Started by upstream project "Trigger" build number 177
originally caused by:
Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
Commit message: "Merge pull request #17 from jburel/python3"
> git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git
> git --version # timeout=10
> git --version # 'git version 2.39.3'
> git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 18cc8a4949001c5ff23dababa2232f564d7c74e6 (refs/remotes/origin/master)
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 18cc8a4949001c5ff23dababa2232f564d7c74e6 # timeout=10
Commit message: "Merge pull request #289 from ome/dependabot/submodules/omero-scripts-312afbe"
> git rev-list --no-walk 18cc8a4949001c5ff23dababa2232f564d7c74e6 # timeout=10
Cleaning workspace
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
> git submodule foreach --recursive git reset --hard # timeout=10
> git submodule foreach --recursive git clean -fdx # timeout=10
> git remote # timeout=10
> git submodule init # timeout=10
> git submodule sync # timeout=10
> git config --get remote.origin.url # timeout=10
> git submodule init # timeout=10
> git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
> git config --get submodule.omero-py.url # timeout=10
> git config -f .gitmodules --get submodule.omero-py.path # timeout=10
> git config --get submodule.omero-web.url # timeout=10
> git config -f .gitmodules --get submodule.omero-web.path # timeout=10
> git config --get submodule.omero-marshal.url # timeout=10
> git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10
> git config --get submodule.omero-dropbox.url # timeout=10
> git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10
> git config --get submodule.omero-scripts.url # timeout=10
> git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10
> git submodule update --init --recursive omero-py # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 155
[Pipeline] sh
> git submodule update --init --recursive omero-web # timeout=10
> git submodule update --init --recursive omero-marshal # timeout=10
> git submodule update --init --recursive omero-dropbox # timeout=10
> git submodule update --init --recursive omero-scripts # timeout=10
+ pushd build
~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-python-superbuild-push
+ python3 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ python3 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3)
Collecting pip
Using cached pip-24.2-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 21.2.3
Uninstalling pip-21.2.3:
Successfully uninstalled pip-21.2.3
Successfully installed pip-24.2
+ python3 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB)
Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
Collecting Deprecated (from PyGithub>=1.54->scc)
Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-43.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB)
Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc)
Using cached cffi-1.17.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2024.7.4-py3-none-any.whl.metadata (2.2 kB)
Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB)
Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc)
Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB)
Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB)
Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached requests-2.32.3-py3-none-any.whl (64 kB)
Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB)
Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB)
Using cached certifi-2024.7.4-py3-none-any.whl (162 kB)
Using cached cffi-1.17.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (444 kB)
Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB)
Using cached cryptography-43.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB)
Using cached idna-3.7-py3-none-any.whl (66 kB)
Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.2 certifi-2024.7.4 cffi-1.17.0 charset-normalizer-3.3.2 cryptography-43.0.0 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-08-18 00:31:29,160 [ scc.config] DEBUG Found github.token
2024-08-18 00:31:29,162 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-08-18 00:31:29,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:31:29,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:31:30,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-08-18 00:31:30,104 [ scc.gh] DEBUG 4298 remaining from 5000 (Reset at 00:08
2024-08-18 00:31:30,105 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-08-18 00:31:30,112 [ scc.git] DEBUG Check current status
2024-08-18 00:31:30,112 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-08-18 00:31:30,118 [ scc.git] DEBUG 18cc8a4 Merge pull request #289 from ome/dependabot/submodules/omero-scripts-312afbe
2024-08-18 00:31:30,119 [ scc.git] DEBUG Calling 'git submodule status'
2024-08-18 00:31:30,161 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-08-18 00:31:30,164 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-08-18 00:31:30,168 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-08-18 00:31:30,172 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-08-18 00:31:30,177 [ scc.git] DEBUG ba8c7e23c5d3343992812b7579e8d2cf30eb5374 omero-web (v5.26.0-28-gba8c7e23c)
2024-08-18 00:31:30,182 [ scc.config] DEBUG Found remote.origin.url
2024-08-18 00:31:30,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-08-18 00:31:31,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-08-18 00:31:31,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-08-18 00:31:31,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-08-18 00:31:32,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-08-18 00:31:32,209 [ scc.git] DEBUG Resetting...
2024-08-18 00:31:32,210 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-08-18 00:31:32,218 [ scc.git] DEBUG HEAD is now at 18cc8a4 Merge pull request #289 from ome/dependabot/submodules/omero-scripts-312afbe
2024-08-18 00:31:32,219 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-08-18 00:31:32,269 [ scc.git] DEBUG Check current status
2024-08-18 00:31:32,269 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-08-18 00:31:32,273 [ scc.git] DEBUG 18cc8a4 Merge pull request #289 from ome/dependabot/submodules/omero-scripts-312afbe
2024-08-18 00:31:32,273 [ scc.git] DEBUG Calling 'git submodule status'
2024-08-18 00:31:32,310 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-08-18 00:31:32,312 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-08-18 00:31:32,315 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-08-18 00:31:32,319 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-08-18 00:31:32,324 [ scc.git] DEBUG ba8c7e23c5d3343992812b7579e8d2cf30eb5374 omero-web (v5.26.0-28-gba8c7e23c)
2024-08-18 00:31:32,325 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-08-18 00:31:32,325 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-08-18 00:31:32,325 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-08-18 00:31:32,325 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-08-18 00:31:32,325 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-08-18 00:31:32,325 [ scc.repo] DEBUG ## PRs found:
2024-08-18 00:31:32,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-08-18 00:31:33,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/290 HTTP/1.1" 200 None
2024-08-18 00:31:33,126 [ scc.repo] DEBUG # ... Include label: dependencies
2024-08-18 00:31:33,126 [ scc.repo] DEBUG - PR 290 dependabot[bot] 'Bump omero-web from `ba8c7e2` to `7cd445c`'
2024-08-18 00:31:33,126 [ scc.repo] DEBUG ## Branches found:
2024-08-18 00:31:33,126 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:31:33,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:31:33,131 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-08-18 00:31:33,135 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-08-18 00:31:33,135 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-08-18 00:31:33,139 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-08-18 00:31:33,143 [ scc.git] DEBUG Already up to date.
2024-08-18 00:31:33,143 [ scc.git] DEBUG Calling 'git fetch origin pull/290/head'
2024-08-18 00:31:33,422 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-08-18 00:31:33,422 [ scc.git] DEBUG * branch refs/pull/290/head -> FETCH_HEAD
2024-08-18 00:31:33,434 [ scc.git] DEBUG ## Unique users: []
2024-08-18 00:31:33,434 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:31:33,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:31:33,438 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...43005729b7a6c8fd86894b00183ee7806d5fec7e'
2024-08-18 00:31:33,457 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:31:33,461 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 290 (Bump omero-web from `ba8c7e2` to `7cd445c`) 43005729b7a6c8fd86894b00183ee7806d5fec7e'
2024-08-18 00:31:33,470 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-08-18 00:31:33,472 [ scc.git] DEBUG omero-web | 2 +-
2024-08-18 00:31:33,472 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-08-18 00:31:33,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:31:33,609 [ scc.git] DEBUG Calling 'git submodule update'
2024-08-18 00:31:33,667 [ scc.git] DEBUG Submodule path 'omero-web': checked out '7cd445ce3cc018efb4327eac5fc74701cffdc578'
2024-08-18 00:31:33,668 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:31:33,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:31:33,672 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-08-18 00:31:33,722 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe0157f3310> has no local changes
2024-08-18 00:31:33,722 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 290 dependabot[bot] 'Bump omero-web from `ba8c7e2` to `7cd445c`'
Generated by OMERO-python-superbuild-push#148 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/148/)'
2024-08-18 00:31:33,774 [ scc.git] DEBUG [detached HEAD f3ab01b] merge master -Dorg -Snone
2024-08-18 00:31:33,774 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-08-18 00:31:33,774 [ scc.merge] INFO Already up to date.
2024-08-18 00:31:33,774 [ scc.merge] INFO
2024-08-18 00:31:33,774 [ scc.merge] INFO Merged PRs:
2024-08-18 00:31:33,774 [ scc.merge] INFO - PR 290 dependabot[bot] 'Bump omero-web from `ba8c7e2` to `7cd445c`'
2024-08-18 00:31:33,775 [ scc.merge] INFO
2024-08-18 00:31:33,775 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-08-18 00:31:33,775 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-08-18 00:31:35,887 [ scc.config] DEBUG Found github.token
2024-08-18 00:31:35,890 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-08-18 00:31:36,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:31:36,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:31:36,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-08-18 00:31:36,828 [ scc.gh] DEBUG 4288 remaining from 5000 (Reset at 00:08
2024-08-18 00:31:36,829 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-08-18 00:31:36,833 [ scc.git] DEBUG Check current status
2024-08-18 00:31:36,833 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-08-18 00:31:36,837 [ scc.git] DEBUG f3ab01b merge master -Dorg -Snone
2024-08-18 00:31:36,837 [ scc.git] DEBUG Calling 'git submodule status'
2024-08-18 00:31:36,879 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-08-18 00:31:36,882 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-08-18 00:31:36,886 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-08-18 00:31:36,890 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-08-18 00:31:36,893 [ scc.git] DEBUG 7cd445ce3cc018efb4327eac5fc74701cffdc578 omero-web (v5.27.0-1-g7cd445ce3)
2024-08-18 00:31:36,897 [ scc.config] DEBUG Found remote.origin.url
2024-08-18 00:31:36,897 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-08-18 00:31:36,899 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-08-18 00:31:37,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-08-18 00:31:37,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-08-18 00:31:38,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-08-18 00:31:38,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-08-18 00:31:38,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-08-18 00:31:38,949 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-08-18 00:31:39,000 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-08-18 00:31:39,001 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-08-18 00:31:39,005 [ scc.git] DEBUG Check current status
2024-08-18 00:31:39,005 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-08-18 00:31:39,010 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-08-18 00:31:39,010 [ scc.git] DEBUG Calling 'git submodule status'
2024-08-18 00:31:39,056 [ scc.config] DEBUG Found remote.origin.url
2024-08-18 00:31:39,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-08-18 00:31:39,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-08-18 00:31:40,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-08-18 00:31:40,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-08-18 00:31:41,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-08-18 00:31:41,096 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-08-18 00:31:41,136 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-08-18 00:31:41,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-08-18 00:31:41,137 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-08-18 00:31:41,141 [ scc.git] DEBUG Check current status
2024-08-18 00:31:41,142 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-08-18 00:31:41,145 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-08-18 00:31:41,146 [ scc.git] DEBUG Calling 'git submodule status'
2024-08-18 00:31:41,186 [ scc.config] DEBUG Found remote.origin.url
2024-08-18 00:31:41,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-08-18 00:31:41,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-08-18 00:31:42,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-08-18 00:31:42,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-08-18 00:31:43,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-08-18 00:31:43,210 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-08-18 00:31:43,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-08-18 00:31:43,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-08-18 00:31:43,250 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-08-18 00:31:43,254 [ scc.git] DEBUG Check current status
2024-08-18 00:31:43,254 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-08-18 00:31:43,265 [ scc.git] DEBUG 749a68ac Bump version: 5.19.4 → 5.19.5.dev0
2024-08-18 00:31:43,265 [ scc.git] DEBUG Calling 'git submodule status'
2024-08-18 00:31:43,306 [ scc.config] DEBUG Found remote.origin.url
2024-08-18 00:31:43,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-08-18 00:31:44,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-08-18 00:31:44,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-08-18 00:31:44,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-08-18 00:31:45,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-08-18 00:31:45,386 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-08-18 00:31:45,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-08-18 00:31:45,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-08-18 00:31:45,426 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-08-18 00:31:45,430 [ scc.git] DEBUG Check current status
2024-08-18 00:31:45,430 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-08-18 00:31:45,444 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-08-18 00:31:45,445 [ scc.git] DEBUG Calling 'git submodule status'
2024-08-18 00:31:45,484 [ scc.config] DEBUG Found remote.origin.url
2024-08-18 00:31:45,484 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-08-18 00:31:45,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-08-18 00:31:46,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-08-18 00:31:46,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-08-18 00:31:47,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-08-18 00:31:47,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-08-18 00:31:47,540 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-08-18 00:31:47,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-08-18 00:31:47,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-08-18 00:31:47,581 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-08-18 00:31:47,586 [ scc.git] DEBUG Check current status
2024-08-18 00:31:47,586 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-08-18 00:31:47,590 [ scc.git] DEBUG 7cd445ce3 Bump version: 5.27.0 → 5.27.1.dev0
2024-08-18 00:31:47,591 [ scc.git] DEBUG Calling 'git submodule status'
2024-08-18 00:31:47,629 [ scc.config] DEBUG Found remote.origin.url
2024-08-18 00:31:47,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-08-18 00:31:48,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-08-18 00:31:48,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-08-18 00:31:49,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-08-18 00:31:49,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-08-18 00:31:49,669 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-08-18 00:31:49,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-08-18 00:31:49,714 [ scc.git] DEBUG Resetting...
2024-08-18 00:31:49,714 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-08-18 00:31:49,720 [ scc.git] DEBUG HEAD is now at f3ab01b merge master -Dorg -Snone
2024-08-18 00:31:49,720 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-08-18 00:31:49,775 [ scc.git] DEBUG Check current status
2024-08-18 00:31:49,776 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-08-18 00:31:49,780 [ scc.git] DEBUG f3ab01b merge master -Dorg -Snone
2024-08-18 00:31:49,780 [ scc.git] DEBUG Calling 'git submodule status'
2024-08-18 00:31:49,822 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-08-18 00:31:49,825 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-08-18 00:31:49,828 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-08-18 00:31:49,833 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-08-18 00:31:49,837 [ scc.git] DEBUG 7cd445ce3cc018efb4327eac5fc74701cffdc578 omero-web (v5.27.0-1-g7cd445ce3)
2024-08-18 00:31:49,838 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-08-18 00:31:49,838 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-08-18 00:31:49,838 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-08-18 00:31:49,838 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-08-18 00:31:49,838 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-08-18 00:31:49,838 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-08-18 00:31:49,838 [ scc.repo] DEBUG ## PRs found:
2024-08-18 00:31:50,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-08-18 00:31:50,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/290 HTTP/1.1" 200 None
2024-08-18 00:31:50,854 [ scc.repo] DEBUG # ... Include label: dependencies
2024-08-18 00:31:51,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/43005729b7a6c8fd86894b00183ee7806d5fec7e HTTP/1.1" 200 None
2024-08-18 00:31:51,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/43005729b7a6c8fd86894b00183ee7806d5fec7e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:31:52,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/43005729b7a6c8fd86894b00183ee7806d5fec7e HTTP/1.1" 200 None
2024-08-18 00:31:52,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/43005729b7a6c8fd86894b00183ee7806d5fec7e?per_page=1 HTTP/1.1" 200 2
2024-08-18 00:31:52,766 [ scc.repo] DEBUG - PR 290 dependabot[bot] 'Bump omero-web from `ba8c7e2` to `7cd445c`'
2024-08-18 00:31:52,766 [ scc.repo] DEBUG ## Branches found:
2024-08-18 00:31:52,766 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:31:52,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:31:52,771 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-08-18 00:31:52,775 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-08-18 00:31:52,776 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-08-18 00:31:52,781 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-08-18 00:31:52,787 [ scc.git] DEBUG Already up to date.
2024-08-18 00:31:52,787 [ scc.git] DEBUG Calling 'git fetch origin pull/290/head'
2024-08-18 00:31:53,081 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-08-18 00:31:53,082 [ scc.git] DEBUG * branch refs/pull/290/head -> FETCH_HEAD
2024-08-18 00:31:53,086 [ scc.git] DEBUG ## Unique users: []
2024-08-18 00:31:53,086 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:31:53,086 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:31:53,090 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...43005729b7a6c8fd86894b00183ee7806d5fec7e'
2024-08-18 00:31:53,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:31:53,097 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 290 (Bump omero-web from `ba8c7e2` to `7cd445c`) 43005729b7a6c8fd86894b00183ee7806d5fec7e'
2024-08-18 00:31:53,101 [ scc.git] DEBUG Already up to date.
2024-08-18 00:31:53,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:31:53,272 [ scc.git] DEBUG Calling 'git submodule update'
2024-08-18 00:31:53,311 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:31:53,312 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:31:53,316 [ scc.repo] DEBUG ## PRs found:
2024-08-18 00:31:53,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-08-18 00:31:54,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-08-18 00:31:54,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-08-18 00:31:55,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-08-18 00:31:55,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:31:56,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-08-18 00:31:56,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-08-18 00:31:56,462 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-08-18 00:31:56,463 [ scc.repo] DEBUG ## Branches found:
2024-08-18 00:31:56,463 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-08-18 00:31:56,463 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:31:56,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:31:56,469 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-08-18 00:31:56,472 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-08-18 00:31:56,473 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-08-18 00:31:56,477 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-08-18 00:31:56,481 [ scc.git] DEBUG Already up to date.
2024-08-18 00:31:56,481 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-08-18 00:31:56,841 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-08-18 00:31:56,841 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-08-18 00:31:56,845 [ scc.git] DEBUG ## Unique users: []
2024-08-18 00:31:56,846 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:31:56,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:31:56,851 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-08-18 00:31:56,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:31:56,864 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-08-18 00:31:57,012 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-08-18 00:31:57,012 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-08-18 00:31:57,012 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-08-18 00:31:57,012 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-08-18 00:31:57,013 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-08-18 00:31:57,013 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-08-18 00:31:57,013 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-08-18 00:31:57,013 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-08-18 00:31:57,013 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-08-18 00:31:57,013 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-08-18 00:31:57,017 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-08-18 00:31:57,017 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-08-18 00:31:57,018 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-08-18 00:31:57,018 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-08-18 00:31:57,018 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-08-18 00:31:57,018 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-08-18 00:31:57,018 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-08-18 00:31:57,018 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-08-18 00:31:57,018 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-08-18 00:31:57,018 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-08-18 00:31:57,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:31:57,155 [ scc.git] DEBUG Calling 'git submodule update'
2024-08-18 00:31:57,199 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:31:57,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:31:57,203 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-08-18 00:31:57,245 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-08-18 00:31:57,251 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5819521fa0> has no local changes
2024-08-18 00:31:57,252 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#148 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/148/)'
2024-08-18 00:31:57,261 [ scc.git] DEBUG [detached HEAD 3c82046] merge master -Dorg -Ssuccess-only
2024-08-18 00:31:57,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-08-18 00:31:57,262 [ scc.repo] DEBUG ## PRs found:
2024-08-18 00:31:57,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-08-18 00:31:58,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-08-18 00:31:58,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-08-18 00:31:59,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-08-18 00:31:59,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:31:59,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-08-18 00:32:00,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-08-18 00:32:00,315 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-08-18 00:32:00,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-08-18 00:32:01,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-08-18 00:32:01,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-08-18 00:32:02,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-08-18 00:32:02,159 [ scc.repo] DEBUG ## Branches found:
2024-08-18 00:32:02,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-08-18 00:32:02,159 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:32:02,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:02,164 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-08-18 00:32:02,167 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-08-18 00:32:02,167 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-08-18 00:32:02,172 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-08-18 00:32:02,176 [ scc.git] DEBUG Already up to date.
2024-08-18 00:32:02,176 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-08-18 00:32:02,567 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-08-18 00:32:02,567 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-08-18 00:32:02,572 [ scc.git] DEBUG ## Unique users: []
2024-08-18 00:32:02,572 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:32:02,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:02,578 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-08-18 00:32:02,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:02,588 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-08-18 00:32:02,599 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-08-18 00:32:02,600 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-08-18 00:32:02,603 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-08-18 00:32:02,603 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-08-18 00:32:02,603 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-08-18 00:32:02,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:32:02,739 [ scc.git] DEBUG Calling 'git submodule update'
2024-08-18 00:32:02,783 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:32:02,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:02,788 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-08-18 00:32:02,825 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-08-18 00:32:02,833 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f581847a490> has no local changes
2024-08-18 00:32:02,833 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#148 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/148/)'
2024-08-18 00:32:02,842 [ scc.git] DEBUG [detached HEAD 1deaade] merge master -Dorg -Ssuccess-only
2024-08-18 00:32:02,842 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-08-18 00:32:02,843 [ scc.repo] DEBUG ## PRs found:
2024-08-18 00:32:03,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-08-18 00:32:03,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/424 HTTP/1.1" 200 None
2024-08-18 00:32:04,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/424/comments HTTP/1.1" 200 None
2024-08-18 00:32:04,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec HTTP/1.1" 200 None
2024-08-18 00:32:05,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:05,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-08-18 00:32:06,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec HTTP/1.1" 200 None
2024-08-18 00:32:06,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec?per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:07,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec HTTP/1.1" 200 None
2024-08-18 00:32:07,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec/status HTTP/1.1" 200 None
2024-08-18 00:32:07,566 [ scc.repo] DEBUG - PR 424 DavidStirling 'Prevent hang on exit while omero.client keepalive is active'
2024-08-18 00:32:08,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-08-18 00:32:08,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-08-18 00:32:09,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-08-18 00:32:09,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:09,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-08-18 00:32:10,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-08-18 00:32:10,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:11,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-08-18 00:32:11,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-08-18 00:32:11,762 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-08-18 00:32:12,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-08-18 00:32:12,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-08-18 00:32:13,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-08-18 00:32:13,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:14,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-08-18 00:32:14,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-08-18 00:32:15,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-08-18 00:32:15,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:16,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-08-18 00:32:16,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-08-18 00:32:16,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:17,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-08-18 00:32:17,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-08-18 00:32:17,795 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-08-18 00:32:18,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-08-18 00:32:18,236 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-08-18 00:32:18,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-08-18 00:32:19,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-08-18 00:32:19,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-08-18 00:32:20,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:20,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-08-18 00:32:20,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-08-18 00:32:20,977 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-08-18 00:32:21,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-08-18 00:32:21,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-08-18 00:32:22,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-08-18 00:32:22,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:23,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-08-18 00:32:23,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-08-18 00:32:24,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:24,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-08-18 00:32:25,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-08-18 00:32:25,027 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-08-18 00:32:25,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-08-18 00:32:26,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-08-18 00:32:26,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-08-18 00:32:26,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-08-18 00:32:27,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-08-18 00:32:27,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:28,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-08-18 00:32:28,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-08-18 00:32:28,771 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-08-18 00:32:29,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-08-18 00:32:29,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-08-18 00:32:30,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:30,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-08-18 00:32:31,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-08-18 00:32:31,079 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-08-18 00:32:31,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-08-18 00:32:32,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-08-18 00:32:32,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-08-18 00:32:32,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:33,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-08-18 00:32:33,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-08-18 00:32:33,815 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-08-18 00:32:34,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-08-18 00:32:34,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-08-18 00:32:35,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-08-18 00:32:35,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:36,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-08-18 00:32:36,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-08-18 00:32:36,439 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-08-18 00:32:36,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-08-18 00:32:37,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-08-18 00:32:37,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-08-18 00:32:38,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-08-18 00:32:38,224 [ scc.repo] DEBUG ## Branches found:
2024-08-18 00:32:38,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-08-18 00:32:38,225 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:32:38,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:38,231 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-08-18 00:32:38,239 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-08-18 00:32:38,239 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-08-18 00:32:38,246 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-08-18 00:32:38,255 [ scc.git] DEBUG Already up to date.
2024-08-18 00:32:38,255 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-08-18 00:32:38,627 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-08-18 00:32:38,627 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-08-18 00:32:38,634 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-08-18 00:32:38,984 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-08-18 00:32:38,984 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-08-18 00:32:38,990 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-08-18 00:32:39,322 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-08-18 00:32:39,322 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-08-18 00:32:39,328 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-08-18 00:32:39,640 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-08-18 00:32:39,641 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-08-18 00:32:39,646 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-08-18 00:32:39,973 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-08-18 00:32:39,974 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-08-18 00:32:39,981 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-08-18 00:32:40,270 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-08-18 00:32:40,270 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-08-18 00:32:40,277 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-08-18 00:32:40,572 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-08-18 00:32:40,573 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-08-18 00:32:40,581 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-08-18 00:32:40,940 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-08-18 00:32:40,940 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-08-18 00:32:40,947 [ scc.git] DEBUG Calling 'git fetch origin pull/424/head'
2024-08-18 00:32:41,316 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-08-18 00:32:41,316 [ scc.git] DEBUG * branch refs/pull/424/head -> FETCH_HEAD
2024-08-18 00:32:41,324 [ scc.git] DEBUG ## Unique users: []
2024-08-18 00:32:41,325 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:32:41,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:41,331 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-08-18 00:32:41,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:41,355 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-08-18 00:32:41,454 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-08-18 00:32:41,454 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-08-18 00:32:41,455 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-08-18 00:32:41,461 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-08-18 00:32:41,461 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-08-18 00:32:41,461 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-08-18 00:32:41,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:32:41,590 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-08-18 00:32:41,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:41,611 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-08-18 00:32:41,672 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-08-18 00:32:41,672 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-08-18 00:32:41,692 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-08-18 00:32:41,702 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-08-18 00:32:41,702 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-08-18 00:32:41,702 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-08-18 00:32:41,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:32:41,979 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-08-18 00:32:41,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:42,000 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-08-18 00:32:42,079 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-08-18 00:32:42,097 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-08-18 00:32:42,101 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-08-18 00:32:42,101 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-08-18 00:32:42,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:32:42,361 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-08-18 00:32:42,374 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:42,380 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-08-18 00:32:42,404 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-08-18 00:32:42,404 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-08-18 00:32:42,420 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-08-18 00:32:42,424 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-08-18 00:32:42,424 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-08-18 00:32:42,424 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-08-18 00:32:42,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:32:42,743 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-08-18 00:32:42,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:42,761 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-08-18 00:32:42,790 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-08-18 00:32:42,793 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-08-18 00:32:42,793 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-08-18 00:32:42,794 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-08-18 00:32:42,794 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-08-18 00:32:42,794 [ scc.git] DEBUG create mode 100644 connect.py
2024-08-18 00:32:43,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:32:43,131 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-08-18 00:32:43,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:43,154 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-08-18 00:32:43,239 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-08-18 00:32:43,257 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-08-18 00:32:43,260 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-08-18 00:32:43,260 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-08-18 00:32:43,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:32:43,509 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-08-18 00:32:43,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:43,528 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-08-18 00:32:43,613 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-08-18 00:32:43,615 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-08-18 00:32:43,620 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-08-18 00:32:43,620 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-08-18 00:32:43,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:32:43,895 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-08-18 00:32:43,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:43,917 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-08-18 00:32:44,031 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-08-18 00:32:44,032 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-08-18 00:32:44,040 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-08-18 00:32:44,040 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-08-18 00:32:44,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:32:44,283 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec'
2024-08-18 00:32:44,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:44,301 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 424 (Prevent hang on exit while omero.client keepalive is active) 0f8fe1cf7fd80f6bdaa7788a5f0b15dcb6d542ec'
2024-08-18 00:32:44,333 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-08-18 00:32:44,337 [ scc.git] DEBUG src/omero/util/__init__.py | 8 +-------
2024-08-18 00:32:44,337 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 7 deletions(-)
2024-08-18 00:32:44,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:32:44,671 [ scc.git] DEBUG Calling 'git submodule update'
2024-08-18 00:32:44,713 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:32:44,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:44,719 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-08-18 00:32:44,765 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-08-18 00:32:44,775 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f58184a5f40> has no local changes
2024-08-18 00:32:44,775 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 424 DavidStirling 'Prevent hang on exit while omero.client keepalive is active'
Generated by OMERO-python-superbuild-push#148 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/148/)'
2024-08-18 00:32:44,795 [ scc.git] DEBUG [detached HEAD 526a29cf] merge master -Dorg -Ssuccess-only
2024-08-18 00:32:44,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-08-18 00:32:44,796 [ scc.git] INFO Overriding base-branch from master to develop
2024-08-18 00:32:44,796 [ scc.repo] DEBUG ## PRs found:
2024-08-18 00:32:45,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-08-18 00:32:45,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-08-18 00:32:46,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-08-18 00:32:46,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-08-18 00:32:47,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-08-18 00:32:47,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-08-18 00:32:48,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-08-18 00:32:48,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-08-18 00:32:49,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:49,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-08-18 00:32:49,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-08-18 00:32:49,970 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-08-18 00:32:50,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-08-18 00:32:50,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-08-18 00:32:51,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-08-18 00:32:51,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-08-18 00:32:51,834 [ scc.repo] DEBUG ## Branches found:
2024-08-18 00:32:51,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-08-18 00:32:51,834 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:32:51,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:51,840 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-08-18 00:32:51,845 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-08-18 00:32:51,845 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-08-18 00:32:51,852 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-08-18 00:32:51,859 [ scc.git] DEBUG Already up to date.
2024-08-18 00:32:51,859 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-08-18 00:32:52,290 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-08-18 00:32:52,290 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-08-18 00:32:52,296 [ scc.git] DEBUG ## Unique users: []
2024-08-18 00:32:52,296 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:32:52,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:52,301 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-08-18 00:32:52,309 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:52,315 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-08-18 00:32:52,363 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-08-18 00:32:52,364 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-08-18 00:32:52,364 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-08-18 00:32:52,364 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-08-18 00:32:52,370 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-08-18 00:32:52,377 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-08-18 00:32:52,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:32:52,509 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-08-18 00:32:52,517 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-08-18 00:32:52,524 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#148](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/148/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/148/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-08-18 00:32:52,529 [ scc.config] DEBUG Found github.token
2024-08-18 00:32:52,530 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-08-18 00:32:52,530 [ scc.git] DEBUG Calling 'git submodule update'
2024-08-18 00:32:52,575 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:32:52,576 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:32:52,582 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-08-18 00:32:52,629 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-08-18 00:32:52,636 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f581848a640> has no local changes
2024-08-18 00:32:52,636 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#148 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/148/)'
2024-08-18 00:32:52,645 [ scc.git] DEBUG [detached HEAD 41f3b65] merge master -Dorg -Ssuccess-only
2024-08-18 00:32:52,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-08-18 00:32:52,646 [ scc.repo] DEBUG ## PRs found:
2024-08-18 00:32:53,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-08-18 00:32:53,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/571 HTTP/1.1" 200 None
2024-08-18 00:32:54,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-08-18 00:32:54,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-08-18 00:32:55,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-08-18 00:32:55,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-08-18 00:32:55,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-08-18 00:32:56,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-08-18 00:32:56,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-08-18 00:32:57,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:57,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-08-18 00:32:58,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-08-18 00:32:58,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-08-18 00:32:59,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-08-18 00:32:59,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-08-18 00:32:59,499 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-08-18 00:33:00,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-08-18 00:33:00,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-08-18 00:33:00,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-08-18 00:33:01,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:33:01,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-08-18 00:33:02,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-08-18 00:33:02,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-08-18 00:33:03,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-08-18 00:33:03,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-08-18 00:33:03,609 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-08-18 00:33:04,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-08-18 00:33:04,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-08-18 00:33:05,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-08-18 00:33:05,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-08-18 00:33:05,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-08-18 00:33:05,932 [ scc.repo] DEBUG ## Branches found:
2024-08-18 00:33:05,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-08-18 00:33:05,932 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:33:05,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:33:05,938 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-08-18 00:33:05,944 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-08-18 00:33:05,945 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-08-18 00:33:05,955 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-08-18 00:33:05,962 [ scc.git] DEBUG Already up to date.
2024-08-18 00:33:05,962 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-08-18 00:33:06,404 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-08-18 00:33:06,404 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-08-18 00:33:06,410 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-08-18 00:33:06,716 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-08-18 00:33:06,716 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-08-18 00:33:06,722 [ scc.git] DEBUG ## Unique users: []
2024-08-18 00:33:06,722 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:33:06,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:33:06,729 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-08-18 00:33:06,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:33:06,745 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-08-18 00:33:06,817 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-08-18 00:33:06,817 [ scc.git] DEBUG Auto-merging setup.py
2024-08-18 00:33:06,821 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-08-18 00:33:06,825 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-08-18 00:33:06,825 [ scc.git] DEBUG setup.py | 1 +
2024-08-18 00:33:06,825 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-08-18 00:33:06,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:33:06,968 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-08-18 00:33:06,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:33:06,985 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-08-18 00:33:07,031 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-08-18 00:33:07,031 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-08-18 00:33:07,045 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-08-18 00:33:07,050 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-08-18 00:33:07,050 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-08-18 00:33:07,050 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-08-18 00:33:07,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:33:07,363 [ scc.git] DEBUG Calling 'git submodule update'
2024-08-18 00:33:07,413 [ scc.git] DEBUG Get sha1 of %s
2024-08-18 00:33:07,414 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-08-18 00:33:07,420 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-08-18 00:33:07,466 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-08-18 00:33:07,479 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f581841c550> has no local changes
2024-08-18 00:33:07,479 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 571 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Generated by OMERO-python-superbuild-push#148 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/148/)'
2024-08-18 00:33:07,500 [ scc.git] DEBUG [detached HEAD 33b6a2c31] merge master -Dorg -Ssuccess-only
2024-08-18 00:33:07,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-08-18 00:33:07,501 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-08-18 00:33:07,559 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-08-18 00:33:07,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:33:07,769 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-08-18 00:33:08,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:33:08,155 [ scc.config] DEBUG Found submodule.omero-py.url
2024-08-18 00:33:08,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:33:08,535 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-08-18 00:33:08,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:33:08,931 [ scc.config] DEBUG Found submodule.omero-web.url
2024-08-18 00:33:09,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-08-18 00:33:09,314 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-08-18 00:33:09,350 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5819594310> has local changes
2024-08-18 00:33:09,350 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 290 dependabot[bot] 'Bump omero-web from `ba8c7e2` to `7cd445c`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 424 DavidStirling 'Prevent hang on exit while omero.client keepalive is active'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 571 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Generated by OMERO-python-superbuild-push#148 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/148/)'
2024-08-18 00:33:09,361 [ scc.git] DEBUG [detached HEAD 8c1a8bf] merge master -Dorg -Ssuccess-only
2024-08-18 00:33:09,361 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-08-18 00:33:09,361 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-08-18 00:33:09,361 [ scc.merge] INFO Already up to date.
2024-08-18 00:33:09,361 [ scc.merge] INFO
2024-08-18 00:33:09,362 [ scc.merge] INFO Merged PRs:
2024-08-18 00:33:09,362 [ scc.merge] INFO - PR 290 dependabot[bot] 'Bump omero-web from `ba8c7e2` to `7cd445c`'
2024-08-18 00:33:09,362 [ scc.merge] INFO
2024-08-18 00:33:09,362 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-08-18 00:33:09,362 [ scc.merge] INFO Already up to date.
2024-08-18 00:33:09,362 [ scc.merge] INFO
2024-08-18 00:33:09,362 [ scc.merge] INFO Merged PRs:
2024-08-18 00:33:09,362 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-08-18 00:33:09,362 [ scc.merge] INFO
2024-08-18 00:33:09,362 [ scc.merge] INFO Repository: ome/omero-marshal
2024-08-18 00:33:09,362 [ scc.merge] INFO Excluded PRs:
2024-08-18 00:33:09,362 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-08-18 00:33:09,362 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-08-18 00:33:09,362 [ scc.merge] INFO Already up to date.
2024-08-18 00:33:09,362 [ scc.merge] INFO
2024-08-18 00:33:09,362 [ scc.merge] INFO Merged PRs:
2024-08-18 00:33:09,362 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-08-18 00:33:09,362 [ scc.merge] INFO
2024-08-18 00:33:09,362 [ scc.merge] INFO Repository: ome/omero-py
2024-08-18 00:33:09,362 [ scc.merge] INFO Excluded PRs:
2024-08-18 00:33:09,362 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-08-18 00:33:09,362 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-08-18 00:33:09,362 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-08-18 00:33:09,362 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-08-18 00:33:09,362 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-08-18 00:33:09,362 [ scc.merge] INFO Already up to date.
2024-08-18 00:33:09,362 [ scc.merge] INFO
2024-08-18 00:33:09,362 [ scc.merge] INFO Merged PRs:
2024-08-18 00:33:09,362 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-08-18 00:33:09,362 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-08-18 00:33:09,362 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-08-18 00:33:09,362 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-08-18 00:33:09,362 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-08-18 00:33:09,363 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-08-18 00:33:09,363 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-08-18 00:33:09,363 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-08-18 00:33:09,363 [ scc.merge] INFO - PR 424 DavidStirling 'Prevent hang on exit while omero.client keepalive is active'
2024-08-18 00:33:09,363 [ scc.merge] INFO
2024-08-18 00:33:09,363 [ scc.merge] INFO Repository: ome/omero-scripts
2024-08-18 00:33:09,363 [ scc.merge] INFO Excluded PRs:
2024-08-18 00:33:09,363 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-08-18 00:33:09,363 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-08-18 00:33:09,363 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-08-18 00:33:09,363 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-08-18 00:33:09,363 [ scc.merge] INFO Already up to date.
2024-08-18 00:33:09,363 [ scc.merge] INFO
2024-08-18 00:33:09,363 [ scc.merge] INFO Conflicting PRs (not included):
2024-08-18 00:33:09,363 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-08-18 00:33:09,363 [ scc.merge] INFO
2024-08-18 00:33:09,363 [ scc.merge] INFO Repository: ome/omero-web
2024-08-18 00:33:09,363 [ scc.merge] INFO Excluded PRs:
2024-08-18 00:33:09,363 [ scc.merge] INFO - PR 571 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-08-18 00:33:09,363 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-08-18 00:33:09,363 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-08-18 00:33:09,363 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-08-18 00:33:09,363 [ scc.merge] INFO Already up to date.
2024-08-18 00:33:09,363 [ scc.merge] INFO
2024-08-18 00:33:09,363 [ scc.merge] INFO Merged PRs:
2024-08-18 00:33:09,363 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-08-18 00:33:09,363 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-08-18 00:33:09,363 [ scc.merge] INFO
2024-08-18 00:33:09,363 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-08-18 00:33:09,363 [ scc.git] DEBUG Calling 'git remote'
2024-08-18 00:33:09,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-08-18 00:33:09,369 [ scc.git] DEBUG Calling 'git remote'
2024-08-18 00:33:09,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-08-18 00:33:09,374 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-08-18 00:33:09,374 [ scc.git] DEBUG Calling 'git remote'
2024-08-18 00:33:09,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-08-18 00:33:09,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-08-18 00:33:09,379 [ scc.git] DEBUG Calling 'git remote'
2024-08-18 00:33:09,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-08-18 00:33:09,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-08-18 00:33:09,386 [ scc.git] DEBUG Calling 'git remote'
2024-08-18 00:33:09,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-08-18 00:33:09,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-08-18 00:33:09,392 [ scc.git] DEBUG Calling 'git remote'
2024-08-18 00:33:09,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
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Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
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Entering 'omero-py'
HEAD detached from 749a68ac
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 7cd445ce3
nothing to commit, working tree clean
HEAD detached from 18cc8a4
nothing to commit, working tree clean
2024-08-18 00:33:36,551 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS