Started by upstream project "Trigger" build number 49 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 2524209fa303040cb896adb393aa091fe485414d (refs/remotes/origin/master) Commit message: "Merge pull request #272 from ome/dependabot/submodules/omero-web-0e4013c" > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 2524209fa303040cb896adb393aa091fe485414d # timeout=10 > git rev-list --no-walk 2524209fa303040cb896adb393aa091fe485414d # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 42 [Pipeline] sh > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.11.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.31.0-py3-none-any.whl (62 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.11.0-py3-none-any.whl (34 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl (4.6 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.5 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.11.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-04-23 05:21:50,490 [ scc.config] DEBUG Found github.token 2024-04-23 05:21:50,493 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-04-23 05:21:50,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:21:51,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:21:51,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-04-23 05:21:51,563 [ scc.gh] DEBUG 4596 remaining from 5000 (Reset at 05:04 2024-04-23 05:21:51,564 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-23 05:21:51,569 [ scc.git] DEBUG Check current status 2024-04-23 05:21:51,570 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-23 05:21:51,576 [ scc.git] DEBUG 2524209 Merge pull request #272 from ome/dependabot/submodules/omero-web-0e4013c 2024-04-23 05:21:51,577 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-23 05:21:51,621 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350) 2024-04-23 05:21:51,624 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-04-23 05:21:51,627 [ scc.git] DEBUG d76e17aa58ca755d239e9e8005712cd78239c62e omero-py (v5.19.1-1-gd76e17aa) 2024-04-23 05:21:51,631 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7) 2024-04-23 05:21:51,687 [ scc.git] DEBUG 0e4013c65acba6525cd5eabf869611c9e1311ba7 omero-web (v5.25.0-5-g0e4013c65) 2024-04-23 05:21:51,692 [ scc.config] DEBUG Found remote.origin.url 2024-04-23 05:21:52,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-04-23 05:21:52,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-23 05:21:52,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-23 05:21:53,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-23 05:21:53,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-23 05:21:53,786 [ scc.git] DEBUG Resetting... 2024-04-23 05:21:53,786 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-04-23 05:21:53,793 [ scc.git] DEBUG HEAD is now at 2524209 Merge pull request #272 from ome/dependabot/submodules/omero-web-0e4013c 2024-04-23 05:21:53,793 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-04-23 05:21:53,854 [ scc.git] DEBUG Check current status 2024-04-23 05:21:53,854 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-23 05:21:53,859 [ scc.git] DEBUG 2524209 Merge pull request #272 from ome/dependabot/submodules/omero-web-0e4013c 2024-04-23 05:21:53,860 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-23 05:21:53,904 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350) 2024-04-23 05:21:53,906 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-04-23 05:21:53,910 [ scc.git] DEBUG d76e17aa58ca755d239e9e8005712cd78239c62e omero-py (v5.19.1-1-gd76e17aa) 2024-04-23 05:21:53,915 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7) 2024-04-23 05:21:53,920 [ scc.git] DEBUG 0e4013c65acba6525cd5eabf869611c9e1311ba7 omero-web (v5.25.0-5-g0e4013c65) 2024-04-23 05:21:53,921 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-04-23 05:21:53,921 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-04-23 05:21:53,921 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-04-23 05:21:53,921 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-04-23 05:21:53,921 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-04-23 05:21:53,921 [ scc.repo] DEBUG ## PRs found: 2024-04-23 05:21:54,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2024-04-23 05:21:54,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/275 HTTP/1.1" 200 None 2024-04-23 05:21:54,766 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-23 05:21:54,766 [ scc.repo] DEBUG - PR 275 dependabot[bot] 'Bump omero-scripts from `2078ac7` to `5a90893`' 2024-04-23 05:21:55,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/274 HTTP/1.1" 200 None 2024-04-23 05:21:55,241 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-23 05:21:55,242 [ scc.repo] DEBUG - PR 274 dependabot[bot] 'Bump omero-py from `d76e17a` to `3eb47d1`' 2024-04-23 05:21:55,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/273 HTTP/1.1" 200 None 2024-04-23 05:21:55,699 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-23 05:21:55,699 [ scc.repo] DEBUG - PR 273 dependabot[bot] 'Bump omero-web from `0e4013c` to `02bd670`' 2024-04-23 05:21:55,699 [ scc.repo] DEBUG ## Branches found: 2024-04-23 05:21:55,700 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:21:55,700 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:21:55,704 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-23 05:21:55,707 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-23 05:21:55,708 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-23 05:21:55,712 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-23 05:21:55,717 [ scc.git] DEBUG Already up to date. 2024-04-23 05:21:55,718 [ scc.git] DEBUG Calling 'git fetch origin pull/273/head' 2024-04-23 05:21:56,058 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2024-04-23 05:21:56,058 [ scc.git] DEBUG * branch refs/pull/273/head -> FETCH_HEAD 2024-04-23 05:21:56,064 [ scc.git] DEBUG Calling 'git fetch origin pull/274/head' 2024-04-23 05:21:56,455 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2024-04-23 05:21:56,455 [ scc.git] DEBUG * branch refs/pull/274/head -> FETCH_HEAD 2024-04-23 05:21:56,460 [ scc.git] DEBUG Calling 'git fetch origin pull/275/head' 2024-04-23 05:21:56,838 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2024-04-23 05:21:56,839 [ scc.git] DEBUG * branch refs/pull/275/head -> FETCH_HEAD 2024-04-23 05:21:56,844 [ scc.git] DEBUG ## Unique users: [] 2024-04-23 05:21:56,844 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:21:56,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:21:56,848 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0662e2a8daa446818d06e407980c3b27ef4e41a5' 2024-04-23 05:21:56,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:21:56,878 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 273 (Bump omero-web from `0e4013c` to `02bd670`) 0662e2a8daa446818d06e407980c3b27ef4e41a5' 2024-04-23 05:21:56,887 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:21:56,889 [ scc.git] DEBUG omero-web | 2 +- 2024-04-23 05:21:56,889 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-04-23 05:21:57,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:21:57,041 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...662bf6882cfcfeaba47a732a9ebf3d43f651e686' 2024-04-23 05:21:57,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:21:57,051 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 274 (Bump omero-py from `d76e17a` to `3eb47d1`) 662bf6882cfcfeaba47a732a9ebf3d43f651e686' 2024-04-23 05:21:57,085 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:21:57,087 [ scc.git] DEBUG omero-py | 2 +- 2024-04-23 05:21:57,087 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-04-23 05:21:57,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:21:57,445 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc295f92ff3a693baf53b3847ba5ad2bb101c4b0' 2024-04-23 05:21:57,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:21:57,470 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 275 (Bump omero-scripts from `2078ac7` to `5a90893`) bc295f92ff3a693baf53b3847ba5ad2bb101c4b0' 2024-04-23 05:21:57,514 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:21:57,517 [ scc.git] DEBUG omero-scripts | 2 +- 2024-04-23 05:21:57,517 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-04-23 05:21:57,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:21:57,855 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-23 05:21:58,055 [ scc.git] DEBUG Submodule path 'omero-py': checked out '3eb47d17bd8ae6b56ea009d9cf3a1f62d7d33732' 2024-04-23 05:21:58,130 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '5a908933161233015332dd416c325c60c5b8bd3a' 2024-04-23 05:21:58,172 [ scc.git] DEBUG Submodule path 'omero-web': checked out '02bd670ca7628ecb293108f394ef062a66a7beb4' 2024-04-23 05:21:58,172 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:21:58,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:21:58,177 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-23 05:21:58,338 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4f76af9e80> has no local changes 2024-04-23 05:21:58,339 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 273 dependabot[bot] 'Bump omero-web from `0e4013c` to `02bd670`' - PR 274 dependabot[bot] 'Bump omero-py from `d76e17a` to `3eb47d1`' - PR 275 dependabot[bot] 'Bump omero-scripts from `2078ac7` to `5a90893`' Generated by OMERO-python-superbuild-push#40 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/40/)' 2024-04-23 05:21:58,368 [ scc.git] DEBUG [detached HEAD d44d51a] merge master -Dorg -Snone 2024-04-23 05:21:58,368 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-04-23 05:21:58,369 [ scc.merge] INFO Already up to date. 2024-04-23 05:21:58,369 [ scc.merge] INFO 2024-04-23 05:21:58,369 [ scc.merge] INFO Merged PRs: 2024-04-23 05:21:58,369 [ scc.merge] INFO - PR 273 dependabot[bot] 'Bump omero-web from `0e4013c` to `02bd670`' 2024-04-23 05:21:58,369 [ scc.merge] INFO - PR 274 dependabot[bot] 'Bump omero-py from `d76e17a` to `3eb47d1`' 2024-04-23 05:21:58,369 [ scc.merge] INFO - PR 275 dependabot[bot] 'Bump omero-scripts from `2078ac7` to `5a90893`' 2024-04-23 05:21:58,369 [ scc.merge] INFO 2024-04-23 05:21:58,369 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-04-23 05:21:58,369 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-04-23 05:22:00,825 [ scc.config] DEBUG Found github.token 2024-04-23 05:22:00,828 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-04-23 05:22:01,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:22:01,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:22:01,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-04-23 05:22:01,886 [ scc.gh] DEBUG 4582 remaining from 5000 (Reset at 05:04 2024-04-23 05:22:01,887 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-23 05:22:01,891 [ scc.git] DEBUG Check current status 2024-04-23 05:22:01,891 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-23 05:22:01,895 [ scc.git] DEBUG d44d51a merge master -Dorg -Snone 2024-04-23 05:22:01,896 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-23 05:22:01,953 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350) 2024-04-23 05:22:01,956 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-04-23 05:22:01,959 [ scc.git] DEBUG 3eb47d17bd8ae6b56ea009d9cf3a1f62d7d33732 omero-py (v5.19.1-3-g3eb47d17) 2024-04-23 05:22:01,963 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893) 2024-04-23 05:22:01,967 [ scc.git] DEBUG 02bd670ca7628ecb293108f394ef062a66a7beb4 omero-web (v5.25.0-7-g02bd670ca) 2024-04-23 05:22:01,972 [ scc.config] DEBUG Found remote.origin.url 2024-04-23 05:22:01,972 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-04-23 05:22:01,974 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-04-23 05:22:02,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-04-23 05:22:02,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-23 05:22:03,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-23 05:22:03,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-23 05:22:04,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-23 05:22:04,116 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-23 05:22:04,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-04-23 05:22:04,170 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-23 05:22:04,174 [ scc.git] DEBUG Check current status 2024-04-23 05:22:04,174 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-23 05:22:04,178 [ scc.git] DEBUG 5863350 Merge pull request #22 from sbesson/python311 2024-04-23 05:22:04,178 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-23 05:22:04,230 [ scc.config] DEBUG Found remote.origin.url 2024-04-23 05:22:04,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2024-04-23 05:22:05,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-23 05:22:05,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-23 05:22:05,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-23 05:22:06,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-23 05:22:06,327 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-23 05:22:06,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-04-23 05:22:06,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-04-23 05:22:06,376 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-23 05:22:06,381 [ scc.git] DEBUG Check current status 2024-04-23 05:22:06,381 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-23 05:22:06,385 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312 2024-04-23 05:22:06,386 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-23 05:22:06,431 [ scc.config] DEBUG Found remote.origin.url 2024-04-23 05:22:06,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2024-04-23 05:22:07,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-23 05:22:07,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-23 05:22:08,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-23 05:22:08,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-23 05:22:08,502 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-23 05:22:08,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-04-23 05:22:08,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-04-23 05:22:08,568 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-23 05:22:08,573 [ scc.git] DEBUG Check current status 2024-04-23 05:22:08,573 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-23 05:22:08,593 [ scc.git] DEBUG 3eb47d17 Merge pull request #403 from sbesson/ice_windows 2024-04-23 05:22:08,593 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-23 05:22:08,642 [ scc.config] DEBUG Found remote.origin.url 2024-04-23 05:22:08,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2024-04-23 05:22:09,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-23 05:22:09,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-23 05:22:10,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-23 05:22:10,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-23 05:22:10,735 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-23 05:22:10,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-04-23 05:22:10,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-04-23 05:22:10,785 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-23 05:22:10,791 [ scc.git] DEBUG Check current status 2024-04-23 05:22:10,791 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-23 05:22:10,809 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-04-23 05:22:10,810 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-23 05:22:10,864 [ scc.config] DEBUG Found remote.origin.url 2024-04-23 05:22:10,865 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-04-23 05:22:11,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2024-04-23 05:22:11,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-23 05:22:12,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-23 05:22:12,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-23 05:22:12,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-23 05:22:12,972 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-23 05:22:13,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-04-23 05:22:13,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-04-23 05:22:13,012 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-23 05:22:13,017 [ scc.git] DEBUG Check current status 2024-04-23 05:22:13,017 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-23 05:22:13,033 [ scc.git] DEBUG 02bd670ca Merge pull request #551 from ome/pre-commit-ci-update-config 2024-04-23 05:22:13,034 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-23 05:22:13,077 [ scc.config] DEBUG Found remote.origin.url 2024-04-23 05:22:13,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2024-04-23 05:22:13,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-23 05:22:14,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-23 05:22:14,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-23 05:22:15,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-23 05:22:15,166 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-23 05:22:15,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-04-23 05:22:15,212 [ scc.git] DEBUG Resetting... 2024-04-23 05:22:15,212 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-04-23 05:22:15,221 [ scc.git] DEBUG HEAD is now at d44d51a merge master -Dorg -Snone 2024-04-23 05:22:15,222 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-04-23 05:22:15,281 [ scc.git] DEBUG Check current status 2024-04-23 05:22:15,282 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-23 05:22:15,291 [ scc.git] DEBUG d44d51a merge master -Dorg -Snone 2024-04-23 05:22:15,291 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-23 05:22:15,341 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350) 2024-04-23 05:22:15,344 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-04-23 05:22:15,347 [ scc.git] DEBUG 3eb47d17bd8ae6b56ea009d9cf3a1f62d7d33732 omero-py (v5.19.1-3-g3eb47d17) 2024-04-23 05:22:15,351 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893) 2024-04-23 05:22:15,354 [ scc.git] DEBUG 02bd670ca7628ecb293108f394ef062a66a7beb4 omero-web (v5.25.0-7-g02bd670ca) 2024-04-23 05:22:15,355 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-04-23 05:22:15,356 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-04-23 05:22:15,356 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-04-23 05:22:15,356 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-04-23 05:22:15,356 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-04-23 05:22:15,356 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-04-23 05:22:15,357 [ scc.repo] DEBUG ## PRs found: 2024-04-23 05:22:15,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2024-04-23 05:22:16,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/275 HTTP/1.1" 200 None 2024-04-23 05:22:16,130 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-23 05:22:16,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/bc295f92ff3a693baf53b3847ba5ad2bb101c4b0 HTTP/1.1" 200 None 2024-04-23 05:22:17,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/bc295f92ff3a693baf53b3847ba5ad2bb101c4b0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:22:17,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/bc295f92ff3a693baf53b3847ba5ad2bb101c4b0 HTTP/1.1" 200 None 2024-04-23 05:22:18,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/bc295f92ff3a693baf53b3847ba5ad2bb101c4b0?per_page=1 HTTP/1.1" 200 2 2024-04-23 05:22:18,078 [ scc.repo] DEBUG - PR 275 dependabot[bot] 'Bump omero-scripts from `2078ac7` to `5a90893`' 2024-04-23 05:22:18,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/274 HTTP/1.1" 200 None 2024-04-23 05:22:18,537 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-23 05:22:19,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/662bf6882cfcfeaba47a732a9ebf3d43f651e686 HTTP/1.1" 200 None 2024-04-23 05:22:19,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/662bf6882cfcfeaba47a732a9ebf3d43f651e686/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:22:20,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/662bf6882cfcfeaba47a732a9ebf3d43f651e686 HTTP/1.1" 200 None 2024-04-23 05:22:20,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/662bf6882cfcfeaba47a732a9ebf3d43f651e686?per_page=1 HTTP/1.1" 200 2 2024-04-23 05:22:20,433 [ scc.repo] DEBUG - PR 274 dependabot[bot] 'Bump omero-py from `d76e17a` to `3eb47d1`' 2024-04-23 05:22:20,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/273 HTTP/1.1" 200 None 2024-04-23 05:22:20,890 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-23 05:22:21,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/0662e2a8daa446818d06e407980c3b27ef4e41a5 HTTP/1.1" 200 None 2024-04-23 05:22:21,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/0662e2a8daa446818d06e407980c3b27ef4e41a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:22:22,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/0662e2a8daa446818d06e407980c3b27ef4e41a5 HTTP/1.1" 200 None 2024-04-23 05:22:22,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/0662e2a8daa446818d06e407980c3b27ef4e41a5?per_page=1 HTTP/1.1" 200 2 2024-04-23 05:22:22,839 [ scc.repo] DEBUG - PR 273 dependabot[bot] 'Bump omero-web from `0e4013c` to `02bd670`' 2024-04-23 05:22:22,839 [ scc.repo] DEBUG ## Branches found: 2024-04-23 05:22:22,839 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:22:22,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:22:22,845 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-23 05:22:22,850 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-23 05:22:22,851 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-23 05:22:22,857 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-23 05:22:22,863 [ scc.git] DEBUG Already up to date. 2024-04-23 05:22:22,863 [ scc.git] DEBUG Calling 'git fetch origin pull/273/head' 2024-04-23 05:22:23,248 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2024-04-23 05:22:23,248 [ scc.git] DEBUG * branch refs/pull/273/head -> FETCH_HEAD 2024-04-23 05:22:23,255 [ scc.git] DEBUG Calling 'git fetch origin pull/274/head' 2024-04-23 05:22:23,634 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2024-04-23 05:22:23,634 [ scc.git] DEBUG * branch refs/pull/274/head -> FETCH_HEAD 2024-04-23 05:22:23,641 [ scc.git] DEBUG Calling 'git fetch origin pull/275/head' 2024-04-23 05:22:24,033 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2024-04-23 05:22:24,034 [ scc.git] DEBUG * branch refs/pull/275/head -> FETCH_HEAD 2024-04-23 05:22:24,045 [ scc.git] DEBUG ## Unique users: [] 2024-04-23 05:22:24,046 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:22:24,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:22:24,053 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0662e2a8daa446818d06e407980c3b27ef4e41a5' 2024-04-23 05:22:24,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:22:24,069 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 273 (Bump omero-web from `0e4013c` to `02bd670`) 0662e2a8daa446818d06e407980c3b27ef4e41a5' 2024-04-23 05:22:24,080 [ scc.git] DEBUG Already up to date. 2024-04-23 05:22:24,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:22:24,242 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...662bf6882cfcfeaba47a732a9ebf3d43f651e686' 2024-04-23 05:22:24,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:22:24,253 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 274 (Bump omero-py from `d76e17a` to `3eb47d1`) 662bf6882cfcfeaba47a732a9ebf3d43f651e686' 2024-04-23 05:22:24,257 [ scc.git] DEBUG Already up to date. 2024-04-23 05:22:24,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:22:24,649 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc295f92ff3a693baf53b3847ba5ad2bb101c4b0' 2024-04-23 05:22:24,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:22:24,658 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 275 (Bump omero-scripts from `2078ac7` to `5a90893`) bc295f92ff3a693baf53b3847ba5ad2bb101c4b0' 2024-04-23 05:22:24,662 [ scc.git] DEBUG Already up to date. 2024-04-23 05:22:25,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:22:25,066 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-23 05:22:25,117 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:22:25,117 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:22:25,123 [ scc.repo] DEBUG ## PRs found: 2024-04-23 05:22:25,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2024-04-23 05:22:26,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/23 HTTP/1.1" 200 None 2024-04-23 05:22:26,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/23/comments HTTP/1.1" 200 None 2024-04-23 05:22:27,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8 HTTP/1.1" 200 None 2024-04-23 05:22:27,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:22:27,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:22:28,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8 HTTP/1.1" 200 None 2024-04-23 05:22:28,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8?per_page=1 HTTP/1.1" 200 2 2024-04-23 05:22:28,922 [ scc.repo] DEBUG - PR 23 sbesson 'Remove python-future compatibility code' 2024-04-23 05:22:29,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2024-04-23 05:22:29,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2024-04-23 05:22:30,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-04-23 05:22:30,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:22:31,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-04-23 05:22:31,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2024-04-23 05:22:31,723 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-04-23 05:22:31,723 [ scc.repo] DEBUG ## Branches found: 2024-04-23 05:22:31,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-04-23 05:22:31,723 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:22:31,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:22:31,729 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-23 05:22:31,733 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-23 05:22:31,733 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-23 05:22:31,739 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-23 05:22:31,745 [ scc.git] DEBUG Already up to date. 2024-04-23 05:22:31,745 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2024-04-23 05:22:32,162 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-04-23 05:22:32,162 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2024-04-23 05:22:32,170 [ scc.git] DEBUG Calling 'git fetch origin pull/23/head' 2024-04-23 05:22:32,559 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-04-23 05:22:32,560 [ scc.git] DEBUG * branch refs/pull/23/head -> FETCH_HEAD 2024-04-23 05:22:32,570 [ scc.git] DEBUG ## Unique users: [] 2024-04-23 05:22:32,570 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:22:32,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:22:32,583 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-04-23 05:22:32,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:22:32,599 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-04-23 05:22:32,670 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:22:32,675 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2024-04-23 05:22:32,675 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2024-04-23 05:22:32,675 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2024-04-23 05:22:32,675 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2024-04-23 05:22:32,675 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2024-04-23 05:22:32,675 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2024-04-23 05:22:32,675 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2024-04-23 05:22:32,675 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2024-04-23 05:22:32,677 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2024-04-23 05:22:32,677 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2024-04-23 05:22:32,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:22:32,847 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8' 2024-04-23 05:22:32,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:22:32,863 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 23 (Remove python-future compatibility code) 9be465b316e0bf0fbbf1b55a89b4dc9d7ecbfab8' 2024-04-23 05:22:32,963 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2024-04-23 05:22:32,963 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2024-04-23 05:22:32,963 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2024-04-23 05:22:32,963 [ scc.git] DEBUG Auto-merging src/fsLists.py 2024-04-23 05:22:32,963 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2024-04-23 05:22:32,963 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2024-04-23 05:22:32,963 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2024-04-23 05:22:32,963 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2024-04-23 05:22:32,963 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2024-04-23 05:22:32,964 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:22:32,970 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-04-23 05:22:32,970 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 6 +++-- 2024-04-23 05:22:32,970 [ scc.git] DEBUG .github/workflows/tox.yml | 5 ++-- 2024-04-23 05:22:32,971 [ scc.git] DEBUG Dockerfile | 32 ---------------------- 2024-04-23 05:22:32,971 [ scc.git] DEBUG setup.py | 2 +- 2024-04-23 05:22:32,971 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 1 - 2024-04-23 05:22:32,971 [ scc.git] DEBUG src/fsDirectory.py | 8 +----- 2024-04-23 05:22:32,971 [ scc.git] DEBUG src/fsDropBox.py | 8 +----- 2024-04-23 05:22:32,971 [ scc.git] DEBUG src/fsDropBoxMonitorClient.py | 11 +------- 2024-04-23 05:22:32,971 [ scc.git] DEBUG src/fsFileServer.py | 12 ++------- 2024-04-23 05:22:32,971 [ scc.git] DEBUG src/fsLists.py | 2 -- 2024-04-23 05:22:32,971 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 9 +------ 2024-04-23 05:22:32,971 [ scc.git] DEBUG src/fsMonitor.py | 2 -- 2024-04-23 05:22:32,971 [ scc.git] DEBUG src/fsMonitorServer.py | 8 +++--- 2024-04-23 05:22:32,971 [ scc.git] DEBUG src/fsNotificationScheduler.py | 3 --- 2024-04-23 05:22:32,971 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 21 +++++---------- 2024-04-23 05:22:32,971 [ scc.git] DEBUG src/fsUtil.py | 9 +++---- 2024-04-23 05:22:32,971 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 8 +----- 2024-04-23 05:22:32,971 [ scc.git] DEBUG test/conftest.py | 2 -- 2024-04-23 05:22:32,971 [ scc.git] DEBUG test/drivers.py | 17 +++--------- 2024-04-23 05:22:32,971 [ scc.git] DEBUG test/unit/test_drivers.py | 55 ++++++++++++++++---------------------- 2024-04-23 05:22:32,971 [ scc.git] DEBUG test/unit/test_monitor.py | 2 -- 2024-04-23 05:22:32,971 [ scc.git] DEBUG test/unit/test_replay.py | 8 +----- 2024-04-23 05:22:32,971 [ scc.git] DEBUG test/unit/test_state.py | 1 - 2024-04-23 05:22:32,972 [ scc.git] DEBUG tox.ini | 3 ++- 2024-04-23 05:22:32,972 [ scc.git] DEBUG 25 files changed, 59 insertions(+), 178 deletions(-) 2024-04-23 05:22:32,972 [ scc.git] DEBUG delete mode 100644 Dockerfile 2024-04-23 05:22:33,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:22:33,259 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-23 05:22:33,328 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:22:33,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:22:33,335 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-23 05:22:33,396 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-23 05:22:33,408 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fed85b5f3d0> has no local changes 2024-04-23 05:22:33,409 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 23 sbesson 'Remove python-future compatibility code' Generated by OMERO-python-superbuild-push#40 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/40/)' 2024-04-23 05:22:33,424 [ scc.git] DEBUG [detached HEAD ead267c] merge master -Dorg -Ssuccess-only 2024-04-23 05:22:33,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-04-23 05:22:33,425 [ scc.repo] DEBUG ## PRs found: 2024-04-23 05:22:33,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2024-04-23 05:22:34,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2024-04-23 05:22:34,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2024-04-23 05:22:35,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-04-23 05:22:35,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:22:36,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:22:36,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-04-23 05:22:37,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2024-04-23 05:22:37,168 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2024-04-23 05:22:37,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2024-04-23 05:22:38,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2024-04-23 05:22:38,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2024-04-23 05:22:39,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2024-04-23 05:22:39,004 [ scc.repo] DEBUG ## Branches found: 2024-04-23 05:22:39,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-04-23 05:22:39,004 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:22:39,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:22:39,011 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-23 05:22:39,016 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-23 05:22:39,017 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-23 05:22:39,023 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-23 05:22:39,030 [ scc.git] DEBUG Already up to date. 2024-04-23 05:22:39,030 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2024-04-23 05:22:39,445 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-04-23 05:22:39,445 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2024-04-23 05:22:39,451 [ scc.git] DEBUG ## Unique users: [] 2024-04-23 05:22:39,451 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:22:39,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:22:39,457 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-04-23 05:22:39,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:22:39,469 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-04-23 05:22:39,497 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2024-04-23 05:22:39,499 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:22:39,503 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2024-04-23 05:22:39,503 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2024-04-23 05:22:39,503 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2024-04-23 05:22:39,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:22:39,661 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-23 05:22:39,705 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:22:39,705 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:22:39,711 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-23 05:22:39,754 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-23 05:22:39,761 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fed85af7f10> has no local changes 2024-04-23 05:22:39,761 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#40 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/40/)' 2024-04-23 05:22:39,771 [ scc.git] DEBUG [detached HEAD 717ab13] merge master -Dorg -Ssuccess-only 2024-04-23 05:22:39,771 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-04-23 05:22:39,771 [ scc.repo] DEBUG ## PRs found: 2024-04-23 05:22:40,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2024-04-23 05:22:40,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/406 HTTP/1.1" 200 None 2024-04-23 05:22:41,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57b2e1a6ad6430cacb432f0a392f0f95072f691b HTTP/1.1" 200 None 2024-04-23 05:22:41,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57b2e1a6ad6430cacb432f0a392f0f95072f691b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:22:42,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57b2e1a6ad6430cacb432f0a392f0f95072f691b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:22:42,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57b2e1a6ad6430cacb432f0a392f0f95072f691b HTTP/1.1" 200 None 2024-04-23 05:22:43,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/57b2e1a6ad6430cacb432f0a392f0f95072f691b?per_page=1 HTTP/1.1" 200 None 2024-04-23 05:22:43,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57b2e1a6ad6430cacb432f0a392f0f95072f691b HTTP/1.1" 200 None 2024-04-23 05:22:44,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57b2e1a6ad6430cacb432f0a392f0f95072f691b/status HTTP/1.1" 200 None 2024-04-23 05:22:44,119 [ scc.repo] DEBUG - PR 406 jburel 'update the build steps' 2024-04-23 05:22:44,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/405 HTTP/1.1" 200 None 2024-04-23 05:22:45,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/405/comments HTTP/1.1" 200 None 2024-04-23 05:22:45,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5ad53ebee1b529384752bd13b853b45d14484e4c HTTP/1.1" 200 None 2024-04-23 05:22:46,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5ad53ebee1b529384752bd13b853b45d14484e4c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:22:46,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5ad53ebee1b529384752bd13b853b45d14484e4c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:22:46,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5ad53ebee1b529384752bd13b853b45d14484e4c HTTP/1.1" 200 None 2024-04-23 05:22:47,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5ad53ebee1b529384752bd13b853b45d14484e4c?per_page=1 HTTP/1.1" 200 None 2024-04-23 05:22:47,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5ad53ebee1b529384752bd13b853b45d14484e4c HTTP/1.1" 200 None 2024-04-23 05:22:48,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5ad53ebee1b529384752bd13b853b45d14484e4c/status HTTP/1.1" 200 None 2024-04-23 05:22:48,269 [ scc.repo] DEBUG - PR 405 will-moore 'FilesetWrapper lazy loads Images and UsedFiles' 2024-04-23 05:22:48,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/400 HTTP/1.1" 200 None 2024-04-23 05:22:49,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/400/comments HTTP/1.1" 200 None 2024-04-23 05:22:49,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/64bf1f9dfd9553a639094f9a6b232218e92d690b HTTP/1.1" 200 None 2024-04-23 05:22:50,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/64bf1f9dfd9553a639094f9a6b232218e92d690b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:22:50,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/64bf1f9dfd9553a639094f9a6b232218e92d690b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:22:51,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/64bf1f9dfd9553a639094f9a6b232218e92d690b HTTP/1.1" 200 None 2024-04-23 05:22:51,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/64bf1f9dfd9553a639094f9a6b232218e92d690b?per_page=1 HTTP/1.1" 200 None 2024-04-23 05:22:52,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/64bf1f9dfd9553a639094f9a6b232218e92d690b HTTP/1.1" 200 None 2024-04-23 05:22:52,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/64bf1f9dfd9553a639094f9a6b232218e92d690b/status HTTP/1.1" 200 None 2024-04-23 05:22:52,583 [ scc.repo] DEBUG - PR 400 jburel 'Session ID and constructor' 2024-04-23 05:22:53,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/398 HTTP/1.1" 200 None 2024-04-23 05:22:53,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3 HTTP/1.1" 200 None 2024-04-23 05:22:54,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:22:54,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:22:54,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3 HTTP/1.1" 200 None 2024-04-23 05:22:55,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/bbf54d740f70baee1e5fd5d3fb396699af5095b3?per_page=1 HTTP/1.1" 200 None 2024-04-23 05:22:55,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3 HTTP/1.1" 200 None 2024-04-23 05:22:56,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/bbf54d740f70baee1e5fd5d3fb396699af5095b3/status HTTP/1.1" 200 None 2024-04-23 05:22:56,221 [ scc.repo] DEBUG - PR 398 will-moore 'getGridSize() handles plates with no Wells' 2024-04-23 05:22:56,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2024-04-23 05:22:57,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2024-04-23 05:22:57,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2024-04-23 05:22:58,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:22:58,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:22:59,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/394 HTTP/1.1" 200 None 2024-04-23 05:22:59,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/394/comments HTTP/1.1" 200 None 2024-04-23 05:23:00,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2024-04-23 05:23:00,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-04-23 05:23:01,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:01,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:23:02,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-04-23 05:23:02,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:02,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-04-23 05:23:03,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2024-04-23 05:23:03,315 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2024-04-23 05:23:03,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2024-04-23 05:23:03,767 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-04-23 05:23:04,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None 2024-04-23 05:23:04,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None 2024-04-23 05:23:05,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2024-04-23 05:23:05,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2024-04-23 05:23:06,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-04-23 05:23:06,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:07,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-04-23 05:23:07,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2024-04-23 05:23:07,456 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-04-23 05:23:07,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2024-04-23 05:23:08,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2024-04-23 05:23:08,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-04-23 05:23:09,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:09,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:23:10,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-04-23 05:23:10,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:11,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-04-23 05:23:11,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2024-04-23 05:23:11,606 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2024-04-23 05:23:12,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2024-04-23 05:23:12,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2024-04-23 05:23:13,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2024-04-23 05:23:13,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2024-04-23 05:23:13,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-04-23 05:23:14,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:14,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-04-23 05:23:15,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2024-04-23 05:23:15,319 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2024-04-23 05:23:15,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2024-04-23 05:23:16,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-04-23 05:23:16,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:17,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-04-23 05:23:17,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2024-04-23 05:23:17,619 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-04-23 05:23:18,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2024-04-23 05:23:18,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2024-04-23 05:23:19,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-04-23 05:23:19,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:19,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-04-23 05:23:20,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2024-04-23 05:23:20,390 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2024-04-23 05:23:20,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2024-04-23 05:23:21,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2024-04-23 05:23:21,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-04-23 05:23:22,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:22,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-04-23 05:23:23,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2024-04-23 05:23:23,170 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2024-04-23 05:23:23,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2024-04-23 05:23:24,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2024-04-23 05:23:24,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2024-04-23 05:23:25,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2024-04-23 05:23:25,033 [ scc.repo] DEBUG ## Branches found: 2024-04-23 05:23:25,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-04-23 05:23:25,034 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:23:25,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:25,039 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-23 05:23:25,044 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-23 05:23:25,044 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-23 05:23:25,049 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-23 05:23:25,055 [ scc.git] DEBUG Already up to date. 2024-04-23 05:23:25,055 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2024-04-23 05:23:25,591 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-04-23 05:23:25,592 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2024-04-23 05:23:25,596 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2024-04-23 05:23:26,001 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-04-23 05:23:26,001 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2024-04-23 05:23:26,006 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2024-04-23 05:23:26,466 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-04-23 05:23:26,466 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2024-04-23 05:23:26,471 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2024-04-23 05:23:26,912 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-04-23 05:23:26,912 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2024-04-23 05:23:26,918 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2024-04-23 05:23:27,384 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-04-23 05:23:27,384 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2024-04-23 05:23:27,397 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2024-04-23 05:23:27,788 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-04-23 05:23:27,789 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2024-04-23 05:23:27,797 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-04-23 05:23:28,188 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-04-23 05:23:28,188 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-04-23 05:23:28,193 [ scc.git] DEBUG Calling 'git fetch origin pull/398/head' 2024-04-23 05:23:28,700 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-04-23 05:23:28,700 [ scc.git] DEBUG * branch refs/pull/398/head -> FETCH_HEAD 2024-04-23 05:23:28,706 [ scc.git] DEBUG Calling 'git fetch origin pull/400/head' 2024-04-23 05:23:29,100 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-04-23 05:23:29,100 [ scc.git] DEBUG * branch refs/pull/400/head -> FETCH_HEAD 2024-04-23 05:23:29,106 [ scc.git] DEBUG Calling 'git fetch origin pull/405/head' 2024-04-23 05:23:29,726 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-04-23 05:23:29,726 [ scc.git] DEBUG * branch refs/pull/405/head -> FETCH_HEAD 2024-04-23 05:23:29,731 [ scc.git] DEBUG Calling 'git fetch origin pull/406/head' 2024-04-23 05:23:30,169 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-04-23 05:23:30,169 [ scc.git] DEBUG * branch refs/pull/406/head -> FETCH_HEAD 2024-04-23 05:23:30,173 [ scc.git] DEBUG ## Unique users: [] 2024-04-23 05:23:30,173 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:23:30,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:30,178 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-04-23 05:23:30,187 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:30,191 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-04-23 05:23:30,261 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2024-04-23 05:23:30,262 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2024-04-23 05:23:30,262 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:23:30,267 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2024-04-23 05:23:30,267 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2024-04-23 05:23:30,267 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2024-04-23 05:23:30,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:23:30,431 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-04-23 05:23:30,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:30,446 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-04-23 05:23:30,582 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-04-23 05:23:30,583 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2024-04-23 05:23:30,583 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:23:30,589 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2024-04-23 05:23:30,589 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2024-04-23 05:23:30,589 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2024-04-23 05:23:30,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:23:30,845 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-04-23 05:23:30,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:30,859 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-04-23 05:23:30,889 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2024-04-23 05:23:30,890 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:23:30,893 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2024-04-23 05:23:30,893 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2024-04-23 05:23:31,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:23:31,279 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2024-04-23 05:23:31,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:31,293 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2024-04-23 05:23:31,329 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2024-04-23 05:23:31,329 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2024-04-23 05:23:31,330 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:23:31,333 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2024-04-23 05:23:31,333 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2024-04-23 05:23:31,333 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2024-04-23 05:23:31,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:23:31,692 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-04-23 05:23:31,703 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:31,707 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-04-23 05:23:31,739 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:23:31,742 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2024-04-23 05:23:31,742 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2024-04-23 05:23:31,742 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2024-04-23 05:23:31,742 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2024-04-23 05:23:31,742 [ scc.git] DEBUG create mode 100644 connect.py 2024-04-23 05:23:32,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:23:32,097 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-04-23 05:23:32,107 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:32,112 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-04-23 05:23:32,165 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2024-04-23 05:23:32,179 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:23:32,182 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2024-04-23 05:23:32,182 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-04-23 05:23:32,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:23:32,503 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2024-04-23 05:23:32,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:32,517 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2024-04-23 05:23:32,562 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-04-23 05:23:32,563 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:23:32,567 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2024-04-23 05:23:32,567 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2024-04-23 05:23:32,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:23:32,922 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bbf54d740f70baee1e5fd5d3fb396699af5095b3' 2024-04-23 05:23:32,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:32,936 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 398 (getGridSize() handles plates with no Wells) bbf54d740f70baee1e5fd5d3fb396699af5095b3' 2024-04-23 05:23:33,031 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-04-23 05:23:33,032 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:23:33,039 [ scc.git] DEBUG src/omero/gateway/__init__.py | 6 +++++- 2024-04-23 05:23:33,039 [ scc.git] DEBUG 1 file changed, 5 insertions(+), 1 deletion(-) 2024-04-23 05:23:33,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:23:33,331 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64bf1f9dfd9553a639094f9a6b232218e92d690b' 2024-04-23 05:23:33,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:33,346 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 400 (Session ID and constructor) 64bf1f9dfd9553a639094f9a6b232218e92d690b' 2024-04-23 05:23:33,457 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-04-23 05:23:33,457 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:23:33,465 [ scc.git] DEBUG src/omero/gateway/__init__.py | 50 +++++++++++++++++++++++++++++++--- 2024-04-23 05:23:33,465 [ scc.git] DEBUG src/omero/gateway/scripts/dbhelpers.py | 3 +- 2024-04-23 05:23:33,465 [ scc.git] DEBUG 2 files changed, 48 insertions(+), 5 deletions(-) 2024-04-23 05:23:33,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:23:33,742 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5ad53ebee1b529384752bd13b853b45d14484e4c' 2024-04-23 05:23:33,755 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:33,760 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 405 (FilesetWrapper lazy loads Images and UsedFiles) 5ad53ebee1b529384752bd13b853b45d14484e4c' 2024-04-23 05:23:33,868 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-04-23 05:23:33,869 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:23:33,877 [ scc.git] DEBUG src/omero/gateway/__init__.py | 41 +++++++++++++++++++++++++---------------- 2024-04-23 05:23:33,877 [ scc.git] DEBUG 1 file changed, 25 insertions(+), 16 deletions(-) 2024-04-23 05:23:34,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:23:34,157 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...57b2e1a6ad6430cacb432f0a392f0f95072f691b' 2024-04-23 05:23:34,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:34,173 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 406 (update the build steps) 57b2e1a6ad6430cacb432f0a392f0f95072f691b' 2024-04-23 05:23:34,203 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:23:34,205 [ scc.git] DEBUG .github/workflows/workflow.yml | 6 +++--- 2024-04-23 05:23:34,205 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2024-04-23 05:23:34,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:23:34,558 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-23 05:23:34,598 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:23:34,598 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:34,602 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-23 05:23:34,652 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-23 05:23:34,660 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fed84a9a8b0> has no local changes 2024-04-23 05:23:34,661 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 394 jo-mueller 'added `_repr_html_` method for `_ImageWrapper`' (user: jo-mueller) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 398 will-moore 'getGridSize() handles plates with no Wells' - PR 400 jburel 'Session ID and constructor' - PR 405 will-moore 'FilesetWrapper lazy loads Images and UsedFiles' - PR 406 jburel 'update the build steps' Generated by OMERO-python-superbuild-push#40 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/40/)' 2024-04-23 05:23:34,671 [ scc.git] DEBUG [detached HEAD 995de586] merge master -Dorg -Ssuccess-only 2024-04-23 05:23:34,672 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-04-23 05:23:34,672 [ scc.git] INFO Overriding base-branch from master to develop 2024-04-23 05:23:34,672 [ scc.repo] DEBUG ## PRs found: 2024-04-23 05:23:35,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-04-23 05:23:35,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-04-23 05:23:36,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-04-23 05:23:36,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-04-23 05:23:37,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-04-23 05:23:37,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-04-23 05:23:38,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-04-23 05:23:38,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-04-23 05:23:38,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:39,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-04-23 05:23:39,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-04-23 05:23:39,828 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-04-23 05:23:40,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-04-23 05:23:40,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-04-23 05:23:41,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-04-23 05:23:41,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-04-23 05:23:41,783 [ scc.repo] DEBUG ## Branches found: 2024-04-23 05:23:41,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-04-23 05:23:41,783 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:23:41,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:41,789 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-04-23 05:23:41,794 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-23 05:23:41,794 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-04-23 05:23:41,800 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-04-23 05:23:41,805 [ scc.git] DEBUG Already up to date. 2024-04-23 05:23:41,806 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-04-23 05:23:42,227 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-04-23 05:23:42,227 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-04-23 05:23:42,232 [ scc.git] DEBUG ## Unique users: [] 2024-04-23 05:23:42,232 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:23:42,232 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:42,238 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-23 05:23:42,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:42,249 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-23 05:23:42,305 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-04-23 05:23:42,305 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-04-23 05:23:42,305 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-23 05:23:42,305 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-23 05:23:42,311 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a' 2024-04-23 05:23:42,317 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-04-23 05:23:42,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:23:42,473 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-23 05:23:42,480 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a' 2024-04-23 05:23:42,485 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#40](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/40/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/40/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-04-23 05:23:42,490 [ scc.config] DEBUG Found github.token 2024-04-23 05:23:42,490 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-04-23 05:23:42,490 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-23 05:23:42,533 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:23:42,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:23:42,539 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-23 05:23:42,582 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-23 05:23:42,588 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fed84a81640> has no local changes 2024-04-23 05:23:42,588 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#40 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/40/)' 2024-04-23 05:23:42,597 [ scc.git] DEBUG [detached HEAD dee1964] merge master -Dorg -Ssuccess-only 2024-04-23 05:23:42,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-04-23 05:23:42,598 [ scc.repo] DEBUG ## PRs found: 2024-04-23 05:23:43,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2024-04-23 05:23:43,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/549 HTTP/1.1" 200 None 2024-04-23 05:23:44,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/549/comments HTTP/1.1" 200 None 2024-04-23 05:23:44,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ade7fa1b5839e9b17878c38efd4f6404a5857712 HTTP/1.1" 200 None 2024-04-23 05:23:44,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ade7fa1b5839e9b17878c38efd4f6404a5857712/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:45,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ade7fa1b5839e9b17878c38efd4f6404a5857712/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:23:45,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/543 HTTP/1.1" 200 None 2024-04-23 05:23:46,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/543/comments HTTP/1.1" 200 None 2024-04-23 05:23:46,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4 HTTP/1.1" 200 None 2024-04-23 05:23:47,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:47,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:23:48,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4 HTTP/1.1" 200 None 2024-04-23 05:23:48,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4?per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:49,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4 HTTP/1.1" 200 None 2024-04-23 05:23:49,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4/status HTTP/1.1" 200 None 2024-04-23 05:23:49,689 [ scc.repo] DEBUG - PR 543 knabar 'Block UI for some long running tasks' 2024-04-23 05:23:50,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/542 HTTP/1.1" 200 None 2024-04-23 05:23:50,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/542/comments HTTP/1.1" 200 None 2024-04-23 05:23:50,636 [ scc.repo] DEBUG # ... Include label: include 2024-04-23 05:23:51,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2 HTTP/1.1" 200 None 2024-04-23 05:23:51,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:52,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:23:52,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2 HTTP/1.1" 200 None 2024-04-23 05:23:52,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/977f7b65169e6dee479197a9156993bbadd2d2e2?per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:53,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2 HTTP/1.1" 200 None 2024-04-23 05:23:53,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/977f7b65169e6dee479197a9156993bbadd2d2e2/status HTTP/1.1" 200 None 2024-04-23 05:23:53,863 [ scc.repo] DEBUG - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' 2024-04-23 05:23:54,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/540 HTTP/1.1" 200 None 2024-04-23 05:23:54,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30 HTTP/1.1" 200 None 2024-04-23 05:23:55,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:55,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:23:56,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30 HTTP/1.1" 200 None 2024-04-23 05:23:56,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/ee785db51c334b1be62c14ab36414993a2319a30?per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:57,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30 HTTP/1.1" 200 None 2024-04-23 05:23:57,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30/status HTTP/1.1" 200 None 2024-04-23 05:23:57,532 [ scc.repo] DEBUG - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES' 2024-04-23 05:23:57,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/536 HTTP/1.1" 200 None 2024-04-23 05:23:58,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/536/comments HTTP/1.1" 200 None 2024-04-23 05:23:59,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/412fa66a52477fb77319a35147313a6f3cf481a2 HTTP/1.1" 200 None 2024-04-23 05:23:59,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/412fa66a52477fb77319a35147313a6f3cf481a2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:23:59,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/412fa66a52477fb77319a35147313a6f3cf481a2/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:24:00,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/412fa66a52477fb77319a35147313a6f3cf481a2 HTTP/1.1" 200 None 2024-04-23 05:24:00,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/412fa66a52477fb77319a35147313a6f3cf481a2?per_page=1 HTTP/1.1" 200 None 2024-04-23 05:24:01,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/412fa66a52477fb77319a35147313a6f3cf481a2 HTTP/1.1" 200 None 2024-04-23 05:24:01,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/412fa66a52477fb77319a35147313a6f3cf481a2/status HTTP/1.1" 200 None 2024-04-23 05:24:01,772 [ scc.repo] DEBUG - PR 536 will-moore 'imgData JSON with no stateful services' 2024-04-23 05:24:02,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2024-04-23 05:24:02,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2024-04-23 05:24:03,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2024-04-23 05:24:03,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-04-23 05:24:04,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:24:04,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:24:05,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-04-23 05:24:05,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2024-04-23 05:24:06,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-04-23 05:24:06,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2024-04-23 05:24:06,541 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-04-23 05:24:06,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/533 HTTP/1.1" 200 None 2024-04-23 05:24:07,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545 HTTP/1.1" 200 None 2024-04-23 05:24:07,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:24:08,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:24:08,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545 HTTP/1.1" 200 None 2024-04-23 05:24:09,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/e335980be1e7197826687f6c322a60c61b4aa545?per_page=1 HTTP/1.1" 200 None 2024-04-23 05:24:09,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545 HTTP/1.1" 200 None 2024-04-23 05:24:10,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545/status HTTP/1.1" 200 None 2024-04-23 05:24:10,232 [ scc.repo] DEBUG - PR 533 jburel 'use conda-forge channel' 2024-04-23 05:24:10,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2024-04-23 05:24:11,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2024-04-23 05:24:11,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-04-23 05:24:12,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:24:12,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-23 05:24:13,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-04-23 05:24:13,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2024-04-23 05:24:13,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-04-23 05:24:14,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2024-04-23 05:24:14,360 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2024-04-23 05:24:14,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2024-04-23 05:24:15,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2024-04-23 05:24:15,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/219d9e721304a4c46b4d73ef9ff3777549d69615 HTTP/1.1" 200 None 2024-04-23 05:24:16,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/219d9e721304a4c46b4d73ef9ff3777549d69615/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-23 05:24:16,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/219d9e721304a4c46b4d73ef9ff3777549d69615 HTTP/1.1" 200 None 2024-04-23 05:24:17,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/219d9e721304a4c46b4d73ef9ff3777549d69615?per_page=1 HTTP/1.1" 200 2 2024-04-23 05:24:17,145 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler' 2024-04-23 05:24:17,146 [ scc.repo] DEBUG ## Branches found: 2024-04-23 05:24:17,146 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-04-23 05:24:17,146 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:24:17,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:24:17,151 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-23 05:24:17,157 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-23 05:24:17,157 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-23 05:24:17,163 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-23 05:24:17,170 [ scc.git] DEBUG Already up to date. 2024-04-23 05:24:17,171 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head' 2024-04-23 05:24:17,788 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-04-23 05:24:17,788 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD 2024-04-23 05:24:17,793 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2024-04-23 05:24:18,262 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-04-23 05:24:18,263 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2024-04-23 05:24:18,268 [ scc.git] DEBUG Calling 'git fetch origin pull/533/head' 2024-04-23 05:24:18,658 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-04-23 05:24:18,658 [ scc.git] DEBUG * branch refs/pull/533/head -> FETCH_HEAD 2024-04-23 05:24:18,664 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2024-04-23 05:24:19,126 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-04-23 05:24:19,127 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2024-04-23 05:24:19,133 [ scc.git] DEBUG Calling 'git fetch origin pull/536/head' 2024-04-23 05:24:19,917 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-04-23 05:24:19,917 [ scc.git] DEBUG * branch refs/pull/536/head -> FETCH_HEAD 2024-04-23 05:24:19,923 [ scc.git] DEBUG Calling 'git fetch origin pull/540/head' 2024-04-23 05:24:20,309 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-04-23 05:24:20,309 [ scc.git] DEBUG * branch refs/pull/540/head -> FETCH_HEAD 2024-04-23 05:24:20,316 [ scc.git] DEBUG Calling 'git fetch origin pull/542/head' 2024-04-23 05:24:20,993 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-04-23 05:24:20,993 [ scc.git] DEBUG * branch refs/pull/542/head -> FETCH_HEAD 2024-04-23 05:24:20,998 [ scc.git] DEBUG Calling 'git fetch origin pull/543/head' 2024-04-23 05:24:21,910 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-04-23 05:24:21,910 [ scc.git] DEBUG * branch refs/pull/543/head -> FETCH_HEAD 2024-04-23 05:24:21,913 [ scc.git] DEBUG ## Unique users: [] 2024-04-23 05:24:21,913 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:24:21,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:24:21,919 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...219d9e721304a4c46b4d73ef9ff3777549d69615' 2024-04-23 05:24:21,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:24:21,938 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 219d9e721304a4c46b4d73ef9ff3777549d69615' 2024-04-23 05:24:22,108 [ scc.git] DEBUG Auto-merging test/unit/test_web.py 2024-04-23 05:24:22,108 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/unit/test_web.py 2024-04-23 05:24:22,109 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-23 05:24:22,109 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-23 05:24:22,116 [ scc.git] DEBUG Calling 'git reset --hard 02bd670ca7628ecb293108f394ef062a66a7beb4' 2024-04-23 05:24:22,126 [ scc.git] DEBUG HEAD is now at 02bd670ca Merge pull request #551 from ome/pre-commit-ci-update-config 2024-04-23 05:24:22,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:24:22,284 [ scc.git] DEBUG Calling 'git merge-base 02bd670ca7628ecb293108f394ef062a66a7beb4 219d9e721304a4c46b4d73ef9ff3777549d69615' 2024-04-23 05:24:22,299 [ scc.git] DEBUG Calling 'git diff --name-only 632d14a9cab5319c6b1bd9190d441a95e457103b..02bd670ca7628ecb293108f394ef062a66a7beb4' 2024-04-23 05:24:22,396 [ scc.git] INFO - PR 168 stick 'Changes to nginx @maintenance handler' Conflicting PR. Removed from build [OMERO-python-superbuild-push#40](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/40/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/40/consoleText) for more details. Possible conflicts: - Upstream changes - test/unit/test_web.py --conflicts 2024-04-23 05:24:22,402 [ scc.config] DEBUG Found github.token 2024-04-23 05:24:22,402 [ scc.git] DEBUG Not adding comment to issue #168, already --conflicts. 2024-04-23 05:24:22,402 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-04-23 05:24:22,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:24:22,412 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-04-23 05:24:22,459 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-04-23 05:24:22,459 [ scc.git] DEBUG Auto-merging setup.py 2024-04-23 05:24:22,462 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:24:22,465 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2024-04-23 05:24:22,465 [ scc.git] DEBUG setup.py | 1 + 2024-04-23 05:24:22,465 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2024-04-23 05:24:22,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:24:22,688 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e335980be1e7197826687f6c322a60c61b4aa545' 2024-04-23 05:24:22,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:24:22,699 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 533 (use conda-forge channel) e335980be1e7197826687f6c322a60c61b4aa545' 2024-04-23 05:24:22,718 [ scc.git] DEBUG Auto-merging README.rst 2024-04-23 05:24:22,719 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:24:22,722 [ scc.git] DEBUG README.rst | 3 +-- 2024-04-23 05:24:22,722 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 2 deletions(-) 2024-04-23 05:24:23,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:24:23,087 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-04-23 05:24:23,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:24:23,099 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-04-23 05:24:23,154 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2024-04-23 05:24:23,154 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-04-23 05:24:23,155 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:24:23,159 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2024-04-23 05:24:23,159 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2024-04-23 05:24:23,159 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2024-04-23 05:24:23,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:24:23,498 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...412fa66a52477fb77319a35147313a6f3cf481a2' 2024-04-23 05:24:23,506 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:24:23,511 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 536 (imgData JSON with no stateful services) 412fa66a52477fb77319a35147313a6f3cf481a2' 2024-04-23 05:24:23,592 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2024-04-23 05:24:23,592 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-04-23 05:24:23,618 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:24:23,623 [ scc.git] DEBUG omeroweb/webclient/views.py | 4 +- 2024-04-23 05:24:23,624 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 135 ++++++++++++++++++++++++++++++++++++++--- 2024-04-23 05:24:23,624 [ scc.git] DEBUG omeroweb/webgateway/util.py | 38 ++++++++++++ 2024-04-23 05:24:23,624 [ scc.git] DEBUG 3 files changed, 166 insertions(+), 11 deletions(-) 2024-04-23 05:24:23,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:24:23,902 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ee785db51c334b1be62c14ab36414993a2319a30' 2024-04-23 05:24:23,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:24:23,914 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 540 (Add 'django.template.context_processors.request' to TEMPLATES) ee785db51c334b1be62c14ab36414993a2319a30' 2024-04-23 05:24:23,958 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-04-23 05:24:23,959 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:24:23,963 [ scc.git] DEBUG omeroweb/settings.py | 1 + 2024-04-23 05:24:23,963 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2024-04-23 05:24:24,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:24:24,303 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...977f7b65169e6dee479197a9156993bbadd2d2e2' 2024-04-23 05:24:24,311 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:24:24,317 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 542 (PlateAcquisition filtering with plate display) 977f7b65169e6dee479197a9156993bbadd2d2e2' 2024-04-23 05:24:24,370 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2024-04-23 05:24:24,371 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:24:24,381 [ scc.git] DEBUG .../data/includes/center_plugin.thumbs.js.html | 13 +++------- 2024-04-23 05:24:24,381 [ scc.git] DEBUG .../webclient/templates/webclient/data/plate.html | 10 ++++---- 2024-04-23 05:24:24,381 [ scc.git] DEBUG omeroweb/webclient/views.py | 17 ++++++++++++ 2024-04-23 05:24:24,381 [ scc.git] DEBUG omeroweb/webgateway/plategrid.py | 30 +++++++++++++++++++--- 2024-04-23 05:24:24,381 [ scc.git] DEBUG .../static/webgateway/js/ome.plateview.js | 16 +++++++----- 2024-04-23 05:24:24,381 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 2 +- 2024-04-23 05:24:24,382 [ scc.git] DEBUG omeroweb/webgateway/views.py | 16 ++++++++++-- 2024-04-23 05:24:24,382 [ scc.git] DEBUG 7 files changed, 78 insertions(+), 26 deletions(-) 2024-04-23 05:24:24,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:24:24,712 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4' 2024-04-23 05:24:24,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:24:24,726 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 543 (Block UI for some long running tasks) 8481f4cb5c44e8f8ba676e6fcb6bd9f83419eea4' 2024-04-23 05:24:24,789 [ scc.git] DEBUG Auto-merging omeroweb/webclient/templates/webclient/data/includes/center_plugin.thumbs.js.html 2024-04-23 05:24:24,791 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-23 05:24:24,797 [ scc.git] DEBUG .../webclient/javascript/ome.progress_overlay.js | 60 ++++++ 2024-04-23 05:24:24,797 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 112 +++++++----- 2024-04-23 05:24:24,797 [ scc.git] DEBUG .../webclient/annotations/metadata_preview.html | 51 +++--- 2024-04-23 05:24:24,797 [ scc.git] DEBUG .../webclient/templates/webclient/base/base.html | 1 + 2024-04-23 05:24:24,798 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 +- 2024-04-23 05:24:24,798 [ scc.git] DEBUG .../data/includes/center_plugin.thumbs.js.html | 16 +- 2024-04-23 05:24:24,798 [ scc.git] DEBUG .../static/webgateway/js/ome.gs_utils.js | 201 --------------------- 2024-04-23 05:24:24,798 [ scc.git] DEBUG .../webgateway/static/webgateway/js/ome.popup.js | 1 - 2024-04-23 05:24:24,798 [ scc.git] DEBUG .../webgateway/static/webgateway/js/omero_image.js | 35 ++-- 2024-04-23 05:24:24,798 [ scc.git] DEBUG 9 files changed, 186 insertions(+), 293 deletions(-) 2024-04-23 05:24:24,798 [ scc.git] DEBUG create mode 100644 omeroweb/webclient/static/webclient/javascript/ome.progress_overlay.js 2024-04-23 05:24:25,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:24:25,122 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-23 05:24:25,161 [ scc.git] DEBUG Get sha1 of %s 2024-04-23 05:24:25,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-23 05:24:25,165 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-23 05:24:25,204 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-23 05:24:25,217 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fed84aad910> has no local changes 2024-04-23 05:24:25,217 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 549 knabar 'Remove webgateway cache' (status: failure) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 533 jburel 'use conda-forge channel' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 536 will-moore 'imgData JSON with no stateful services' - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES' - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' - PR 543 knabar 'Block UI for some long running tasks' Conflicting PRs (not included): - PR 168 stick 'Changes to nginx @maintenance handler' Generated by OMERO-python-superbuild-push#40 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/40/)' 2024-04-23 05:24:25,229 [ scc.git] DEBUG [detached HEAD cf8263e49] merge master -Dorg -Ssuccess-only 2024-04-23 05:24:25,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-04-23 05:24:25,229 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-23 05:24:25,279 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2024-04-23 05:24:25,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:24:25,538 [ scc.config] DEBUG Found submodule.omero-marshal.url 2024-04-23 05:24:25,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:24:25,947 [ scc.config] DEBUG Found submodule.omero-py.url 2024-04-23 05:24:26,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:24:26,363 [ scc.config] DEBUG Found submodule.omero-scripts.url 2024-04-23 05:24:26,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:24:26,769 [ scc.config] DEBUG Found submodule.omero-web.url 2024-04-23 05:24:27,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-23 05:24:27,177 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-23 05:24:27,203 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fed85bf3e80> has local changes 2024-04-23 05:24:27,204 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 273 dependabot[bot] 'Bump omero-web from `0e4013c` to `02bd670`' - PR 274 dependabot[bot] 'Bump omero-py from `d76e17a` to `3eb47d1`' - PR 275 dependabot[bot] 'Bump omero-scripts from `2078ac7` to `5a90893`' Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 23 sbesson 'Remove python-future compatibility code' Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 394 jo-mueller 'added `_repr_html_` method for `_ImageWrapper`' (user: jo-mueller) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 398 will-moore 'getGridSize() handles plates with no Wells' - PR 400 jburel 'Session ID and constructor' - PR 405 will-moore 'FilesetWrapper lazy loads Images and UsedFiles' - PR 406 jburel 'update the build steps' Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 549 knabar 'Remove webgateway cache' (status: failure) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 533 jburel 'use conda-forge channel' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 536 will-moore 'imgData JSON with no stateful services' - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES' - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' - PR 543 knabar 'Block UI for some long running tasks' Conflicting PRs (not included): - PR 168 stick 'Changes to nginx @maintenance handler' Generated by OMERO-python-superbuild-push#40 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/40/)' 2024-04-23 05:24:27,213 [ scc.git] DEBUG [detached HEAD c18218b] merge master -Dorg -Ssuccess-only 2024-04-23 05:24:27,213 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-04-23 05:24:27,213 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2024-04-23 05:24:27,213 [ scc.merge] INFO Already up to date. 2024-04-23 05:24:27,213 [ scc.merge] INFO 2024-04-23 05:24:27,213 [ scc.merge] INFO Merged PRs: 2024-04-23 05:24:27,213 [ scc.merge] INFO - PR 273 dependabot[bot] 'Bump omero-web from `0e4013c` to `02bd670`' 2024-04-23 05:24:27,213 [ scc.merge] INFO - PR 274 dependabot[bot] 'Bump omero-py from `d76e17a` to `3eb47d1`' 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 275 dependabot[bot] 'Bump omero-scripts from `2078ac7` to `5a90893`' 2024-04-23 05:24:27,214 [ scc.merge] INFO 2024-04-23 05:24:27,214 [ scc.merge] INFO Repository: ome/omero-dropbox 2024-04-23 05:24:27,214 [ scc.merge] INFO Already up to date. 2024-04-23 05:24:27,214 [ scc.merge] INFO 2024-04-23 05:24:27,214 [ scc.merge] INFO Merged PRs: 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 23 sbesson 'Remove python-future compatibility code' 2024-04-23 05:24:27,214 [ scc.merge] INFO 2024-04-23 05:24:27,214 [ scc.merge] INFO Repository: ome/omero-marshal 2024-04-23 05:24:27,214 [ scc.merge] INFO Excluded PRs: 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2024-04-23 05:24:27,214 [ scc.merge] INFO Already up to date. 2024-04-23 05:24:27,214 [ scc.merge] INFO 2024-04-23 05:24:27,214 [ scc.merge] INFO Merged PRs: 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2024-04-23 05:24:27,214 [ scc.merge] INFO 2024-04-23 05:24:27,214 [ scc.merge] INFO Repository: ome/omero-py 2024-04-23 05:24:27,214 [ scc.merge] INFO Excluded PRs: 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 394 jo-mueller 'added `_repr_html_` method for `_ImageWrapper`' (user: jo-mueller) 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2024-04-23 05:24:27,214 [ scc.merge] INFO Already up to date. 2024-04-23 05:24:27,214 [ scc.merge] INFO 2024-04-23 05:24:27,214 [ scc.merge] INFO Merged PRs: 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2024-04-23 05:24:27,214 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 398 will-moore 'getGridSize() handles plates with no Wells' 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 400 jburel 'Session ID and constructor' 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 405 will-moore 'FilesetWrapper lazy loads Images and UsedFiles' 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 406 jburel 'update the build steps' 2024-04-23 05:24:27,215 [ scc.merge] INFO 2024-04-23 05:24:27,215 [ scc.merge] INFO Repository: ome/omero-scripts 2024-04-23 05:24:27,215 [ scc.merge] INFO Excluded PRs: 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-04-23 05:24:27,215 [ scc.merge] INFO Already up to date. 2024-04-23 05:24:27,215 [ scc.merge] INFO 2024-04-23 05:24:27,215 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-04-23 05:24:27,215 [ scc.merge] INFO 2024-04-23 05:24:27,215 [ scc.merge] INFO Repository: ome/omero-web 2024-04-23 05:24:27,215 [ scc.merge] INFO Excluded PRs: 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 549 knabar 'Remove webgateway cache' (status: failure) 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2024-04-23 05:24:27,215 [ scc.merge] INFO Already up to date. 2024-04-23 05:24:27,215 [ scc.merge] INFO 2024-04-23 05:24:27,215 [ scc.merge] INFO Merged PRs: 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 533 jburel 'use conda-forge channel' 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 536 will-moore 'imgData JSON with no stateful services' 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES' 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 543 knabar 'Block UI for some long running tasks' 2024-04-23 05:24:27,215 [ scc.merge] INFO 2024-04-23 05:24:27,215 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-23 05:24:27,215 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' 2024-04-23 05:24:27,216 [ scc.merge] INFO 2024-04-23 05:24:27,216 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-04-23 05:24:27,216 [ scc.git] DEBUG Calling 'git remote' 2024-04-23 05:24:27,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-04-23 05:24:27,221 [ scc.git] DEBUG Calling 'git remote' 2024-04-23 05:24:27,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-04-23 05:24:27,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-04-23 05:24:27,225 [ scc.git] DEBUG Calling 'git remote' 2024-04-23 05:24:27,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-04-23 05:24:27,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-04-23 05:24:27,230 [ scc.git] DEBUG Calling 'git remote' 2024-04-23 05:24:27,235 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-04-23 05:24:27,235 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-04-23 05:24:27,235 [ scc.git] DEBUG Calling 'git remote' 2024-04-23 05:24:27,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-04-23 05:24:27,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-04-23 05:24:27,240 [ scc.git] DEBUG Calling 'git remote' 2024-04-23 05:24:27,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 5863350 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from cca4c2f nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 3eb47d17 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 5a90893 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 02bd670ca nothing to commit, working tree clean HEAD detached from 2524209 nothing to commit, working tree clean 2024-04-23 05:24:57,685 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS