Started by upstream project "Trigger" build number 126 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision af267baf738bf563fa6d26d1f37a3717d679c59f The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/e9d96de4efbb3e39a2ce24824e54985c7c2760a6ed46c5415ea0aa1fd1e18d41/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision af267baf738bf563fa6d26d1f37a3717d679c59f (master) > git config core.sparsecheckout # timeout=10 > git checkout -f af267baf738bf563fa6d26d1f37a3717d679c59f # timeout=10 Commit message: "Merge pull request #19 from will-moore/readme" > git rev-list --no-walk af267baf738bf563fa6d26d1f37a3717d679c59f # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b68c3cf06205611a43f501104408df0df16649d6 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b68c3cf06205611a43f501104408df0df16649d6 # timeout=10 Commit message: "Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c" > git rev-list --no-walk b68c3cf06205611a43f501104408df0df16649d6 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 107 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.2.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.2.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.10.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.15.1-py3-none-any.whl.metadata (3.5 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-50.0.2-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.4 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.11-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.5.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (46 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.20-py3-none-any.whl.metadata (7.2 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.7.22-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.10.0-py3-none-any.whl (455 kB) Using cached pyjwt-2.15.1-py3-none-any.whl (33 kB) Using cached cryptography-50.0.2-cp311-abi3-manylinux_2_34_x86_64.whl (4.8 MB) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.5.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (269 kB) Using cached idna-3.20-py3-none-any.whl (69 kB) Using cached certifi-2026.7.22-py3-none-any.whl (136 kB) Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.11-py3-none-any.whl (51 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.10.0 PyYAML-6.0.3 certifi-2026.7.22 cffi-2.1.1 charset_normalizer-3.5.2 cryptography-50.0.2 future-1.0.0 idna-3.20 pycparser-3.11 pyjwt-2.15.1 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-10-11 23:21:40,831 [ scc.config] DEBUG Found github.token 2026-10-11 23:21:40,832 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-10-11 23:21:41,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:21:41,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:21:41,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-10-11 23:21:41,981 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 00:10 2026-10-11 23:21:41,982 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-10-11 23:21:41,993 [ scc.git] DEBUG Check current status 2026-10-11 23:21:41,993 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-11 23:21:42,013 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2026-10-11 23:21:42,014 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-11 23:21:42,170 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2026-10-11 23:21:42,226 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2026-10-11 23:21:42,348 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5) 2026-10-11 23:21:42,395 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2026-10-11 23:21:42,486 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2026-10-11 23:21:42,497 [ scc.config] DEBUG Found remote.origin.url 2026-10-11 23:21:42,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2026-10-11 23:21:43,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-10-11 23:21:43,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-10-11 23:21:44,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-10-11 23:21:44,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-10-11 23:21:44,704 [ scc.git] DEBUG Resetting... 2026-10-11 23:21:44,704 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-10-11 23:21:44,851 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2026-10-11 23:21:44,852 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-10-11 23:21:45,206 [ scc.git] DEBUG Check current status 2026-10-11 23:21:45,206 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-11 23:21:45,225 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2026-10-11 23:21:45,226 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-11 23:21:45,377 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2026-10-11 23:21:45,414 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2026-10-11 23:21:45,473 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5) 2026-10-11 23:21:45,513 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2026-10-11 23:21:45,561 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2026-10-11 23:21:45,562 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-10-11 23:21:45,562 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-10-11 23:21:45,562 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-10-11 23:21:45,562 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-10-11 23:21:45,562 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-10-11 23:21:45,562 [ scc.repo] DEBUG ## PRs found: 2026-10-11 23:21:45,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2026-10-11 23:21:46,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None 2026-10-11 23:21:46,401 [ scc.repo] DEBUG # ... Include label: dependencies 2026-10-11 23:21:46,401 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' 2026-10-11 23:21:46,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None 2026-10-11 23:21:46,913 [ scc.repo] DEBUG # ... Include label: dependencies 2026-10-11 23:21:46,913 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' 2026-10-11 23:21:47,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None 2026-10-11 23:21:47,430 [ scc.repo] DEBUG # ... Include label: dependencies 2026-10-11 23:21:47,430 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' 2026-10-11 23:21:47,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None 2026-10-11 23:21:47,936 [ scc.repo] DEBUG # ... Include label: dependencies 2026-10-11 23:21:47,936 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' 2026-10-11 23:21:47,936 [ scc.repo] DEBUG ## Branches found: 2026-10-11 23:21:47,936 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:21:47,937 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:21:47,949 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-10-11 23:21:47,967 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-10-11 23:21:47,967 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-10-11 23:21:47,986 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-10-11 23:21:48,041 [ scc.git] DEBUG Already up to date. 2026-10-11 23:21:48,041 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head' 2026-10-11 23:21:48,468 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-10-11 23:21:48,468 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD 2026-10-11 23:21:48,500 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2026-10-11 23:21:48,889 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-10-11 23:21:48,889 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2026-10-11 23:21:48,914 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head' 2026-10-11 23:21:49,322 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-10-11 23:21:49,322 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD 2026-10-11 23:21:49,352 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head' 2026-10-11 23:21:50,044 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-10-11 23:21:50,044 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD 2026-10-11 23:21:50,083 [ scc.git] DEBUG ## Unique users: [] 2026-10-11 23:21:50,083 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:21:50,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:21:50,093 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c' 2026-10-11 23:21:50,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:21:50,125 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c' 2026-10-11 23:21:50,382 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-11 23:21:50,438 [ scc.git] DEBUG omero-marshal | 2 +- 2026-10-11 23:21:50,438 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-10-11 23:21:50,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:21:50,623 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa' 2026-10-11 23:21:50,649 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:21:50,660 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa' 2026-10-11 23:21:50,951 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-11 23:21:51,019 [ scc.git] DEBUG omero-web | 2 +- 2026-10-11 23:21:51,019 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-10-11 23:21:51,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:21:51,209 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf' 2026-10-11 23:21:51,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:21:51,252 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf' 2026-10-11 23:21:51,563 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-11 23:21:51,635 [ scc.git] DEBUG omero-dropbox | 2 +- 2026-10-11 23:21:51,635 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-10-11 23:21:51,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:21:51,823 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d' 2026-10-11 23:21:51,852 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:21:51,865 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d' 2026-10-11 23:21:52,165 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-11 23:21:52,221 [ scc.git] DEBUG omero-py | 2 +- 2026-10-11 23:21:52,221 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-10-11 23:21:52,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:21:52,407 [ scc.git] DEBUG Calling 'git submodule update' 2026-10-11 23:21:52,739 [ scc.git] DEBUG Submodule path 'omero-dropbox': checked out 'ac93ed4b4a139dd73b414ead55223071fc465de5' 2026-10-11 23:21:53,021 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c' 2026-10-11 23:21:53,641 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1' 2026-10-11 23:21:54,545 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b' 2026-10-11 23:21:54,545 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:21:54,545 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:21:54,556 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-10-11 23:21:55,452 [ scc.git] DEBUG has no local changes 2026-10-11 23:21:55,452 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' Generated by OMERO-python-superbuild-push#97 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/97/)' 2026-10-11 23:21:55,919 [ scc.git] DEBUG [detached HEAD 1259cc2] merge master -Dorg -Snone 2026-10-11 23:21:55,921 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2026-10-11 23:21:55,921 [ scc.merge] INFO Already up to date. 2026-10-11 23:21:55,921 [ scc.merge] INFO 2026-10-11 23:21:55,921 [ scc.merge] INFO Merged PRs: 2026-10-11 23:21:55,921 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' 2026-10-11 23:21:55,921 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' 2026-10-11 23:21:55,921 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' 2026-10-11 23:21:55,921 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' 2026-10-11 23:21:55,921 [ scc.merge] INFO 2026-10-11 23:21:55,921 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-10-11 23:21:55,921 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Submodule path 'omero-marshal': checked out 'f8ff1c2e439f0599d96423b7f64898864548ba9f' Submodule path 'omero-py': checked out '8990768db971d03ea5dafabc177aab910f567c68' Submodule path 'omero-scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Submodule path 'omero-web': checked out 'bf6d9d9236add51d41b100c8bc2cff6bdc917389' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2026-10-11 23:22:02,685 [ scc.config] DEBUG Found github.token 2026-10-11 23:22:02,686 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-10-11 23:22:02,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:22:03,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:22:03,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-10-11 23:22:03,806 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 00:10 2026-10-11 23:22:03,807 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-10-11 23:22:03,818 [ scc.git] DEBUG Check current status 2026-10-11 23:22:03,818 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-11 23:22:03,843 [ scc.git] DEBUG 1259cc2 merge master -Dorg -Snone 2026-10-11 23:22:03,844 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-11 23:22:03,999 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4) 2026-10-11 23:22:04,034 [ scc.git] DEBUG +f8ff1c2e439f0599d96423b7f64898864548ba9f omero-marshal (v0.9.1-3-gf8ff1c2) 2026-10-11 23:22:04,105 [ scc.git] DEBUG +8990768db971d03ea5dafabc177aab910f567c68 omero-py (v5.23.0-37-g8990768d) 2026-10-11 23:22:04,136 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 omero-scripts (v5.10.0-1-g5b4d768) 2026-10-11 23:22:04,177 [ scc.git] DEBUG +bf6d9d9236add51d41b100c8bc2cff6bdc917389 omero-web (v5.33.2-1-gbf6d9d923) 2026-10-11 23:22:04,192 [ scc.config] DEBUG Found remote.origin.url 2026-10-11 23:22:04,192 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-10-11 23:22:04,194 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2026-10-11 23:22:04,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2026-10-11 23:22:05,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-10-11 23:22:05,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-10-11 23:22:06,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-10-11 23:22:06,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-10-11 23:22:06,652 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-11 23:22:06,775 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2026-10-11 23:22:06,775 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-10-11 23:22:06,796 [ scc.git] DEBUG Check current status 2026-10-11 23:22:06,797 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-11 23:22:06,818 [ scc.git] DEBUG ac93ed4 Merge pull request #26 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2026-10-11 23:22:06,819 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-11 23:22:06,952 [ scc.config] DEBUG Found remote.origin.url 2026-10-11 23:22:07,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2026-10-11 23:22:07,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-10-11 23:22:08,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-10-11 23:22:08,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-10-11 23:22:09,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-10-11 23:22:09,318 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-11 23:22:09,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-11 23:22:09,431 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2026-10-11 23:22:09,431 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-10-11 23:22:09,447 [ scc.git] DEBUG Check current status 2026-10-11 23:22:09,447 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-11 23:22:09,466 [ scc.git] DEBUG f8ff1c2 Merge pull request #90 from sbesson/python_3.9_removal 2026-10-11 23:22:09,467 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-11 23:22:09,591 [ scc.config] DEBUG Found remote.origin.url 2026-10-11 23:22:09,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2026-10-11 23:22:10,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-10-11 23:22:10,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-10-11 23:22:11,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-10-11 23:22:11,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-10-11 23:22:11,797 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-11 23:22:11,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-11 23:22:11,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2026-10-11 23:22:11,918 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-10-11 23:22:11,931 [ scc.git] DEBUG Check current status 2026-10-11 23:22:11,932 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-11 23:22:11,961 [ scc.git] DEBUG 8990768d Merge pull request #489 from will-moore/getObjects_Annotations 2026-10-11 23:22:11,964 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-11 23:22:12,071 [ scc.config] DEBUG Found remote.origin.url 2026-10-11 23:22:12,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2026-10-11 23:22:12,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-10-11 23:22:13,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-10-11 23:22:13,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-10-11 23:22:14,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-10-11 23:22:14,321 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-11 23:22:14,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-11 23:22:14,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2026-10-11 23:22:14,430 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-10-11 23:22:14,442 [ scc.git] DEBUG Check current status 2026-10-11 23:22:14,442 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-11 23:22:14,462 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-10-11 23:22:14,463 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-11 23:22:14,579 [ scc.config] DEBUG Found remote.origin.url 2026-10-11 23:22:14,580 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-10-11 23:22:14,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2026-10-11 23:22:15,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-10-11 23:22:15,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-10-11 23:22:16,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-10-11 23:22:16,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-10-11 23:22:16,733 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-11 23:22:16,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-11 23:22:16,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2026-10-11 23:22:16,857 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-10-11 23:22:16,873 [ scc.git] DEBUG Check current status 2026-10-11 23:22:16,873 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-11 23:22:16,906 [ scc.git] DEBUG bf6d9d923 Bump version: 5.33.2 → 5.33.3.dev0 2026-10-11 23:22:16,907 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-11 23:22:17,020 [ scc.config] DEBUG Found remote.origin.url 2026-10-11 23:22:17,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2026-10-11 23:22:17,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-10-11 23:22:18,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-10-11 23:22:18,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-10-11 23:22:19,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-10-11 23:22:19,203 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-11 23:22:19,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-11 23:22:19,311 [ scc.git] DEBUG Resetting... 2026-10-11 23:22:19,311 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-10-11 23:22:19,461 [ scc.git] DEBUG HEAD is now at 1259cc2 merge master -Dorg -Snone 2026-10-11 23:22:19,463 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-10-11 23:22:19,897 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c' 2026-10-11 23:22:20,521 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1' 2026-10-11 23:22:20,833 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5' 2026-10-11 23:22:22,092 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b' 2026-10-11 23:22:22,112 [ scc.git] DEBUG Check current status 2026-10-11 23:22:22,113 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-10-11 23:22:22,129 [ scc.git] DEBUG 1259cc2 merge master -Dorg -Snone 2026-10-11 23:22:22,130 [ scc.git] DEBUG Calling 'git submodule status' 2026-10-11 23:22:22,263 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4) 2026-10-11 23:22:22,291 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b) 2026-10-11 23:22:22,335 [ scc.git] DEBUG b44120b5235b24db6dde315369ea1519bbeb30c1 omero-py (v5.21.2-3-gb44120b5) 2026-10-11 23:22:22,371 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2026-10-11 23:22:22,410 [ scc.git] DEBUG 675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b omero-web (v5.29.3-1-g675d57fd7) 2026-10-11 23:22:22,411 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-10-11 23:22:22,411 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-10-11 23:22:22,411 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-10-11 23:22:22,411 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-10-11 23:22:22,411 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-10-11 23:22:22,411 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-10-11 23:22:22,411 [ scc.repo] DEBUG ## PRs found: 2026-10-11 23:22:22,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2026-10-11 23:22:23,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None 2026-10-11 23:22:23,263 [ scc.repo] DEBUG # ... Include label: dependencies 2026-10-11 23:22:23,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None 2026-10-11 23:22:24,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-11 23:22:24,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None 2026-10-11 23:22:25,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?per_page=1 HTTP/1.1" 200 2 2026-10-11 23:22:25,404 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' 2026-10-11 23:22:25,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None 2026-10-11 23:22:25,923 [ scc.repo] DEBUG # ... Include label: dependencies 2026-10-11 23:22:26,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None 2026-10-11 23:22:27,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-11 23:22:27,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None 2026-10-11 23:22:28,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/09050892c054f3697fd3604d05ce68b65af6dedf?per_page=1 HTTP/1.1" 200 2 2026-10-11 23:22:28,046 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' 2026-10-11 23:22:28,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None 2026-10-11 23:22:28,556 [ scc.repo] DEBUG # ... Include label: dependencies 2026-10-11 23:22:29,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None 2026-10-11 23:22:29,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-11 23:22:30,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None 2026-10-11 23:22:30,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/7632acc02b92ba91ed954701ac52de2732a56daa?per_page=1 HTTP/1.1" 200 2 2026-10-11 23:22:30,705 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' 2026-10-11 23:22:31,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None 2026-10-11 23:22:31,225 [ scc.repo] DEBUG # ... Include label: dependencies 2026-10-11 23:22:31,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None 2026-10-11 23:22:32,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-11 23:22:33,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None 2026-10-11 23:22:33,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/e5077065e3781e634471b4828f120f18c16dad1c?per_page=1 HTTP/1.1" 200 2 2026-10-11 23:22:33,516 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' 2026-10-11 23:22:33,516 [ scc.repo] DEBUG ## Branches found: 2026-10-11 23:22:33,516 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:22:33,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:22:33,529 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-10-11 23:22:33,547 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-10-11 23:22:33,547 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-10-11 23:22:33,572 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-10-11 23:22:33,635 [ scc.git] DEBUG Already up to date. 2026-10-11 23:22:33,635 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head' 2026-10-11 23:22:34,096 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-10-11 23:22:34,096 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD 2026-10-11 23:22:34,128 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2026-10-11 23:22:34,557 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-10-11 23:22:34,557 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2026-10-11 23:22:34,586 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head' 2026-10-11 23:22:35,010 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-10-11 23:22:35,011 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD 2026-10-11 23:22:35,040 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head' 2026-10-11 23:22:35,489 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2026-10-11 23:22:35,489 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD 2026-10-11 23:22:35,521 [ scc.git] DEBUG ## Unique users: [] 2026-10-11 23:22:35,521 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:22:35,521 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:22:35,532 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c' 2026-10-11 23:22:35,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:22:35,570 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c' 2026-10-11 23:22:35,630 [ scc.git] DEBUG Already up to date. 2026-10-11 23:22:35,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:22:35,835 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa' 2026-10-11 23:22:35,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:22:35,875 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa' 2026-10-11 23:22:35,935 [ scc.git] DEBUG Already up to date. 2026-10-11 23:22:36,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:22:36,316 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf' 2026-10-11 23:22:36,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:22:36,360 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf' 2026-10-11 23:22:36,410 [ scc.git] DEBUG Already up to date. 2026-10-11 23:22:36,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:22:36,744 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d' 2026-10-11 23:22:36,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:22:36,787 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d' 2026-10-11 23:22:36,841 [ scc.git] DEBUG Already up to date. 2026-10-11 23:22:37,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:22:37,177 [ scc.git] DEBUG Calling 'git submodule update' 2026-10-11 23:22:37,426 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:22:37,426 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:22:37,436 [ scc.repo] DEBUG ## PRs found: 2026-10-11 23:22:37,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 2 2026-10-11 23:22:37,657 [ scc.repo] DEBUG ## Branches found: 2026-10-11 23:22:37,657 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2026-10-11 23:22:37,657 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:22:37,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:22:37,674 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-10-11 23:22:37,691 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-10-11 23:22:37,691 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-10-11 23:22:37,715 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-10-11 23:22:37,782 [ scc.git] DEBUG Already up to date. 2026-10-11 23:22:37,782 [ scc.git] DEBUG ## Unique users: [] 2026-10-11 23:22:37,782 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:22:37,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:22:37,800 [ scc.git] DEBUG Calling 'git submodule update' 2026-10-11 23:22:37,919 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:22:37,919 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:22:37,932 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-11 23:22:38,042 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-10-11 23:22:38,097 [ scc.git] DEBUG has no local changes 2026-10-11 23:22:38,097 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Generated by OMERO-python-superbuild-push#97 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/97/)' 2026-10-11 23:22:38,282 [ scc.git] DEBUG [detached HEAD 15a70df] merge master -Dorg -Ssuccess-only 2026-10-11 23:22:38,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-11 23:22:38,284 [ scc.repo] DEBUG ## PRs found: 2026-10-11 23:22:38,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2026-10-11 23:22:39,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2026-10-11 23:22:39,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2026-10-11 23:22:40,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2026-10-11 23:22:40,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2026-10-11 23:22:41,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2026-10-11 23:22:41,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2026-10-11 23:22:41,609 [ scc.repo] DEBUG ## Branches found: 2026-10-11 23:22:41,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2026-10-11 23:22:41,609 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:22:41,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:22:41,627 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-10-11 23:22:41,646 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-10-11 23:22:41,646 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-10-11 23:22:41,686 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-10-11 23:22:41,952 [ scc.git] DEBUG Updating a3dd99b..f8ff1c2 2026-10-11 23:22:42,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/90 HTTP/1.1" 200 None 2026-10-11 23:22:43,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/89 HTTP/1.1" 200 None 2026-10-11 23:22:44,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/69 HTTP/1.1" 200 None 2026-10-11 23:22:45,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/88 HTTP/1.1" 200 None 2026-10-11 23:22:45,131 [ scc.git] DEBUG ## Unique users: [] 2026-10-11 23:22:45,131 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:22:45,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:22:45,154 [ scc.git] DEBUG Calling 'git submodule update' 2026-10-11 23:22:45,274 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:22:45,274 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:22:45,287 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-11 23:22:45,409 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-10-11 23:22:45,506 [ scc.git] DEBUG has no local changes 2026-10-11 23:22:45,506 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Updating a3dd99b..f8ff1c2 Previously merged: - PR 90 sbesson 'Remove Python 3.9 from the testing matrix' - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step' - PR 69 will-moore 'Roi encoder allows Shape None' - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages' Generated by OMERO-python-superbuild-push#97 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/97/)' 2026-10-11 23:22:45,642 [ scc.git] DEBUG [detached HEAD cbb5b75] merge master -Dorg -Ssuccess-only 2026-10-11 23:22:45,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-11 23:22:45,644 [ scc.repo] DEBUG ## PRs found: 2026-10-11 23:22:46,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2026-10-11 23:22:46,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None 2026-10-11 23:22:47,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None 2026-10-11 23:22:47,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2026-10-11 23:22:48,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459/comments HTTP/1.1" 200 None 2026-10-11 23:22:48,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None 2026-10-11 23:22:49,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-11 23:22:49,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-11 23:22:50,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None 2026-10-11 23:22:50,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/57c54f02b543e8f7da852c34a0ababf95562853d?per_page=1 HTTP/1.1" 200 None 2026-10-11 23:22:51,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None 2026-10-11 23:22:51,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/status HTTP/1.1" 200 None 2026-10-11 23:22:51,865 [ scc.repo] DEBUG - PR 459 Tom-TBT 'Wrapper improvements for ROIs' 2026-10-11 23:22:52,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2026-10-11 23:22:52,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2026-10-11 23:22:53,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None 2026-10-11 23:22:53,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-11 23:22:54,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None 2026-10-11 23:22:54,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2026-10-11 23:22:54,858 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2026-10-11 23:22:54,858 [ scc.repo] DEBUG ## Branches found: 2026-10-11 23:22:54,858 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2026-10-11 23:22:54,859 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:22:54,859 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:22:54,875 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-10-11 23:22:54,891 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-10-11 23:22:54,892 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-10-11 23:22:55,353 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-10-11 23:22:55,897 [ scc.git] DEBUG Updating b44120b5..8990768d 2026-10-11 23:22:56,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/489 HTTP/1.1" 200 None 2026-10-11 23:22:57,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/498 HTTP/1.1" 200 None 2026-10-11 23:22:58,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/495 HTTP/1.1" 200 None 2026-10-11 23:22:59,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/496 HTTP/1.1" 200 None 2026-10-11 23:23:00,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/199 HTTP/1.1" 200 None 2026-10-11 23:23:01,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/492 HTTP/1.1" 200 None 2026-10-11 23:23:01,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/493 HTTP/1.1" 200 None 2026-10-11 23:23:02,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/491 HTTP/1.1" 200 None 2026-10-11 23:23:03,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/490 HTTP/1.1" 200 None 2026-10-11 23:23:04,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/483 HTTP/1.1" 200 None 2026-10-11 23:23:04,260 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2026-10-11 23:23:04,855 [ scc.git] DEBUG From https://github.com/ome/omero-py 2026-10-11 23:23:04,855 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2026-10-11 23:23:04,888 [ scc.git] DEBUG Calling 'git fetch origin pull/459/head' 2026-10-11 23:23:05,791 [ scc.git] DEBUG From https://github.com/ome/omero-py 2026-10-11 23:23:05,791 [ scc.git] DEBUG * branch refs/pull/459/head -> FETCH_HEAD 2026-10-11 23:23:05,818 [ scc.git] DEBUG ## Unique users: [] 2026-10-11 23:23:05,818 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:23:05,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:23:05,834 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2026-10-11 23:23:05,907 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:23:05,925 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2026-10-11 23:23:06,246 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2026-10-11 23:23:06,329 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-11 23:23:06,422 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2026-10-11 23:23:06,422 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2026-10-11 23:23:06,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:23:06,608 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...57c54f02b543e8f7da852c34a0ababf95562853d' 2026-10-11 23:23:06,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:23:06,708 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 459 (Wrapper improvements for ROIs) 57c54f02b543e8f7da852c34a0ababf95562853d' 2026-10-11 23:23:07,057 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2026-10-11 23:23:07,135 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-11 23:23:07,223 [ scc.git] DEBUG src/omero/gateway/__init__.py | 45 ++++++++++++++++++++++++++++++++++++------- 2026-10-11 23:23:07,224 [ scc.git] DEBUG 1 file changed, 38 insertions(+), 7 deletions(-) 2026-10-11 23:23:07,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:23:07,624 [ scc.git] DEBUG Calling 'git submodule update' 2026-10-11 23:23:07,762 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:23:07,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:23:07,776 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-11 23:23:07,880 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-10-11 23:23:07,978 [ scc.git] DEBUG has no local changes 2026-10-11 23:23:07,978 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) Updating b44120b5..8990768d Previously merged: - PR 489 will-moore 'Add more opts support for getObjects('Annotation')' - PR 498 sbesson 'Upgrade GitHub actions' - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo' - PR 496 will-moore 'Fix ice-3.6 download link in README' - PR 199 joshmoore 'user: allow setting default group' - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository' - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse' - PR 491 kkoz 'First pass at better cleanse dry-run output' - PR 490 sbesson 'Remove support from Python 3.9' - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()' Merged PRs: - PR 391 joshmoore 'Add jstack command' - PR 459 Tom-TBT 'Wrapper improvements for ROIs' Generated by OMERO-python-superbuild-push#97 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/97/)' 2026-10-11 23:23:08,207 [ scc.git] DEBUG [detached HEAD c5f171e4] merge master -Dorg -Ssuccess-only 2026-10-11 23:23:08,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-11 23:23:08,211 [ scc.git] INFO Overriding base-branch from master to develop 2026-10-11 23:23:08,211 [ scc.repo] DEBUG ## PRs found: 2026-10-11 23:23:08,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-10-11 23:23:09,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/235 HTTP/1.1" 200 None 2026-10-11 23:23:09,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/235/comments HTTP/1.1" 200 None 2026-10-11 23:23:10,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/9f03fdbd8237f5cdbffeac0a45869ee4bd570327?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:10,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/9f03fdbd8237f5cdbffeac0a45869ee4bd570327/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:11,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/9f03fdbd8237f5cdbffeac0a45869ee4bd570327/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-11 23:23:11,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/9f03fdbd8237f5cdbffeac0a45869ee4bd570327?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:12,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/9f03fdbd8237f5cdbffeac0a45869ee4bd570327?per_page=1 HTTP/1.1" 200 2 2026-10-11 23:23:12,128 [ scc.repo] DEBUG - PR 235 will-moore 'Batch roi export tags' 2026-10-11 23:23:12,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None 2026-10-11 23:23:13,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:13,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:14,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-11 23:23:14,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:15,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2 2026-10-11 23:23:15,175 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-10-11 23:23:15,175 [ scc.repo] DEBUG ## Branches found: 2026-10-11 23:23:15,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2026-10-11 23:23:15,175 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:23:15,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:23:15,192 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-10-11 23:23:15,211 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-10-11 23:23:15,211 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-10-11 23:23:15,256 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-10-11 23:23:15,508 [ scc.git] DEBUG Updating 03b9116..5b4d768 2026-10-11 23:23:16,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-10-11 23:23:16,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-10-11 23:23:17,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-10-11 23:23:18,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-10-11 23:23:18,641 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head' 2026-10-11 23:23:19,157 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2026-10-11 23:23:19,157 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD 2026-10-11 23:23:19,182 [ scc.git] DEBUG Calling 'git fetch origin pull/235/head' 2026-10-11 23:23:19,848 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2026-10-11 23:23:19,848 [ scc.git] DEBUG * branch refs/pull/235/head -> FETCH_HEAD 2026-10-11 23:23:19,876 [ scc.git] DEBUG ## Unique users: [] 2026-10-11 23:23:19,876 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:23:19,876 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:23:19,891 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f' 2026-10-11 23:23:19,929 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:23:19,944 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f' 2026-10-11 23:23:20,208 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-11 23:23:20,286 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++-- 2026-10-11 23:23:20,286 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2026-10-11 23:23:20,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:23:20,467 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9f03fdbd8237f5cdbffeac0a45869ee4bd570327' 2026-10-11 23:23:20,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:23:20,558 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 235 (Batch roi export tags) 9f03fdbd8237f5cdbffeac0a45869ee4bd570327' 2026-10-11 23:23:20,835 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-11 23:23:20,937 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 48 +++++++++++++++++++++----------- 2026-10-11 23:23:20,937 [ scc.git] DEBUG test/integration/test_export_scripts.py | 11 ++++++-- 2026-10-11 23:23:20,937 [ scc.git] DEBUG 2 files changed, 40 insertions(+), 19 deletions(-) 2026-10-11 23:23:21,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:23:21,130 [ scc.git] DEBUG Calling 'git submodule update' 2026-10-11 23:23:21,285 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:23:21,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:23:21,307 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-11 23:23:21,468 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-10-11 23:23:21,572 [ scc.git] DEBUG has no local changes 2026-10-11 23:23:21,572 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Updating 03b9116..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' - PR 235 will-moore 'Batch roi export tags' Generated by OMERO-python-superbuild-push#97 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/97/)' 2026-10-11 23:23:21,821 [ scc.git] DEBUG [detached HEAD 677ecb2] merge master -Dorg -Ssuccess-only 2026-10-11 23:23:21,823 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-11 23:23:21,824 [ scc.repo] DEBUG ## PRs found: 2026-10-11 23:23:22,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2026-10-11 23:23:22,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/694 HTTP/1.1" 200 None 2026-10-11 23:23:23,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/828d8d00e3a69b213a069ac150eb7ce1634d002d?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:23,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/828d8d00e3a69b213a069ac150eb7ce1634d002d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:24,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/828d8d00e3a69b213a069ac150eb7ce1634d002d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-11 23:23:25,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/828d8d00e3a69b213a069ac150eb7ce1634d002d?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:25,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/828d8d00e3a69b213a069ac150eb7ce1634d002d?per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:25,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/828d8d00e3a69b213a069ac150eb7ce1634d002d?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:26,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/828d8d00e3a69b213a069ac150eb7ce1634d002d/status HTTP/1.1" 200 None 2026-10-11 23:23:26,492 [ scc.repo] DEBUG - PR 694 knabar 'Fix exception when ann.ns is null' 2026-10-11 23:23:27,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/693 HTTP/1.1" 200 None 2026-10-11 23:23:27,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/687 HTTP/1.1" 200 None 2026-10-11 23:23:28,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/687/comments HTTP/1.1" 200 None 2026-10-11 23:23:28,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684 HTTP/1.1" 200 None 2026-10-11 23:23:29,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684/comments HTTP/1.1" 200 None 2026-10-11 23:23:29,094 [ scc.repo] DEBUG # ... Include label: include 2026-10-11 23:23:29,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:30,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:30,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-11 23:23:31,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:31,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:32,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:32,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/status HTTP/1.1" 200 None 2026-10-11 23:23:32,703 [ scc.repo] DEBUG - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' 2026-10-11 23:23:33,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682 HTTP/1.1" 200 None 2026-10-11 23:23:33,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682/comments HTTP/1.1" 200 None 2026-10-11 23:23:34,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:34,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:35,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-11 23:23:35,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:36,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/2e6b8720dd1d8506d474bf40e282184270ae2634?per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:36,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:37,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/status HTTP/1.1" 200 None 2026-10-11 23:23:37,285 [ scc.repo] DEBUG - PR 682 will-moore 'Initial support for JSON api /annotations endpoint' 2026-10-11 23:23:37,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677 HTTP/1.1" 200 None 2026-10-11 23:23:38,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677/comments HTTP/1.1" 200 None 2026-10-11 23:23:38,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:39,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:39,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-11 23:23:40,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:40,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:41,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:41,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/status HTTP/1.1" 200 None 2026-10-11 23:23:41,915 [ scc.repo] DEBUG - PR 677 will-moore 'Add table_histogram endpoint' 2026-10-11 23:23:42,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644 HTTP/1.1" 200 None 2026-10-11 23:23:42,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644/comments HTTP/1.1" 200 None 2026-10-11 23:23:43,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:44,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:44,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-11 23:23:45,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:45,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:45,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:46,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/status HTTP/1.1" 200 None 2026-10-11 23:23:46,469 [ scc.repo] DEBUG - PR 644 jo-mueller 'Add some install instructions for windows' 2026-10-11 23:23:46,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643 HTTP/1.1" 200 None 2026-10-11 23:23:47,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643/comments HTTP/1.1" 200 None 2026-10-11 23:23:48,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:48,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:49,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-11 23:23:49,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:50,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1122646161dfcf0118e5940417b3c04a9568f93e?per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:50,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:51,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/status HTTP/1.1" 200 None 2026-10-11 23:23:51,099 [ scc.repo] DEBUG - PR 643 will-moore 'Don't disable the histogram for big images' 2026-10-11 23:23:51,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638 HTTP/1.1" 200 None 2026-10-11 23:23:52,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638/comments HTTP/1.1" 200 None 2026-10-11 23:23:52,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2026-10-11 23:23:53,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2026-10-11 23:23:53,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:54,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:54,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-10-11 23:23:55,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:55,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:56,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:56,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2026-10-11 23:23:56,935 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2026-10-11 23:23:57,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2026-10-11 23:23:57,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602/comments HTTP/1.1" 200 None 2026-10-11 23:23:58,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:59,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-10-11 23:23:59,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None 2026-10-11 23:23:59,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 2 2026-10-11 23:23:59,985 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2026-10-11 23:23:59,986 [ scc.repo] DEBUG ## Branches found: 2026-10-11 23:23:59,986 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2026-10-11 23:23:59,986 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:23:59,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:24:00,017 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-10-11 23:24:00,045 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-10-11 23:24:00,045 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-10-11 23:24:02,088 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-10-11 23:24:03,251 [ scc.git] DEBUG Updating 675d57fd7..bf6d9d923 2026-10-11 23:24:03,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/691 HTTP/1.1" 200 None 2026-10-11 23:24:04,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/685 HTTP/1.1" 200 None 2026-10-11 23:24:05,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/688 HTTP/1.1" 200 None 2026-10-11 23:24:06,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/683 HTTP/1.1" 200 None 2026-10-11 23:24:07,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/681 HTTP/1.1" 200 None 2026-10-11 23:24:08,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/679 HTTP/1.1" 200 None 2026-10-11 23:24:08,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/676 HTTP/1.1" 200 None 2026-10-11 23:24:09,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/675 HTTP/1.1" 200 None 2026-10-11 23:24:10,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/613 HTTP/1.1" 200 None 2026-10-11 23:24:11,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/670 HTTP/1.1" 200 None 2026-10-11 23:24:12,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/667 HTTP/1.1" 200 None 2026-10-11 23:24:13,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/666 HTTP/1.1" 200 None 2026-10-11 23:24:14,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/655 HTTP/1.1" 200 None 2026-10-11 23:24:15,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/665 HTTP/1.1" 200 None 2026-10-11 23:24:16,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/664 HTTP/1.1" 200 None 2026-10-11 23:24:17,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/658 HTTP/1.1" 200 None 2026-10-11 23:24:18,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/656 HTTP/1.1" 200 None 2026-10-11 23:24:19,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/653 HTTP/1.1" 200 None 2026-10-11 23:24:20,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/646 HTTP/1.1" 200 None 2026-10-11 23:24:20,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/639 HTTP/1.1" 200 None 2026-10-11 23:24:21,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/662 HTTP/1.1" 200 None 2026-10-11 23:24:22,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/651 HTTP/1.1" 200 None 2026-10-11 23:24:23,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/650 HTTP/1.1" 200 None 2026-10-11 23:24:24,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/649 HTTP/1.1" 200 None 2026-10-11 23:24:24,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/648 HTTP/1.1" 200 None 2026-10-11 23:24:25,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/647 HTTP/1.1" 200 None 2026-10-11 23:24:26,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/645 HTTP/1.1" 200 None 2026-10-11 23:24:27,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/637 HTTP/1.1" 200 None 2026-10-11 23:24:28,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/629 HTTP/1.1" 200 None 2026-10-11 23:24:29,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/628 HTTP/1.1" 200 None 2026-10-11 23:24:29,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/619 HTTP/1.1" 200 None 2026-10-11 23:24:30,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/612 HTTP/1.1" 200 None 2026-10-11 23:24:31,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/534 HTTP/1.1" 200 None 2026-10-11 23:24:31,491 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2026-10-11 23:24:32,074 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-10-11 23:24:32,074 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2026-10-11 23:24:32,104 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2026-10-11 23:24:32,784 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-10-11 23:24:32,784 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2026-10-11 23:24:32,815 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head' 2026-10-11 23:24:33,492 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-10-11 23:24:33,492 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD 2026-10-11 23:24:33,528 [ scc.git] DEBUG Calling 'git fetch origin pull/644/head' 2026-10-11 23:24:34,127 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-10-11 23:24:34,127 [ scc.git] DEBUG * branch refs/pull/644/head -> FETCH_HEAD 2026-10-11 23:24:34,159 [ scc.git] DEBUG Calling 'git fetch origin pull/677/head' 2026-10-11 23:24:34,766 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-10-11 23:24:34,766 [ scc.git] DEBUG * branch refs/pull/677/head -> FETCH_HEAD 2026-10-11 23:24:34,799 [ scc.git] DEBUG Calling 'git fetch origin pull/682/head' 2026-10-11 23:24:35,650 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-10-11 23:24:35,650 [ scc.git] DEBUG * branch refs/pull/682/head -> FETCH_HEAD 2026-10-11 23:24:35,676 [ scc.git] DEBUG Calling 'git fetch origin pull/684/head' 2026-10-11 23:24:36,286 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-10-11 23:24:36,286 [ scc.git] DEBUG * branch refs/pull/684/head -> FETCH_HEAD 2026-10-11 23:24:36,317 [ scc.git] DEBUG Calling 'git fetch origin pull/694/head' 2026-10-11 23:24:36,891 [ scc.git] DEBUG From https://github.com/ome/omero-web 2026-10-11 23:24:36,891 [ scc.git] DEBUG * branch refs/pull/694/head -> FETCH_HEAD 2026-10-11 23:24:36,921 [ scc.git] DEBUG ## Unique users: [] 2026-10-11 23:24:36,921 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:24:36,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:24:36,936 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2026-10-11 23:24:37,028 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:24:37,046 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2026-10-11 23:24:37,752 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css 2026-10-11 23:24:37,836 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-11 23:24:37,934 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2026-10-11 23:24:37,934 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2026-10-11 23:24:37,934 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2026-10-11 23:24:37,934 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2026-10-11 23:24:37,934 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2026-10-11 23:24:37,934 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2026-10-11 23:24:37,934 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2026-10-11 23:24:37,934 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2026-10-11 23:24:37,934 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2026-10-11 23:24:37,934 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2026-10-11 23:24:37,934 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2026-10-11 23:24:37,934 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2026-10-11 23:24:38,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:24:38,163 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2026-10-11 23:24:38,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:24:38,303 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2026-10-11 23:24:38,749 [ scc.git] DEBUG Auto-merging omeroweb/webclient/controller/container.py 2026-10-11 23:24:38,749 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2026-10-11 23:24:38,830 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-11 23:24:38,933 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2026-10-11 23:24:38,933 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2026-10-11 23:24:38,933 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2026-10-11 23:24:38,933 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2026-10-11 23:24:39,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:24:39,121 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122646161dfcf0118e5940417b3c04a9568f93e' 2026-10-11 23:24:39,233 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:24:39,250 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Don't disable the histogram for big images) 1122646161dfcf0118e5940417b3c04a9568f93e' 2026-10-11 23:24:39,759 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py 2026-10-11 23:24:39,845 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-11 23:24:39,972 [ scc.git] DEBUG .../templates/webclient/annotations/metadata_preview.html | 8 ++++---- 2026-10-11 23:24:39,972 [ scc.git] DEBUG omeroweb/webgateway/static/webgateway/js/ome.histogram.js | 4 ++++ 2026-10-11 23:24:39,972 [ scc.git] DEBUG omeroweb/webgateway/views.py | 4 +--- 2026-10-11 23:24:39,972 [ scc.git] DEBUG 3 files changed, 9 insertions(+), 7 deletions(-) 2026-10-11 23:24:40,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:24:40,164 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1beaa97e6086aaf1e1f8e6147f93dcef722be4f3' 2026-10-11 23:24:40,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:24:40,294 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 644 (Add some install instructions for windows) 1beaa97e6086aaf1e1f8e6147f93dcef722be4f3' 2026-10-11 23:24:40,660 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-11 23:24:40,734 [ scc.git] DEBUG README.rst | 50 ++++++++++++++++++++++++++++++++++++++++++++------ 2026-10-11 23:24:40,735 [ scc.git] DEBUG 1 file changed, 44 insertions(+), 6 deletions(-) 2026-10-11 23:24:40,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:24:40,919 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7' 2026-10-11 23:24:41,071 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:24:41,087 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 677 (Add table_histogram endpoint) 1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7' 2026-10-11 23:24:41,463 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py 2026-10-11 23:24:41,551 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-11 23:24:41,646 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 11 +++++ 2026-10-11 23:24:41,646 [ scc.git] DEBUG omeroweb/webgateway/views.py | 108 +++++++++++++++++++++++++++++++++++++++---- 2026-10-11 23:24:41,646 [ scc.git] DEBUG 2 files changed, 109 insertions(+), 10 deletions(-) 2026-10-11 23:24:41,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:24:41,841 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2e6b8720dd1d8506d474bf40e282184270ae2634' 2026-10-11 23:24:42,006 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:24:42,024 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 682 (Initial support for JSON api /annotations endpoint) 2e6b8720dd1d8506d474bf40e282184270ae2634' 2026-10-11 23:24:42,427 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-11 23:24:42,519 [ scc.git] DEBUG omeroweb/api/urls.py | 22 ++++++++++ 2026-10-11 23:24:42,519 [ scc.git] DEBUG omeroweb/api/views.py | 115 +++++++++++++++++++++++++++++++++++++++++++++++++- 2026-10-11 23:24:42,519 [ scc.git] DEBUG 2 files changed, 136 insertions(+), 1 deletion(-) 2026-10-11 23:24:42,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:24:42,743 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8dbf1c22784a7faaa1db2ff9d5150edbc823e575' 2026-10-11 23:24:42,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:24:42,937 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 684 (add config "omero.web.annotation_order") 8dbf1c22784a7faaa1db2ff9d5150edbc823e575' 2026-10-11 23:24:43,384 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-11 23:24:43,460 [ scc.git] DEBUG omeroweb/settings.py | 21 +++++++++++++++++++++ 2026-10-11 23:24:43,460 [ scc.git] DEBUG omeroweb/webclient/tree.py | 27 ++++++++++++++++++++++++++- 2026-10-11 23:24:43,460 [ scc.git] DEBUG 2 files changed, 47 insertions(+), 1 deletion(-) 2026-10-11 23:24:43,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:24:43,654 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...828d8d00e3a69b213a069ac150eb7ce1634d002d' 2026-10-11 23:24:43,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:24:43,835 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 694 (Fix exception when ann.ns is null) 828d8d00e3a69b213a069ac150eb7ce1634d002d' 2026-10-11 23:24:44,197 [ scc.git] DEBUG Auto-merging omeroweb/webclient/templates/webclient/annotations/mapanns_underscore.html 2026-10-11 23:24:44,275 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-10-11 23:24:44,376 [ scc.git] DEBUG .../webclient/templates/webclient/annotations/mapanns_underscore.html | 4 +++- 2026-10-11 23:24:44,376 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 1 deletion(-) 2026-10-11 23:24:44,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:24:44,558 [ scc.git] DEBUG Calling 'git submodule update' 2026-10-11 23:24:44,691 [ scc.git] DEBUG Get sha1 of %s 2026-10-11 23:24:44,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-10-11 23:24:44,706 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-11 23:24:44,830 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-10-11 23:24:44,997 [ scc.git] DEBUG has no local changes 2026-10-11 23:24:44,997 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik) - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment) Updating 675d57fd7..bf6d9d923 Previously merged: - PR 691 sbesson 'Honor the configured login view when redirecting as the public user' - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission' - PR 688 pwalczysko 'Fix formatting and linting failures' - PR 683 will-moore 'Post data save imgRdef' - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web' - PR 679 knabar 'Allow POST requests from public user for specific URLs' - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel' - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 613 will-moore 'externalInfo display' - PR 670 sbesson 'Webclient activites: defensively cast start_time to string' - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing' - PR 655 will-moore 'Handle invalid group id in switch_active_group' - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x' - PR 664 knabar 'Pin django-pipeline to a recent version' - PR 658 will-moore 'Description scrollable if taller than 350px' - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions' - PR 646 knabar 'Force Django 5.2 in next release' - PR 639 Rdornier 'Split view user label' - PR 662 jburel 'Add gunicorn doc links' - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property' - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 649 Tom-TBT 'Strip line endings from LUTs in text format' - PR 648 will-moore 'hide scrollbar for top-links' - PR 647 jburel 'Replace manual changelog by automated GH release step' - PR 645 knabar 'Update changelog for 5.30.0 release' - PR 637 knabar 'Upgrade to Django 5.2 ' - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 628 jburel 'Add protocol required since Django4' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' Merged PRs: - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 643 will-moore 'Don't disable the histogram for big images' - PR 644 jo-mueller 'Add some install instructions for windows' - PR 677 will-moore 'Add table_histogram endpoint' - PR 682 will-moore 'Initial support for JSON api /annotations endpoint' - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' - PR 694 knabar 'Fix exception when ann.ns is null' Generated by OMERO-python-superbuild-push#97 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/97/)' 2026-10-11 23:24:45,194 [ scc.git] DEBUG [detached HEAD 3c19a2d53] merge master -Dorg -Ssuccess-only 2026-10-11 23:24:45,196 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-11 23:24:45,197 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-10-11 23:24:45,356 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2026-10-11 23:24:45,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:24:45,585 [ scc.config] DEBUG Found submodule.omero-marshal.url 2026-10-11 23:24:45,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:24:46,011 [ scc.config] DEBUG Found submodule.omero-py.url 2026-10-11 23:24:46,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:24:46,455 [ scc.config] DEBUG Found submodule.omero-scripts.url 2026-10-11 23:24:46,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:24:46,891 [ scc.config] DEBUG Found submodule.omero-web.url 2026-10-11 23:24:47,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-10-11 23:24:47,324 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-10-11 23:24:48,019 [ scc.git] DEBUG has local changes 2026-10-11 23:24:48,019 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' Repository: ome/omero-dropbox Already up to date. Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Updating a3dd99b..f8ff1c2 Previously merged: - PR 90 sbesson 'Remove Python 3.9 from the testing matrix' - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step' - PR 69 will-moore 'Roi encoder allows Shape None' - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages' Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) Updating b44120b5..8990768d Previously merged: - PR 489 will-moore 'Add more opts support for getObjects('Annotation')' - PR 498 sbesson 'Upgrade GitHub actions' - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo' - PR 496 will-moore 'Fix ice-3.6 download link in README' - PR 199 joshmoore 'user: allow setting default group' - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository' - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse' - PR 491 kkoz 'First pass at better cleanse dry-run output' - PR 490 sbesson 'Remove support from Python 3.9' - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()' Merged PRs: - PR 391 joshmoore 'Add jstack command' - PR 459 Tom-TBT 'Wrapper improvements for ROIs' Repository: ome/omero-scripts Updating 03b9116..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' - PR 235 will-moore 'Batch roi export tags' Repository: ome/omero-web Excluded PRs: - PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik) - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment) Updating 675d57fd7..bf6d9d923 Previously merged: - PR 691 sbesson 'Honor the configured login view when redirecting as the public user' - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission' - PR 688 pwalczysko 'Fix formatting and linting failures' - PR 683 will-moore 'Post data save imgRdef' - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web' - PR 679 knabar 'Allow POST requests from public user for specific URLs' - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel' - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 613 will-moore 'externalInfo display' - PR 670 sbesson 'Webclient activites: defensively cast start_time to string' - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing' - PR 655 will-moore 'Handle invalid group id in switch_active_group' - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x' - PR 664 knabar 'Pin django-pipeline to a recent version' - PR 658 will-moore 'Description scrollable if taller than 350px' - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions' - PR 646 knabar 'Force Django 5.2 in next release' - PR 639 Rdornier 'Split view user label' - PR 662 jburel 'Add gunicorn doc links' - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property' - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 649 Tom-TBT 'Strip line endings from LUTs in text format' - PR 648 will-moore 'hide scrollbar for top-links' - PR 647 jburel 'Replace manual changelog by automated GH release step' - PR 645 knabar 'Update changelog for 5.30.0 release' - PR 637 knabar 'Upgrade to Django 5.2 ' - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 628 jburel 'Add protocol required since Django4' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' Merged PRs: - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 643 will-moore 'Don't disable the histogram for big images' - PR 644 jo-mueller 'Add some install instructions for windows' - PR 677 will-moore 'Add table_histogram endpoint' - PR 682 will-moore 'Initial support for JSON api /annotations endpoint' - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' - PR 694 knabar 'Fix exception when ann.ns is null' Generated by OMERO-python-superbuild-push#97 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/97/)' 2026-10-11 23:24:48,369 [ scc.git] DEBUG [detached HEAD 4b3c6c8] merge master -Dorg -Ssuccess-only 2026-10-11 23:24:48,369 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2026-10-11 23:24:48,371 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2026-10-11 23:24:48,372 [ scc.merge] INFO Already up to date. 2026-10-11 23:24:48,372 [ scc.merge] INFO 2026-10-11 23:24:48,372 [ scc.merge] INFO Merged PRs: 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`' 2026-10-11 23:24:48,372 [ scc.merge] INFO 2026-10-11 23:24:48,372 [ scc.merge] INFO Repository: ome/omero-dropbox 2026-10-11 23:24:48,372 [ scc.merge] INFO Already up to date. 2026-10-11 23:24:48,372 [ scc.merge] INFO 2026-10-11 23:24:48,372 [ scc.merge] INFO 2026-10-11 23:24:48,372 [ scc.merge] INFO Repository: ome/omero-marshal 2026-10-11 23:24:48,372 [ scc.merge] INFO Excluded PRs: 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2026-10-11 23:24:48,372 [ scc.merge] INFO Updating a3dd99b..f8ff1c2 2026-10-11 23:24:48,372 [ scc.merge] INFO Previously merged: 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 90 sbesson 'Remove Python 3.9 from the testing matrix' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages' 2026-10-11 23:24:48,372 [ scc.merge] INFO 2026-10-11 23:24:48,372 [ scc.merge] INFO 2026-10-11 23:24:48,372 [ scc.merge] INFO Repository: ome/omero-py 2026-10-11 23:24:48,372 [ scc.merge] INFO Excluded PRs: 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric) 2026-10-11 23:24:48,372 [ scc.merge] INFO Updating b44120b5..8990768d 2026-10-11 23:24:48,372 [ scc.merge] INFO Previously merged: 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 489 will-moore 'Add more opts support for getObjects('Annotation')' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 498 sbesson 'Upgrade GitHub actions' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 496 will-moore 'Fix ice-3.6 download link in README' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 491 kkoz 'First pass at better cleanse dry-run output' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 490 sbesson 'Remove support from Python 3.9' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()' 2026-10-11 23:24:48,372 [ scc.merge] INFO 2026-10-11 23:24:48,372 [ scc.merge] INFO Merged PRs: 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' 2026-10-11 23:24:48,372 [ scc.merge] INFO 2026-10-11 23:24:48,372 [ scc.merge] INFO Repository: ome/omero-scripts 2026-10-11 23:24:48,372 [ scc.merge] INFO Updating 03b9116..5b4d768 2026-10-11 23:24:48,372 [ scc.merge] INFO Previously merged: 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-10-11 23:24:48,372 [ scc.merge] INFO 2026-10-11 23:24:48,372 [ scc.merge] INFO Merged PRs: 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 235 will-moore 'Batch roi export tags' 2026-10-11 23:24:48,372 [ scc.merge] INFO 2026-10-11 23:24:48,372 [ scc.merge] INFO Repository: ome/omero-web 2026-10-11 23:24:48,372 [ scc.merge] INFO Excluded PRs: 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik) 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment) 2026-10-11 23:24:48,372 [ scc.merge] INFO Updating 675d57fd7..bf6d9d923 2026-10-11 23:24:48,372 [ scc.merge] INFO Previously merged: 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 691 sbesson 'Honor the configured login view when redirecting as the public user' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 688 pwalczysko 'Fix formatting and linting failures' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 683 will-moore 'Post data save imgRdef' 2026-10-11 23:24:48,372 [ scc.merge] INFO - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 679 knabar 'Allow POST requests from public user for specific URLs' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 670 sbesson 'Webclient activites: defensively cast start_time to string' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 655 will-moore 'Handle invalid group id in switch_active_group' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 664 knabar 'Pin django-pipeline to a recent version' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 658 will-moore 'Description scrollable if taller than 350px' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 646 knabar 'Force Django 5.2 in next release' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 639 Rdornier 'Split view user label' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 662 jburel 'Add gunicorn doc links' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 649 Tom-TBT 'Strip line endings from LUTs in text format' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 648 will-moore 'hide scrollbar for top-links' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 647 jburel 'Replace manual changelog by automated GH release step' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 645 knabar 'Update changelog for 5.30.0 release' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 637 knabar 'Upgrade to Django 5.2 ' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2026-10-11 23:24:48,373 [ scc.merge] INFO 2026-10-11 23:24:48,373 [ scc.merge] INFO Merged PRs: 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 643 will-moore 'Don't disable the histogram for big images' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 644 jo-mueller 'Add some install instructions for windows' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 677 will-moore 'Add table_histogram endpoint' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 682 will-moore 'Initial support for JSON api /annotations endpoint' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' 2026-10-11 23:24:48,373 [ scc.merge] INFO - PR 694 knabar 'Fix exception when ann.ns is null' 2026-10-11 23:24:48,373 [ scc.merge] INFO 2026-10-11 23:24:48,373 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-10-11 23:24:48,373 [ scc.git] DEBUG Calling 'git remote' 2026-10-11 23:24:48,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2026-10-11 23:24:48,395 [ scc.git] DEBUG Calling 'git remote' 2026-10-11 23:24:48,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-11 23:24:48,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2026-10-11 23:24:48,419 [ scc.git] DEBUG Calling 'git remote' 2026-10-11 23:24:48,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-11 23:24:48,439 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2026-10-11 23:24:48,439 [ scc.git] DEBUG Calling 'git remote' 2026-10-11 23:24:48,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-11 23:24:48,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2026-10-11 23:24:48,458 [ scc.git] DEBUG Calling 'git remote' 2026-10-11 23:24:48,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2026-10-11 23:24:48,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2026-10-11 23:24:48,478 [ scc.git] DEBUG Calling 'git remote' 2026-10-11 23:24:48,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from ac93ed4 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from a3dd99b nothing to commit, working tree clean Entering 'omero-py' HEAD detached from b44120b5 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 03b9116 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 675d57fd7 nothing to commit, working tree clean HEAD detached from b68c3cf nothing to commit, working tree clean 2026-10-11 23:25:31,071 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS