Started by upstream project "Trigger" build number 120 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 46d23a10cf256e32fdc6117450f4d20a3cff5c17 (refs/remotes/origin/master) Commit message: "Merge pull request #284 from ome/dependabot/submodules/omero-web-5a2cd79" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 46d23a10cf256e32fdc6117450f4d20a3cff5c17 # timeout=10 > git rev-list --no-walk 46d23a10cf256e32fdc6117450f4d20a3cff5c17 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 108 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.1.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.1.1 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.6.2-py3-none-any.whl (164 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.6.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-07-01 01:45:21,006 [ scc.config] DEBUG Found github.token 2024-07-01 01:45:21,011 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-01 01:45:21,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:45:21,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:45:22,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-01 01:45:22,036 [ scc.gh] DEBUG 4037 remaining from 5000 (Reset at 01:07 2024-07-01 01:45:22,037 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-01 01:45:22,041 [ scc.git] DEBUG Check current status 2024-07-01 01:45:22,041 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-01 01:45:22,045 [ scc.git] DEBUG 46d23a1 Merge pull request #284 from ome/dependabot/submodules/omero-web-5a2cd79 2024-07-01 01:45:22,045 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-01 01:45:22,088 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-07-01 01:45:22,090 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-07-01 01:45:22,094 [ scc.git] DEBUG 8d8108de02104c654741d65f0ecbbf11c85e329d omero-py (v5.19.3-1-g8d8108de) 2024-07-01 01:45:22,098 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273) 2024-07-01 01:45:22,133 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7) 2024-07-01 01:45:22,138 [ scc.config] DEBUG Found remote.origin.url 2024-07-01 01:45:22,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-07-01 01:45:23,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-01 01:45:23,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-01 01:45:23,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-01 01:45:24,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-01 01:45:24,291 [ scc.git] DEBUG Resetting... 2024-07-01 01:45:24,292 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-01 01:45:24,297 [ scc.git] DEBUG HEAD is now at 46d23a1 Merge pull request #284 from ome/dependabot/submodules/omero-web-5a2cd79 2024-07-01 01:45:24,298 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-01 01:45:24,353 [ scc.git] DEBUG Check current status 2024-07-01 01:45:24,353 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-01 01:45:24,359 [ scc.git] DEBUG 46d23a1 Merge pull request #284 from ome/dependabot/submodules/omero-web-5a2cd79 2024-07-01 01:45:24,359 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-01 01:45:24,406 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-07-01 01:45:24,409 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-07-01 01:45:24,413 [ scc.git] DEBUG 8d8108de02104c654741d65f0ecbbf11c85e329d omero-py (v5.19.3-1-g8d8108de) 2024-07-01 01:45:24,417 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273) 2024-07-01 01:45:24,420 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7) 2024-07-01 01:45:24,421 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-01 01:45:24,421 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-01 01:45:24,421 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-01 01:45:24,421 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-01 01:45:24,421 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-01 01:45:24,421 [ scc.repo] DEBUG ## PRs found: 2024-07-01 01:45:24,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-07-01 01:45:24,723 [ scc.repo] DEBUG ## Branches found: 2024-07-01 01:45:24,724 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:45:24,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:45:24,729 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-01 01:45:24,732 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-01 01:45:24,732 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-01 01:45:24,737 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-01 01:45:24,742 [ scc.git] DEBUG Already up to date. 2024-07-01 01:45:24,742 [ scc.git] DEBUG ## Unique users: [] 2024-07-01 01:45:24,742 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:45:24,742 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:45:24,746 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-01 01:45:24,786 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:45:24,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:45:24,791 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-01 01:45:25,076 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7eff934bb160> has no local changes 2024-07-01 01:45:25,077 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/106/)' 2024-07-01 01:45:25,105 [ scc.git] DEBUG [detached HEAD 7dbbf8e] merge master -Dorg -Snone 2024-07-01 01:45:25,105 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-07-01 01:45:25,105 [ scc.merge] INFO Already up to date. 2024-07-01 01:45:25,105 [ scc.merge] INFO 2024-07-01 01:45:25,106 [ scc.merge] INFO 2024-07-01 01:45:25,106 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-01 01:45:25,106 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-07-01 01:45:27,682 [ scc.config] DEBUG Found github.token 2024-07-01 01:45:27,685 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-01 01:45:27,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:45:28,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:45:28,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-01 01:45:28,687 [ scc.gh] DEBUG 4029 remaining from 5000 (Reset at 01:07 2024-07-01 01:45:28,688 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-01 01:45:28,691 [ scc.git] DEBUG Check current status 2024-07-01 01:45:28,692 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-01 01:45:28,696 [ scc.git] DEBUG 7dbbf8e merge master -Dorg -Snone 2024-07-01 01:45:28,696 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-01 01:45:28,739 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-07-01 01:45:28,742 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-07-01 01:45:28,745 [ scc.git] DEBUG 8d8108de02104c654741d65f0ecbbf11c85e329d omero-py (v5.19.3-1-g8d8108de) 2024-07-01 01:45:28,749 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273) 2024-07-01 01:45:28,752 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7) 2024-07-01 01:45:28,758 [ scc.config] DEBUG Found remote.origin.url 2024-07-01 01:45:28,758 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-07-01 01:45:28,760 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-07-01 01:45:29,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-07-01 01:45:29,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-01 01:45:30,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-01 01:45:30,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-01 01:45:30,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-01 01:45:30,908 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-01 01:45:30,954 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-07-01 01:45:30,955 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-01 01:45:30,959 [ scc.git] DEBUG Check current status 2024-07-01 01:45:30,959 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-01 01:45:30,963 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0 2024-07-01 01:45:30,964 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-01 01:45:31,007 [ scc.config] DEBUG Found remote.origin.url 2024-07-01 01:45:31,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2024-07-01 01:45:31,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-01 01:45:32,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-01 01:45:32,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-01 01:45:33,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-01 01:45:33,138 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-01 01:45:33,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-01 01:45:33,180 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-07-01 01:45:33,180 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-01 01:45:33,184 [ scc.git] DEBUG Check current status 2024-07-01 01:45:33,184 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-01 01:45:33,188 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312 2024-07-01 01:45:33,188 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-01 01:45:33,232 [ scc.config] DEBUG Found remote.origin.url 2024-07-01 01:45:33,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2024-07-01 01:45:34,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-01 01:45:34,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-01 01:45:34,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-01 01:45:35,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-01 01:45:35,373 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-01 01:45:35,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-01 01:45:35,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-07-01 01:45:35,413 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-01 01:45:35,416 [ scc.git] DEBUG Check current status 2024-07-01 01:45:35,417 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-01 01:45:35,433 [ scc.git] DEBUG 8d8108de Bump version: 5.19.3 → 5.19.4.dev0 2024-07-01 01:45:35,433 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-01 01:45:35,477 [ scc.config] DEBUG Found remote.origin.url 2024-07-01 01:45:35,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2024-07-01 01:45:36,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-01 01:45:36,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-01 01:45:37,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-01 01:45:37,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-01 01:45:37,582 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-01 01:45:37,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-01 01:45:37,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-07-01 01:45:37,625 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-01 01:45:37,629 [ scc.git] DEBUG Check current status 2024-07-01 01:45:37,630 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-01 01:45:37,664 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-01 01:45:37,664 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-01 01:45:37,707 [ scc.config] DEBUG Found remote.origin.url 2024-07-01 01:45:37,707 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-07-01 01:45:38,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2024-07-01 01:45:38,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-01 01:45:38,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-01 01:45:39,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-01 01:45:39,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-01 01:45:39,765 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-01 01:45:39,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-01 01:45:39,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-07-01 01:45:39,809 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-01 01:45:39,812 [ scc.git] DEBUG Check current status 2024-07-01 01:45:39,812 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-01 01:45:39,825 [ scc.git] DEBUG 5a2cd79d7 Merge pull request #561 from jburel/numpy_less_than_2 2024-07-01 01:45:39,826 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-01 01:45:39,869 [ scc.config] DEBUG Found remote.origin.url 2024-07-01 01:45:40,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2024-07-01 01:45:40,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-01 01:45:41,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-01 01:45:41,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-01 01:45:42,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-01 01:45:42,093 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-01 01:45:42,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-01 01:45:42,135 [ scc.git] DEBUG Resetting... 2024-07-01 01:45:42,135 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-01 01:45:42,140 [ scc.git] DEBUG HEAD is now at 7dbbf8e merge master -Dorg -Snone 2024-07-01 01:45:42,140 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-01 01:45:42,194 [ scc.git] DEBUG Check current status 2024-07-01 01:45:42,194 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-01 01:45:42,199 [ scc.git] DEBUG 7dbbf8e merge master -Dorg -Snone 2024-07-01 01:45:42,199 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-01 01:45:42,243 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-07-01 01:45:42,246 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-07-01 01:45:42,249 [ scc.git] DEBUG 8d8108de02104c654741d65f0ecbbf11c85e329d omero-py (v5.19.3-1-g8d8108de) 2024-07-01 01:45:42,253 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273) 2024-07-01 01:45:42,256 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7) 2024-07-01 01:45:42,257 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-01 01:45:42,257 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-01 01:45:42,257 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-01 01:45:42,257 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-01 01:45:42,257 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-01 01:45:42,257 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-07-01 01:45:42,257 [ scc.repo] DEBUG ## PRs found: 2024-07-01 01:45:42,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-07-01 01:45:42,505 [ scc.repo] DEBUG ## Branches found: 2024-07-01 01:45:42,505 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:45:42,505 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:45:42,509 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-01 01:45:42,513 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-01 01:45:42,513 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-01 01:45:42,517 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-01 01:45:42,521 [ scc.git] DEBUG Already up to date. 2024-07-01 01:45:42,521 [ scc.git] DEBUG ## Unique users: [] 2024-07-01 01:45:42,521 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:45:42,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:45:42,525 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-01 01:45:42,564 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:45:42,564 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:45:42,568 [ scc.repo] DEBUG ## PRs found: 2024-07-01 01:45:43,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2024-07-01 01:45:43,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2024-07-01 01:45:43,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2024-07-01 01:45:44,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-07-01 01:45:44,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:45:45,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-07-01 01:45:45,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2024-07-01 01:45:45,857 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-07-01 01:45:45,857 [ scc.repo] DEBUG ## Branches found: 2024-07-01 01:45:45,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-07-01 01:45:45,857 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:45:45,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:45:45,862 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-01 01:45:45,866 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-01 01:45:45,866 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-01 01:45:45,870 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-01 01:45:45,874 [ scc.git] DEBUG Already up to date. 2024-07-01 01:45:45,874 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2024-07-01 01:45:46,310 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-07-01 01:45:46,310 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2024-07-01 01:45:46,316 [ scc.git] DEBUG ## Unique users: [] 2024-07-01 01:45:46,316 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:45:46,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:45:46,320 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-07-01 01:45:46,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:45:46,328 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-07-01 01:45:46,341 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2024-07-01 01:45:46,342 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2024-07-01 01:45:46,342 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2024-07-01 01:45:46,342 [ scc.git] DEBUG Auto-merging src/fsLists.py 2024-07-01 01:45:46,342 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2024-07-01 01:45:46,342 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2024-07-01 01:45:46,342 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2024-07-01 01:45:46,342 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2024-07-01 01:45:46,342 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2024-07-01 01:45:46,342 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:45:46,346 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2024-07-01 01:45:46,346 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2024-07-01 01:45:46,346 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2024-07-01 01:45:46,346 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2024-07-01 01:45:46,346 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2024-07-01 01:45:46,346 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2024-07-01 01:45:46,346 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2024-07-01 01:45:46,346 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2024-07-01 01:45:46,346 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2024-07-01 01:45:46,346 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2024-07-01 01:45:46,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:45:46,507 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-01 01:45:46,548 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:45:46,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:45:46,553 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-01 01:45:46,592 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-01 01:45:46,597 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f110873e760> has no local changes 2024-07-01 01:45:46,598 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/106/)' 2024-07-01 01:45:46,606 [ scc.git] DEBUG [detached HEAD 979c6c4] merge master -Dorg -Ssuccess-only 2024-07-01 01:45:46,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-01 01:45:46,607 [ scc.repo] DEBUG ## PRs found: 2024-07-01 01:45:47,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2024-07-01 01:45:47,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2024-07-01 01:45:47,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2024-07-01 01:45:48,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-07-01 01:45:48,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:45:49,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:45:49,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-07-01 01:45:50,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2024-07-01 01:45:50,274 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2024-07-01 01:45:50,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2024-07-01 01:45:51,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2024-07-01 01:45:51,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2024-07-01 01:45:52,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2024-07-01 01:45:52,091 [ scc.repo] DEBUG ## Branches found: 2024-07-01 01:45:52,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-07-01 01:45:52,091 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:45:52,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:45:52,096 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-01 01:45:52,100 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-01 01:45:52,100 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-01 01:45:52,105 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-01 01:45:52,110 [ scc.git] DEBUG Already up to date. 2024-07-01 01:45:52,110 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2024-07-01 01:45:52,553 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-07-01 01:45:52,553 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2024-07-01 01:45:52,557 [ scc.git] DEBUG ## Unique users: [] 2024-07-01 01:45:52,558 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:45:52,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:45:52,562 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-07-01 01:45:52,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:45:52,570 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-07-01 01:45:52,599 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2024-07-01 01:45:52,600 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:45:52,603 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2024-07-01 01:45:52,603 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2024-07-01 01:45:52,603 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2024-07-01 01:45:52,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:45:52,780 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-01 01:45:52,819 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:45:52,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:45:52,823 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-01 01:45:52,863 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-01 01:45:52,870 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f11086d4a90> has no local changes 2024-07-01 01:45:52,870 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/106/)' 2024-07-01 01:45:52,879 [ scc.git] DEBUG [detached HEAD aa5e5d9] merge master -Dorg -Ssuccess-only 2024-07-01 01:45:52,879 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-01 01:45:52,880 [ scc.repo] DEBUG ## PRs found: 2024-07-01 01:45:53,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2024-07-01 01:45:53,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/418 HTTP/1.1" 200 None 2024-07-01 01:45:54,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/418/comments HTTP/1.1" 200 None 2024-07-01 01:45:54,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36 HTTP/1.1" 200 None 2024-07-01 01:45:55,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:45:55,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:45:56,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36 HTTP/1.1" 200 None 2024-07-01 01:45:56,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/8636894b410e1ed99ad9a9819673808c4589fe36?per_page=1 HTTP/1.1" 200 None 2024-07-01 01:45:57,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36 HTTP/1.1" 200 None 2024-07-01 01:45:57,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36/status HTTP/1.1" 200 None 2024-07-01 01:45:57,747 [ scc.repo] DEBUG - PR 418 chris-allan 'Allow a caller to ignore row numbers' 2024-07-01 01:45:58,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/417 HTTP/1.1" 200 None 2024-07-01 01:45:58,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/417/comments HTTP/1.1" 200 None 2024-07-01 01:45:59,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a HTTP/1.1" 200 None 2024-07-01 01:45:59,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:00,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:46:00,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a HTTP/1.1" 200 None 2024-07-01 01:46:00,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/78935e06b5466c326a526f704ad68bad8fcfdc3a?per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:01,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a HTTP/1.1" 200 None 2024-07-01 01:46:01,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a/status HTTP/1.1" 200 None 2024-07-01 01:46:01,876 [ scc.repo] DEBUG - PR 417 chris-allan 'Switch result logging to DEBUG level' 2024-07-01 01:46:02,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/416 HTTP/1.1" 200 None 2024-07-01 01:46:02,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183 HTTP/1.1" 200 None 2024-07-01 01:46:03,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:03,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:46:04,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183 HTTP/1.1" 200 None 2024-07-01 01:46:04,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183?per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:05,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183 HTTP/1.1" 200 None 2024-07-01 01:46:05,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183/status HTTP/1.1" 200 None 2024-07-01 01:46:05,568 [ scc.repo] DEBUG - PR 416 sbesson 'Parse omero.logging properties under new Logging heading' 2024-07-01 01:46:06,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/415 HTTP/1.1" 200 None 2024-07-01 01:46:06,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2024-07-01 01:46:06,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2024-07-01 01:46:07,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-07-01 01:46:07,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:08,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:46:08,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-07-01 01:46:09,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:09,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-07-01 01:46:10,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2024-07-01 01:46:10,215 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2024-07-01 01:46:10,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2024-07-01 01:46:11,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2024-07-01 01:46:11,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2024-07-01 01:46:12,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:12,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:46:12,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2024-07-01 01:46:13,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-07-01 01:46:13,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:14,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:46:14,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-07-01 01:46:15,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:15,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-07-01 01:46:16,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2024-07-01 01:46:16,286 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2024-07-01 01:46:16,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2024-07-01 01:46:16,744 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-07-01 01:46:17,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2024-07-01 01:46:17,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2024-07-01 01:46:18,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-07-01 01:46:18,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:19,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-07-01 01:46:19,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2024-07-01 01:46:19,514 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-07-01 01:46:19,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2024-07-01 01:46:20,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2024-07-01 01:46:20,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-07-01 01:46:21,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:21,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:46:22,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-07-01 01:46:22,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:23,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-07-01 01:46:23,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2024-07-01 01:46:23,762 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2024-07-01 01:46:24,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2024-07-01 01:46:24,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2024-07-01 01:46:25,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2024-07-01 01:46:25,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2024-07-01 01:46:26,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-07-01 01:46:26,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:27,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-07-01 01:46:27,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2024-07-01 01:46:27,418 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2024-07-01 01:46:27,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2024-07-01 01:46:28,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-07-01 01:46:28,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:29,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-07-01 01:46:29,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2024-07-01 01:46:29,677 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-07-01 01:46:30,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2024-07-01 01:46:30,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2024-07-01 01:46:31,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-07-01 01:46:31,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:32,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-07-01 01:46:32,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2024-07-01 01:46:32,496 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2024-07-01 01:46:32,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2024-07-01 01:46:33,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2024-07-01 01:46:34,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-07-01 01:46:34,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:34,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-07-01 01:46:35,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2024-07-01 01:46:35,413 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2024-07-01 01:46:35,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2024-07-01 01:46:36,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2024-07-01 01:46:36,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2024-07-01 01:46:37,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2024-07-01 01:46:37,262 [ scc.repo] DEBUG ## Branches found: 2024-07-01 01:46:37,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-07-01 01:46:37,263 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:46:37,263 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:37,269 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-01 01:46:37,274 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-01 01:46:37,275 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-01 01:46:37,281 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-01 01:46:37,288 [ scc.git] DEBUG Already up to date. 2024-07-01 01:46:37,288 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2024-07-01 01:46:37,874 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-01 01:46:37,874 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2024-07-01 01:46:37,880 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2024-07-01 01:46:38,290 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-01 01:46:38,290 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2024-07-01 01:46:38,297 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2024-07-01 01:46:38,679 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-01 01:46:38,679 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2024-07-01 01:46:38,685 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2024-07-01 01:46:39,028 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-01 01:46:39,028 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2024-07-01 01:46:39,035 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2024-07-01 01:46:39,415 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-01 01:46:39,416 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2024-07-01 01:46:39,421 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2024-07-01 01:46:39,782 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-01 01:46:39,783 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2024-07-01 01:46:39,787 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-07-01 01:46:40,156 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-01 01:46:40,157 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-07-01 01:46:40,161 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2024-07-01 01:46:40,575 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-01 01:46:40,576 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2024-07-01 01:46:40,581 [ scc.git] DEBUG Calling 'git fetch origin pull/416/head' 2024-07-01 01:46:40,946 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-01 01:46:40,946 [ scc.git] DEBUG * branch refs/pull/416/head -> FETCH_HEAD 2024-07-01 01:46:40,951 [ scc.git] DEBUG Calling 'git fetch origin pull/417/head' 2024-07-01 01:46:41,404 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-01 01:46:41,404 [ scc.git] DEBUG * branch refs/pull/417/head -> FETCH_HEAD 2024-07-01 01:46:41,409 [ scc.git] DEBUG Calling 'git fetch origin pull/418/head' 2024-07-01 01:46:41,782 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-01 01:46:41,783 [ scc.git] DEBUG * branch refs/pull/418/head -> FETCH_HEAD 2024-07-01 01:46:41,787 [ scc.git] DEBUG ## Unique users: [] 2024-07-01 01:46:41,787 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:46:41,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:41,792 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-07-01 01:46:41,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:41,808 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-07-01 01:46:41,866 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2024-07-01 01:46:41,867 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2024-07-01 01:46:41,867 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:46:41,872 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2024-07-01 01:46:41,872 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2024-07-01 01:46:41,872 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2024-07-01 01:46:42,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:46:42,029 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-07-01 01:46:42,041 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:42,046 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-07-01 01:46:42,215 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-07-01 01:46:42,216 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2024-07-01 01:46:42,217 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:46:42,227 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2024-07-01 01:46:42,228 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2024-07-01 01:46:42,228 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2024-07-01 01:46:42,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:46:42,427 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-07-01 01:46:42,439 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:42,443 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-07-01 01:46:42,515 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2024-07-01 01:46:42,516 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:46:42,519 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2024-07-01 01:46:42,520 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2024-07-01 01:46:42,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:46:42,834 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2024-07-01 01:46:42,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:42,850 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2024-07-01 01:46:42,926 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2024-07-01 01:46:42,926 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2024-07-01 01:46:42,928 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:46:42,932 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2024-07-01 01:46:42,932 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2024-07-01 01:46:42,932 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2024-07-01 01:46:43,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:46:43,245 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-07-01 01:46:43,261 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:43,266 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-07-01 01:46:43,297 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:46:43,300 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2024-07-01 01:46:43,300 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2024-07-01 01:46:43,300 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2024-07-01 01:46:43,300 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2024-07-01 01:46:43,300 [ scc.git] DEBUG create mode 100644 connect.py 2024-07-01 01:46:43,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:46:43,648 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-07-01 01:46:43,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:43,665 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-07-01 01:46:43,744 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2024-07-01 01:46:43,745 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:46:43,749 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2024-07-01 01:46:43,749 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-07-01 01:46:44,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:46:44,050 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2024-07-01 01:46:44,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:44,075 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2024-07-01 01:46:44,152 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-07-01 01:46:44,153 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:46:44,157 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2024-07-01 01:46:44,157 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2024-07-01 01:46:44,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:46:44,447 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-07-01 01:46:44,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:44,469 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-07-01 01:46:44,570 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-07-01 01:46:44,571 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:46:44,579 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2024-07-01 01:46:44,580 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2024-07-01 01:46:44,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:46:44,868 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1ab716157039f8bc7a30e9d0fd5e1d23ff9af183' 2024-07-01 01:46:44,880 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:44,885 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 416 (Parse omero.logging properties under new Logging heading) 1ab716157039f8bc7a30e9d0fd5e1d23ff9af183' 2024-07-01 01:46:44,939 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:46:44,942 [ scc.git] DEBUG src/omero/install/config_parser.py | 2 ++ 2024-07-01 01:46:44,942 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-07-01 01:46:45,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:46:45,272 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78935e06b5466c326a526f704ad68bad8fcfdc3a' 2024-07-01 01:46:45,284 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:45,288 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 417 (Switch result logging to DEBUG level) 78935e06b5466c326a526f704ad68bad8fcfdc3a' 2024-07-01 01:46:45,351 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:46:45,355 [ scc.git] DEBUG src/omero/util/decorators.py | 5 ++++- 2024-07-01 01:46:45,355 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 1 deletion(-) 2024-07-01 01:46:45,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:46:45,679 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8636894b410e1ed99ad9a9819673808c4589fe36' 2024-07-01 01:46:45,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:45,696 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 418 (Allow a caller to ignore row numbers) 8636894b410e1ed99ad9a9819673808c4589fe36' 2024-07-01 01:46:45,714 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:46:45,717 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 18 +++++++++++++----- 2024-07-01 01:46:45,717 [ scc.git] DEBUG 1 file changed, 13 insertions(+), 5 deletions(-) 2024-07-01 01:46:46,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:46:46,097 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-01 01:46:46,144 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:46:46,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:46,149 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-01 01:46:46,191 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-01 01:46:46,198 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f110873eb50> has no local changes 2024-07-01 01:46:46,198 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 415 barrettMCW 'Fix reconnection issue' (user: barrettMCW) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 416 sbesson 'Parse omero.logging properties under new Logging heading' - PR 417 chris-allan 'Switch result logging to DEBUG level' - PR 418 chris-allan 'Allow a caller to ignore row numbers' Generated by OMERO-python-superbuild-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/106/)' 2024-07-01 01:46:46,208 [ scc.git] DEBUG [detached HEAD 2ef1519d] merge master -Dorg -Ssuccess-only 2024-07-01 01:46:46,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-01 01:46:46,209 [ scc.git] INFO Overriding base-branch from master to develop 2024-07-01 01:46:46,209 [ scc.repo] DEBUG ## PRs found: 2024-07-01 01:46:46,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-07-01 01:46:47,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-07-01 01:46:47,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-07-01 01:46:48,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-07-01 01:46:48,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-07-01 01:46:49,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-07-01 01:46:49,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-07-01 01:46:50,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-01 01:46:50,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:51,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-01 01:46:51,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-07-01 01:46:51,479 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-01 01:46:51,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-07-01 01:46:52,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-07-01 01:46:52,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-07-01 01:46:53,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-07-01 01:46:53,378 [ scc.repo] DEBUG ## Branches found: 2024-07-01 01:46:53,378 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-07-01 01:46:53,378 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:46:53,378 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:53,383 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-07-01 01:46:53,387 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-01 01:46:53,387 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-07-01 01:46:53,392 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-07-01 01:46:53,397 [ scc.git] DEBUG Already up to date. 2024-07-01 01:46:53,398 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-07-01 01:46:53,800 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-07-01 01:46:53,801 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-07-01 01:46:53,808 [ scc.git] DEBUG ## Unique users: [] 2024-07-01 01:46:53,808 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:46:53,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:53,815 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-01 01:46:53,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:53,827 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-01 01:46:53,876 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-07-01 01:46:53,876 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-07-01 01:46:53,876 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-01 01:46:53,876 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-01 01:46:53,882 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-01 01:46:53,889 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-01 01:46:54,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:46:54,053 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-01 01:46:54,061 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-01 01:46:54,067 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#106](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/106/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/106/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-07-01 01:46:54,072 [ scc.config] DEBUG Found github.token 2024-07-01 01:46:54,072 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-07-01 01:46:54,073 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-01 01:46:54,122 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:46:54,123 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:46:54,128 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-01 01:46:54,170 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-01 01:46:54,176 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f11076565b0> has no local changes 2024-07-01 01:46:54,177 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/106/)' 2024-07-01 01:46:54,184 [ scc.git] DEBUG [detached HEAD fe30c09] merge master -Dorg -Ssuccess-only 2024-07-01 01:46:54,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-01 01:46:54,185 [ scc.repo] DEBUG ## PRs found: 2024-07-01 01:46:54,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2024-07-01 01:46:55,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/564 HTTP/1.1" 200 None 2024-07-01 01:46:55,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/564/comments HTTP/1.1" 200 None 2024-07-01 01:46:56,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/db885119d897d00078f1ea83ae8427dbe2d506c0 HTTP/1.1" 200 None 2024-07-01 01:46:56,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/db885119d897d00078f1ea83ae8427dbe2d506c0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:57,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/db885119d897d00078f1ea83ae8427dbe2d506c0/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:46:57,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/db885119d897d00078f1ea83ae8427dbe2d506c0 HTTP/1.1" 200 None 2024-07-01 01:46:58,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/db885119d897d00078f1ea83ae8427dbe2d506c0?per_page=1 HTTP/1.1" 200 None 2024-07-01 01:46:58,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/db885119d897d00078f1ea83ae8427dbe2d506c0 HTTP/1.1" 200 None 2024-07-01 01:46:59,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/db885119d897d00078f1ea83ae8427dbe2d506c0/status HTTP/1.1" 200 None 2024-07-01 01:46:59,019 [ scc.repo] DEBUG - PR 564 knabar 'New table API endpoints for lower level table access' 2024-07-01 01:46:59,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/563 HTTP/1.1" 200 None 2024-07-01 01:46:59,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/563/comments HTTP/1.1" 200 None 2024-07-01 01:47:00,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None 2024-07-01 01:47:00,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:47:01,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:47:01,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None 2024-07-01 01:47:02,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/af88a0cd2aa7d15d9b0dca1ce369060284551de7?per_page=1 HTTP/1.1" 200 None 2024-07-01 01:47:02,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None 2024-07-01 01:47:03,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/status HTTP/1.1" 200 None 2024-07-01 01:47:03,208 [ scc.repo] DEBUG - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS' 2024-07-01 01:47:03,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/562 HTTP/1.1" 200 None 2024-07-01 01:47:04,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/560 HTTP/1.1" 200 None 2024-07-01 01:47:04,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/560/comments HTTP/1.1" 200 None 2024-07-01 01:47:05,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None 2024-07-01 01:47:05,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:47:05,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:47:06,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None 2024-07-01 01:47:06,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/f92a4e2764982ace46474a82af4ad25bee9d8823?per_page=1 HTTP/1.1" 200 None 2024-07-01 01:47:07,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None 2024-07-01 01:47:07,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/status HTTP/1.1" 200 None 2024-07-01 01:47:07,756 [ scc.repo] DEBUG - PR 560 will-moore 'linkify supports urls that include $ character' 2024-07-01 01:47:08,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/558 HTTP/1.1" 200 None 2024-07-01 01:47:08,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None 2024-07-01 01:47:09,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:47:09,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:47:10,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None 2024-07-01 01:47:10,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/575f7bbc72aad997963937297f08156ca6f7dd5e?per_page=1 HTTP/1.1" 200 None 2024-07-01 01:47:11,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None 2024-07-01 01:47:11,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/status HTTP/1.1" 200 None 2024-07-01 01:47:11,521 [ scc.repo] DEBUG - PR 558 jburel 'Update readme' 2024-07-01 01:47:11,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555 HTTP/1.1" 200 None 2024-07-01 01:47:12,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555/comments HTTP/1.1" 200 None 2024-07-01 01:47:12,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None 2024-07-01 01:47:13,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:47:13,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:47:14,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None 2024-07-01 01:47:14,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/97e479b717e34179eceea2507d3e69a04b2fec1e?per_page=1 HTTP/1.1" 200 None 2024-07-01 01:47:15,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None 2024-07-01 01:47:15,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/status HTTP/1.1" 200 None 2024-07-01 01:47:15,721 [ scc.repo] DEBUG - PR 555 chris-allan 'Archive status' 2024-07-01 01:47:16,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None 2024-07-01 01:47:16,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554/comments HTTP/1.1" 200 None 2024-07-01 01:47:17,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b HTTP/1.1" 200 None 2024-07-01 01:47:17,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:47:18,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:47:18,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b HTTP/1.1" 200 None 2024-07-01 01:47:19,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b?per_page=1 HTTP/1.1" 200 None 2024-07-01 01:47:19,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b HTTP/1.1" 200 None 2024-07-01 01:47:19,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b/status HTTP/1.1" 200 None 2024-07-01 01:47:19,904 [ scc.repo] DEBUG - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' 2024-07-01 01:47:20,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2024-07-01 01:47:20,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2024-07-01 01:47:21,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2024-07-01 01:47:21,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2024-07-01 01:47:22,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-07-01 01:47:22,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:47:23,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:47:23,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-07-01 01:47:24,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2024-07-01 01:47:24,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-07-01 01:47:24,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2024-07-01 01:47:24,986 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-07-01 01:47:25,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2024-07-01 01:47:25,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2024-07-01 01:47:26,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-07-01 01:47:26,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:47:27,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:47:27,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-07-01 01:47:28,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2024-07-01 01:47:28,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-07-01 01:47:29,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2024-07-01 01:47:29,151 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2024-07-01 01:47:29,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2024-07-01 01:47:30,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2024-07-01 01:47:30,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2024-07-01 01:47:31,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-01 01:47:31,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-01 01:47:31,525 [ scc.repo] DEBUG ## Branches found: 2024-07-01 01:47:31,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-07-01 01:47:31,526 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:47:31,526 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:47:31,531 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-01 01:47:31,535 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-01 01:47:31,535 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-01 01:47:31,549 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-01 01:47:31,554 [ scc.git] DEBUG Already up to date. 2024-07-01 01:47:31,555 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2024-07-01 01:47:32,121 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-01 01:47:32,122 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2024-07-01 01:47:32,127 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2024-07-01 01:47:32,467 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-01 01:47:32,467 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2024-07-01 01:47:32,473 [ scc.git] DEBUG Calling 'git fetch origin pull/554/head' 2024-07-01 01:47:33,121 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-01 01:47:33,122 [ scc.git] DEBUG * branch refs/pull/554/head -> FETCH_HEAD 2024-07-01 01:47:33,127 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-07-01 01:47:33,895 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-01 01:47:33,895 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-07-01 01:47:33,901 [ scc.git] DEBUG Calling 'git fetch origin pull/558/head' 2024-07-01 01:47:34,307 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-01 01:47:34,307 [ scc.git] DEBUG * branch refs/pull/558/head -> FETCH_HEAD 2024-07-01 01:47:34,314 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head' 2024-07-01 01:47:34,701 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-01 01:47:34,702 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD 2024-07-01 01:47:34,706 [ scc.git] DEBUG Calling 'git fetch origin pull/563/head' 2024-07-01 01:47:35,078 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-01 01:47:35,078 [ scc.git] DEBUG * branch refs/pull/563/head -> FETCH_HEAD 2024-07-01 01:47:35,083 [ scc.git] DEBUG Calling 'git fetch origin pull/564/head' 2024-07-01 01:47:35,613 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-01 01:47:35,613 [ scc.git] DEBUG * branch refs/pull/564/head -> FETCH_HEAD 2024-07-01 01:47:35,619 [ scc.git] DEBUG ## Unique users: [] 2024-07-01 01:47:35,619 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:47:35,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:47:35,623 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-07-01 01:47:35,631 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:47:35,635 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-07-01 01:47:35,712 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-07-01 01:47:35,713 [ scc.git] DEBUG Auto-merging setup.py 2024-07-01 01:47:35,713 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:47:35,717 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2024-07-01 01:47:35,718 [ scc.git] DEBUG setup.py | 1 + 2024-07-01 01:47:35,718 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2024-07-01 01:47:35,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:47:35,863 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-07-01 01:47:35,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:47:35,876 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-07-01 01:47:35,899 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2024-07-01 01:47:35,899 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-07-01 01:47:35,900 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:47:35,905 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2024-07-01 01:47:35,905 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2024-07-01 01:47:35,905 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2024-07-01 01:47:36,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:47:36,274 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b' 2024-07-01 01:47:36,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:47:36,297 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 554 (Optimize obj_id_bitmask by using its own query) b9cd4921b058c60151dcca3fc9ee7b1a91e7bf0b' 2024-07-01 01:47:36,405 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:47:36,411 [ scc.git] DEBUG omeroweb/webgateway/views.py | 66 +++++++++++++++++++++++--------------------- 2024-07-01 01:47:36,411 [ scc.git] DEBUG test/unit/test_webgateway.py | 9 ++++-- 2024-07-01 01:47:36,411 [ scc.git] DEBUG 2 files changed, 40 insertions(+), 35 deletions(-) 2024-07-01 01:47:36,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:47:36,691 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...97e479b717e34179eceea2507d3e69a04b2fec1e' 2024-07-01 01:47:36,699 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:47:36,703 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Archive status) 97e479b717e34179eceea2507d3e69a04b2fec1e' 2024-07-01 01:47:36,722 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-07-01 01:47:36,723 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:47:36,728 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.tree.js | 3 +++ 2024-07-01 01:47:36,728 [ scc.git] DEBUG .../webclient/annotations/includes/core_metadata.html | 6 ++++++ 2024-07-01 01:47:36,728 [ scc.git] DEBUG omeroweb/webclient/tree.py | 10 ++++++++-- 2024-07-01 01:47:36,728 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 1 + 2024-07-01 01:47:36,728 [ scc.git] DEBUG 4 files changed, 18 insertions(+), 2 deletions(-) 2024-07-01 01:47:37,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:47:37,095 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...575f7bbc72aad997963937297f08156ca6f7dd5e' 2024-07-01 01:47:37,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:47:37,112 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 558 (Update readme) 575f7bbc72aad997963937297f08156ca6f7dd5e' 2024-07-01 01:47:37,148 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:47:37,152 [ scc.git] DEBUG README.rst | 42 +++++++++++++++++++++--------------------- 2024-07-01 01:47:37,152 [ scc.git] DEBUG 1 file changed, 21 insertions(+), 21 deletions(-) 2024-07-01 01:47:37,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:47:37,501 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f92a4e2764982ace46474a82af4ad25bee9d8823' 2024-07-01 01:47:37,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:47:37,513 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (linkify supports urls that include $ character) f92a4e2764982ace46474a82af4ad25bee9d8823' 2024-07-01 01:47:37,560 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:47:37,564 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2024-07-01 01:47:37,564 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-07-01 01:47:37,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:47:37,905 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...af88a0cd2aa7d15d9b0dca1ce369060284551de7' 2024-07-01 01:47:37,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:47:37,918 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 563 (Batch by MAX_TABLE_DOWNLOAD_ROWS) af88a0cd2aa7d15d9b0dca1ce369060284551de7' 2024-07-01 01:47:38,010 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py 2024-07-01 01:47:38,011 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:47:38,016 [ scc.git] DEBUG omeroweb/webgateway/views.py | 2 +- 2024-07-01 01:47:38,016 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-07-01 01:47:38,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:47:38,347 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...db885119d897d00078f1ea83ae8427dbe2d506c0' 2024-07-01 01:47:38,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:47:38,360 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 564 (New table API endpoints for lower level table access) db885119d897d00078f1ea83ae8427dbe2d506c0' 2024-07-01 01:47:38,384 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-07-01 01:47:38,384 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py 2024-07-01 01:47:38,386 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-01 01:47:38,391 [ scc.git] DEBUG omeroweb/settings.py | 7 +++ 2024-07-01 01:47:38,391 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 29 +++++++++ 2024-07-01 01:47:38,391 [ scc.git] DEBUG omeroweb/webgateway/views.py | 142 ++++++++++++++++++++++++++++++++++++++++++- 2024-07-01 01:47:38,391 [ scc.git] DEBUG 3 files changed, 177 insertions(+), 1 deletion(-) 2024-07-01 01:47:38,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:47:38,759 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-01 01:47:38,802 [ scc.git] DEBUG Get sha1 of %s 2024-07-01 01:47:38,802 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-01 01:47:38,807 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-01 01:47:38,844 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-01 01:47:38,854 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f11045da160> has no local changes 2024-07-01 01:47:38,854 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' - PR 555 chris-allan 'Archive status' - PR 558 jburel 'Update readme' - PR 560 will-moore 'linkify supports urls that include $ character' - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS' - PR 564 knabar 'New table API endpoints for lower level table access' Generated by OMERO-python-superbuild-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/106/)' 2024-07-01 01:47:38,866 [ scc.git] DEBUG [detached HEAD 04128b5e1] merge master -Dorg -Ssuccess-only 2024-07-01 01:47:38,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-01 01:47:38,866 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-01 01:47:38,913 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2024-07-01 01:47:39,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:47:39,174 [ scc.config] DEBUG Found submodule.omero-marshal.url 2024-07-01 01:47:39,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:47:39,581 [ scc.config] DEBUG Found submodule.omero-py.url 2024-07-01 01:47:39,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:47:39,986 [ scc.config] DEBUG Found submodule.omero-scripts.url 2024-07-01 01:47:40,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:47:40,398 [ scc.config] DEBUG Found submodule.omero-web.url 2024-07-01 01:47:40,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-01 01:47:40,793 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-01 01:47:40,821 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f110899c160> has local changes 2024-07-01 01:47:40,821 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 415 barrettMCW 'Fix reconnection issue' (user: barrettMCW) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 416 sbesson 'Parse omero.logging properties under new Logging heading' - PR 417 chris-allan 'Switch result logging to DEBUG level' - PR 418 chris-allan 'Allow a caller to ignore row numbers' Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' - PR 555 chris-allan 'Archive status' - PR 558 jburel 'Update readme' - PR 560 will-moore 'linkify supports urls that include $ character' - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS' - PR 564 knabar 'New table API endpoints for lower level table access' Generated by OMERO-python-superbuild-push#106 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/106/)' 2024-07-01 01:47:40,830 [ scc.git] DEBUG [detached HEAD a9850ac] merge master -Dorg -Ssuccess-only 2024-07-01 01:47:40,830 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-07-01 01:47:40,830 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2024-07-01 01:47:40,830 [ scc.merge] INFO Already up to date. 2024-07-01 01:47:40,830 [ scc.merge] INFO 2024-07-01 01:47:40,831 [ scc.merge] INFO 2024-07-01 01:47:40,831 [ scc.merge] INFO Repository: ome/omero-dropbox 2024-07-01 01:47:40,831 [ scc.merge] INFO Already up to date. 2024-07-01 01:47:40,831 [ scc.merge] INFO 2024-07-01 01:47:40,831 [ scc.merge] INFO Merged PRs: 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-07-01 01:47:40,831 [ scc.merge] INFO 2024-07-01 01:47:40,831 [ scc.merge] INFO Repository: ome/omero-marshal 2024-07-01 01:47:40,831 [ scc.merge] INFO Excluded PRs: 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2024-07-01 01:47:40,831 [ scc.merge] INFO Already up to date. 2024-07-01 01:47:40,831 [ scc.merge] INFO 2024-07-01 01:47:40,831 [ scc.merge] INFO Merged PRs: 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2024-07-01 01:47:40,831 [ scc.merge] INFO 2024-07-01 01:47:40,831 [ scc.merge] INFO Repository: ome/omero-py 2024-07-01 01:47:40,831 [ scc.merge] INFO Excluded PRs: 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 415 barrettMCW 'Fix reconnection issue' (user: barrettMCW) 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2024-07-01 01:47:40,831 [ scc.merge] INFO Already up to date. 2024-07-01 01:47:40,831 [ scc.merge] INFO 2024-07-01 01:47:40,831 [ scc.merge] INFO Merged PRs: 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 416 sbesson 'Parse omero.logging properties under new Logging heading' 2024-07-01 01:47:40,831 [ scc.merge] INFO - PR 417 chris-allan 'Switch result logging to DEBUG level' 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 418 chris-allan 'Allow a caller to ignore row numbers' 2024-07-01 01:47:40,832 [ scc.merge] INFO 2024-07-01 01:47:40,832 [ scc.merge] INFO Repository: ome/omero-scripts 2024-07-01 01:47:40,832 [ scc.merge] INFO Excluded PRs: 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-07-01 01:47:40,832 [ scc.merge] INFO Already up to date. 2024-07-01 01:47:40,832 [ scc.merge] INFO 2024-07-01 01:47:40,832 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-01 01:47:40,832 [ scc.merge] INFO 2024-07-01 01:47:40,832 [ scc.merge] INFO Repository: ome/omero-web 2024-07-01 01:47:40,832 [ scc.merge] INFO Excluded PRs: 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2024-07-01 01:47:40,832 [ scc.merge] INFO Already up to date. 2024-07-01 01:47:40,832 [ scc.merge] INFO 2024-07-01 01:47:40,832 [ scc.merge] INFO Merged PRs: 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 555 chris-allan 'Archive status' 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 558 jburel 'Update readme' 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 560 will-moore 'linkify supports urls that include $ character' 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS' 2024-07-01 01:47:40,832 [ scc.merge] INFO - PR 564 knabar 'New table API endpoints for lower level table access' 2024-07-01 01:47:40,832 [ scc.merge] INFO 2024-07-01 01:47:40,832 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-01 01:47:40,832 [ scc.git] DEBUG Calling 'git remote' 2024-07-01 01:47:40,836 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-07-01 01:47:40,836 [ scc.git] DEBUG Calling 'git remote' 2024-07-01 01:47:40,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-01 01:47:40,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-07-01 01:47:40,840 [ scc.git] DEBUG Calling 'git remote' 2024-07-01 01:47:40,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-01 01:47:40,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-07-01 01:47:40,844 [ scc.git] DEBUG Calling 'git remote' 2024-07-01 01:47:40,848 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-01 01:47:40,848 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-07-01 01:47:40,848 [ scc.git] DEBUG Calling 'git remote' 2024-07-01 01:47:40,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-01 01:47:40,852 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-07-01 01:47:40,852 [ scc.git] DEBUG Calling 'git remote' 2024-07-01 01:47:40,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from a4307f4 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from cca4c2f nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 8d8108de nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from c20d273 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 5a2cd79d7 nothing to commit, working tree clean HEAD detached from 46d23a1 nothing to commit, working tree clean 2024-07-01 01:48:22,088 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS