Started by upstream project "Trigger" build number 411
originally caused by:
 Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf
The recommended git tool is: NONE
No credentials specified
 > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
Commit message: "Merge pull request #17 from jburel/python3"
 > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10
 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git
 > git --version # timeout=10
 > git --version # 'git version 2.43.5'
 > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 1c829a14b02172dd8b49d7d2848c0cd077efa496 (refs/remotes/origin/master)
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 1c829a14b02172dd8b49d7d2848c0cd077efa496 # timeout=10
Commit message: "Merge pull request #310 from ome/dependabot/submodules/omero-web-4b979f8"
 > git rev-list --no-walk 1c829a14b02172dd8b49d7d2848c0cd077efa496 # timeout=10
Cleaning workspace
 > git rev-parse --verify HEAD # timeout=10
Resetting working tree
 > git reset --hard # timeout=10
 > git clean -fdx # timeout=10
 > git submodule foreach --recursive git reset --hard # timeout=10
 > git submodule foreach --recursive git clean -fdx # timeout=10
 > git remote # timeout=10
 > git submodule init # timeout=10
 > git submodule sync # timeout=10
 > git config --get remote.origin.url # timeout=10
 > git submodule init # timeout=10
 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
 > git config --get submodule.omero-py.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10
 > git config --get submodule.omero-web.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10
 > git config --get submodule.omero-marshal.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10
 > git config --get submodule.omero-dropbox.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10
 > git config --get submodule.omero-scripts.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10
 > git submodule update --init --recursive omero-py # timeout=10
 > git submodule update --init --recursive omero-web # timeout=10
 > git submodule update --init --recursive omero-marshal # timeout=10
 > git submodule update --init --recursive omero-dropbox # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 372
[Pipeline] sh
+ pushd build
~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-python-superbuild-push
+ python3 -m venv build/venv
 > git submodule update --init --recursive omero-scripts # timeout=10
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ python3 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3)
Collecting pip
  Using cached pip-25.0.1-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
  Attempting uninstall: pip
    Found existing installation: pip 21.2.3
    Uninstalling pip-21.2.3:
      Successfully uninstalled pip-21.2.3
Successfully installed pip-25.0.1
+ python3 -m pip install scc
Collecting scc
  Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
  Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
  Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
  Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
  Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB)
Collecting ruamel.yaml.jinja2 (from scc)
  Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
  Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
  Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
  Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
  Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
  Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB)
Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
  Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
Collecting Deprecated (from PyGithub>=1.54->scc)
  Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
  Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB)
Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached certifi-2025.1.31-py3-none-any.whl.metadata (2.5 kB)
Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
  Using cached wrapt-1.17.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB)
Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB)
Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached requests-2.32.3-py3-none-any.whl (64 kB)
Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB)
Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB)
Using cached certifi-2025.1.31-py3-none-any.whl (166 kB)
Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB)
Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (146 kB)
Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB)
Using cached idna-3.10-py3-none-any.whl (70 kB)
Using cached wrapt-1.17.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.1.31 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.2 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-03-23 00:36:40,610 [  scc.config] DEBUG Found github.token
2025-03-23 00:36:40,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:40,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:36:41,065 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:41,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:36:41,486 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:41,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-03-23 00:36:41,648 [      scc.gh] DEBUG 4332 remaining from 5000 (Reset at 00:03
2025-03-23 00:36:41,649 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-03-23 00:36:41,654 [     scc.git] DEBUG Check current status
2025-03-23 00:36:41,654 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-23 00:36:41,658 [     scc.git] DEBUG 1c829a1 Merge pull request #310 from ome/dependabot/submodules/omero-web-4b979f8
2025-03-23 00:36:41,659 [     scc.git] DEBUG Calling 'git submodule status'
2025-03-23 00:36:41,884 [     scc.git] DEBUG  01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-03-23 00:36:41,999 [     scc.git] DEBUG  6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-03-23 00:36:42,004 [     scc.git] DEBUG  05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412)
2025-03-23 00:36:42,008 [     scc.git] DEBUG  4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755)
2025-03-23 00:36:42,013 [     scc.git] DEBUG  4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847)
2025-03-23 00:36:42,018 [  scc.config] DEBUG Found remote.origin.url
2025-03-23 00:36:42,021 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:42,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2025-03-23 00:36:42,546 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:42,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-03-23 00:36:43,021 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:43,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-03-23 00:36:43,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:43,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-03-23 00:36:43,860 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:44,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-03-23 00:36:44,105 [     scc.git] DEBUG Resetting...
2025-03-23 00:36:44,105 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-03-23 00:36:44,113 [     scc.git] DEBUG HEAD is now at 1c829a1 Merge pull request #310 from ome/dependabot/submodules/omero-web-4b979f8
2025-03-23 00:36:44,113 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-03-23 00:36:44,176 [     scc.git] DEBUG Check current status
2025-03-23 00:36:44,176 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-23 00:36:44,180 [     scc.git] DEBUG 1c829a1 Merge pull request #310 from ome/dependabot/submodules/omero-web-4b979f8
2025-03-23 00:36:44,181 [     scc.git] DEBUG Calling 'git submodule status'
2025-03-23 00:36:44,225 [     scc.git] DEBUG  01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-03-23 00:36:44,229 [     scc.git] DEBUG  6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-03-23 00:36:44,233 [     scc.git] DEBUG  05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412)
2025-03-23 00:36:44,237 [     scc.git] DEBUG  4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755)
2025-03-23 00:36:44,243 [     scc.git] DEBUG  4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847)
2025-03-23 00:36:44,244 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-03-23 00:36:44,244 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-03-23 00:36:44,244 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-03-23 00:36:44,244 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-03-23 00:36:44,244 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-03-23 00:36:44,244 [    scc.repo] DEBUG ## PRs found:
2025-03-23 00:36:44,357 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:44,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2025-03-23 00:36:44,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:45,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/311 HTTP/1.1" 200 None
2025-03-23 00:36:45,202 [    scc.repo] DEBUG   # ... Include label: dependencies
2025-03-23 00:36:45,202 [    scc.repo] DEBUG   - PR 311 dependabot[bot] 'Bump omero-py from `05d5241` to `b52c31e`'
2025-03-23 00:36:45,202 [    scc.repo] DEBUG ## Branches found:
2025-03-23 00:36:45,202 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:36:45,202 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:36:45,210 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-03-23 00:36:45,220 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-03-23 00:36:45,220 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-03-23 00:36:45,226 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-03-23 00:36:45,231 [     scc.git] DEBUG Already up to date.

2025-03-23 00:36:45,231 [     scc.git] DEBUG Calling 'git fetch origin pull/311/head'
2025-03-23 00:36:45,549 [     scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-03-23 00:36:45,549 [     scc.git] DEBUG  * branch            refs/pull/311/head -> FETCH_HEAD
2025-03-23 00:36:45,557 [     scc.git] DEBUG ## Unique users: []
2025-03-23 00:36:45,557 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:36:45,557 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:36:45,562 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5209759b7cd70f7d10c77fde0c36412ba62dbbe5'
2025-03-23 00:36:45,641 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:36:45,647 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 311 (Bump omero-py from `05d5241` to `b52c31e`) 5209759b7cd70f7d10c77fde0c36412ba62dbbe5'
2025-03-23 00:36:45,659 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:36:45,661 [     scc.git] DEBUG  omero-py | 2 +-
2025-03-23 00:36:45,661 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2025-03-23 00:36:45,664 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:45,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:36:45,851 [     scc.git] DEBUG Calling 'git submodule update'
2025-03-23 00:36:46,493 [     scc.git] DEBUG Submodule path 'omero-py': checked out 'b52c31e91db7efc52eccb05adc787e38cd66d122'
2025-03-23 00:36:46,494 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:36:46,494 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:36:46,500 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-03-23 00:36:46,888 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fe14e6a1f10> has no local changes
2025-03-23 00:36:46,889 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-python-superbuild
Already up to date.

Merged PRs:
  - PR 311 dependabot[bot] 'Bump omero-py from `05d5241` to `b52c31e`'

Generated by OMERO-python-superbuild-push#351 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/351/)'
2025-03-23 00:36:46,924 [     scc.git] DEBUG [detached HEAD 7b5dc28] merge master -Dorg -Snone
2025-03-23 00:36:46,924 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2025-03-23 00:36:46,924 [   scc.merge] INFO  Already up to date.
2025-03-23 00:36:46,925 [   scc.merge] INFO  
2025-03-23 00:36:46,925 [   scc.merge] INFO  Merged PRs:
2025-03-23 00:36:46,925 [   scc.merge] INFO    - PR 311 dependabot[bot] 'Bump omero-py from `05d5241` to `b52c31e`'
2025-03-23 00:36:46,925 [   scc.merge] INFO  
2025-03-23 00:36:46,925 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-03-23 00:36:46,925 [     scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-py': checked out '505cb27f04c1836c7a7707509dab20b84521a090'
Submodule path 'omero-scripts': checked out '950b28b31e228ae7b317cbd159235faf4023e4dc'
Merge all submodules using repository configuration:
base-branch: master

submodules:
  omero-scripts:
    base-branch: develop
2025-03-23 00:36:49,542 [  scc.config] DEBUG Found github.token
2025-03-23 00:36:49,545 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:49,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:36:49,971 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:50,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:36:50,398 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:50,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-03-23 00:36:50,555 [      scc.gh] DEBUG 4322 remaining from 5000 (Reset at 00:03
2025-03-23 00:36:50,556 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-03-23 00:36:50,560 [     scc.git] DEBUG Check current status
2025-03-23 00:36:50,560 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-23 00:36:50,564 [     scc.git] DEBUG 7b5dc28 merge master -Dorg -Snone
2025-03-23 00:36:50,564 [     scc.git] DEBUG Calling 'git submodule status'
2025-03-23 00:36:50,612 [     scc.git] DEBUG  01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-03-23 00:36:50,616 [     scc.git] DEBUG  6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-03-23 00:36:50,621 [     scc.git] DEBUG +505cb27f04c1836c7a7707509dab20b84521a090 omero-py (v5.19.6-7-g505cb27f)
2025-03-23 00:36:50,626 [     scc.git] DEBUG +950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b)
2025-03-23 00:36:50,631 [     scc.git] DEBUG  4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847)
2025-03-23 00:36:50,637 [  scc.config] DEBUG Found remote.origin.url
2025-03-23 00:36:50,638 [     scc.git] DEBUG Reading repository configuration from repositories.yml
2025-03-23 00:36:50,639 [     scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
  omero-scripts:
    base-branch: develop

2025-03-23 00:36:50,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:51,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2025-03-23 00:36:51,337 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:51,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-03-23 00:36:51,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:52,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-03-23 00:36:52,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:52,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-03-23 00:36:52,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:52,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-03-23 00:36:52,905 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-23 00:36:52,965 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-03-23 00:36:52,965 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-03-23 00:36:52,970 [     scc.git] DEBUG Check current status
2025-03-23 00:36:52,970 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-23 00:36:52,974 [     scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build
2025-03-23 00:36:52,974 [     scc.git] DEBUG Calling 'git submodule status'
2025-03-23 00:36:53,022 [  scc.config] DEBUG Found remote.origin.url
2025-03-23 00:36:53,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:53,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2025-03-23 00:36:53,677 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:53,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-03-23 00:36:54,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:54,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-03-23 00:36:54,619 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:54,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-03-23 00:36:55,074 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:55,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-03-23 00:36:55,250 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-23 00:36:55,296 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-23 00:36:55,297 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-03-23 00:36:55,297 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-03-23 00:36:55,302 [     scc.git] DEBUG Check current status
2025-03-23 00:36:55,302 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-23 00:36:55,307 [     scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build
2025-03-23 00:36:55,307 [     scc.git] DEBUG Calling 'git submodule status'
2025-03-23 00:36:55,357 [  scc.config] DEBUG Found remote.origin.url
2025-03-23 00:36:55,502 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:55,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2025-03-23 00:36:56,006 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:56,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-03-23 00:36:56,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:56,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-03-23 00:36:56,925 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:57,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-03-23 00:36:57,348 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:57,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-03-23 00:36:57,519 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-23 00:36:57,564 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-23 00:36:57,565 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-03-23 00:36:57,565 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-03-23 00:36:57,570 [     scc.git] DEBUG Check current status
2025-03-23 00:36:57,570 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-23 00:36:57,574 [     scc.git] DEBUG 505cb27f Merge pull request #452 from multimeric/fix-451
2025-03-23 00:36:57,574 [     scc.git] DEBUG Calling 'git submodule status'
2025-03-23 00:36:57,621 [  scc.config] DEBUG Found remote.origin.url
2025-03-23 00:36:57,771 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:58,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2025-03-23 00:36:58,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:58,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-03-23 00:36:58,792 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:58,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-03-23 00:36:59,234 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:59,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-03-23 00:36:59,665 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:36:59,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-03-23 00:36:59,883 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-23 00:36:59,934 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-23 00:36:59,935 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-03-23 00:36:59,935 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-03-23 00:36:59,940 [     scc.git] DEBUG Check current status
2025-03-23 00:36:59,941 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-23 00:36:59,946 [     scc.git] DEBUG 950b28b Merge pull request #225 from will-moore/test_fixes
2025-03-23 00:36:59,946 [     scc.git] DEBUG Calling 'git submodule status'
2025-03-23 00:36:59,996 [  scc.config] DEBUG Found remote.origin.url
2025-03-23 00:36:59,997 [     scc.git] DEBUG Repository configuration:
base-branch: develop

2025-03-23 00:37:00,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:00,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2025-03-23 00:37:00,649 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:00,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-03-23 00:37:01,125 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:01,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-03-23 00:37:01,567 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:01,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-03-23 00:37:01,999 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:02,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-03-23 00:37:02,171 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-23 00:37:02,215 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-23 00:37:02,216 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-03-23 00:37:02,216 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-03-23 00:37:02,221 [     scc.git] DEBUG Check current status
2025-03-23 00:37:02,221 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-23 00:37:02,228 [     scc.git] DEBUG 4b979f847 Bump version: 5.29.0 → 5.29.1.dev0
2025-03-23 00:37:02,229 [     scc.git] DEBUG Calling 'git submodule status'
2025-03-23 00:37:02,275 [  scc.config] DEBUG Found remote.origin.url
2025-03-23 00:37:02,423 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:02,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2025-03-23 00:37:02,926 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:03,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-03-23 00:37:03,448 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:03,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-03-23 00:37:03,882 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:04,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-03-23 00:37:04,309 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:04,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-03-23 00:37:04,486 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-23 00:37:04,536 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-23 00:37:04,536 [     scc.git] DEBUG Resetting...
2025-03-23 00:37:04,536 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-03-23 00:37:04,545 [     scc.git] DEBUG HEAD is now at 7b5dc28 merge master -Dorg -Snone
2025-03-23 00:37:04,545 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2025-03-23 00:37:04,623 [     scc.git] DEBUG Submodule path 'omero-py': checked out 'b52c31e91db7efc52eccb05adc787e38cd66d122'
2025-03-23 00:37:04,643 [     scc.git] DEBUG Submodule path 'omero-scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-03-23 00:37:04,652 [     scc.git] DEBUG Check current status
2025-03-23 00:37:04,652 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-23 00:37:04,657 [     scc.git] DEBUG 7b5dc28 merge master -Dorg -Snone
2025-03-23 00:37:04,658 [     scc.git] DEBUG Calling 'git submodule status'
2025-03-23 00:37:04,707 [     scc.git] DEBUG  01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-03-23 00:37:04,711 [     scc.git] DEBUG  6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-03-23 00:37:04,716 [     scc.git] DEBUG  b52c31e91db7efc52eccb05adc787e38cd66d122 omero-py (v5.19.6-4-gb52c31e9)
2025-03-23 00:37:04,721 [     scc.git] DEBUG  4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755)
2025-03-23 00:37:04,727 [     scc.git] DEBUG  4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847)
2025-03-23 00:37:04,728 [   scc.merge] INFO  Merging Pull Request(s) based on master
2025-03-23 00:37:04,728 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2025-03-23 00:37:04,728 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2025-03-23 00:37:04,729 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2025-03-23 00:37:04,729 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2025-03-23 00:37:04,729 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2025-03-23 00:37:04,729 [    scc.repo] DEBUG ## PRs found:
2025-03-23 00:37:04,738 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:05,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2025-03-23 00:37:05,270 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:05,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/311 HTTP/1.1" 200 None
2025-03-23 00:37:05,503 [    scc.repo] DEBUG   # ... Include label: dependencies
2025-03-23 00:37:05,755 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:06,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/5209759b7cd70f7d10c77fde0c36412ba62dbbe5 HTTP/1.1" 200 None
2025-03-23 00:37:06,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:06,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/5209759b7cd70f7d10c77fde0c36412ba62dbbe5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:37:06,850 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:07,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/5209759b7cd70f7d10c77fde0c36412ba62dbbe5 HTTP/1.1" 200 None
2025-03-23 00:37:07,453 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:07,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/5209759b7cd70f7d10c77fde0c36412ba62dbbe5?per_page=1 HTTP/1.1" 200 2
2025-03-23 00:37:07,631 [    scc.repo] DEBUG   - PR 311 dependabot[bot] 'Bump omero-py from `05d5241` to `b52c31e`'
2025-03-23 00:37:07,631 [    scc.repo] DEBUG ## Branches found:
2025-03-23 00:37:07,631 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:37:07,631 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:37:07,636 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-03-23 00:37:07,640 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-03-23 00:37:07,641 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-03-23 00:37:07,645 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-03-23 00:37:07,651 [     scc.git] DEBUG Already up to date.

2025-03-23 00:37:07,651 [     scc.git] DEBUG Calling 'git fetch origin pull/311/head'
2025-03-23 00:37:07,961 [     scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-03-23 00:37:07,961 [     scc.git] DEBUG  * branch            refs/pull/311/head -> FETCH_HEAD
2025-03-23 00:37:07,969 [     scc.git] DEBUG ## Unique users: []
2025-03-23 00:37:07,970 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:37:07,970 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:37:07,975 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5209759b7cd70f7d10c77fde0c36412ba62dbbe5'
2025-03-23 00:37:07,983 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:37:07,989 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 311 (Bump omero-py from `05d5241` to `b52c31e`) 5209759b7cd70f7d10c77fde0c36412ba62dbbe5'
2025-03-23 00:37:07,995 [     scc.git] DEBUG Already up to date.
2025-03-23 00:37:07,997 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:08,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:37:08,162 [     scc.git] DEBUG Calling 'git submodule update'
2025-03-23 00:37:08,213 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:37:08,213 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:37:08,218 [    scc.repo] DEBUG ## PRs found:
2025-03-23 00:37:08,414 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:08,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2025-03-23 00:37:08,913 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:09,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2025-03-23 00:37:09,418 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:09,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2025-03-23 00:37:09,927 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:10,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2025-03-23 00:37:10,468 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:10,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:37:10,940 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:11,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2025-03-23 00:37:11,492 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:11,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2025-03-23 00:37:11,660 [    scc.repo] DEBUG   - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2025-03-23 00:37:11,660 [    scc.repo] DEBUG ## Branches found:
2025-03-23 00:37:11,660 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-03-23 00:37:11,660 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:37:11,660 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:37:11,665 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-03-23 00:37:11,670 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-03-23 00:37:11,670 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-03-23 00:37:11,676 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-03-23 00:37:11,682 [     scc.git] DEBUG Already up to date.

2025-03-23 00:37:11,682 [     scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2025-03-23 00:37:12,017 [     scc.git] DEBUG From https://github.com/ome/omero-dropbox
2025-03-23 00:37:12,018 [     scc.git] DEBUG  * branch            refs/pull/16/head -> FETCH_HEAD
2025-03-23 00:37:12,024 [     scc.git] DEBUG ## Unique users: []
2025-03-23 00:37:12,024 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:37:12,024 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:37:12,029 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2025-03-23 00:37:12,037 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:37:12,042 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2025-03-23 00:37:12,080 [     scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2025-03-23 00:37:12,081 [     scc.git] DEBUG Auto-merging src/fsDirectory.py
2025-03-23 00:37:12,081 [     scc.git] DEBUG Auto-merging src/fsDropBox.py
2025-03-23 00:37:12,081 [     scc.git] DEBUG Auto-merging src/fsLists.py
2025-03-23 00:37:12,081 [     scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2025-03-23 00:37:12,081 [     scc.git] DEBUG Auto-merging src/fsMonitor.py
2025-03-23 00:37:12,081 [     scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2025-03-23 00:37:12,081 [     scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2025-03-23 00:37:12,081 [     scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2025-03-23 00:37:12,082 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:37:12,087 [     scc.git] DEBUG  src/fsAbstractPlatformMonitor.py |  6 +++---
2025-03-23 00:37:12,087 [     scc.git] DEBUG  src/fsDirectory.py               | 46 ++++++++++++++++++++--------------------
2025-03-23 00:37:12,087 [     scc.git] DEBUG  src/fsDropBox.py                 | 24 ++++++++++-----------
2025-03-23 00:37:12,087 [     scc.git] DEBUG  src/fsLists.py                   | 14 ++++++------
2025-03-23 00:37:12,087 [     scc.git] DEBUG  src/fsMac-10-5-Monitor.py        | 10 ++++-----
2025-03-23 00:37:12,087 [     scc.git] DEBUG  src/fsMonitor.py                 | 24 ++++++++++-----------
2025-03-23 00:37:12,087 [     scc.git] DEBUG  src/fsMonitorServer.py           | 10 ++++-----
2025-03-23 00:37:12,087 [     scc.git] DEBUG  src/fsPyinotifyMonitor.py        |  8 +++----
2025-03-23 00:37:12,087 [     scc.git] DEBUG  src/fsWin-XP-Monitor.py          | 20 ++++++++---------
2025-03-23 00:37:12,087 [     scc.git] DEBUG  9 files changed, 81 insertions(+), 81 deletions(-)
2025-03-23 00:37:12,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:12,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:37:12,267 [     scc.git] DEBUG Calling 'git submodule update'
2025-03-23 00:37:12,316 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:37:12,317 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:37:12,321 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-23 00:37:12,368 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-03-23 00:37:12,376 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f50197973d0> has no local changes
2025-03-23 00:37:12,377 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Generated by OMERO-python-superbuild-push#351 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/351/)'
2025-03-23 00:37:12,387 [     scc.git] DEBUG [detached HEAD 3a1d550] merge master -Dorg -Ssuccess-only
2025-03-23 00:37:12,388 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-23 00:37:12,388 [    scc.repo] DEBUG ## PRs found:
2025-03-23 00:37:12,519 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:12,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2025-03-23 00:37:13,095 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:13,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2025-03-23 00:37:13,605 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:13,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2025-03-23 00:37:14,076 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:14,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2025-03-23 00:37:14,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:14,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2025-03-23 00:37:15,031 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:15,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2025-03-23 00:37:15,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:15,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:37:16,031 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:16,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2025-03-23 00:37:16,478 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:16,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2025-03-23 00:37:16,655 [    scc.repo] DEBUG   - PR 69 will-moore 'Roi encoder allows Shape None'
2025-03-23 00:37:16,906 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:17,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2025-03-23 00:37:17,377 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:17,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2025-03-23 00:37:17,843 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:18,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2025-03-23 00:37:18,334 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:18,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2025-03-23 00:37:18,553 [    scc.repo] DEBUG ## Branches found:
2025-03-23 00:37:18,553 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-03-23 00:37:18,553 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:37:18,553 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:37:18,558 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-03-23 00:37:18,562 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-03-23 00:37:18,563 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-03-23 00:37:18,567 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-03-23 00:37:18,573 [     scc.git] DEBUG Already up to date.

2025-03-23 00:37:18,573 [     scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2025-03-23 00:37:18,919 [     scc.git] DEBUG From https://github.com/ome/omero-marshal
2025-03-23 00:37:18,919 [     scc.git] DEBUG  * branch            refs/pull/69/head -> FETCH_HEAD
2025-03-23 00:37:18,925 [     scc.git] DEBUG ## Unique users: []
2025-03-23 00:37:18,926 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:37:18,926 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:37:18,931 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2025-03-23 00:37:18,938 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:37:18,943 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2025-03-23 00:37:18,960 [     scc.git] DEBUG Auto-merging tests/unit/conftest.py
2025-03-23 00:37:18,961 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:37:18,965 [     scc.git] DEBUG  omero_marshal/encode/encoders/roi.py | 5 +++--
2025-03-23 00:37:18,965 [     scc.git] DEBUG  tests/unit/conftest.py               | 5 ++++-
2025-03-23 00:37:18,965 [     scc.git] DEBUG  2 files changed, 7 insertions(+), 3 deletions(-)
2025-03-23 00:37:18,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:19,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:37:19,128 [     scc.git] DEBUG Calling 'git submodule update'
2025-03-23 00:37:19,178 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:37:19,178 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:37:19,183 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-23 00:37:19,230 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-03-23 00:37:19,237 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f5019729f10> has no local changes
2025-03-23 00:37:19,237 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-marshal
Excluded PRs:
  - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Generated by OMERO-python-superbuild-push#351 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/351/)'
2025-03-23 00:37:19,247 [     scc.git] DEBUG [detached HEAD 23d4b4b] merge master -Dorg -Ssuccess-only
2025-03-23 00:37:19,247 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-23 00:37:19,248 [    scc.repo] DEBUG ## PRs found:
2025-03-23 00:37:19,380 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:19,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2025-03-23 00:37:20,093 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:20,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/455 HTTP/1.1" 200 None
2025-03-23 00:37:20,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:20,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1b84cf37672d7cf24719f29a5ef72696e747db41 HTTP/1.1" 200 None
2025-03-23 00:37:21,057 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:21,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1b84cf37672d7cf24719f29a5ef72696e747db41/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:37:21,554 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:21,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1b84cf37672d7cf24719f29a5ef72696e747db41/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-23 00:37:22,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:22,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1b84cf37672d7cf24719f29a5ef72696e747db41 HTTP/1.1" 200 None
2025-03-23 00:37:22,572 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:22,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/1b84cf37672d7cf24719f29a5ef72696e747db41?per_page=1 HTTP/1.1" 200 None
2025-03-23 00:37:23,014 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:23,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1b84cf37672d7cf24719f29a5ef72696e747db41 HTTP/1.1" 200 None
2025-03-23 00:37:23,465 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:23,651 [    scc.repo] DEBUG   - PR 455 sbesson 'Bump code generated omero-blitz-python dependency to version 5.8.1'
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2025-03-23 00:37:27,565 [    scc.repo] DEBUG   - PR 454 sbesson 'Remove all usage of sha library in favor of hashlib'
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2025-03-23 00:37:31,925 [    scc.repo] DEBUG   - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo'
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2025-03-23 00:37:33,360 [    scc.repo] DEBUG   # ... Include label: include
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2025-03-23 00:37:36,212 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:36,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:36,963 [    scc.repo] DEBUG   - PR 447 jmuhlich 'Change ignoreExeptions default to empty tuple'
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2025-03-23 00:37:39,168 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:39,730 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:40,306 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:40,749 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:41,242 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:41,452 [    scc.repo] DEBUG   - PR 445 sbesson 'Remove numpy<2 capping'
2025-03-23 00:37:41,705 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:42,427 [    scc.repo] DEBUG   # ... Exclude label: exclude
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2025-03-23 00:37:43,433 [    scc.repo] DEBUG   # ... Include label: include
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2025-03-23 00:37:44,725 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:45,763 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:46,228 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:46,683 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:46,881 [    scc.repo] DEBUG   - PR 427 Rdornier 'Add fileset folder creation'
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2025-03-23 00:37:49,191 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:50,200 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:50,644 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:51,121 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:51,315 [    scc.repo] DEBUG   - PR 408 jburel 'remove deprecated method'
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2025-03-23 00:37:53,051 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-23 00:37:55,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:37:55,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:55,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2025-03-23 00:37:55,947 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:56,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2025-03-23 00:37:56,141 [    scc.repo] DEBUG   - PR 391 joshmoore 'Add jstack command'
2025-03-23 00:37:56,393 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:56,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2025-03-23 00:37:56,865 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:57,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b6f3e2d8daf295a4e3f020269ed6c10391fb13c HTTP/1.1" 200 None
2025-03-23 00:37:57,592 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:57,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b6f3e2d8daf295a4e3f020269ed6c10391fb13c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:37:58,083 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:58,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b6f3e2d8daf295a4e3f020269ed6c10391fb13c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-23 00:37:58,563 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:58,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b6f3e2d8daf295a4e3f020269ed6c10391fb13c HTTP/1.1" 200 None
2025-03-23 00:37:59,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:37:59,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b6f3e2d8daf295a4e3f020269ed6c10391fb13c?per_page=1 HTTP/1.1" 200 None
2025-03-23 00:37:59,517 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:00,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b6f3e2d8daf295a4e3f020269ed6c10391fb13c HTTP/1.1" 200 None
2025-03-23 00:38:00,311 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:00,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b6f3e2d8daf295a4e3f020269ed6c10391fb13c/status HTTP/1.1" 200 None
2025-03-23 00:38:00,540 [    scc.repo] DEBUG   - PR 387 will-moore 'Numpy pixels type'
2025-03-23 00:38:00,792 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:01,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2025-03-23 00:38:01,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:01,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2025-03-23 00:38:01,771 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:02,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-03-23 00:38:02,302 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:02,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:38:02,770 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:03,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-23 00:38:03,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:03,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-03-23 00:38:03,720 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:03,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2025-03-23 00:38:04,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:04,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-03-23 00:38:04,663 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:04,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2025-03-23 00:38:04,878 [    scc.repo] DEBUG   - PR 332 jburel 'Build conda'
2025-03-23 00:38:05,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:05,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2025-03-23 00:38:05,609 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:05,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2025-03-23 00:38:06,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:06,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2025-03-23 00:38:06,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:06,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:38:07,043 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:07,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2025-03-23 00:38:07,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:07,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2025-03-23 00:38:07,772 [    scc.repo] DEBUG   - PR 299 joshmoore 'Add parents and children to omero obj'
2025-03-23 00:38:08,023 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:08,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2025-03-23 00:38:08,485 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:08,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2025-03-23 00:38:08,957 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:09,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:38:09,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:09,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2025-03-23 00:38:09,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:10,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2025-03-23 00:38:10,119 [    scc.repo] DEBUG   - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2025-03-23 00:38:10,370 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:10,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2025-03-23 00:38:10,874 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:11,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2025-03-23 00:38:11,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:11,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2025-03-23 00:38:11,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:12,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:38:12,348 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:12,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2025-03-23 00:38:12,870 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:13,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2025-03-23 00:38:13,047 [    scc.repo] DEBUG   - PR 199 joshmoore 'user: allow setting default group'
2025-03-23 00:38:13,048 [    scc.repo] DEBUG ## Branches found:
2025-03-23 00:38:13,048 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-03-23 00:38:13,048 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:38:13,048 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:13,054 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-03-23 00:38:13,058 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-03-23 00:38:13,059 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-03-23 00:38:13,140 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-03-23 00:38:13,162 [     scc.git] DEBUG Updating b52c31e9..505cb27f

2025-03-23 00:38:13,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:13,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/452 HTTP/1.1" 200 None
2025-03-23 00:38:13,664 [     scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2025-03-23 00:38:15,964 [     scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-23 00:38:15,964 [     scc.git] DEBUG  * branch              refs/pull/199/head -> FETCH_HEAD
2025-03-23 00:38:15,969 [     scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2025-03-23 00:38:16,271 [     scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-23 00:38:16,271 [     scc.git] DEBUG  * branch              refs/pull/266/head -> FETCH_HEAD
2025-03-23 00:38:16,277 [     scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2025-03-23 00:38:16,593 [     scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-23 00:38:16,593 [     scc.git] DEBUG  * branch              refs/pull/299/head -> FETCH_HEAD
2025-03-23 00:38:16,599 [     scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2025-03-23 00:38:17,039 [     scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-23 00:38:17,039 [     scc.git] DEBUG  * branch              refs/pull/332/head -> FETCH_HEAD
2025-03-23 00:38:17,045 [     scc.git] DEBUG Calling 'git fetch origin pull/387/head'
2025-03-23 00:38:17,614 [     scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-23 00:38:17,614 [     scc.git] DEBUG  * branch              refs/pull/387/head -> FETCH_HEAD
2025-03-23 00:38:17,620 [     scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2025-03-23 00:38:17,922 [     scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-23 00:38:17,922 [     scc.git] DEBUG  * branch              refs/pull/391/head -> FETCH_HEAD
2025-03-23 00:38:17,929 [     scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2025-03-23 00:38:18,342 [     scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-23 00:38:18,343 [     scc.git] DEBUG  * branch              refs/pull/408/head -> FETCH_HEAD
2025-03-23 00:38:18,349 [     scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2025-03-23 00:38:19,408 [     scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-23 00:38:19,408 [     scc.git] DEBUG  * branch              refs/pull/427/head -> FETCH_HEAD
2025-03-23 00:38:19,414 [     scc.git] DEBUG Calling 'git fetch origin pull/445/head'
2025-03-23 00:38:19,737 [     scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-23 00:38:19,738 [     scc.git] DEBUG  * branch              refs/pull/445/head -> FETCH_HEAD
2025-03-23 00:38:19,743 [     scc.git] DEBUG Calling 'git fetch origin pull/447/head'
2025-03-23 00:38:20,133 [     scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-23 00:38:20,133 [     scc.git] DEBUG  * branch              refs/pull/447/head -> FETCH_HEAD
2025-03-23 00:38:20,139 [     scc.git] DEBUG Calling 'git fetch origin pull/453/head'
2025-03-23 00:38:20,743 [     scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-23 00:38:20,743 [     scc.git] DEBUG  * branch              refs/pull/453/head -> FETCH_HEAD
2025-03-23 00:38:20,748 [     scc.git] DEBUG Calling 'git fetch origin pull/454/head'
2025-03-23 00:38:21,210 [     scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-23 00:38:21,211 [     scc.git] DEBUG  * branch              refs/pull/454/head -> FETCH_HEAD
2025-03-23 00:38:21,216 [     scc.git] DEBUG Calling 'git fetch origin pull/455/head'
2025-03-23 00:38:21,508 [     scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-23 00:38:21,508 [     scc.git] DEBUG  * branch              refs/pull/455/head -> FETCH_HEAD
2025-03-23 00:38:21,514 [     scc.git] DEBUG ## Unique users: []
2025-03-23 00:38:21,514 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:38:21,514 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:21,519 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2025-03-23 00:38:21,532 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:21,536 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2025-03-23 00:38:21,636 [     scc.git] DEBUG Auto-merging src/omero/cli.py
2025-03-23 00:38:21,636 [     scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2025-03-23 00:38:21,637 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:38:21,642 [     scc.git] DEBUG  src/omero/cli.py          |  6 ++++++
2025-03-23 00:38:21,642 [     scc.git] DEBUG  src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2025-03-23 00:38:21,642 [     scc.git] DEBUG  2 files changed, 39 insertions(+), 3 deletions(-)
2025-03-23 00:38:21,645 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:21,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:38:21,850 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2025-03-23 00:38:21,863 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:21,869 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2025-03-23 00:38:22,013 [     scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2025-03-23 00:38:22,015 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:38:22,019 [     scc.git] DEBUG  src/omero/plugins/search.py | 13 +++++++++----
2025-03-23 00:38:22,019 [     scc.git] DEBUG  1 file changed, 9 insertions(+), 4 deletions(-)
2025-03-23 00:38:22,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:22,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:38:22,262 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2025-03-23 00:38:22,277 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:22,282 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2025-03-23 00:38:22,513 [     scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2025-03-23 00:38:22,513 [     scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2025-03-23 00:38:22,515 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:38:22,519 [     scc.git] DEBUG  src/omero/plugins/obj.py      | 69 ++++++++++++++++++++++++++++++++++++++++++-
2025-03-23 00:38:22,519 [     scc.git] DEBUG  test/unit/clitest/test_obj.py |  2 +-
2025-03-23 00:38:22,519 [     scc.git] DEBUG  2 files changed, 69 insertions(+), 2 deletions(-)
2025-03-23 00:38:22,522 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:22,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:38:22,688 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2025-03-23 00:38:22,702 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:22,706 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2025-03-23 00:38:22,728 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:38:22,732 [     scc.git] DEBUG  .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2025-03-23 00:38:22,733 [     scc.git] DEBUG  connect.py                    | 11 +++++++++++
2025-03-23 00:38:22,733 [     scc.git] DEBUG  2 files changed, 48 insertions(+)
2025-03-23 00:38:22,733 [     scc.git] DEBUG  create mode 100644 .github/workflows/install.yml
2025-03-23 00:38:22,733 [     scc.git] DEBUG  create mode 100644 connect.py
2025-03-23 00:38:22,940 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:23,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:38:23,098 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5b6f3e2d8daf295a4e3f020269ed6c10391fb13c'
2025-03-23 00:38:23,112 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:23,117 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 387 (Numpy pixels type) 5b6f3e2d8daf295a4e3f020269ed6c10391fb13c'
2025-03-23 00:38:23,355 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2025-03-23 00:38:23,356 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:38:23,364 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 50 +++++++++++++++++++++++--------------------
2025-03-23 00:38:23,364 [     scc.git] DEBUG  1 file changed, 27 insertions(+), 23 deletions(-)
2025-03-23 00:38:23,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:23,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:38:23,537 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2025-03-23 00:38:23,551 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:23,556 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2025-03-23 00:38:23,583 [     scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2025-03-23 00:38:23,585 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:38:23,589 [     scc.git] DEBUG  src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2025-03-23 00:38:23,589 [     scc.git] DEBUG  1 file changed, 59 insertions(+), 2 deletions(-)
2025-03-23 00:38:23,789 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:23,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:38:23,952 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2025-03-23 00:38:23,966 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:23,971 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2025-03-23 00:38:24,218 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2025-03-23 00:38:24,219 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:38:24,228 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 36 ------------------------------------
2025-03-23 00:38:24,228 [     scc.git] DEBUG  1 file changed, 36 deletions(-)
2025-03-23 00:38:24,231 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:24,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:38:24,410 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2025-03-23 00:38:24,424 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:24,431 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2025-03-23 00:38:24,524 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:38:24,528 [     scc.git] DEBUG  .gitignore                    |  1 +
2025-03-23 00:38:24,528 [     scc.git] DEBUG  src/omero/plugins/download.py | 17 ++++++++++++-----
2025-03-23 00:38:24,528 [     scc.git] DEBUG  2 files changed, 13 insertions(+), 5 deletions(-)
2025-03-23 00:38:24,662 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:24,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:38:24,823 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1b8c6f6bef2c3eb802692d41cb4f716af5644d10'
2025-03-23 00:38:24,838 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:24,842 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 445 (Remove numpy<2 capping) 1b8c6f6bef2c3eb802692d41cb4f716af5644d10'
2025-03-23 00:38:24,901 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:38:24,905 [     scc.git] DEBUG  setup.py | 3 ++-
2025-03-23 00:38:24,905 [     scc.git] DEBUG  1 file changed, 2 insertions(+), 1 deletion(-)
2025-03-23 00:38:25,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:25,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:38:25,239 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...84690ac11bf275bdc07d80dd74ff3fc8fc2577b1'
2025-03-23 00:38:25,254 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:25,260 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 447 (Change ignoreExeptions default to empty tuple) 84690ac11bf275bdc07d80dd74ff3fc8fc2577b1'
2025-03-23 00:38:25,394 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2025-03-23 00:38:25,396 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:38:25,404 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 2 +-
2025-03-23 00:38:25,404 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2025-03-23 00:38:25,492 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:25,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:38:25,652 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...ff9ad445b6af7725ab17a39185630b8919e42bab'
2025-03-23 00:38:25,671 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:25,676 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 453 (getObject() and getExternalInfo() load externalInfo) ff9ad445b6af7725ab17a39185630b8919e42bab'
2025-03-23 00:38:25,874 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2025-03-23 00:38:25,874 [     scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2025-03-23 00:38:25,874 [     scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero/plugins/obj.py
2025-03-23 00:38:25,874 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-03-23 00:38:25,875 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-03-23 00:38:25,882 [     scc.git] DEBUG Calling 'git reset --hard f3c6f042c60c510d65f09ca5e5a3ddf4d9fd8dc9'
2025-03-23 00:38:25,892 [     scc.git] DEBUG HEAD is now at f3c6f042 merge master -Dorg -Ssuccess-only: PR 447 (Change ignoreExeptions default to empty tuple)
2025-03-23 00:38:25,904 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:26,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:38:26,061 [     scc.git] DEBUG Calling 'git merge-base 505cb27f04c1836c7a7707509dab20b84521a090 ff9ad445b6af7725ab17a39185630b8919e42bab'
2025-03-23 00:38:26,067 [     scc.git] DEBUG Calling 'git diff --name-only 05d52412ff7d6c4e3a515717d2807b1a21bf4291..505cb27f04c1836c7a7707509dab20b84521a090'
2025-03-23 00:38:26,072 [     scc.git] INFO    - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#351](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/351/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/351/consoleText) for more details.
Possible conflicts:
  - PR #299 joshmoore 'Add parents and children to omero obj'
    - src/omero/plugins/obj.py

--conflicts

2025-03-23 00:38:26,076 [  scc.config] DEBUG Found github.token
2025-03-23 00:38:26,077 [     scc.git] DEBUG Adding comment to issue #453.
2025-03-23 00:38:26,315 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:26,849 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-py/issues/453/comments HTTP/1.1" 201 2044
2025-03-23 00:38:26,850 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1e9ac6f8c9c19fcfd080f827d2923da8bcc75bd0'
2025-03-23 00:38:26,865 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:26,870 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 454 (Remove all usage of sha library in favor of hashlib) 1e9ac6f8c9c19fcfd080f827d2923da8bcc75bd0'
2025-03-23 00:38:26,935 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2025-03-23 00:38:26,936 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:38:26,945 [     scc.git] DEBUG  src/omero/clients.py                    |  4 ++--
2025-03-23 00:38:26,945 [     scc.git] DEBUG  src/omero/gateway/__init__.py           |  9 ++-------
2025-03-23 00:38:26,945 [     scc.git] DEBUG  src/omero/plugins/_upload_deprecated.py |  7 -------
2025-03-23 00:38:26,945 [     scc.git] DEBUG  src/omero/plugins/script.py             |  4 ++--
2025-03-23 00:38:26,945 [     scc.git] DEBUG  src/omero/util/script_utils.py          | 11 +++--------
2025-03-23 00:38:26,945 [     scc.git] DEBUG  5 files changed, 9 insertions(+), 26 deletions(-)
2025-03-23 00:38:27,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:27,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:38:27,280 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1b84cf37672d7cf24719f29a5ef72696e747db41'
2025-03-23 00:38:27,296 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:27,301 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 455 (Bump code generated omero-blitz-python dependency to version 5.8.1) 1b84cf37672d7cf24719f29a5ef72696e747db41'
2025-03-23 00:38:27,342 [     scc.git] DEBUG Auto-merging setup.py
2025-03-23 00:38:27,344 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:38:27,347 [     scc.git] DEBUG  setup.py | 2 +-
2025-03-23 00:38:27,347 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2025-03-23 00:38:27,532 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:27,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:38:27,700 [     scc.git] DEBUG Calling 'git submodule update'
2025-03-23 00:38:27,744 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:38:27,745 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:27,750 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-23 00:38:27,791 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-03-23 00:38:27,799 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f50197a4190> has no local changes
2025-03-23 00:38:27,799 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-py
Excluded PRs:
  - PR 450 multimeric 'Add model stubs' (user: multimeric)
  - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
Updating b52c31e9..505cb27f
Previously merged:
  - PR 452 multimeric 'Fix #451'

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 387 will-moore 'Numpy pixels type'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'
  - PR 427 Rdornier 'Add fileset folder creation'
  - PR 445 sbesson 'Remove numpy<2 capping'
  - PR 447 jmuhlich 'Change ignoreExeptions default to empty tuple'
  - PR 454 sbesson 'Remove all usage of sha library in favor of hashlib'
  - PR 455 sbesson 'Bump code generated omero-blitz-python dependency to version 5.8.1'

Conflicting PRs (not included):
  - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo'

Generated by OMERO-python-superbuild-push#351 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/351/)'
2025-03-23 00:38:27,809 [     scc.git] DEBUG [detached HEAD c396d64f] merge master -Dorg -Ssuccess-only
2025-03-23 00:38:27,809 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-23 00:38:27,809 [     scc.git] INFO  Overriding base-branch from master to develop
2025-03-23 00:38:27,809 [    scc.repo] DEBUG ## PRs found:
2025-03-23 00:38:27,952 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:28,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-03-23 00:38:28,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:28,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-03-23 00:38:29,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:29,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-03-23 00:38:29,518 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:29,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-03-23 00:38:29,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:30,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:38:30,517 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:30,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-23 00:38:31,076 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:31,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-03-23 00:38:31,548 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:31,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-03-23 00:38:31,728 [    scc.repo] DEBUG   - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-03-23 00:38:31,980 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:32,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-03-23 00:38:32,470 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:32,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-03-23 00:38:32,936 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:33,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-03-23 00:38:33,474 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:33,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:38:33,939 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:34,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-03-23 00:38:34,394 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:34,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-03-23 00:38:34,583 [    scc.repo] DEBUG   - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-03-23 00:38:34,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:35,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-03-23 00:38:35,328 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:35,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-03-23 00:38:35,853 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:36,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-03-23 00:38:36,368 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:36,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-03-23 00:38:36,688 [    scc.repo] DEBUG ## Branches found:
2025-03-23 00:38:36,688 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-03-23 00:38:36,688 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:38:36,688 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:36,694 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-03-23 00:38:36,698 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-03-23 00:38:36,698 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-03-23 00:38:36,704 [     scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-03-23 00:38:36,714 [     scc.git] DEBUG Updating 4b4c755..950b28b

2025-03-23 00:38:36,939 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:37,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2025-03-23 00:38:37,382 [     scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-03-23 00:38:38,195 [     scc.git] DEBUG From https://github.com/ome/omero-scripts
2025-03-23 00:38:38,195 [     scc.git] DEBUG  * branch            refs/pull/202/head -> FETCH_HEAD
2025-03-23 00:38:38,202 [     scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-03-23 00:38:39,016 [     scc.git] DEBUG From https://github.com/ome/omero-scripts
2025-03-23 00:38:39,016 [     scc.git] DEBUG  * branch            refs/pull/223/head -> FETCH_HEAD
2025-03-23 00:38:39,022 [     scc.git] DEBUG ## Unique users: []
2025-03-23 00:38:39,022 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:38:39,022 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:39,028 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-03-23 00:38:39,036 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:39,041 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-03-23 00:38:39,068 [     scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19.  Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-03-23 00:38:39,068 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-03-23 00:38:39,069 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-03-23 00:38:39,074 [     scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc'
2025-03-23 00:38:39,080 [     scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes
2025-03-23 00:38:39,083 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:39,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:38:39,243 [     scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-03-23 00:38:39,252 [     scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc'
2025-03-23 00:38:39,258 [     scc.git] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#351](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/351/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/351/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - omero/annotation_scripts/KeyVal_to_csv.py

--conflicts

2025-03-23 00:38:39,262 [  scc.config] DEBUG Found github.token
2025-03-23 00:38:39,263 [     scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-03-23 00:38:39,263 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-03-23 00:38:39,269 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:39,273 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-03-23 00:38:39,286 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:38:39,289 [     scc.git] DEBUG  omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-03-23 00:38:39,289 [     scc.git] DEBUG  1 file changed, 8 insertions(+), 1 deletion(-)
2025-03-23 00:38:39,495 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:39,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:38:39,662 [     scc.git] DEBUG Calling 'git submodule update'
2025-03-23 00:38:39,709 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:38:39,709 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:38:39,714 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-23 00:38:39,757 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-03-23 00:38:39,763 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f5019792670> has no local changes
2025-03-23 00:38:39,764 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-scripts
Excluded PRs:
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..950b28b
Previously merged:
  - PR 225 will-moore 'Fix param names and assertion texts in tests'

Merged PRs:
  - PR 223 will-moore 'don't attempt ROI stats on big images'

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Generated by OMERO-python-superbuild-push#351 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/351/)'
2025-03-23 00:38:39,772 [     scc.git] DEBUG [detached HEAD 8a11f70] merge master -Dorg -Ssuccess-only
2025-03-23 00:38:39,773 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-23 00:38:39,773 [    scc.repo] DEBUG ## PRs found:
2025-03-23 00:38:39,914 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:40,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2025-03-23 00:38:40,593 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:40,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None
2025-03-23 00:38:41,064 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:41,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None
2025-03-23 00:38:41,530 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:41,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None
2025-03-23 00:38:42,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:42,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:38:42,515 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:42,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-23 00:38:42,991 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:43,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None
2025-03-23 00:38:43,445 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:43,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None
2025-03-23 00:38:43,883 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:44,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None
2025-03-23 00:38:44,435 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:44,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None
2025-03-23 00:38:44,643 [    scc.repo] DEBUG   - PR 614 sbesson 'CodeQL workflow updates'
2025-03-23 00:38:44,894 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:45,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None
2025-03-23 00:38:45,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:45,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None
2025-03-23 00:38:45,888 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:46,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None
2025-03-23 00:38:46,431 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:46,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:38:46,900 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:47,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-23 00:38:47,397 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:47,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None
2025-03-23 00:38:47,857 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:48,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/a8c190ba1c823672143ab90d77020d652e2c084d?per_page=1 HTTP/1.1" 200 None
2025-03-23 00:38:48,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:48,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None
2025-03-23 00:38:48,767 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:48,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/status HTTP/1.1" 200 None
2025-03-23 00:38:48,965 [    scc.repo] DEBUG   - PR 613 will-moore 'externalInfo display'
2025-03-23 00:38:49,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:49,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None
2025-03-23 00:38:49,787 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:50,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-03-23 00:38:50,303 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:50,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:38:50,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:51,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-23 00:38:51,294 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:51,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-03-23 00:38:51,805 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:52,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None
2025-03-23 00:38:52,260 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:52,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-03-23 00:38:52,733 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:52,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None
2025-03-23 00:38:52,925 [    scc.repo] DEBUG   - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2025-03-23 00:38:53,177 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:53,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/606 HTTP/1.1" 200 None
2025-03-23 00:38:53,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:53,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None
2025-03-23 00:38:54,179 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:54,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:38:54,676 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:54,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-23 00:38:55,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:55,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None
2025-03-23 00:38:55,655 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:55,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b360c3125f9471bf4001447f35c732507c2f2022?per_page=1 HTTP/1.1" 200 None
2025-03-23 00:38:56,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:56,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None
2025-03-23 00:38:56,532 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:56,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/status HTTP/1.1" 200 None
2025-03-23 00:38:56,723 [    scc.repo] DEBUG   - PR 606 knabar 'Fix issues related to images with very high channel count'
2025-03-23 00:38:56,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:57,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2025-03-23 00:38:57,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:57,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2025-03-23 00:38:57,944 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:58,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-03-23 00:38:58,468 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:58,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:38:58,944 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:59,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-23 00:38:59,441 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:38:59,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-03-23 00:38:59,932 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:00,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2025-03-23 00:39:00,370 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:00,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-03-23 00:39:00,847 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:01,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2025-03-23 00:39:01,051 [    scc.repo] DEBUG   - PR 604 will-moore 'Right panel perf'
2025-03-23 00:39:01,302 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:01,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2025-03-23 00:39:01,526 [    scc.repo] DEBUG   # ... Include label: include
2025-03-23 00:39:01,778 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:02,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-03-23 00:39:02,302 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:02,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:39:02,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:03,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-23 00:39:03,334 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:03,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-03-23 00:39:03,849 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:04,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None
2025-03-23 00:39:04,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:04,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-03-23 00:39:04,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:04,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None
2025-03-23 00:39:04,926 [    scc.repo] DEBUG   - PR 602 Tom-TBT 'Inherit all annotations'
2025-03-23 00:39:05,177 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:05,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None
2025-03-23 00:39:05,673 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:05,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None
2025-03-23 00:39:06,163 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:06,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-03-23 00:39:06,669 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:06,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:39:07,147 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:07,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-23 00:39:07,665 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:07,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-03-23 00:39:08,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:08,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None
2025-03-23 00:39:08,537 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:08,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-03-23 00:39:09,021 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:09,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None
2025-03-23 00:39:09,203 [    scc.repo] DEBUG   - PR 596 sukunis 'Linkify can parse anchor tag'
2025-03-23 00:39:09,455 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:09,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None
2025-03-23 00:39:09,927 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:10,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None
2025-03-23 00:39:10,377 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:10,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-03-23 00:39:10,896 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:11,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:39:11,417 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:11,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-23 00:39:11,937 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:12,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-03-23 00:39:12,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:12,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None
2025-03-23 00:39:12,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:13,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-03-23 00:39:13,329 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:13,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None
2025-03-23 00:39:13,517 [    scc.repo] DEBUG   - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2025-03-23 00:39:13,768 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:14,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2025-03-23 00:39:14,270 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:14,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2025-03-23 00:39:14,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:14,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2025-03-23 00:39:15,218 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:15,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2025-03-23 00:39:15,718 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:16,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-03-23 00:39:16,267 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:16,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:39:16,851 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:17,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-23 00:39:17,350 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:17,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-03-23 00:39:17,882 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:18,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2025-03-23 00:39:18,314 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:18,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-03-23 00:39:18,759 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:18,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2025-03-23 00:39:18,959 [    scc.repo] DEBUG   - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2025-03-23 00:39:19,210 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:19,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2025-03-23 00:39:19,724 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:19,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2025-03-23 00:39:20,188 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:20,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-03-23 00:39:20,712 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:20,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:39:21,160 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:21,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-03-23 00:39:21,646 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:21,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2
2025-03-23 00:39:21,815 [    scc.repo] DEBUG   - PR 527 will-moore 'Add some initial CSP settings to test'
2025-03-23 00:39:22,067 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:22,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2025-03-23 00:39:22,566 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:22,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2025-03-23 00:39:23,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:23,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2025-03-23 00:39:23,573 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:23,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-23 00:39:24,069 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:24,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-23 00:39:24,323 [    scc.repo] DEBUG ## Branches found:
2025-03-23 00:39:24,323 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-03-23 00:39:24,323 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:39:24,323 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:39:24,329 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-03-23 00:39:24,334 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-03-23 00:39:24,335 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-03-23 00:39:24,341 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-03-23 00:39:24,348 [     scc.git] DEBUG Already up to date.

2025-03-23 00:39:24,348 [     scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2025-03-23 00:39:26,894 [     scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-23 00:39:26,895 [     scc.git] DEBUG  * branch                refs/pull/527/head -> FETCH_HEAD
2025-03-23 00:39:26,900 [     scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2025-03-23 00:39:27,230 [     scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-23 00:39:27,230 [     scc.git] DEBUG  * branch                refs/pull/534/head -> FETCH_HEAD
2025-03-23 00:39:27,236 [     scc.git] DEBUG Calling 'git fetch origin pull/595/head'
2025-03-23 00:39:28,295 [     scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-23 00:39:28,296 [     scc.git] DEBUG  * branch                refs/pull/595/head -> FETCH_HEAD
2025-03-23 00:39:28,302 [     scc.git] DEBUG Calling 'git fetch origin pull/596/head'
2025-03-23 00:39:28,818 [     scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-23 00:39:28,818 [     scc.git] DEBUG  * branch                refs/pull/596/head -> FETCH_HEAD
2025-03-23 00:39:28,824 [     scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2025-03-23 00:39:29,149 [     scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-23 00:39:29,149 [     scc.git] DEBUG  * branch                refs/pull/602/head -> FETCH_HEAD
2025-03-23 00:39:29,155 [     scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2025-03-23 00:39:29,851 [     scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-23 00:39:29,851 [     scc.git] DEBUG  * branch                refs/pull/604/head -> FETCH_HEAD
2025-03-23 00:39:29,858 [     scc.git] DEBUG Calling 'git fetch origin pull/606/head'
2025-03-23 00:39:30,258 [     scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-23 00:39:30,258 [     scc.git] DEBUG  * branch                refs/pull/606/head -> FETCH_HEAD
2025-03-23 00:39:30,264 [     scc.git] DEBUG Calling 'git fetch origin pull/612/head'
2025-03-23 00:39:30,625 [     scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-23 00:39:30,625 [     scc.git] DEBUG  * branch                refs/pull/612/head -> FETCH_HEAD
2025-03-23 00:39:30,632 [     scc.git] DEBUG Calling 'git fetch origin pull/613/head'
2025-03-23 00:39:31,592 [     scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-23 00:39:31,592 [     scc.git] DEBUG  * branch                refs/pull/613/head -> FETCH_HEAD
2025-03-23 00:39:31,598 [     scc.git] DEBUG Calling 'git fetch origin pull/614/head'
2025-03-23 00:39:32,125 [     scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-23 00:39:32,126 [     scc.git] DEBUG  * branch                refs/pull/614/head -> FETCH_HEAD
2025-03-23 00:39:32,132 [     scc.git] DEBUG ## Unique users: []
2025-03-23 00:39:32,132 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:39:32,132 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:39:32,138 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2025-03-23 00:39:32,151 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:39:32,156 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2025-03-23 00:39:32,291 [     scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-03-23 00:39:32,291 [     scc.git] DEBUG Auto-merging setup.py
2025-03-23 00:39:32,292 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:39:32,297 [     scc.git] DEBUG  omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2025-03-23 00:39:32,297 [     scc.git] DEBUG  setup.py             |  1 +
2025-03-23 00:39:32,297 [     scc.git] DEBUG  2 files changed, 42 insertions(+), 1 deletion(-)
2025-03-23 00:39:32,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:32,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:39:32,469 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2025-03-23 00:39:32,481 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:39:32,486 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2025-03-23 00:39:32,656 [     scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2025-03-23 00:39:32,657 [     scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2025-03-23 00:39:32,658 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:39:32,664 [     scc.git] DEBUG  omeroweb/webclient/webclient_gateway.py | 2 +-
2025-03-23 00:39:32,664 [     scc.git] DEBUG  omeroweb/webgateway/marshal.py          | 4 ++--
2025-03-23 00:39:32,664 [     scc.git] DEBUG  2 files changed, 3 insertions(+), 3 deletions(-)
2025-03-23 00:39:32,721 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:32,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:39:32,912 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb'
2025-03-23 00:39:32,923 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:39:32,929 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb'
2025-03-23 00:39:33,134 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:39:33,139 [     scc.git] DEBUG  omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +-
2025-03-23 00:39:33,139 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2025-03-23 00:39:33,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:33,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:39:33,341 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8'
2025-03-23 00:39:33,353 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:39:33,357 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8'
2025-03-23 00:39:33,441 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:39:33,445 [     scc.git] DEBUG  .../webclient/javascript/ome.webclient.actions.js  | 26 ++++++++++++++++++++--
2025-03-23 00:39:33,446 [     scc.git] DEBUG  1 file changed, 24 insertions(+), 2 deletions(-)
2025-03-23 00:39:33,593 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:33,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:39:33,777 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2025-03-23 00:39:33,789 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:39:33,794 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2025-03-23 00:39:34,062 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:39:34,068 [     scc.git] DEBUG  omeroweb/webclient/static/webclient/css/dusty.css  |   1 -
2025-03-23 00:39:34,069 [     scc.git] DEBUG  .../javascript/ome.right_panel_comments_pane.js    | 134 +++++++++++++++++++--
2025-03-23 00:39:34,069 [     scc.git] DEBUG  .../javascript/ome.right_panel_fileanns_pane.js    |  80 +++++++++++-
2025-03-23 00:39:34,069 [     scc.git] DEBUG  .../javascript/ome.right_panel_mapanns_pane.js     |   6 +-
2025-03-23 00:39:34,069 [     scc.git] DEBUG  .../javascript/ome.right_panel_ratings_pane.js     |  33 ++++-
2025-03-23 00:39:34,069 [     scc.git] DEBUG  .../javascript/ome.right_panel_tags_pane.js        |  92 ++++++++++++--
2025-03-23 00:39:34,069 [     scc.git] DEBUG  .../webclient/annotations/comments_underscore.html |  58 +++++++--
2025-03-23 00:39:34,069 [     scc.git] DEBUG  .../webclient/annotations/fileanns_underscore.html |  81 ++++++++-----
2025-03-23 00:39:34,069 [     scc.git] DEBUG  .../webclient/annotations/mapanns_underscore.html  |   4 +
2025-03-23 00:39:34,069 [     scc.git] DEBUG  .../webclient/annotations/ratings_underscore.html  |   4 +-
2025-03-23 00:39:34,069 [     scc.git] DEBUG  .../webclient/annotations/tags_underscore.html     |  30 +++--
2025-03-23 00:39:34,069 [     scc.git] DEBUG  11 files changed, 447 insertions(+), 76 deletions(-)
2025-03-23 00:39:34,071 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:34,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:39:34,231 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2025-03-23 00:39:34,244 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:39:34,248 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2025-03-23 00:39:34,569 [     scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2025-03-23 00:39:34,571 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:39:34,578 [     scc.git] DEBUG  omeroweb/webclient/controller/container.py         | 66 ++++++++++------------
2025-03-23 00:39:34,578 [     scc.git] DEBUG  .../webclient/annotations/annotations_share.html   | 12 +---
2025-03-23 00:39:34,578 [     scc.git] DEBUG  omeroweb/webclient/views.py                        | 51 -----------------
2025-03-23 00:39:34,578 [     scc.git] DEBUG  3 files changed, 31 insertions(+), 98 deletions(-)
2025-03-23 00:39:34,581 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:34,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:39:34,737 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...b360c3125f9471bf4001447f35c732507c2f2022'
2025-03-23 00:39:34,749 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:39:34,754 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 606 (Fix issues related to images with very high channel count) b360c3125f9471bf4001447f35c732507c2f2022'
2025-03-23 00:39:35,010 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:39:35,015 [     scc.git] DEBUG  .../webgateway/static/webgateway/js/ome.viewport.js     | 17 +++++++++++++++--
2025-03-23 00:39:35,015 [     scc.git] DEBUG  1 file changed, 15 insertions(+), 2 deletions(-)
2025-03-23 00:39:35,018 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:35,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:39:35,184 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26'
2025-03-23 00:39:35,195 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:39:35,200 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26'
2025-03-23 00:39:35,327 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:39:35,332 [     scc.git] DEBUG  .../webgateway/static/webgateway/css/ome.body.css   |  2 ++
2025-03-23 00:39:35,332 [     scc.git] DEBUG  .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++----------
2025-03-23 00:39:35,332 [     scc.git] DEBUG  2 files changed, 13 insertions(+), 10 deletions(-)
2025-03-23 00:39:35,436 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:35,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:39:35,604 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...a8c190ba1c823672143ab90d77020d652e2c084d'
2025-03-23 00:39:35,616 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:39:35,630 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) a8c190ba1c823672143ab90d77020d652e2c084d'
2025-03-23 00:39:35,710 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:39:35,715 [     scc.git] DEBUG  .../webclient/annotations/includes/toolbar.html    | 42 ++++++++++++++++------
2025-03-23 00:39:35,715 [     scc.git] DEBUG  .../webclient/annotations/metadata_general.html    | 38 ++++++++++++++------
2025-03-23 00:39:35,715 [     scc.git] DEBUG  2 files changed, 60 insertions(+), 20 deletions(-)
2025-03-23 00:39:35,856 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:36,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:39:36,016 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3'
2025-03-23 00:39:36,029 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:39:36,034 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3'
2025-03-23 00:39:36,058 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-23 00:39:36,062 [     scc.git] DEBUG  .github/workflows/codeql-analysis.yml | 55 +++++++----------------------------
2025-03-23 00:39:36,062 [     scc.git] DEBUG  1 file changed, 11 insertions(+), 44 deletions(-)
2025-03-23 00:39:36,268 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:36,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:39:36,456 [     scc.git] DEBUG Calling 'git submodule update'
2025-03-23 00:39:36,505 [     scc.git] DEBUG Get sha1 of %s
2025-03-23 00:39:36,505 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-23 00:39:36,510 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-23 00:39:36,556 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-03-23 00:39:36,569 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f50186adf10> has no local changes
2025-03-23 00:39:36,570 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-web
Excluded PRs:
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
  - PR 595 sukunis 'linkify supports urls that include {}[] characters'
  - PR 596 sukunis 'Linkify can parse anchor tag'
  - PR 602 Tom-TBT 'Inherit all annotations'
  - PR 604 will-moore 'Right panel perf'
  - PR 606 knabar 'Fix issues related to images with very high channel count'
  - PR 612 will-moore 'Allow top_links to wrap if too many for space'
  - PR 613 will-moore 'externalInfo display'
  - PR 614 sbesson 'CodeQL workflow updates'

Generated by OMERO-python-superbuild-push#351 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/351/)'
2025-03-23 00:39:36,584 [     scc.git] DEBUG [detached HEAD 502a255f8] merge master -Dorg -Ssuccess-only
2025-03-23 00:39:36,584 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-23 00:39:36,585 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-23 00:39:36,644 [  scc.config] DEBUG Found submodule.omero-dropbox.url
2025-03-23 00:39:36,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:36,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:39:36,888 [  scc.config] DEBUG Found submodule.omero-marshal.url
2025-03-23 00:39:37,126 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:37,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:39:37,306 [  scc.config] DEBUG Found submodule.omero-py.url
2025-03-23 00:39:37,544 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:37,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:39:37,714 [  scc.config] DEBUG Found submodule.omero-scripts.url
2025-03-23 00:39:37,952 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:38,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:39:38,126 [  scc.config] DEBUG Found submodule.omero-web.url
2025-03-23 00:39:38,364 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-23 00:39:38,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-23 00:39:38,537 [     scc.git] DEBUG Calling 'git status --porcelain'
2025-03-23 00:39:38,569 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f501bc4cf10> has local changes
2025-03-23 00:39:38,570 [     scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-python-superbuild
Already up to date.

Merged PRs:
  - PR 311 dependabot[bot] 'Bump omero-py from `05d5241` to `b52c31e`'

Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Repository: ome/omero-marshal
Excluded PRs:
  - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Repository: ome/omero-py
Excluded PRs:
  - PR 450 multimeric 'Add model stubs' (user: multimeric)
  - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
Updating b52c31e9..505cb27f
Previously merged:
  - PR 452 multimeric 'Fix #451'

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 387 will-moore 'Numpy pixels type'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'
  - PR 427 Rdornier 'Add fileset folder creation'
  - PR 445 sbesson 'Remove numpy<2 capping'
  - PR 447 jmuhlich 'Change ignoreExeptions default to empty tuple'
  - PR 454 sbesson 'Remove all usage of sha library in favor of hashlib'
  - PR 455 sbesson 'Bump code generated omero-blitz-python dependency to version 5.8.1'

Conflicting PRs (not included):
  - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo'

Repository: ome/omero-scripts
Excluded PRs:
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..950b28b
Previously merged:
  - PR 225 will-moore 'Fix param names and assertion texts in tests'

Merged PRs:
  - PR 223 will-moore 'don't attempt ROI stats on big images'

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Repository: ome/omero-web
Excluded PRs:
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
  - PR 595 sukunis 'linkify supports urls that include {}[] characters'
  - PR 596 sukunis 'Linkify can parse anchor tag'
  - PR 602 Tom-TBT 'Inherit all annotations'
  - PR 604 will-moore 'Right panel perf'
  - PR 606 knabar 'Fix issues related to images with very high channel count'
  - PR 612 will-moore 'Allow top_links to wrap if too many for space'
  - PR 613 will-moore 'externalInfo display'
  - PR 614 sbesson 'CodeQL workflow updates'

Generated by OMERO-python-superbuild-push#351 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/351/)'
2025-03-23 00:39:38,581 [     scc.git] DEBUG [detached HEAD fc53109] merge master -Dorg -Ssuccess-only
2025-03-23 00:39:38,581 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2025-03-23 00:39:38,581 [     scc.git] DEBUG  6 files changed, 10 insertions(+), 10 deletions(-)
2025-03-23 00:39:38,581 [   scc.merge] INFO  Already up to date.
2025-03-23 00:39:38,581 [   scc.merge] INFO  
2025-03-23 00:39:38,581 [   scc.merge] INFO  Merged PRs:
2025-03-23 00:39:38,581 [   scc.merge] INFO    - PR 311 dependabot[bot] 'Bump omero-py from `05d5241` to `b52c31e`'
2025-03-23 00:39:38,581 [   scc.merge] INFO  
2025-03-23 00:39:38,581 [   scc.merge] INFO  Repository: ome/omero-dropbox
2025-03-23 00:39:38,581 [   scc.merge] INFO  Already up to date.
2025-03-23 00:39:38,581 [   scc.merge] INFO  
2025-03-23 00:39:38,581 [   scc.merge] INFO  Merged PRs:
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2025-03-23 00:39:38,582 [   scc.merge] INFO  
2025-03-23 00:39:38,582 [   scc.merge] INFO  Repository: ome/omero-marshal
2025-03-23 00:39:38,582 [   scc.merge] INFO  Excluded PRs:
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2025-03-23 00:39:38,582 [   scc.merge] INFO  Already up to date.
2025-03-23 00:39:38,582 [   scc.merge] INFO  
2025-03-23 00:39:38,582 [   scc.merge] INFO  Merged PRs:
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 69 will-moore 'Roi encoder allows Shape None'
2025-03-23 00:39:38,582 [   scc.merge] INFO  
2025-03-23 00:39:38,582 [   scc.merge] INFO  Repository: ome/omero-py
2025-03-23 00:39:38,582 [   scc.merge] INFO  Excluded PRs:
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 450 multimeric 'Add model stubs' (user: multimeric)
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2025-03-23 00:39:38,582 [   scc.merge] INFO  Updating b52c31e9..505cb27f
2025-03-23 00:39:38,582 [   scc.merge] INFO  Previously merged:
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 452 multimeric 'Fix #451'
2025-03-23 00:39:38,582 [   scc.merge] INFO  
2025-03-23 00:39:38,582 [   scc.merge] INFO  Merged PRs:
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 199 joshmoore 'user: allow setting default group'
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 299 joshmoore 'Add parents and children to omero obj'
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 332 jburel 'Build conda'
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 387 will-moore 'Numpy pixels type'
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 391 joshmoore 'Add jstack command'
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 408 jburel 'remove deprecated method'
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 427 Rdornier 'Add fileset folder creation'
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 445 sbesson 'Remove numpy<2 capping'
2025-03-23 00:39:38,582 [   scc.merge] INFO    - PR 447 jmuhlich 'Change ignoreExeptions default to empty tuple'
2025-03-23 00:39:38,583 [   scc.merge] INFO    - PR 454 sbesson 'Remove all usage of sha library in favor of hashlib'
2025-03-23 00:39:38,583 [   scc.merge] INFO    - PR 455 sbesson 'Bump code generated omero-blitz-python dependency to version 5.8.1'
2025-03-23 00:39:38,583 [   scc.merge] INFO  
2025-03-23 00:39:38,583 [   scc.merge] INFO  Conflicting PRs (not included):
2025-03-23 00:39:38,583 [   scc.merge] INFO    - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo'
2025-03-23 00:39:38,583 [   scc.merge] INFO  
2025-03-23 00:39:38,583 [   scc.merge] INFO  Repository: ome/omero-scripts
2025-03-23 00:39:38,583 [   scc.merge] INFO  Excluded PRs:
2025-03-23 00:39:38,583 [   scc.merge] INFO    - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-03-23 00:39:38,583 [   scc.merge] INFO    - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-03-23 00:39:38,583 [   scc.merge] INFO  Updating 4b4c755..950b28b
2025-03-23 00:39:38,583 [   scc.merge] INFO  Previously merged:
2025-03-23 00:39:38,583 [   scc.merge] INFO    - PR 225 will-moore 'Fix param names and assertion texts in tests'
2025-03-23 00:39:38,583 [   scc.merge] INFO  
2025-03-23 00:39:38,583 [   scc.merge] INFO  Merged PRs:
2025-03-23 00:39:38,583 [   scc.merge] INFO    - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-03-23 00:39:38,583 [   scc.merge] INFO  
2025-03-23 00:39:38,583 [   scc.merge] INFO  Conflicting PRs (not included):
2025-03-23 00:39:38,583 [   scc.merge] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-03-23 00:39:38,583 [   scc.merge] INFO  
2025-03-23 00:39:38,583 [   scc.merge] INFO  Repository: ome/omero-web
2025-03-23 00:39:38,583 [   scc.merge] INFO  Excluded PRs:
2025-03-23 00:39:38,583 [   scc.merge] INFO    - PR 535 will-moore 'Initial working browser history' (stage: draft)
2025-03-23 00:39:38,583 [   scc.merge] INFO    - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2025-03-23 00:39:38,583 [   scc.merge] INFO  Already up to date.
2025-03-23 00:39:38,583 [   scc.merge] INFO  
2025-03-23 00:39:38,583 [   scc.merge] INFO  Merged PRs:
2025-03-23 00:39:38,583 [   scc.merge] INFO    - PR 527 will-moore 'Add some initial CSP settings to test'
2025-03-23 00:39:38,583 [   scc.merge] INFO    - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2025-03-23 00:39:38,583 [   scc.merge] INFO    - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2025-03-23 00:39:38,583 [   scc.merge] INFO    - PR 596 sukunis 'Linkify can parse anchor tag'
2025-03-23 00:39:38,583 [   scc.merge] INFO    - PR 602 Tom-TBT 'Inherit all annotations'
2025-03-23 00:39:38,583 [   scc.merge] INFO    - PR 604 will-moore 'Right panel perf'
2025-03-23 00:39:38,584 [   scc.merge] INFO    - PR 606 knabar 'Fix issues related to images with very high channel count'
2025-03-23 00:39:38,584 [   scc.merge] INFO    - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2025-03-23 00:39:38,584 [   scc.merge] INFO    - PR 613 will-moore 'externalInfo display'
2025-03-23 00:39:38,584 [   scc.merge] INFO    - PR 614 sbesson 'CodeQL workflow updates'
2025-03-23 00:39:38,584 [   scc.merge] INFO  
2025-03-23 00:39:38,584 [   scc.merge] DEBUG Cleaning remote branches created for merging
2025-03-23 00:39:38,584 [     scc.git] DEBUG Calling 'git remote'
2025-03-23 00:39:38,589 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-03-23 00:39:38,589 [     scc.git] DEBUG Calling 'git remote'
2025-03-23 00:39:38,594 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-23 00:39:38,594 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-03-23 00:39:38,594 [     scc.git] DEBUG Calling 'git remote'
2025-03-23 00:39:38,599 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-23 00:39:38,599 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-03-23 00:39:38,599 [     scc.git] DEBUG Calling 'git remote'
2025-03-23 00:39:38,603 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-23 00:39:38,603 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-03-23 00:39:38,604 [     scc.git] DEBUG Calling 'git remote'
2025-03-23 00:39:38,608 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-23 00:39:38,608 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-03-23 00:39:38,608 [     scc.git] DEBUG Calling 'git remote'
2025-03-23 00:39:38,613 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
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Up-to-date: 
grep: build.gradle: No such file or directory
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Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
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Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from 01fa0c5
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from 6d44f66
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from b52c31e9
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 4b4c755
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 4b979f847
nothing to commit, working tree clean
HEAD detached from 1c829a1
nothing to commit, working tree clean
2025-03-23 00:40:08,724 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS