00:33:02,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:33:03,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-12-09 00:33:03,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:33:03,804 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-12-09 00:33:04,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2025-12-09 00:33:04,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2025-12-09 00:33:05,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-12-09 00:33:05,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:33:06,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-12-09 00:33:06,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:33:06,739 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2025-12-09 00:33:06,739 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:33:06,739 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-12-09 00:33:06,739 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:06,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:06,742 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:33:06,744 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:33:06,744 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:33:06,746 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:33:06,749 [ scc.git] DEBUG Already up to date.
2025-12-09 00:33:06,749 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2025-12-09 00:33:07,018 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-12-09 00:33:07,019 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2025-12-09 00:33:07,023 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head'
2025-12-09 00:33:07,279 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-12-09 00:33:07,280 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD
2025-12-09 00:33:07,284 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head'
2025-12-09 00:33:07,546 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-12-09 00:33:07,546 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD
2025-12-09 00:33:07,550 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:33:07,550 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:07,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:07,552 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-12-09 00:33:07,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:07,558 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-12-09 00:33:07,566 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:33:07,569 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2025-12-09 00:33:07,569 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2025-12-09 00:33:07,569 [ scc.git] DEBUG requirements.txt | 2 +-
2025-12-09 00:33:07,569 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2025-12-09 00:33:07,569 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2025-12-09 00:33:07,569 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2025-12-09 00:33:07,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:33:07,743 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-12-09 00:33:07,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:07,749 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-12-09 00:33:07,756 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:33:07,759 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-12-09 00:33:07,759 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-12-09 00:33:08,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:33:08,129 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-12-09 00:33:08,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:08,135 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-12-09 00:33:08,142 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml
2025-12-09 00:33:08,142 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml
2025-12-09 00:33:08,142 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-12-09 00:33:08,143 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-12-09 00:33:08,145 [ scc.git] DEBUG Calling 'git reset --hard 3fb4d82211c0c5a00b5a54a5163401e3ce8369f7'
2025-12-09 00:33:08,148 [ scc.git] DEBUG HEAD is now at 3fb4d82 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI)
2025-12-09 00:33:08,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:33:08,532 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-12-09 00:33:08,535 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a'
2025-12-09 00:33:08,537 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PR. Removed from build [OMERO-plugins-push#597](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/consoleText) for more details.
Possible conflicts:
- PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
- .github/workflows/publish_pypi.yml
--conflicts
2025-12-09 00:33:08,539 [ scc.config] DEBUG Found github.token
2025-12-09 00:33:08,539 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts.
2025-12-09 00:33:08,540 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:33:08,578 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:08,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:08,580 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:33:08,617 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:33:08,620 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36951f2f90> has no local changes
2025-12-09 00:33:08,620 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:33:08,626 [ scc.git] DEBUG [detached HEAD aaa2652] merge master -Dorg -Ssuccess-only
2025-12-09 00:33:08,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:33:08,627 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:33:09,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2025-12-09 00:33:09,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2025-12-09 00:33:10,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2025-12-09 00:33:10,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-12-09 00:33:11,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:33:11,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-12-09 00:33:12,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:33:12,386 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-12-09 00:33:12,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2025-12-09 00:33:13,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2025-12-09 00:33:13,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-12-09 00:33:14,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:33:14,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-12-09 00:33:15,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:33:15,305 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-12-09 00:33:15,305 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:33:15,305 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-12-09 00:33:15,306 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:15,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:15,308 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:33:15,310 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:33:15,310 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:33:15,313 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:33:15,319 [ scc.git] DEBUG Updating 3cd120c..55060a2
2025-12-09 00:33:16,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None
2025-12-09 00:33:16,035 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2025-12-09 00:33:16,312 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-12-09 00:33:16,312 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2025-12-09 00:33:16,317 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2025-12-09 00:33:16,577 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-12-09 00:33:16,577 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2025-12-09 00:33:16,581 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:33:16,581 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:16,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:16,583 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-12-09 00:33:16,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:16,590 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-12-09 00:33:16,602 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2025-12-09 00:33:16,602 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2025-12-09 00:33:16,602 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-12-09 00:33:16,602 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-12-09 00:33:16,602 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-12-09 00:33:16,602 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-12-09 00:33:16,605 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-12-09 00:33:16,609 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-12-09 00:33:16,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:33:16,756 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-12-09 00:33:16,760 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501'
2025-12-09 00:33:16,763 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#597](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2025-12-09 00:33:16,765 [ scc.config] DEBUG Found github.token
2025-12-09 00:33:16,765 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2025-12-09 00:33:16,766 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2025-12-09 00:33:16,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:16,772 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2025-12-09 00:33:16,785 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-12-09 00:33:16,785 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-12-09 00:33:16,785 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2025-12-09 00:33:16,785 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-12-09 00:33:16,786 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-12-09 00:33:16,788 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-12-09 00:33:16,793 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-12-09 00:33:17,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:33:17,162 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7'
2025-12-09 00:33:17,166 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501'
2025-12-09 00:33:17,169 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#597](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2025-12-09 00:33:17,171 [ scc.config] DEBUG Found github.token
2025-12-09 00:33:17,171 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2025-12-09 00:33:17,171 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:33:17,208 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:17,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:17,210 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:33:17,245 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:33:17,249 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f368ef03390> has no local changes
2025-12-09 00:33:17,249 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:33:17,255 [ scc.git] DEBUG [detached HEAD 878d862] merge master -Dorg -Ssuccess-only
2025-12-09 00:33:17,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:33:17,255 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:33:17,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2025-12-09 00:33:18,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None
2025-12-09 00:33:18,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-12-09 00:33:19,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:33:19,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:33:20,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-12-09 00:33:20,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:33:20,744 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-12-09 00:33:21,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None
2025-12-09 00:33:21,252 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:33:21,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-12-09 00:33:22,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:33:22,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:33:23,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-12-09 00:33:23,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:33:23,824 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-12-09 00:33:24,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None
2025-12-09 00:33:24,294 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:33:24,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-12-09 00:33:25,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:33:25,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:33:26,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-12-09 00:33:26,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:33:26,852 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-12-09 00:33:27,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2025-12-09 00:33:27,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2025-12-09 00:33:28,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2025-12-09 00:33:28,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2025-12-09 00:33:29,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2025-12-09 00:33:29,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2025-12-09 00:33:30,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2025-12-09 00:33:30,199 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:33:30,199 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-12-09 00:33:30,200 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:30,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:30,202 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:33:30,204 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:33:30,204 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:33:30,207 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:33:30,209 [ scc.git] DEBUG Already up to date.
2025-12-09 00:33:30,209 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head'
2025-12-09 00:33:30,496 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-12-09 00:33:30,496 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD
2025-12-09 00:33:30,500 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head'
2025-12-09 00:33:30,756 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-12-09 00:33:30,756 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD
2025-12-09 00:33:30,760 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head'
2025-12-09 00:33:31,018 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-12-09 00:33:31,018 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD
2025-12-09 00:33:31,022 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:33:31,022 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:31,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:31,025 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0'
2025-12-09 00:33:31,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:31,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0'
2025-12-09 00:33:31,036 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:33:31,039 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++----------------------------
2025-12-09 00:33:31,039 [ scc.git] DEBUG package.json | 2 +-
2025-12-09 00:33:31,039 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-)
2025-12-09 00:33:31,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:33:31,191 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80'
2025-12-09 00:33:31,193 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:31,195 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80'
2025-12-09 00:33:31,204 [ scc.git] DEBUG Auto-merging package-lock.json
2025-12-09 00:33:31,204 [ scc.git] DEBUG Auto-merging package.json
2025-12-09 00:33:31,205 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:33:31,208 [ scc.git] DEBUG package-lock.json | 18 ++++++++++--------
2025-12-09 00:33:31,208 [ scc.git] DEBUG package.json | 2 +-
2025-12-09 00:33:31,208 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-)
2025-12-09 00:33:31,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:33:31,581 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-12-09 00:33:31,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:31,586 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-12-09 00:33:31,594 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:33:31,596 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-12-09 00:33:31,597 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-12-09 00:33:31,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:33:31,986 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:33:32,025 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:32,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:32,027 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:33:32,063 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:33:32,066 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f368ef1ebd0> has no local changes
2025-12-09 00:33:32,067 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:33:32,072 [ scc.git] DEBUG [detached HEAD 7b079e6] merge master -Dorg -Ssuccess-only
2025-12-09 00:33:32,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:33:32,073 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:33:32,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2025-12-09 00:33:32,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None
2025-12-09 00:33:32,972 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:33:33,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None
2025-12-09 00:33:34,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:33:34,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:33:35,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None
2025-12-09 00:33:35,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:33:35,512 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:33:35,512 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:33:35,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-12-09 00:33:35,512 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:35,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:35,514 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:33:35,516 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:33:35,517 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:33:35,519 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:33:35,522 [ scc.git] DEBUG Already up to date.
2025-12-09 00:33:35,522 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2025-12-09 00:33:35,803 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2025-12-09 00:33:35,803 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2025-12-09 00:33:35,807 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:33:35,807 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:35,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:35,809 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e'
2025-12-09 00:33:35,812 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:35,814 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e'
2025-12-09 00:33:35,821 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:33:35,823 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-12-09 00:33:35,823 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-12-09 00:33:35,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:33:35,968 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:33:36,006 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:36,006 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:36,008 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:33:36,045 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:33:36,048 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f368ef853d0> has no local changes
2025-12-09 00:33:36,048 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:33:36,053 [ scc.git] DEBUG [detached HEAD 30586de] merge master -Dorg -Ssuccess-only
2025-12-09 00:33:36,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:33:36,054 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:33:36,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2025-12-09 00:33:37,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None
2025-12-09 00:33:37,062 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:33:37,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-12-09 00:33:38,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:33:38,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:33:39,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-12-09 00:33:39,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None
2025-12-09 00:33:40,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-12-09 00:33:40,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None
2025-12-09 00:33:40,490 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:33:40,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None
2025-12-09 00:33:41,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None
2025-12-09 00:33:41,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-12-09 00:33:42,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:33:42,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:33:43,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-12-09 00:33:43,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None
2025-12-09 00:33:44,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-12-09 00:33:44,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None
2025-12-09 00:33:44,902 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions'
2025-12-09 00:33:45,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None
2025-12-09 00:33:45,369 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:33:45,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-12-09 00:33:45,369 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:45,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:45,372 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:33:45,374 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:33:45,374 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:33:45,376 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:33:45,379 [ scc.git] DEBUG Already up to date.
2025-12-09 00:33:45,379 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head'
2025-12-09 00:33:45,662 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-12-09 00:33:45,662 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD
2025-12-09 00:33:45,665 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head'
2025-12-09 00:33:45,922 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-12-09 00:33:45,922 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD
2025-12-09 00:33:45,926 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:33:45,926 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:45,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:45,928 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3'
2025-12-09 00:33:45,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:45,933 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3'
2025-12-09 00:33:45,940 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:33:45,942 [ scc.git] DEBUG setup.py | 4 +-
2025-12-09 00:33:45,942 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 +
2025-12-09 00:33:45,942 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++--
2025-12-09 00:33:45,943 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-)
2025-12-09 00:33:46,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:33:46,087 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301'
2025-12-09 00:33:46,089 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:46,091 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301'
2025-12-09 00:33:46,098 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:33:46,100 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-12-09 00:33:46,100 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-12-09 00:33:46,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:33:46,481 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:33:46,519 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:46,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:46,521 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:33:46,556 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:33:46,559 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f36951e70d0> has no local changes
2025-12-09 00:33:46,559 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
- PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:33:46,565 [ scc.git] DEBUG [detached HEAD cb276ac] merge master -Dorg -Ssuccess-only
2025-12-09 00:33:46,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:33:46,565 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:33:47,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2025-12-09 00:33:47,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None
2025-12-09 00:33:47,527 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:33:48,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None
2025-12-09 00:33:48,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:33:49,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:33:49,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None
2025-12-09 00:33:50,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:33:50,176 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:33:50,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2025-12-09 00:33:51,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2025-12-09 00:33:51,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-12-09 00:33:52,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:33:52,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-12-09 00:33:53,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:33:53,212 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2025-12-09 00:33:53,212 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:33:53,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-12-09 00:33:53,212 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:53,212 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:53,215 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:33:53,217 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:33:53,217 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:33:53,220 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:33:53,222 [ scc.git] DEBUG Already up to date.
2025-12-09 00:33:53,222 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-12-09 00:33:53,486 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-12-09 00:33:53,486 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-12-09 00:33:53,490 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head'
2025-12-09 00:33:53,752 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-12-09 00:33:53,752 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD
2025-12-09 00:33:53,756 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:33:53,756 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:53,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:53,758 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-12-09 00:33:53,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:53,763 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-12-09 00:33:53,771 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2025-12-09 00:33:53,771 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2025-12-09 00:33:53,771 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2025-12-09 00:33:53,771 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2025-12-09 00:33:53,771 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2025-12-09 00:33:53,771 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2025-12-09 00:33:53,771 [ scc.git] DEBUG Auto-merging setup.py
2025-12-09 00:33:53,771 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2025-12-09 00:33:53,771 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-12-09 00:33:53,772 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-12-09 00:33:53,774 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2025-12-09 00:33:53,778 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2025-12-09 00:33:54,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:33:54,063 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-12-09 00:33:54,066 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2025-12-09 00:33:54,069 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#597](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/signup_settings.py
- omero_signup/urls.py
- omero_signup/views.py
- setup.py
--conflicts
2025-12-09 00:33:54,071 [ scc.config] DEBUG Found github.token
2025-12-09 00:33:54,071 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2025-12-09 00:33:54,071 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa'
2025-12-09 00:33:54,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:54,075 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa'
2025-12-09 00:33:54,082 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:33:54,085 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-12-09 00:33:54,085 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-12-09 00:33:54,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:33:54,457 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:33:54,494 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:33:54,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:33:54,497 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:33:54,533 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:33:54,536 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3695218ad0> has no local changes
2025-12-09 00:33:54,536 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:33:54,541 [ scc.git] DEBUG [detached HEAD 57d6106] merge master -Dorg -Ssuccess-only
2025-12-09 00:33:54,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:33:54,542 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:33:54,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2025-12-09 00:33:55,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/84 HTTP/1.1" 200 None
2025-12-09 00:33:56,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/b0d122c244964cae2668a01b221e1ded7c2171c6 HTTP/1.1" 200 None
2025-12-09 00:33:56,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/b0d122c244964cae2668a01b221e1ded7c2171c6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:33:57,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/b0d122c244964cae2668a01b221e1ded7c2171c6/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:33:57,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/b0d122c244964cae2668a01b221e1ded7c2171c6 HTTP/1.1" 200 None
2025-12-09 00:33:57,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/b0d122c244964cae2668a01b221e1ded7c2171c6?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:33:57,953 [ scc.repo] DEBUG - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT'
2025-12-09 00:33:58,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2025-12-09 00:33:58,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2025-12-09 00:33:59,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None
2025-12-09 00:33:59,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2025-12-09 00:34:00,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:34:00,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:34:00,992 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:34:00,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-12-09 00:34:00,992 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:00,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:00,995 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:34:00,997 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:34:00,997 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:34:01,000 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:34:01,007 [ scc.git] DEBUG Updating cda3ec6..14c1231
2025-12-09 00:34:01,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None
2025-12-09 00:34:02,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None
2025-12-09 00:34:02,294 [ scc.git] DEBUG Calling 'git fetch origin pull/84/head'
2025-12-09 00:34:02,564 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-12-09 00:34:02,564 [ scc.git] DEBUG * branch refs/pull/84/head -> FETCH_HEAD
2025-12-09 00:34:02,569 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:34:02,569 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:02,569 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:02,571 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b0d122c244964cae2668a01b221e1ded7c2171c6'
2025-12-09 00:34:02,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:02,576 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 84 (Remove use of OMERO_SERVER_PORT) b0d122c244964cae2668a01b221e1ded7c2171c6'
2025-12-09 00:34:02,582 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:34:02,585 [ scc.git] DEBUG README.md | 4 ++--
2025-12-09 00:34:02,585 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-)
2025-12-09 00:34:02,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:02,725 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:34:02,762 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:02,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:02,764 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:34:02,800 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:34:02,803 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f368ef11ad0> has no local changes
2025-12-09 00:34:02,803 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
Updating cda3ec6..14c1231
Previously merged:
- PR 82 jburel 'Upgrade python'
- PR 81 erickmartins 'add ulimits to omero-server container'
Merged PRs:
- PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:34:02,808 [ scc.git] DEBUG [detached HEAD 86fa4c4] merge master -Dorg -Ssuccess-only
2025-12-09 00:34:02,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:02,809 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:34:03,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None
2025-12-09 00:34:03,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None
2025-12-09 00:34:03,712 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:34:04,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None
2025-12-09 00:34:04,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:34:05,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:34:05,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None
2025-12-09 00:34:06,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:34:06,405 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:34:06,405 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:34:06,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-12-09 00:34:06,405 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:06,405 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:06,407 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:34:06,409 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:34:06,409 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:34:06,412 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:34:06,415 [ scc.git] DEBUG Already up to date.
2025-12-09 00:34:06,415 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-12-09 00:34:06,683 [ scc.git] DEBUG From https://github.com/ome/omero-upload
2025-12-09 00:34:06,683 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-12-09 00:34:06,687 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:34:06,687 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:06,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:06,689 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea'
2025-12-09 00:34:06,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:06,694 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea'
2025-12-09 00:34:06,701 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:34:06,704 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-12-09 00:34:06,704 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-12-09 00:34:06,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:06,852 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:34:06,889 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:06,889 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:06,892 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:34:06,928 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:34:06,931 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f368ef527d0> has no local changes
2025-12-09 00:34:06,931 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Merged PRs:
- PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:34:06,937 [ scc.git] DEBUG [detached HEAD 8e21497] merge master -Dorg -Ssuccess-only
2025-12-09 00:34:06,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:06,937 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:34:07,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2025-12-09 00:34:07,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None
2025-12-09 00:34:07,817 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:34:08,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None
2025-12-09 00:34:08,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:34:09,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:34:09,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None
2025-12-09 00:34:10,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:34:10,407 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:34:10,407 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:34:10,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-12-09 00:34:10,407 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:10,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:10,410 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:34:10,412 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:34:10,412 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:34:10,414 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:34:10,421 [ scc.git] DEBUG Updating deab817..160d894
2025-12-09 00:34:11,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None
2025-12-09 00:34:11,081 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head'
2025-12-09 00:34:11,352 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2025-12-09 00:34:11,353 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD
2025-12-09 00:34:11,357 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:34:11,357 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:11,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:11,359 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902'
2025-12-09 00:34:11,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:11,363 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902'
2025-12-09 00:34:11,370 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:34:11,372 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-12-09 00:34:11,372 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-12-09 00:34:11,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:11,515 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:34:11,551 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:11,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:11,553 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:34:11,588 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:34:11,592 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f368efc0d50> has no local changes
2025-12-09 00:34:11,592 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:34:11,597 [ scc.git] DEBUG [detached HEAD d310770] merge master -Dorg -Ssuccess-only
2025-12-09 00:34:11,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:11,598 [ scc.git] INFO Overriding base-branch from master to main
2025-12-09 00:34:11,598 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:34:12,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2025-12-09 00:34:12,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None
2025-12-09 00:34:13,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None
2025-12-09 00:34:13,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None
2025-12-09 00:34:14,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:34:14,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:34:15,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None
2025-12-09 00:34:15,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:34:15,509 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import'
2025-12-09 00:34:15,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2025-12-09 00:34:16,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2025-12-09 00:34:16,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2025-12-09 00:34:17,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-12-09 00:34:17,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:34:18,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-12-09 00:34:18,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:34:18,777 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-12-09 00:34:18,778 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:34:18,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-12-09 00:34:18,778 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:18,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:18,780 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2025-12-09 00:34:18,782 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:34:18,782 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2025-12-09 00:34:18,786 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2025-12-09 00:34:18,793 [ scc.git] DEBUG Updating 8f3c313..4e1e685
2025-12-09 00:34:19,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None
2025-12-09 00:34:20,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None
2025-12-09 00:34:20,125 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2025-12-09 00:34:20,390 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-12-09 00:34:20,390 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2025-12-09 00:34:20,394 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head'
2025-12-09 00:34:20,656 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-12-09 00:34:20,656 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD
2025-12-09 00:34:20,660 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:34:20,660 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:20,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:20,662 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-12-09 00:34:20,665 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:20,667 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-12-09 00:34:20,675 [ scc.git] DEBUG Auto-merging README.rst
2025-12-09 00:34:20,675 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2025-12-09 00:34:20,675 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2025-12-09 00:34:20,675 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py
2025-12-09 00:34:20,675 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-12-09 00:34:20,675 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-12-09 00:34:20,677 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368'
2025-12-09 00:34:20,681 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1
2025-12-09 00:34:20,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:20,833 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-12-09 00:34:20,836 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368'
2025-12-09 00:34:20,839 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#597](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2025-12-09 00:34:20,841 [ scc.config] DEBUG Found github.token
2025-12-09 00:34:20,841 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2025-12-09 00:34:20,841 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc'
2025-12-09 00:34:20,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:20,846 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc'
2025-12-09 00:34:20,853 [ scc.git] DEBUG Auto-merging README.rst
2025-12-09 00:34:20,853 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py
2025-12-09 00:34:20,854 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:34:20,857 [ scc.git] DEBUG README.rst | 3 +
2025-12-09 00:34:20,857 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++
2025-12-09 00:34:20,857 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 +
2025-12-09 00:34:20,857 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++-
2025-12-09 00:34:20,857 [ scc.git] DEBUG setup.py | 5 +-
2025-12-09 00:34:20,857 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-)
2025-12-09 00:34:20,857 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html
2025-12-09 00:34:21,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:21,229 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:34:21,267 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:21,267 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:21,269 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:34:21,306 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:34:21,309 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3695207950> has no local changes
2025-12-09 00:34:21,309 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Updating 8f3c313..4e1e685
Previously merged:
- PR 23 lubianat 'Fix mix of .rst and .md on README'
- PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
Merged PRs:
- PR 21 will-moore 'Web zarr import'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:34:21,314 [ scc.git] DEBUG [detached HEAD 04bf516] merge master -Dorg -Ssuccess-only
2025-12-09 00:34:21,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:21,314 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:34:21,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None
2025-12-09 00:34:22,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None
2025-12-09 00:34:22,216 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:34:22,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None
2025-12-09 00:34:23,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:34:24,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:34:24,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None
2025-12-09 00:34:25,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:34:25,176 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:34:25,176 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:34:25,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-12-09 00:34:25,177 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:25,177 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:25,179 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:34:25,181 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:34:25,181 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:34:25,183 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:34:25,186 [ scc.git] DEBUG Already up to date.
2025-12-09 00:34:25,186 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head'
2025-12-09 00:34:25,453 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror
2025-12-09 00:34:25,453 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD
2025-12-09 00:34:25,457 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:34:25,457 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:25,457 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:25,459 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9'
2025-12-09 00:34:25,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:25,464 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9'
2025-12-09 00:34:25,470 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:34:25,473 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-12-09 00:34:25,473 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-12-09 00:34:25,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:25,632 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:34:25,671 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:25,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:25,673 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:34:25,710 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:34:25,713 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f368ef7f750> has no local changes
2025-12-09 00:34:25,713 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Merged PRs:
- PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:34:25,718 [ scc.git] DEBUG [detached HEAD aca6351] merge master -Dorg -Ssuccess-only
2025-12-09 00:34:25,719 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:25,719 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:34:26,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None
2025-12-09 00:34:26,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None
2025-12-09 00:34:26,638 [ scc.repo] DEBUG # ... Include label: dependencies
2025-12-09 00:34:27,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None
2025-12-09 00:34:27,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:34:28,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:34:28,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None
2025-12-09 00:34:29,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:34:29,232 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:34:29,232 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:34:29,232 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-12-09 00:34:29,232 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:29,232 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:29,234 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:34:29,236 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:34:29,237 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:34:29,239 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:34:29,242 [ scc.git] DEBUG Already up to date.
2025-12-09 00:34:29,242 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head'
2025-12-09 00:34:29,517 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest
2025-12-09 00:34:29,517 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD
2025-12-09 00:34:29,521 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:34:29,521 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:29,521 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:29,523 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478'
2025-12-09 00:34:29,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:29,527 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478'
2025-12-09 00:34:29,534 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:34:29,537 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-12-09 00:34:29,537 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-12-09 00:34:29,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:29,689 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:34:29,727 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:29,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:29,730 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:34:29,766 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:34:29,769 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f368efcfed0> has no local changes
2025-12-09 00:34:29,769 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Merged PRs:
- PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:34:29,774 [ scc.git] DEBUG [detached HEAD 6ae3c51] merge master -Dorg -Ssuccess-only
2025-12-09 00:34:29,775 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:29,775 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:34:30,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2025-12-09 00:34:30,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2025-12-09 00:34:31,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2025-12-09 00:34:31,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-12-09 00:34:32,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:34:32,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-12-09 00:34:33,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:34:33,046 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2025-12-09 00:34:33,046 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:34:33,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-12-09 00:34:33,046 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:33,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:33,048 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-12-09 00:34:33,051 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:34:33,051 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-12-09 00:34:33,053 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-12-09 00:34:33,056 [ scc.git] DEBUG Already up to date.
2025-12-09 00:34:33,056 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2025-12-09 00:34:33,315 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2025-12-09 00:34:33,315 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2025-12-09 00:34:33,320 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:34:33,320 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:33,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:33,322 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-12-09 00:34:33,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:33,327 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-12-09 00:34:33,335 [ scc.git] DEBUG Auto-merging Dockerfile
2025-12-09 00:34:33,335 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2025-12-09 00:34:33,335 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-12-09 00:34:33,335 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-12-09 00:34:33,338 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-12-09 00:34:33,342 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-12-09 00:34:33,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:33,497 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-12-09 00:34:33,500 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-12-09 00:34:33,502 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#597](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2025-12-09 00:34:33,504 [ scc.config] DEBUG Found github.token
2025-12-09 00:34:33,504 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2025-12-09 00:34:33,504 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:34:33,541 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:33,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:33,543 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:34:33,579 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:34:33,582 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f368efe6590> has no local changes
2025-12-09 00:34:33,582 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:34:33,588 [ scc.git] DEBUG [detached HEAD fbff969] merge master -Dorg -Ssuccess-only
2025-12-09 00:34:33,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:33,588 [ scc.git] INFO Overriding base-branch from master to develop
2025-12-09 00:34:33,588 [ scc.repo] DEBUG ## PRs found:
2025-12-09 00:34:34,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-12-09 00:34:34,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/231 HTTP/1.1" 200 None
2025-12-09 00:34:35,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/61803424b63d5c1bf9ff0906f389526c875c901d HTTP/1.1" 200 None
2025-12-09 00:34:35,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/61803424b63d5c1bf9ff0906f389526c875c901d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-12-09 00:34:36,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/61803424b63d5c1bf9ff0906f389526c875c901d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-12-09 00:34:36,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/61803424b63d5c1bf9ff0906f389526c875c901d HTTP/1.1" 200 None
2025-12-09 00:34:36,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/61803424b63d5c1bf9ff0906f389526c875c901d?per_page=1 HTTP/1.1" 200 2
2025-12-09 00:34:36,934 [ scc.repo] DEBUG - PR 231 jburel 'Create Release '
2025-12-09 00:34:37,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-12-09 00:34:37,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-12-09 00:34:37,902 [ scc.repo] DEBUG ## Branches found:
2025-12-09 00:34:37,902 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-12-09 00:34:37,902 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:37,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:37,904 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-12-09 00:34:37,906 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-12-09 00:34:37,906 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-12-09 00:34:37,909 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-12-09 00:34:37,922 [ scc.git] DEBUG Updating 4b4c755..18a9a75
2025-12-09 00:34:38,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None
2025-12-09 00:34:39,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None
2025-12-09 00:34:39,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None
2025-12-09 00:34:40,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None
2025-12-09 00:34:41,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None
2025-12-09 00:34:41,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2025-12-09 00:34:41,835 [ scc.git] DEBUG Calling 'git fetch origin pull/231/head'
2025-12-09 00:34:42,118 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-12-09 00:34:42,119 [ scc.git] DEBUG * branch refs/pull/231/head -> FETCH_HEAD
2025-12-09 00:34:42,122 [ scc.git] DEBUG ## Unique users: []
2025-12-09 00:34:42,123 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:42,123 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:42,125 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...61803424b63d5c1bf9ff0906f389526c875c901d'
2025-12-09 00:34:42,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:42,130 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 231 (Create Release ) 61803424b63d5c1bf9ff0906f389526c875c901d'
2025-12-09 00:34:42,138 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-12-09 00:34:42,141 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 11 +++++++----
2025-12-09 00:34:42,141 [ scc.git] DEBUG 1 file changed, 7 insertions(+), 4 deletions(-)
2025-12-09 00:34:42,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:42,285 [ scc.git] DEBUG Calling 'git submodule update'
2025-12-09 00:34:42,323 [ scc.git] DEBUG Get sha1 of %s
2025-12-09 00:34:42,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-12-09 00:34:42,325 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:34:42,362 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:34:42,365 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f368c606e90> has no local changes
2025-12-09 00:34:42,365 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
Updating 4b4c755..18a9a75
Previously merged:
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
- PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 231 jburel 'Create Release '
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:34:42,370 [ scc.git] DEBUG [detached HEAD 5b5d461] merge master -Dorg -Ssuccess-only
2025-12-09 00:34:42,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:42,371 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-12-09 00:34:42,438 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2025-12-09 00:34:42,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:42,687 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2025-12-09 00:34:42,688 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2025-12-09 00:34:43,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:43,078 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2025-12-09 00:34:43,080 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2025-12-09 00:34:43,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:43,484 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2025-12-09 00:34:43,486 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2025-12-09 00:34:43,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:43,916 [ scc.config] DEBUG Found submodule.omero-figure.url
2025-12-09 00:34:44,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:44,328 [ scc.config] DEBUG Found submodule.omero-figure.branch
2025-12-09 00:34:44,330 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2025-12-09 00:34:44,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:44,736 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2025-12-09 00:34:44,738 [ scc.config] DEBUG Found submodule.omero-gallery.url
2025-12-09 00:34:45,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:45,133 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2025-12-09 00:34:45,135 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2025-12-09 00:34:45,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:45,553 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2025-12-09 00:34:45,555 [ scc.config] DEBUG Found submodule.omero-mapr.url
2025-12-09 00:34:45,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:45,969 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2025-12-09 00:34:45,971 [ scc.config] DEBUG Found submodule.omero-metadata.url
2025-12-09 00:34:46,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:46,371 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2025-12-09 00:34:46,373 [ scc.config] DEBUG Found submodule.omero-parade.url
2025-12-09 00:34:46,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:46,773 [ scc.config] DEBUG Found submodule.omero-parade.branch
2025-12-09 00:34:46,775 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2025-12-09 00:34:47,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:47,171 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2025-12-09 00:34:47,173 [ scc.config] DEBUG Found submodule.omero-rois.url
2025-12-09 00:34:47,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:47,571 [ scc.config] DEBUG Found submodule.omero-signup.url
2025-12-09 00:34:47,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:47,976 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2025-12-09 00:34:48,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:48,373 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2025-12-09 00:34:48,374 [ scc.config] DEBUG Found submodule.omero-upload.url
2025-12-09 00:34:48,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:48,783 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2025-12-09 00:34:49,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:49,181 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2025-12-09 00:34:49,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:49,583 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2025-12-09 00:34:49,585 [ scc.config] DEBUG Found submodule.omero-weberror.url
2025-12-09 00:34:49,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:49,969 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2025-12-09 00:34:49,971 [ scc.config] DEBUG Found submodule.omero-webtest.url
2025-12-09 00:34:50,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:50,374 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2025-12-09 00:34:50,376 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2025-12-09 00:34:50,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:50,769 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2025-12-09 00:34:50,771 [ scc.config] DEBUG Found submodule.scripts.url
2025-12-09 00:34:51,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-12-09 00:34:51,157 [ scc.config] DEBUG Found submodule.scripts.branch
2025-12-09 00:34:51,157 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-12-09 00:34:51,233 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3697d02650> has local changes
2025-12-09 00:34:51,233 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
- PR 74 jburel 'Replace manual changelog by automated GH release step'
- PR 75 jburel 'Sort the new channels to ensure settings are set'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..37ea700
Previously merged:
- PR 180 will-moore 'Import command'
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 174 will-moore 'Skip wells'
- PR 181 will-moore 'Add labels support for import'
- PR 186 jburel 'Create release from tag'
Conflicting PRs (not included):
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
- PR 182 will-moore 'Revert "Remove support for Plate import"'
Repository: ome/omero-figure
Excluded PRs:
- PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' (user: Nirkan)
- PR 651 Rdornier 'More compliant align to grid' (user: Rdornier)
- PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' (user: Rdornier)
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
Updating 9cc36cde..691a9a60
Previously merged:
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
- PR 646 JensWendt 'fix word wrap of image names'
- PR 612 will-moore 'Script version'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 616 Rdornier 'Fix labels around border'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540'
- PR 649 jburel 'Replace manual changelog by automated GH release step'
- PR 650 jburel 'Bump Python version'
- PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 '
Conflicting PRs (not included):
- PR 637 Rdornier 'Fix scalebar position'
- PR 643 Rdornier 'Shape scaling'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
- PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft)
- PR 508 will-moore 'Broadcast channel demo' (stage: draft)
- PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..5e2de43
Previously merged:
- PR 510 joshmoore 'Re-enable omero-test-infra'
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
- PR 512 jburel 'Replace manual changelog by automated GH release step'
- PR 513 jburel 'Bump Python version'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
- PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
Updating cda3ec6..14c1231
Previously merged:
- PR 82 jburel 'Upgrade python'
- PR 81 erickmartins 'add ulimits to omero-server container'
Merged PRs:
- PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT'
Repository: ome/omero-upload
Already up to date.
Merged PRs:
- PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Updating 8f3c313..4e1e685
Previously merged:
- PR 23 lubianat 'Fix mix of .rst and .md on README'
- PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
Merged PRs:
- PR 21 will-moore 'Web zarr import'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Merged PRs:
- PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: openmicroscopy/omero-webtest
Already up to date.
Merged PRs:
- PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
Updating 4b4c755..18a9a75
Previously merged:
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
- PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 231 jburel 'Create Release '
Generated by OMERO-plugins-push#597 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/597/)'
2025-12-09 00:34:51,243 [ scc.git] DEBUG [detached HEAD f232152] merge master -Dorg -Ssuccess-only
2025-12-09 00:34:51,243 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2025-12-09 00:34:51,243 [ scc.merge] INFO Repository: ome/omero-plugins
2025-12-09 00:34:51,243 [ scc.merge] INFO Already up to date.
2025-12-09 00:34:51,243 [ scc.merge] INFO
2025-12-09 00:34:51,243 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,243 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-12-09 00:34:51,243 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-12-09 00:34:51,243 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-12-09 00:34:51,243 [ scc.merge] INFO
2025-12-09 00:34:51,243 [ scc.merge] INFO Repository: ome/minimal-omero-client
2025-12-09 00:34:51,243 [ scc.merge] INFO Already up to date.
2025-12-09 00:34:51,243 [ scc.merge] INFO
2025-12-09 00:34:51,243 [ scc.merge] INFO
2025-12-09 00:34:51,243 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2025-12-09 00:34:51,244 [ scc.merge] INFO Excluded PRs:
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2025-12-09 00:34:51,244 [ scc.merge] INFO Already up to date.
2025-12-09 00:34:51,244 [ scc.merge] INFO
2025-12-09 00:34:51,244 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:34:51,244 [ scc.merge] INFO
2025-12-09 00:34:51,244 [ scc.merge] INFO Repository: ome/omero-cli-render
2025-12-09 00:34:51,244 [ scc.merge] INFO Excluded PRs:
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2025-12-09 00:34:51,244 [ scc.merge] INFO Already up to date.
2025-12-09 00:34:51,244 [ scc.merge] INFO
2025-12-09 00:34:51,244 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands'
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names'
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step'
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set'
2025-12-09 00:34:51,244 [ scc.merge] INFO
2025-12-09 00:34:51,244 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2025-12-09 00:34:51,244 [ scc.merge] INFO Excluded PRs:
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft)
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft)
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft)
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
2025-12-09 00:34:51,244 [ scc.merge] INFO Updating 11d3587..37ea700
2025-12-09 00:34:51,244 [ scc.merge] INFO Previously merged:
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 180 will-moore 'Import command'
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0'
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer'
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()'
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests'
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-12-09 00:34:51,244 [ scc.merge] INFO
2025-12-09 00:34:51,244 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 174 will-moore 'Skip wells'
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import'
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 186 jburel 'Create release from tag'
2025-12-09 00:34:51,244 [ scc.merge] INFO
2025-12-09 00:34:51,244 [ scc.merge] INFO Conflicting PRs (not included):
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-12-09 00:34:51,244 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"'
2025-12-09 00:34:51,244 [ scc.merge] INFO
2025-12-09 00:34:51,244 [ scc.merge] INFO Repository: ome/omero-figure
2025-12-09 00:34:51,244 [ scc.merge] INFO Excluded PRs:
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' (user: Nirkan)
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' (user: Rdornier)
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' (user: Rdornier)
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft)
2025-12-09 00:34:51,245 [ scc.merge] INFO Updating 9cc36cde..691a9a60
2025-12-09 00:34:51,245 [ scc.merge] INFO Previously merged:
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 612 will-moore 'Script version'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-12-09 00:34:51,245 [ scc.merge] INFO
2025-12-09 00:34:51,245 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 650 jburel 'Bump Python version'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 '
2025-12-09 00:34:51,245 [ scc.merge] INFO
2025-12-09 00:34:51,245 [ scc.merge] INFO Conflicting PRs (not included):
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 643 Rdornier 'Shape scaling'
2025-12-09 00:34:51,245 [ scc.merge] INFO
2025-12-09 00:34:51,245 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2025-12-09 00:34:51,245 [ scc.merge] INFO Already up to date.
2025-12-09 00:34:51,245 [ scc.merge] INFO
2025-12-09 00:34:51,245 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:34:51,245 [ scc.merge] INFO
2025-12-09 00:34:51,245 [ scc.merge] INFO Repository: ome/omero-gallery
2025-12-09 00:34:51,245 [ scc.merge] INFO Already up to date.
2025-12-09 00:34:51,245 [ scc.merge] INFO
2025-12-09 00:34:51,245 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-12-09 00:34:51,245 [ scc.merge] INFO
2025-12-09 00:34:51,245 [ scc.merge] INFO Conflicting PRs (not included):
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-12-09 00:34:51,245 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-12-09 00:34:51,246 [ scc.merge] INFO
2025-12-09 00:34:51,246 [ scc.merge] INFO Repository: ome/omero-iviewer
2025-12-09 00:34:51,246 [ scc.merge] INFO Excluded PRs:
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft)
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft)
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure)
2025-12-09 00:34:51,246 [ scc.merge] INFO Updating 7a798ce..5e2de43
2025-12-09 00:34:51,246 [ scc.merge] INFO Previously merged:
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra'
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-12-09 00:34:51,246 [ scc.merge] INFO
2025-12-09 00:34:51,246 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step'
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 513 jburel 'Bump Python version'
2025-12-09 00:34:51,246 [ scc.merge] INFO
2025-12-09 00:34:51,246 [ scc.merge] INFO Conflicting PRs (not included):
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-12-09 00:34:51,246 [ scc.merge] INFO
2025-12-09 00:34:51,246 [ scc.merge] INFO Repository: ome/omero-mapr
2025-12-09 00:34:51,246 [ scc.merge] INFO Excluded PRs:
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2025-12-09 00:34:51,246 [ scc.merge] INFO Already up to date.
2025-12-09 00:34:51,246 [ scc.merge] INFO
2025-12-09 00:34:51,246 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-12-09 00:34:51,246 [ scc.merge] INFO
2025-12-09 00:34:51,246 [ scc.merge] INFO Conflicting PRs (not included):
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:34:51,246 [ scc.merge] INFO
2025-12-09 00:34:51,246 [ scc.merge] INFO Repository: ome/omero-metadata
2025-12-09 00:34:51,246 [ scc.merge] INFO Updating 3cd120c..55060a2
2025-12-09 00:34:51,246 [ scc.merge] INFO Previously merged:
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-12-09 00:34:51,246 [ scc.merge] INFO
2025-12-09 00:34:51,246 [ scc.merge] INFO Conflicting PRs (not included):
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-12-09 00:34:51,246 [ scc.merge] INFO
2025-12-09 00:34:51,246 [ scc.merge] INFO Repository: ome/omero-parade
2025-12-09 00:34:51,246 [ scc.merge] INFO Excluded PRs:
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2025-12-09 00:34:51,246 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2025-12-09 00:34:51,247 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2025-12-09 00:34:51,247 [ scc.merge] INFO Already up to date.
2025-12-09 00:34:51,247 [ scc.merge] INFO
2025-12-09 00:34:51,247 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,247 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-12-09 00:34:51,247 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-12-09 00:34:51,247 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-12-09 00:34:51,247 [ scc.merge] INFO
2025-12-09 00:34:51,247 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2025-12-09 00:34:51,247 [ scc.merge] INFO Already up to date.
2025-12-09 00:34:51,247 [ scc.merge] INFO
2025-12-09 00:34:51,247 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,247 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:34:51,247 [ scc.merge] INFO
2025-12-09 00:34:51,247 [ scc.merge] INFO Repository: ome/omero-rois
2025-12-09 00:34:51,247 [ scc.merge] INFO Excluded PRs:
2025-12-09 00:34:51,247 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-12-09 00:34:51,247 [ scc.merge] INFO Already up to date.
2025-12-09 00:34:51,247 [ scc.merge] INFO
2025-12-09 00:34:51,247 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,247 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions'
2025-12-09 00:34:51,247 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:34:51,247 [ scc.merge] INFO
2025-12-09 00:34:51,247 [ scc.merge] INFO Repository: ome/omero-signup
2025-12-09 00:34:51,247 [ scc.merge] INFO Already up to date.
2025-12-09 00:34:51,247 [ scc.merge] INFO
2025-12-09 00:34:51,247 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,247 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:34:51,247 [ scc.merge] INFO
2025-12-09 00:34:51,247 [ scc.merge] INFO Conflicting PRs (not included):
2025-12-09 00:34:51,247 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2025-12-09 00:34:51,247 [ scc.merge] INFO
2025-12-09 00:34:51,247 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2025-12-09 00:34:51,247 [ scc.merge] INFO Excluded PRs:
2025-12-09 00:34:51,247 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2025-12-09 00:34:51,247 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
2025-12-09 00:34:51,247 [ scc.merge] INFO Updating cda3ec6..14c1231
2025-12-09 00:34:51,247 [ scc.merge] INFO Previously merged:
2025-12-09 00:34:51,247 [ scc.merge] INFO - PR 82 jburel 'Upgrade python'
2025-12-09 00:34:51,247 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container'
2025-12-09 00:34:51,247 [ scc.merge] INFO
2025-12-09 00:34:51,247 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,247 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT'
2025-12-09 00:34:51,247 [ scc.merge] INFO
2025-12-09 00:34:51,247 [ scc.merge] INFO Repository: ome/omero-upload
2025-12-09 00:34:51,247 [ scc.merge] INFO Already up to date.
2025-12-09 00:34:51,247 [ scc.merge] INFO
2025-12-09 00:34:51,247 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,247 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:34:51,247 [ scc.merge] INFO
2025-12-09 00:34:51,247 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2025-12-09 00:34:51,248 [ scc.merge] INFO Updating deab817..160d894
2025-12-09 00:34:51,248 [ scc.merge] INFO Previously merged:
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 20 jburel 'Build'
2025-12-09 00:34:51,248 [ scc.merge] INFO
2025-12-09 00:34:51,248 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:34:51,248 [ scc.merge] INFO
2025-12-09 00:34:51,248 [ scc.merge] INFO Repository: ome/omero-web-zarr
2025-12-09 00:34:51,248 [ scc.merge] INFO Excluded PRs:
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2025-12-09 00:34:51,248 [ scc.merge] INFO Updating 8f3c313..4e1e685
2025-12-09 00:34:51,248 [ scc.merge] INFO Previously merged:
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README'
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
2025-12-09 00:34:51,248 [ scc.merge] INFO
2025-12-09 00:34:51,248 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import'
2025-12-09 00:34:51,248 [ scc.merge] INFO
2025-12-09 00:34:51,248 [ scc.merge] INFO Conflicting PRs (not included):
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-12-09 00:34:51,248 [ scc.merge] INFO
2025-12-09 00:34:51,248 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2025-12-09 00:34:51,248 [ scc.merge] INFO Already up to date.
2025-12-09 00:34:51,248 [ scc.merge] INFO
2025-12-09 00:34:51,248 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:34:51,248 [ scc.merge] INFO
2025-12-09 00:34:51,248 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2025-12-09 00:34:51,248 [ scc.merge] INFO Already up to date.
2025-12-09 00:34:51,248 [ scc.merge] INFO
2025-12-09 00:34:51,248 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-12-09 00:34:51,248 [ scc.merge] INFO
2025-12-09 00:34:51,248 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2025-12-09 00:34:51,248 [ scc.merge] INFO Already up to date.
2025-12-09 00:34:51,248 [ scc.merge] INFO
2025-12-09 00:34:51,248 [ scc.merge] INFO Conflicting PRs (not included):
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2025-12-09 00:34:51,248 [ scc.merge] INFO
2025-12-09 00:34:51,248 [ scc.merge] INFO Repository: ome/scripts
2025-12-09 00:34:51,248 [ scc.merge] INFO Excluded PRs:
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-12-09 00:34:51,248 [ scc.merge] INFO Updating 4b4c755..18a9a75
2025-12-09 00:34:51,248 [ scc.merge] INFO Previously merged:
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label'
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix'
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes'
2025-12-09 00:34:51,248 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests'
2025-12-09 00:34:51,248 [ scc.merge] INFO
2025-12-09 00:34:51,249 [ scc.merge] INFO Merged PRs:
2025-12-09 00:34:51,249 [ scc.merge] INFO - PR 231 jburel 'Create Release '
2025-12-09 00:34:51,249 [ scc.merge] INFO
2025-12-09 00:34:51,249 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-12-09 00:34:51,249 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-12-09 00:34:51,251 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-12-09 00:34:51,253 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-12-09 00:34:51,255 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-12-09 00:34:51,257 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-12-09 00:34:51,259 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-12-09 00:34:51,261 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-12-09 00:34:51,263 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-12-09 00:34:51,265 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-12-09 00:34:51,267 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-12-09 00:34:51,269 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-12-09 00:34:51,271 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,272 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,272 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-12-09 00:34:51,272 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-12-09 00:34:51,274 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,276 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,276 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-12-09 00:34:51,276 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,278 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,278 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-12-09 00:34:51,278 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-12-09 00:34:51,280 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-12-09 00:34:51,282 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-12-09 00:34:51,284 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-12-09 00:34:51,286 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-12-09 00:34:51,288 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-12-09 00:34:51,290 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-12-09 00:34:51,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-12-09 00:34:51,292 [ scc.git] DEBUG Calling 'git remote'
2025-12-09 00:34:51,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.5-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 9e6ef67] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
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Entering 'omero-cli-render'
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Entering 'omero-cli-zarr'
HEAD detached from 11d3587
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
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Entering 'omero-fpbioimage'
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Entering 'omero-gallery'
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Entering 'omero-iviewer'
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Entering 'omero-mapr'
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Entering 'omero-metadata'
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Entering 'omero-parade'
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Entering 'omero-prometheus-tools'
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Entering 'omero-rois'
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Entering 'omero-signup'
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Entering 'omero-test-infra'
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Entering 'omero-upload'
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Entering 'omero-virtual-microscope'
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Entering 'omero-weberror'
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Entering 'omero-webtest'
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Entering 'rOMERO-gateway'
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[detached HEAD ecc68e6] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-12-09 00:35:37,721 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-12-09 00:35:47,291 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-12-09 00:35:49,755 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-12-09 00:35:54,377 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-12-09 00:36:34,948 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS