Started by upstream project "Trigger" build number 134 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 46d23a10cf256e32fdc6117450f4d20a3cff5c17 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 46d23a10cf256e32fdc6117450f4d20a3cff5c17 # timeout=10 Commit message: "Merge pull request #284 from ome/dependabot/submodules/omero-web-5a2cd79" > git rev-list --no-walk 46d23a10cf256e32fdc6117450f4d20a3cff5c17 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 Copied 1 artifact from "OMERO-build-push" build number 116 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.1.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.1.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.7.4-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.7.4-py3-none-any.whl (162 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.7.4 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-07-11 00:36:35,257 [ scc.config] DEBUG Found github.token 2024-07-11 00:36:35,260 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-11 00:36:35,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:36:35,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:36:36,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-11 00:36:36,273 [ scc.gh] DEBUG 4342 remaining from 5000 (Reset at 00:07 2024-07-11 00:36:36,274 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 00:36:36,279 [ scc.git] DEBUG Check current status 2024-07-11 00:36:36,279 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 00:36:36,284 [ scc.git] DEBUG 46d23a1 Merge pull request #284 from ome/dependabot/submodules/omero-web-5a2cd79 2024-07-11 00:36:36,284 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 00:36:36,332 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-07-11 00:36:36,336 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-07-11 00:36:36,340 [ scc.git] DEBUG 8d8108de02104c654741d65f0ecbbf11c85e329d omero-py (v5.19.3-1-g8d8108de) 2024-07-11 00:36:36,344 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273) 2024-07-11 00:36:36,385 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7) 2024-07-11 00:36:36,391 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 00:36:36,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-07-11 00:36:37,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 00:36:37,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 00:36:38,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 00:36:38,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 00:36:38,467 [ scc.git] DEBUG Resetting... 2024-07-11 00:36:38,467 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-11 00:36:38,474 [ scc.git] DEBUG HEAD is now at 46d23a1 Merge pull request #284 from ome/dependabot/submodules/omero-web-5a2cd79 2024-07-11 00:36:38,474 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-11 00:36:38,535 [ scc.git] DEBUG Check current status 2024-07-11 00:36:38,535 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 00:36:38,541 [ scc.git] DEBUG 46d23a1 Merge pull request #284 from ome/dependabot/submodules/omero-web-5a2cd79 2024-07-11 00:36:38,541 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 00:36:38,587 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-07-11 00:36:38,590 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-07-11 00:36:38,595 [ scc.git] DEBUG 8d8108de02104c654741d65f0ecbbf11c85e329d omero-py (v5.19.3-1-g8d8108de) 2024-07-11 00:36:38,599 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273) 2024-07-11 00:36:38,603 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7) 2024-07-11 00:36:38,604 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-11 00:36:38,604 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-11 00:36:38,604 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-11 00:36:38,604 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-11 00:36:38,604 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-11 00:36:38,604 [ scc.repo] DEBUG ## PRs found: 2024-07-11 00:36:38,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-07-11 00:36:38,910 [ scc.repo] DEBUG ## Branches found: 2024-07-11 00:36:38,910 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:36:38,910 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:36:38,915 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 00:36:38,920 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 00:36:38,920 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 00:36:38,926 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 00:36:38,931 [ scc.git] DEBUG Already up to date. 2024-07-11 00:36:38,932 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 00:36:38,932 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:36:38,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:36:38,937 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 00:36:38,983 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:36:38,983 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:36:38,988 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 00:36:39,179 [ scc.git] DEBUG has no local changes 2024-07-11 00:36:39,179 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#112 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/112/)' 2024-07-11 00:36:39,208 [ scc.git] DEBUG [detached HEAD a05fad1] merge master -Dorg -Snone 2024-07-11 00:36:39,208 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-07-11 00:36:39,208 [ scc.merge] INFO Already up to date. 2024-07-11 00:36:39,208 [ scc.merge] INFO 2024-07-11 00:36:39,208 [ scc.merge] INFO 2024-07-11 00:36:39,208 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-11 00:36:39,209 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-07-11 00:36:41,761 [ scc.config] DEBUG Found github.token 2024-07-11 00:36:41,764 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-11 00:36:41,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:36:42,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:36:42,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-11 00:36:42,795 [ scc.gh] DEBUG 4334 remaining from 5000 (Reset at 00:07 2024-07-11 00:36:42,796 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 00:36:42,800 [ scc.git] DEBUG Check current status 2024-07-11 00:36:42,801 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 00:36:42,805 [ scc.git] DEBUG a05fad1 merge master -Dorg -Snone 2024-07-11 00:36:42,805 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 00:36:42,853 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-07-11 00:36:42,857 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-07-11 00:36:42,861 [ scc.git] DEBUG 8d8108de02104c654741d65f0ecbbf11c85e329d omero-py (v5.19.3-1-g8d8108de) 2024-07-11 00:36:42,866 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273) 2024-07-11 00:36:42,871 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7) 2024-07-11 00:36:42,876 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 00:36:42,877 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-07-11 00:36:42,878 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-07-11 00:36:43,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-07-11 00:36:43,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 00:36:44,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 00:36:44,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 00:36:44,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 00:36:45,000 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 00:36:45,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-07-11 00:36:45,063 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 00:36:45,067 [ scc.git] DEBUG Check current status 2024-07-11 00:36:45,067 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 00:36:45,071 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0 2024-07-11 00:36:45,072 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 00:36:45,120 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 00:36:45,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2024-07-11 00:36:45,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 00:36:46,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 00:36:46,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 00:36:47,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 00:36:47,217 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 00:36:47,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-11 00:36:47,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-07-11 00:36:47,299 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 00:36:47,303 [ scc.git] DEBUG Check current status 2024-07-11 00:36:47,303 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 00:36:47,307 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312 2024-07-11 00:36:47,308 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 00:36:47,348 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 00:36:47,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2024-07-11 00:36:48,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 00:36:48,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 00:36:48,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 00:36:49,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 00:36:49,388 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 00:36:49,428 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-11 00:36:49,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-07-11 00:36:49,430 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 00:36:49,434 [ scc.git] DEBUG Check current status 2024-07-11 00:36:49,434 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 00:36:49,450 [ scc.git] DEBUG 8d8108de Bump version: 5.19.3 → 5.19.4.dev0 2024-07-11 00:36:49,450 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 00:36:49,499 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 00:36:49,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2024-07-11 00:36:50,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 00:36:50,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 00:36:51,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 00:36:51,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 00:36:51,533 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 00:36:51,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-11 00:36:51,578 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-07-11 00:36:51,578 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 00:36:51,583 [ scc.git] DEBUG Check current status 2024-07-11 00:36:51,583 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 00:36:51,601 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-11 00:36:51,602 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 00:36:51,653 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 00:36:51,654 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-07-11 00:36:52,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2024-07-11 00:36:52,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 00:36:52,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 00:36:53,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 00:36:53,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 00:36:53,702 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 00:36:53,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-11 00:36:53,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-07-11 00:36:53,750 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 00:36:53,755 [ scc.git] DEBUG Check current status 2024-07-11 00:36:53,755 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 00:36:53,779 [ scc.git] DEBUG 5a2cd79d7 Merge pull request #561 from jburel/numpy_less_than_2 2024-07-11 00:36:53,780 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 00:36:53,831 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 00:36:54,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2024-07-11 00:36:54,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 00:36:55,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 00:36:55,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 00:36:55,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 00:36:55,900 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 00:36:55,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-11 00:36:55,943 [ scc.git] DEBUG Resetting... 2024-07-11 00:36:55,943 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-11 00:36:55,949 [ scc.git] DEBUG HEAD is now at a05fad1 merge master -Dorg -Snone 2024-07-11 00:36:55,949 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-11 00:36:56,006 [ scc.git] DEBUG Check current status 2024-07-11 00:36:56,006 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 00:36:56,011 [ scc.git] DEBUG a05fad1 merge master -Dorg -Snone 2024-07-11 00:36:56,011 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 00:36:56,057 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-07-11 00:36:56,061 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-07-11 00:36:56,065 [ scc.git] DEBUG 8d8108de02104c654741d65f0ecbbf11c85e329d omero-py (v5.19.3-1-g8d8108de) 2024-07-11 00:36:56,070 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273) 2024-07-11 00:36:56,074 [ scc.git] DEBUG 5a2cd79d7cb7847d560e98f1d11240794e7be47f omero-web (v5.26.0-3-g5a2cd79d7) 2024-07-11 00:36:56,075 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-11 00:36:56,075 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-11 00:36:56,075 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-11 00:36:56,075 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-11 00:36:56,075 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-11 00:36:56,075 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-07-11 00:36:56,075 [ scc.repo] DEBUG ## PRs found: 2024-07-11 00:36:56,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-07-11 00:36:56,341 [ scc.repo] DEBUG ## Branches found: 2024-07-11 00:36:56,341 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:36:56,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:36:56,346 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 00:36:56,349 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 00:36:56,350 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 00:36:56,354 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 00:36:56,358 [ scc.git] DEBUG Already up to date. 2024-07-11 00:36:56,359 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 00:36:56,359 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:36:56,359 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:36:56,363 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 00:36:56,416 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:36:56,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:36:56,421 [ scc.repo] DEBUG ## PRs found: 2024-07-11 00:36:56,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2024-07-11 00:36:57,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2024-07-11 00:36:57,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2024-07-11 00:36:58,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-07-11 00:36:58,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:36:59,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-07-11 00:36:59,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2024-07-11 00:36:59,815 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-07-11 00:36:59,816 [ scc.repo] DEBUG ## Branches found: 2024-07-11 00:36:59,816 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-07-11 00:36:59,816 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:36:59,816 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:36:59,821 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 00:36:59,825 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 00:36:59,825 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 00:36:59,830 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 00:36:59,835 [ scc.git] DEBUG Already up to date. 2024-07-11 00:36:59,835 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2024-07-11 00:37:00,218 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-07-11 00:37:00,218 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2024-07-11 00:37:00,224 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 00:37:00,224 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:37:00,224 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:37:00,230 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-07-11 00:37:00,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:37:00,243 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-07-11 00:37:00,385 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2024-07-11 00:37:00,385 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2024-07-11 00:37:00,385 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2024-07-11 00:37:00,385 [ scc.git] DEBUG Auto-merging src/fsLists.py 2024-07-11 00:37:00,385 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2024-07-11 00:37:00,385 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2024-07-11 00:37:00,385 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2024-07-11 00:37:00,385 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2024-07-11 00:37:00,386 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2024-07-11 00:37:00,386 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:37:00,390 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2024-07-11 00:37:00,390 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2024-07-11 00:37:00,390 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2024-07-11 00:37:00,390 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2024-07-11 00:37:00,390 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2024-07-11 00:37:00,390 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2024-07-11 00:37:00,390 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2024-07-11 00:37:00,390 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2024-07-11 00:37:00,390 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2024-07-11 00:37:00,390 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2024-07-11 00:37:00,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:37:00,551 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 00:37:00,599 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:37:00,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:37:00,605 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 00:37:00,655 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 00:37:00,662 [ scc.git] DEBUG has no local changes 2024-07-11 00:37:00,662 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#112 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/112/)' 2024-07-11 00:37:00,673 [ scc.git] DEBUG [detached HEAD cf96edd] merge master -Dorg -Ssuccess-only 2024-07-11 00:37:00,673 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-11 00:37:00,673 [ scc.repo] DEBUG ## PRs found: 2024-07-11 00:37:01,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2024-07-11 00:37:01,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2024-07-11 00:37:02,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2024-07-11 00:37:02,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-07-11 00:37:03,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:03,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-07-11 00:37:03,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2024-07-11 00:37:03,964 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2024-07-11 00:37:04,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2024-07-11 00:37:04,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2024-07-11 00:37:05,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2024-07-11 00:37:05,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2024-07-11 00:37:05,826 [ scc.repo] DEBUG ## Branches found: 2024-07-11 00:37:05,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-07-11 00:37:05,827 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:37:05,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:37:05,832 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 00:37:05,838 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 00:37:05,839 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 00:37:05,846 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 00:37:05,854 [ scc.git] DEBUG Already up to date. 2024-07-11 00:37:05,855 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2024-07-11 00:37:06,259 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-07-11 00:37:06,259 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2024-07-11 00:37:06,267 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 00:37:06,268 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:37:06,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:37:06,274 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-07-11 00:37:06,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:37:06,289 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-07-11 00:37:06,304 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2024-07-11 00:37:06,305 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:37:06,309 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2024-07-11 00:37:06,310 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2024-07-11 00:37:06,314 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2024-07-11 00:37:06,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:37:06,471 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 00:37:06,553 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:37:06,554 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:37:06,561 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 00:37:06,627 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 00:37:06,637 [ scc.git] DEBUG has no local changes 2024-07-11 00:37:06,638 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#112 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/112/)' 2024-07-11 00:37:06,651 [ scc.git] DEBUG [detached HEAD d8be08b] merge master -Dorg -Ssuccess-only 2024-07-11 00:37:06,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-11 00:37:06,652 [ scc.repo] DEBUG ## PRs found: 2024-07-11 00:37:07,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2024-07-11 00:37:07,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/419 HTTP/1.1" 200 None 2024-07-11 00:37:08,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c7f2c9f7a4aa872c310b46e1ab27474c1058f4df HTTP/1.1" 200 None 2024-07-11 00:37:08,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c7f2c9f7a4aa872c310b46e1ab27474c1058f4df/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:09,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c7f2c9f7a4aa872c310b46e1ab27474c1058f4df/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:37:09,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c7f2c9f7a4aa872c310b46e1ab27474c1058f4df HTTP/1.1" 200 None 2024-07-11 00:37:10,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c7f2c9f7a4aa872c310b46e1ab27474c1058f4df?per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:10,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c7f2c9f7a4aa872c310b46e1ab27474c1058f4df HTTP/1.1" 200 None 2024-07-11 00:37:11,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c7f2c9f7a4aa872c310b46e1ab27474c1058f4df/status HTTP/1.1" 200 None 2024-07-11 00:37:11,038 [ scc.repo] DEBUG - PR 419 sbesson 'admin rewrite: make OMERO.tables module configurable' 2024-07-11 00:37:11,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/418 HTTP/1.1" 200 None 2024-07-11 00:37:11,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/418/comments HTTP/1.1" 200 None 2024-07-11 00:37:12,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36 HTTP/1.1" 200 None 2024-07-11 00:37:12,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:13,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:37:13,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36 HTTP/1.1" 200 None 2024-07-11 00:37:14,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/8636894b410e1ed99ad9a9819673808c4589fe36?per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:14,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36 HTTP/1.1" 200 None 2024-07-11 00:37:15,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8636894b410e1ed99ad9a9819673808c4589fe36/status HTTP/1.1" 200 None 2024-07-11 00:37:15,249 [ scc.repo] DEBUG - PR 418 chris-allan 'Allow a caller to ignore row numbers' 2024-07-11 00:37:15,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/417 HTTP/1.1" 200 None 2024-07-11 00:37:16,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/417/comments HTTP/1.1" 200 None 2024-07-11 00:37:16,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a HTTP/1.1" 200 None 2024-07-11 00:37:17,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:17,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:37:18,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a HTTP/1.1" 200 None 2024-07-11 00:37:18,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/78935e06b5466c326a526f704ad68bad8fcfdc3a?per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:18,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a HTTP/1.1" 200 None 2024-07-11 00:37:19,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/78935e06b5466c326a526f704ad68bad8fcfdc3a/status HTTP/1.1" 200 None 2024-07-11 00:37:19,389 [ scc.repo] DEBUG - PR 417 chris-allan 'Switch result logging to DEBUG level' 2024-07-11 00:37:19,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/416 HTTP/1.1" 200 None 2024-07-11 00:37:20,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183 HTTP/1.1" 200 None 2024-07-11 00:37:20,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:21,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:37:21,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183 HTTP/1.1" 200 None 2024-07-11 00:37:22,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183?per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:22,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183 HTTP/1.1" 200 None 2024-07-11 00:37:23,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1ab716157039f8bc7a30e9d0fd5e1d23ff9af183/status HTTP/1.1" 200 None 2024-07-11 00:37:23,118 [ scc.repo] DEBUG - PR 416 sbesson 'Parse omero.logging properties under new Logging heading' 2024-07-11 00:37:23,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/415 HTTP/1.1" 200 None 2024-07-11 00:37:24,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2024-07-11 00:37:24,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2024-07-11 00:37:24,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-07-11 00:37:25,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:25,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:37:26,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-07-11 00:37:26,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:27,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-07-11 00:37:27,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2024-07-11 00:37:27,814 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2024-07-11 00:37:28,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2024-07-11 00:37:28,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2024-07-11 00:37:29,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2024-07-11 00:37:29,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:30,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:37:30,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2024-07-11 00:37:31,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-07-11 00:37:31,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:32,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:37:32,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-07-11 00:37:33,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:33,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-07-11 00:37:33,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2024-07-11 00:37:33,981 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2024-07-11 00:37:34,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2024-07-11 00:37:34,446 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-07-11 00:37:34,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2024-07-11 00:37:35,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2024-07-11 00:37:35,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-07-11 00:37:36,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:36,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-07-11 00:37:37,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2024-07-11 00:37:37,253 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-07-11 00:37:37,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2024-07-11 00:37:38,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2024-07-11 00:37:38,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-07-11 00:37:39,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:39,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:37:40,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-07-11 00:37:40,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:41,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-07-11 00:37:41,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2024-07-11 00:37:41,505 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2024-07-11 00:37:41,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2024-07-11 00:37:42,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2024-07-11 00:37:42,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2024-07-11 00:37:43,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2024-07-11 00:37:43,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-07-11 00:37:44,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:44,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-07-11 00:37:45,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2024-07-11 00:37:45,277 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2024-07-11 00:37:45,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2024-07-11 00:37:46,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-07-11 00:37:46,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:47,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-07-11 00:37:47,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2024-07-11 00:37:47,592 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-07-11 00:37:48,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2024-07-11 00:37:48,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2024-07-11 00:37:49,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-07-11 00:37:49,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:50,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-07-11 00:37:50,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2024-07-11 00:37:50,455 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2024-07-11 00:37:50,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2024-07-11 00:37:51,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2024-07-11 00:37:51,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-07-11 00:37:52,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:37:52,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-07-11 00:37:53,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2024-07-11 00:37:53,326 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2024-07-11 00:37:53,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2024-07-11 00:37:54,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2024-07-11 00:37:54,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2024-07-11 00:37:55,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2024-07-11 00:37:55,187 [ scc.repo] DEBUG ## Branches found: 2024-07-11 00:37:55,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-07-11 00:37:55,187 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:37:55,187 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:37:55,193 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 00:37:55,198 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 00:37:55,198 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 00:37:55,203 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 00:37:55,207 [ scc.git] DEBUG Already up to date. 2024-07-11 00:37:55,208 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2024-07-11 00:37:55,867 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-11 00:37:55,868 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2024-07-11 00:37:55,873 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2024-07-11 00:37:56,257 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-11 00:37:56,257 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2024-07-11 00:37:56,263 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2024-07-11 00:37:56,648 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-11 00:37:56,648 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2024-07-11 00:37:56,654 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2024-07-11 00:37:57,067 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-11 00:37:57,067 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2024-07-11 00:37:57,072 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2024-07-11 00:37:57,484 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-11 00:37:57,484 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2024-07-11 00:37:57,492 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2024-07-11 00:37:57,839 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-11 00:37:57,839 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2024-07-11 00:37:57,845 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-07-11 00:37:58,237 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-11 00:37:58,238 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-07-11 00:37:58,243 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2024-07-11 00:37:58,656 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-11 00:37:58,657 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2024-07-11 00:37:58,662 [ scc.git] DEBUG Calling 'git fetch origin pull/416/head' 2024-07-11 00:37:59,054 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-11 00:37:59,054 [ scc.git] DEBUG * branch refs/pull/416/head -> FETCH_HEAD 2024-07-11 00:37:59,060 [ scc.git] DEBUG Calling 'git fetch origin pull/417/head' 2024-07-11 00:37:59,588 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-11 00:37:59,588 [ scc.git] DEBUG * branch refs/pull/417/head -> FETCH_HEAD 2024-07-11 00:37:59,594 [ scc.git] DEBUG Calling 'git fetch origin pull/418/head' 2024-07-11 00:38:00,071 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-11 00:38:00,071 [ scc.git] DEBUG * branch refs/pull/418/head -> FETCH_HEAD 2024-07-11 00:38:00,077 [ scc.git] DEBUG Calling 'git fetch origin pull/419/head' 2024-07-11 00:38:00,494 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-07-11 00:38:00,494 [ scc.git] DEBUG * branch refs/pull/419/head -> FETCH_HEAD 2024-07-11 00:38:00,500 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 00:38:00,500 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:38:00,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:00,507 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-07-11 00:38:00,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:00,524 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-07-11 00:38:00,610 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2024-07-11 00:38:00,611 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2024-07-11 00:38:00,611 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:00,616 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2024-07-11 00:38:00,616 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2024-07-11 00:38:00,616 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2024-07-11 00:38:00,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:00,772 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-07-11 00:38:00,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:00,790 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-07-11 00:38:00,940 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-07-11 00:38:00,940 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2024-07-11 00:38:00,941 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:00,949 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2024-07-11 00:38:00,950 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2024-07-11 00:38:00,950 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2024-07-11 00:38:01,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:01,189 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-07-11 00:38:01,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:01,207 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-07-11 00:38:01,286 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2024-07-11 00:38:01,287 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:01,290 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2024-07-11 00:38:01,290 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2024-07-11 00:38:01,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:01,687 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2024-07-11 00:38:01,701 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:01,707 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2024-07-11 00:38:01,787 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2024-07-11 00:38:01,787 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2024-07-11 00:38:01,788 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:01,793 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2024-07-11 00:38:01,793 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2024-07-11 00:38:01,794 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2024-07-11 00:38:02,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:02,099 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-07-11 00:38:02,113 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:02,119 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-07-11 00:38:02,153 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:02,156 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2024-07-11 00:38:02,156 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2024-07-11 00:38:02,156 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2024-07-11 00:38:02,156 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2024-07-11 00:38:02,156 [ scc.git] DEBUG create mode 100644 connect.py 2024-07-11 00:38:02,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:02,517 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-07-11 00:38:02,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:02,536 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-07-11 00:38:02,619 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2024-07-11 00:38:02,621 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:02,625 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2024-07-11 00:38:02,625 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-07-11 00:38:02,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:02,944 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2024-07-11 00:38:02,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:02,965 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2024-07-11 00:38:03,038 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-07-11 00:38:03,039 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:03,044 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2024-07-11 00:38:03,044 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2024-07-11 00:38:03,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:03,361 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-07-11 00:38:03,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:03,378 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-07-11 00:38:03,478 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-07-11 00:38:03,479 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:03,487 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2024-07-11 00:38:03,487 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2024-07-11 00:38:03,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:03,774 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1ab716157039f8bc7a30e9d0fd5e1d23ff9af183' 2024-07-11 00:38:03,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:03,794 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 416 (Parse omero.logging properties under new Logging heading) 1ab716157039f8bc7a30e9d0fd5e1d23ff9af183' 2024-07-11 00:38:03,882 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:03,886 [ scc.git] DEBUG src/omero/install/config_parser.py | 2 ++ 2024-07-11 00:38:03,886 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-07-11 00:38:04,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:04,186 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78935e06b5466c326a526f704ad68bad8fcfdc3a' 2024-07-11 00:38:04,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:04,204 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 417 (Switch result logging to DEBUG level) 78935e06b5466c326a526f704ad68bad8fcfdc3a' 2024-07-11 00:38:04,278 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:04,282 [ scc.git] DEBUG src/omero/util/decorators.py | 5 ++++- 2024-07-11 00:38:04,282 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 1 deletion(-) 2024-07-11 00:38:04,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:04,628 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8636894b410e1ed99ad9a9819673808c4589fe36' 2024-07-11 00:38:04,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:04,645 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 418 (Allow a caller to ignore row numbers) 8636894b410e1ed99ad9a9819673808c4589fe36' 2024-07-11 00:38:04,696 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:04,700 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 18 +++++++++++++----- 2024-07-11 00:38:04,700 [ scc.git] DEBUG 1 file changed, 13 insertions(+), 5 deletions(-) 2024-07-11 00:38:05,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:05,034 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c7f2c9f7a4aa872c310b46e1ab27474c1058f4df' 2024-07-11 00:38:05,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:05,053 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 419 (admin rewrite: make OMERO.tables module configurable) c7f2c9f7a4aa872c310b46e1ab27474c1058f4df' 2024-07-11 00:38:05,104 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-07-11 00:38:05,105 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:05,110 [ scc.git] DEBUG src/omero/plugins/admin.py | 4 +++- 2024-07-11 00:38:05,110 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 1 deletion(-) 2024-07-11 00:38:05,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:05,447 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 00:38:05,491 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:38:05,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:05,497 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 00:38:05,543 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 00:38:05,552 [ scc.git] DEBUG has no local changes 2024-07-11 00:38:05,552 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 415 barrettMCW 'Fix reconnection issue' (user: barrettMCW) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 416 sbesson 'Parse omero.logging properties under new Logging heading' - PR 417 chris-allan 'Switch result logging to DEBUG level' - PR 418 chris-allan 'Allow a caller to ignore row numbers' - PR 419 sbesson 'admin rewrite: make OMERO.tables module configurable' Generated by OMERO-python-superbuild-push#112 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/112/)' 2024-07-11 00:38:05,563 [ scc.git] DEBUG [detached HEAD 042f45f0] merge master -Dorg -Ssuccess-only 2024-07-11 00:38:05,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-11 00:38:05,564 [ scc.git] INFO Overriding base-branch from master to develop 2024-07-11 00:38:05,564 [ scc.repo] DEBUG ## PRs found: 2024-07-11 00:38:06,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-07-11 00:38:06,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-07-11 00:38:07,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-07-11 00:38:07,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-07-11 00:38:08,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-07-11 00:38:08,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-07-11 00:38:08,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-07-11 00:38:09,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-11 00:38:09,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:10,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-11 00:38:10,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-07-11 00:38:10,864 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-11 00:38:11,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-07-11 00:38:11,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-07-11 00:38:12,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-07-11 00:38:12,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-07-11 00:38:12,791 [ scc.repo] DEBUG ## Branches found: 2024-07-11 00:38:12,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-07-11 00:38:12,791 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:38:12,791 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:12,796 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-07-11 00:38:12,801 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 00:38:12,801 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-07-11 00:38:12,807 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-07-11 00:38:12,813 [ scc.git] DEBUG Already up to date. 2024-07-11 00:38:12,813 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-07-11 00:38:13,316 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-07-11 00:38:13,316 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-07-11 00:38:13,321 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 00:38:13,321 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:38:13,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:13,327 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-11 00:38:13,335 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:13,340 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-11 00:38:13,385 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-07-11 00:38:13,386 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-07-11 00:38:13,386 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-11 00:38:13,386 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-11 00:38:13,391 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-11 00:38:13,398 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-11 00:38:13,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:13,570 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-11 00:38:13,577 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-11 00:38:13,583 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#112](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/112/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/112/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-07-11 00:38:13,587 [ scc.config] DEBUG Found github.token 2024-07-11 00:38:13,587 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-07-11 00:38:13,587 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 00:38:13,627 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:38:13,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:13,632 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 00:38:13,679 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 00:38:13,685 [ scc.git] DEBUG has no local changes 2024-07-11 00:38:13,686 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#112 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/112/)' 2024-07-11 00:38:13,695 [ scc.git] DEBUG [detached HEAD 6b686f9] merge master -Dorg -Ssuccess-only 2024-07-11 00:38:13,696 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-11 00:38:13,696 [ scc.repo] DEBUG ## PRs found: 2024-07-11 00:38:14,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2024-07-11 00:38:14,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/564 HTTP/1.1" 200 None 2024-07-11 00:38:15,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/564/comments HTTP/1.1" 200 None 2024-07-11 00:38:15,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None 2024-07-11 00:38:16,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:16,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:38:16,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None 2024-07-11 00:38:17,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/091e5fc2d35212271ac71fd66b42c611299d6fde?per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:17,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None 2024-07-11 00:38:18,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/status HTTP/1.1" 200 None 2024-07-11 00:38:18,332 [ scc.repo] DEBUG - PR 564 knabar 'New table API endpoints for lower level table access' 2024-07-11 00:38:18,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/563 HTTP/1.1" 200 None 2024-07-11 00:38:19,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/563/comments HTTP/1.1" 200 None 2024-07-11 00:38:19,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None 2024-07-11 00:38:20,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:20,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:38:21,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None 2024-07-11 00:38:21,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/af88a0cd2aa7d15d9b0dca1ce369060284551de7?per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:22,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7 HTTP/1.1" 200 None 2024-07-11 00:38:22,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/af88a0cd2aa7d15d9b0dca1ce369060284551de7/status HTTP/1.1" 200 None 2024-07-11 00:38:22,600 [ scc.repo] DEBUG - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS' 2024-07-11 00:38:23,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/562 HTTP/1.1" 200 None 2024-07-11 00:38:23,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/560 HTTP/1.1" 200 None 2024-07-11 00:38:23,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/560/comments HTTP/1.1" 200 None 2024-07-11 00:38:24,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None 2024-07-11 00:38:25,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:25,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:38:25,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None 2024-07-11 00:38:26,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/f92a4e2764982ace46474a82af4ad25bee9d8823?per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:26,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823 HTTP/1.1" 200 None 2024-07-11 00:38:27,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f92a4e2764982ace46474a82af4ad25bee9d8823/status HTTP/1.1" 200 None 2024-07-11 00:38:27,278 [ scc.repo] DEBUG - PR 560 will-moore 'linkify supports urls that include $ character' 2024-07-11 00:38:27,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/558 HTTP/1.1" 200 None 2024-07-11 00:38:28,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None 2024-07-11 00:38:28,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:29,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:38:29,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None 2024-07-11 00:38:30,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/575f7bbc72aad997963937297f08156ca6f7dd5e?per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:30,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None 2024-07-11 00:38:30,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/status HTTP/1.1" 200 None 2024-07-11 00:38:30,963 [ scc.repo] DEBUG - PR 558 jburel 'Update readme' 2024-07-11 00:38:31,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555 HTTP/1.1" 200 None 2024-07-11 00:38:31,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555/comments HTTP/1.1" 200 None 2024-07-11 00:38:32,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None 2024-07-11 00:38:32,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:33,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:38:33,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None 2024-07-11 00:38:34,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/97e479b717e34179eceea2507d3e69a04b2fec1e?per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:34,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None 2024-07-11 00:38:35,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/status HTTP/1.1" 200 None 2024-07-11 00:38:35,212 [ scc.repo] DEBUG - PR 555 chris-allan 'Archive status' 2024-07-11 00:38:35,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None 2024-07-11 00:38:36,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554/comments HTTP/1.1" 200 None 2024-07-11 00:38:36,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5 HTTP/1.1" 200 None 2024-07-11 00:38:37,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:37,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:38:38,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5 HTTP/1.1" 200 None 2024-07-11 00:38:38,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/79c23056136bc929e4ebd57d24600780c92921c5?per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:38,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5 HTTP/1.1" 200 None 2024-07-11 00:38:39,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/79c23056136bc929e4ebd57d24600780c92921c5/status HTTP/1.1" 200 None 2024-07-11 00:38:39,371 [ scc.repo] DEBUG - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' 2024-07-11 00:38:39,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2024-07-11 00:38:40,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2024-07-11 00:38:40,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2024-07-11 00:38:41,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2024-07-11 00:38:41,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-07-11 00:38:42,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:42,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:38:43,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-07-11 00:38:43,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:44,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-07-11 00:38:44,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2024-07-11 00:38:44,554 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-07-11 00:38:45,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2024-07-11 00:38:45,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2024-07-11 00:38:46,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-07-11 00:38:46,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:46,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:38:47,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-07-11 00:38:47,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:48,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-07-11 00:38:48,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2024-07-11 00:38:48,695 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2024-07-11 00:38:49,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2024-07-11 00:38:49,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2024-07-11 00:38:50,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2024-07-11 00:38:50,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 00:38:51,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 00:38:51,161 [ scc.repo] DEBUG ## Branches found: 2024-07-11 00:38:51,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-07-11 00:38:51,162 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:38:51,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:51,167 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 00:38:51,172 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 00:38:51,172 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 00:38:51,196 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 00:38:51,203 [ scc.git] DEBUG Already up to date. 2024-07-11 00:38:51,203 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2024-07-11 00:38:51,865 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-11 00:38:51,866 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2024-07-11 00:38:51,871 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2024-07-11 00:38:52,343 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-11 00:38:52,344 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2024-07-11 00:38:52,349 [ scc.git] DEBUG Calling 'git fetch origin pull/554/head' 2024-07-11 00:38:53,236 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-11 00:38:53,236 [ scc.git] DEBUG * branch refs/pull/554/head -> FETCH_HEAD 2024-07-11 00:38:53,243 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-07-11 00:38:54,125 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-11 00:38:54,126 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-07-11 00:38:54,131 [ scc.git] DEBUG Calling 'git fetch origin pull/558/head' 2024-07-11 00:38:54,516 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-11 00:38:54,516 [ scc.git] DEBUG * branch refs/pull/558/head -> FETCH_HEAD 2024-07-11 00:38:54,522 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head' 2024-07-11 00:38:54,894 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-11 00:38:54,895 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD 2024-07-11 00:38:54,900 [ scc.git] DEBUG Calling 'git fetch origin pull/563/head' 2024-07-11 00:38:55,307 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-11 00:38:55,307 [ scc.git] DEBUG * branch refs/pull/563/head -> FETCH_HEAD 2024-07-11 00:38:55,312 [ scc.git] DEBUG Calling 'git fetch origin pull/564/head' 2024-07-11 00:38:55,646 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-07-11 00:38:55,647 [ scc.git] DEBUG * branch refs/pull/564/head -> FETCH_HEAD 2024-07-11 00:38:55,651 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 00:38:55,652 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:38:55,652 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:55,656 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-07-11 00:38:55,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:55,666 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-07-11 00:38:55,741 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-07-11 00:38:55,741 [ scc.git] DEBUG Auto-merging setup.py 2024-07-11 00:38:55,742 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:55,746 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2024-07-11 00:38:55,746 [ scc.git] DEBUG setup.py | 1 + 2024-07-11 00:38:55,746 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2024-07-11 00:38:55,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:55,918 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-07-11 00:38:55,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:55,930 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-07-11 00:38:56,031 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2024-07-11 00:38:56,031 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-07-11 00:38:56,033 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:56,038 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2024-07-11 00:38:56,038 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2024-07-11 00:38:56,038 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2024-07-11 00:38:56,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:56,324 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...79c23056136bc929e4ebd57d24600780c92921c5' 2024-07-11 00:38:56,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:56,337 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 554 (Optimize obj_id_bitmask by using its own query) 79c23056136bc929e4ebd57d24600780c92921c5' 2024-07-11 00:38:56,396 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:56,401 [ scc.git] DEBUG omeroweb/webgateway/views.py | 77 ++++++++++++++++++++++++++------------------ 2024-07-11 00:38:56,401 [ scc.git] DEBUG test/unit/test_webgateway.py | 9 ++++-- 2024-07-11 00:38:56,401 [ scc.git] DEBUG 2 files changed, 51 insertions(+), 35 deletions(-) 2024-07-11 00:38:56,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:56,728 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...97e479b717e34179eceea2507d3e69a04b2fec1e' 2024-07-11 00:38:56,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:56,739 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Archive status) 97e479b717e34179eceea2507d3e69a04b2fec1e' 2024-07-11 00:38:56,882 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-07-11 00:38:56,884 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:56,889 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.tree.js | 3 +++ 2024-07-11 00:38:56,889 [ scc.git] DEBUG .../webclient/annotations/includes/core_metadata.html | 6 ++++++ 2024-07-11 00:38:56,889 [ scc.git] DEBUG omeroweb/webclient/tree.py | 10 ++++++++-- 2024-07-11 00:38:56,889 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 1 + 2024-07-11 00:38:56,889 [ scc.git] DEBUG 4 files changed, 18 insertions(+), 2 deletions(-) 2024-07-11 00:38:57,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:57,142 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...575f7bbc72aad997963937297f08156ca6f7dd5e' 2024-07-11 00:38:57,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:57,154 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 558 (Update readme) 575f7bbc72aad997963937297f08156ca6f7dd5e' 2024-07-11 00:38:57,180 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:57,183 [ scc.git] DEBUG README.rst | 42 +++++++++++++++++++++--------------------- 2024-07-11 00:38:57,183 [ scc.git] DEBUG 1 file changed, 21 insertions(+), 21 deletions(-) 2024-07-11 00:38:57,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:57,555 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f92a4e2764982ace46474a82af4ad25bee9d8823' 2024-07-11 00:38:57,564 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:57,569 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (linkify supports urls that include $ character) f92a4e2764982ace46474a82af4ad25bee9d8823' 2024-07-11 00:38:57,620 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:57,624 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2024-07-11 00:38:57,624 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-07-11 00:38:57,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:57,967 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...af88a0cd2aa7d15d9b0dca1ce369060284551de7' 2024-07-11 00:38:57,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:57,980 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 563 (Batch by MAX_TABLE_DOWNLOAD_ROWS) af88a0cd2aa7d15d9b0dca1ce369060284551de7' 2024-07-11 00:38:58,050 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py 2024-07-11 00:38:58,052 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:58,057 [ scc.git] DEBUG omeroweb/webgateway/views.py | 2 +- 2024-07-11 00:38:58,057 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-07-11 00:38:58,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:58,383 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...091e5fc2d35212271ac71fd66b42c611299d6fde' 2024-07-11 00:38:58,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:58,395 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 564 (New table API endpoints for lower level table access) 091e5fc2d35212271ac71fd66b42c611299d6fde' 2024-07-11 00:38:58,464 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-07-11 00:38:58,464 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py 2024-07-11 00:38:58,465 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 00:38:58,471 [ scc.git] DEBUG omeroweb/settings.py | 7 ++ 2024-07-11 00:38:58,471 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 29 +++++++ 2024-07-11 00:38:58,471 [ scc.git] DEBUG omeroweb/webgateway/views.py | 175 ++++++++++++++++++++++++++++++++++++++++++- 2024-07-11 00:38:58,471 [ scc.git] DEBUG 3 files changed, 210 insertions(+), 1 deletion(-) 2024-07-11 00:38:58,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:58,798 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 00:38:58,839 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 00:38:58,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 00:38:58,844 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 00:38:58,886 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 00:38:58,896 [ scc.git] DEBUG has no local changes 2024-07-11 00:38:58,896 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' - PR 555 chris-allan 'Archive status' - PR 558 jburel 'Update readme' - PR 560 will-moore 'linkify supports urls that include $ character' - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS' - PR 564 knabar 'New table API endpoints for lower level table access' Generated by OMERO-python-superbuild-push#112 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/112/)' 2024-07-11 00:38:58,908 [ scc.git] DEBUG [detached HEAD 90cc43355] merge master -Dorg -Ssuccess-only 2024-07-11 00:38:58,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-11 00:38:58,909 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 00:38:58,963 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2024-07-11 00:38:59,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:59,226 [ scc.config] DEBUG Found submodule.omero-marshal.url 2024-07-11 00:38:59,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:38:59,639 [ scc.config] DEBUG Found submodule.omero-py.url 2024-07-11 00:39:00,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:39:00,044 [ scc.config] DEBUG Found submodule.omero-scripts.url 2024-07-11 00:39:00,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:39:00,451 [ scc.config] DEBUG Found submodule.omero-web.url 2024-07-11 00:39:00,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 00:39:00,871 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 00:39:00,904 [ scc.git] DEBUG has local changes 2024-07-11 00:39:00,904 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 415 barrettMCW 'Fix reconnection issue' (user: barrettMCW) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 416 sbesson 'Parse omero.logging properties under new Logging heading' - PR 417 chris-allan 'Switch result logging to DEBUG level' - PR 418 chris-allan 'Allow a caller to ignore row numbers' - PR 419 sbesson 'admin rewrite: make OMERO.tables module configurable' Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' - PR 555 chris-allan 'Archive status' - PR 558 jburel 'Update readme' - PR 560 will-moore 'linkify supports urls that include $ character' - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS' - PR 564 knabar 'New table API endpoints for lower level table access' Generated by OMERO-python-superbuild-push#112 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/112/)' 2024-07-11 00:39:00,914 [ scc.git] DEBUG [detached HEAD 3f6de1d] merge master -Dorg -Ssuccess-only 2024-07-11 00:39:00,915 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-07-11 00:39:00,915 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2024-07-11 00:39:00,915 [ scc.merge] INFO Already up to date. 2024-07-11 00:39:00,915 [ scc.merge] INFO 2024-07-11 00:39:00,915 [ scc.merge] INFO 2024-07-11 00:39:00,915 [ scc.merge] INFO Repository: ome/omero-dropbox 2024-07-11 00:39:00,915 [ scc.merge] INFO Already up to date. 2024-07-11 00:39:00,915 [ scc.merge] INFO 2024-07-11 00:39:00,915 [ scc.merge] INFO Merged PRs: 2024-07-11 00:39:00,915 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-07-11 00:39:00,915 [ scc.merge] INFO 2024-07-11 00:39:00,915 [ scc.merge] INFO Repository: ome/omero-marshal 2024-07-11 00:39:00,915 [ scc.merge] INFO Excluded PRs: 2024-07-11 00:39:00,915 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2024-07-11 00:39:00,915 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2024-07-11 00:39:00,915 [ scc.merge] INFO Already up to date. 2024-07-11 00:39:00,915 [ scc.merge] INFO 2024-07-11 00:39:00,915 [ scc.merge] INFO Merged PRs: 2024-07-11 00:39:00,915 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2024-07-11 00:39:00,915 [ scc.merge] INFO 2024-07-11 00:39:00,915 [ scc.merge] INFO Repository: ome/omero-py 2024-07-11 00:39:00,915 [ scc.merge] INFO Excluded PRs: 2024-07-11 00:39:00,915 [ scc.merge] INFO - PR 415 barrettMCW 'Fix reconnection issue' (user: barrettMCW) 2024-07-11 00:39:00,915 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2024-07-11 00:39:00,916 [ scc.merge] INFO Already up to date. 2024-07-11 00:39:00,916 [ scc.merge] INFO 2024-07-11 00:39:00,916 [ scc.merge] INFO Merged PRs: 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 416 sbesson 'Parse omero.logging properties under new Logging heading' 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 417 chris-allan 'Switch result logging to DEBUG level' 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 418 chris-allan 'Allow a caller to ignore row numbers' 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 419 sbesson 'admin rewrite: make OMERO.tables module configurable' 2024-07-11 00:39:00,916 [ scc.merge] INFO 2024-07-11 00:39:00,916 [ scc.merge] INFO Repository: ome/omero-scripts 2024-07-11 00:39:00,916 [ scc.merge] INFO Excluded PRs: 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-07-11 00:39:00,916 [ scc.merge] INFO Already up to date. 2024-07-11 00:39:00,916 [ scc.merge] INFO 2024-07-11 00:39:00,916 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-11 00:39:00,916 [ scc.merge] INFO 2024-07-11 00:39:00,916 [ scc.merge] INFO Repository: ome/omero-web 2024-07-11 00:39:00,916 [ scc.merge] INFO Excluded PRs: 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 562 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2024-07-11 00:39:00,916 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2024-07-11 00:39:00,917 [ scc.merge] INFO Already up to date. 2024-07-11 00:39:00,917 [ scc.merge] INFO 2024-07-11 00:39:00,917 [ scc.merge] INFO Merged PRs: 2024-07-11 00:39:00,917 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2024-07-11 00:39:00,917 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-07-11 00:39:00,917 [ scc.merge] INFO - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' 2024-07-11 00:39:00,917 [ scc.merge] INFO - PR 555 chris-allan 'Archive status' 2024-07-11 00:39:00,917 [ scc.merge] INFO - PR 558 jburel 'Update readme' 2024-07-11 00:39:00,917 [ scc.merge] INFO - PR 560 will-moore 'linkify supports urls that include $ character' 2024-07-11 00:39:00,917 [ scc.merge] INFO - PR 563 chris-allan 'Batch by MAX_TABLE_DOWNLOAD_ROWS' 2024-07-11 00:39:00,917 [ scc.merge] INFO - PR 564 knabar 'New table API endpoints for lower level table access' 2024-07-11 00:39:00,917 [ scc.merge] INFO 2024-07-11 00:39:00,917 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-11 00:39:00,917 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 00:39:00,922 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-07-11 00:39:00,922 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 00:39:00,928 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-11 00:39:00,928 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-07-11 00:39:00,928 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 00:39:00,933 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-11 00:39:00,933 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-07-11 00:39:00,933 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 00:39:00,938 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-11 00:39:00,938 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-07-11 00:39:00,938 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 00:39:00,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-07-11 00:39:00,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-07-11 00:39:00,942 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 00:39:00,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from a4307f4 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from cca4c2f nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 8d8108de nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from c20d273 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 5a2cd79d7 nothing to commit, working tree clean HEAD detached from 46d23a1 nothing to commit, working tree clean 2024-07-11 00:39:31,623 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS