Started by upstream project "Trigger" build number 397 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 1c829a14b02172dd8b49d7d2848c0cd077efa496 (refs/remotes/origin/master) Commit message: "Merge pull request #310 from ome/dependabot/submodules/omero-web-4b979f8" > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 1c829a14b02172dd8b49d7d2848c0cd077efa496 # timeout=10 > git rev-list --no-walk d392493f4cba2796226db2dc2ee9d4e1592cafd6 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 353 [Pipeline] sh > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-25.0.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-25.0.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.1.31-py3-none-any.whl.metadata (2.5 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB) Using cached certifi-2025.1.31-py3-none-any.whl (166 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (146 kB) Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.1.31 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.2 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-03-11 00:36:17,033 [ scc.config] DEBUG Found github.token 2025-03-11 00:36:17,037 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:17,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:36:17,463 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:17,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:36:17,900 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:18,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-03-11 00:36:18,049 [ scc.gh] DEBUG 3108 remaining from 5000 (Reset at 00:03 2025-03-11 00:36:18,050 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-03-11 00:36:18,055 [ scc.git] DEBUG Check current status 2025-03-11 00:36:18,055 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-03-11 00:36:18,059 [ scc.git] DEBUG 1c829a1 Merge pull request #310 from ome/dependabot/submodules/omero-web-4b979f8 2025-03-11 00:36:18,060 [ scc.git] DEBUG Calling 'git submodule status' 2025-03-11 00:36:18,153 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-03-11 00:36:18,376 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-03-11 00:36:18,381 [ scc.git] DEBUG 05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412) 2025-03-11 00:36:18,386 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755) 2025-03-11 00:36:18,390 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-03-11 00:36:18,396 [ scc.config] DEBUG Found remote.origin.url 2025-03-11 00:36:18,398 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:18,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-03-11 00:36:18,910 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:19,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-03-11 00:36:19,440 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:19,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-03-11 00:36:19,877 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:20,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-03-11 00:36:20,324 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:20,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-03-11 00:36:20,504 [ scc.git] DEBUG Resetting... 2025-03-11 00:36:20,505 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-03-11 00:36:20,516 [ scc.git] DEBUG HEAD is now at 1c829a1 Merge pull request #310 from ome/dependabot/submodules/omero-web-4b979f8 2025-03-11 00:36:20,516 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-03-11 00:36:20,580 [ scc.git] DEBUG Check current status 2025-03-11 00:36:20,580 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-03-11 00:36:20,584 [ scc.git] DEBUG 1c829a1 Merge pull request #310 from ome/dependabot/submodules/omero-web-4b979f8 2025-03-11 00:36:20,585 [ scc.git] DEBUG Calling 'git submodule status' 2025-03-11 00:36:20,635 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-03-11 00:36:20,639 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-03-11 00:36:20,644 [ scc.git] DEBUG 05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412) 2025-03-11 00:36:20,648 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755) 2025-03-11 00:36:20,653 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-03-11 00:36:20,654 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-03-11 00:36:20,655 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-03-11 00:36:20,655 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-03-11 00:36:20,655 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-03-11 00:36:20,655 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-03-11 00:36:20,655 [ scc.repo] DEBUG ## PRs found: 2025-03-11 00:36:20,756 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:20,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-03-11 00:36:20,947 [ scc.repo] DEBUG ## Branches found: 2025-03-11 00:36:20,947 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:36:20,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:36:20,952 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-03-11 00:36:20,956 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-03-11 00:36:20,956 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-03-11 00:36:20,961 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-03-11 00:36:20,966 [ scc.git] DEBUG Already up to date. 2025-03-11 00:36:20,966 [ scc.git] DEBUG ## Unique users: [] 2025-03-11 00:36:20,966 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:36:20,966 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:36:20,970 [ scc.git] DEBUG Calling 'git submodule update' 2025-03-11 00:36:21,018 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:36:21,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:36:21,024 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-03-11 00:36:21,547 [ scc.git] DEBUG has no local changes 2025-03-11 00:36:21,547 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#344 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/344/)' 2025-03-11 00:36:21,580 [ scc.git] DEBUG [detached HEAD c01af3e] merge master -Dorg -Snone 2025-03-11 00:36:21,580 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-03-11 00:36:21,581 [ scc.merge] INFO Already up to date. 2025-03-11 00:36:21,581 [ scc.merge] INFO 2025-03-11 00:36:21,581 [ scc.merge] INFO 2025-03-11 00:36:21,581 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-03-11 00:36:21,581 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-03-11 00:36:23,928 [ scc.config] DEBUG Found github.token 2025-03-11 00:36:23,931 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:24,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:36:24,355 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:24,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:36:24,776 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:24,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-03-11 00:36:24,953 [ scc.gh] DEBUG 3100 remaining from 5000 (Reset at 00:03 2025-03-11 00:36:24,954 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-03-11 00:36:24,958 [ scc.git] DEBUG Check current status 2025-03-11 00:36:24,958 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-03-11 00:36:24,962 [ scc.git] DEBUG c01af3e merge master -Dorg -Snone 2025-03-11 00:36:24,962 [ scc.git] DEBUG Calling 'git submodule status' 2025-03-11 00:36:25,010 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-03-11 00:36:25,013 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-03-11 00:36:25,018 [ scc.git] DEBUG 05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412) 2025-03-11 00:36:25,023 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755) 2025-03-11 00:36:25,027 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-03-11 00:36:25,032 [ scc.config] DEBUG Found remote.origin.url 2025-03-11 00:36:25,032 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-03-11 00:36:25,034 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-03-11 00:36:25,205 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:25,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-03-11 00:36:25,728 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:25,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-03-11 00:36:26,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:26,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-03-11 00:36:26,702 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:26,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-03-11 00:36:27,132 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:27,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-03-11 00:36:27,313 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-03-11 00:36:27,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-03-11 00:36:27,365 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-03-11 00:36:27,369 [ scc.git] DEBUG Check current status 2025-03-11 00:36:27,369 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-03-11 00:36:27,373 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-03-11 00:36:27,373 [ scc.git] DEBUG Calling 'git submodule status' 2025-03-11 00:36:27,421 [ scc.config] DEBUG Found remote.origin.url 2025-03-11 00:36:27,565 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:27,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-03-11 00:36:28,098 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:28,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-03-11 00:36:28,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:28,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-03-11 00:36:29,020 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:29,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-03-11 00:36:29,476 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:29,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-03-11 00:36:29,665 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-03-11 00:36:29,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-03-11 00:36:29,711 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-03-11 00:36:29,712 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-03-11 00:36:29,716 [ scc.git] DEBUG Check current status 2025-03-11 00:36:29,716 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-03-11 00:36:29,721 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-03-11 00:36:29,722 [ scc.git] DEBUG Calling 'git submodule status' 2025-03-11 00:36:29,769 [ scc.config] DEBUG Found remote.origin.url 2025-03-11 00:36:29,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:30,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-03-11 00:36:30,422 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:30,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-03-11 00:36:30,910 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:31,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-03-11 00:36:31,340 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:31,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-03-11 00:36:31,778 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:31,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-03-11 00:36:31,962 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-03-11 00:36:32,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-03-11 00:36:32,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-03-11 00:36:32,009 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-03-11 00:36:32,014 [ scc.git] DEBUG Check current status 2025-03-11 00:36:32,014 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-03-11 00:36:32,018 [ scc.git] DEBUG 05d52412 Bump version: 5.19.6 → 5.19.7.dev0 2025-03-11 00:36:32,019 [ scc.git] DEBUG Calling 'git submodule status' 2025-03-11 00:36:32,067 [ scc.config] DEBUG Found remote.origin.url 2025-03-11 00:36:32,213 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:32,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-03-11 00:36:32,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:32,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-03-11 00:36:33,206 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:33,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-03-11 00:36:33,667 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:33,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-03-11 00:36:34,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:34,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-03-11 00:36:34,278 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-03-11 00:36:34,325 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-03-11 00:36:34,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-03-11 00:36:34,326 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-03-11 00:36:34,330 [ scc.git] DEBUG Check current status 2025-03-11 00:36:34,330 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-03-11 00:36:34,335 [ scc.git] DEBUG 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2025-03-11 00:36:34,335 [ scc.git] DEBUG Calling 'git submodule status' 2025-03-11 00:36:34,383 [ scc.config] DEBUG Found remote.origin.url 2025-03-11 00:36:34,384 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-03-11 00:36:34,530 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:34,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-03-11 00:36:35,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:35,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-03-11 00:36:35,570 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:35,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-03-11 00:36:36,035 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:36,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-03-11 00:36:36,477 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:36,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-03-11 00:36:36,687 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-03-11 00:36:36,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-03-11 00:36:36,735 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-03-11 00:36:36,735 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-03-11 00:36:36,740 [ scc.git] DEBUG Check current status 2025-03-11 00:36:36,740 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-03-11 00:36:36,746 [ scc.git] DEBUG 4b979f847 Bump version: 5.29.0 → 5.29.1.dev0 2025-03-11 00:36:36,746 [ scc.git] DEBUG Calling 'git submodule status' 2025-03-11 00:36:36,798 [ scc.config] DEBUG Found remote.origin.url 2025-03-11 00:36:36,939 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:37,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-03-11 00:36:37,517 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:37,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-03-11 00:36:37,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:38,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-03-11 00:36:38,415 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:38,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-03-11 00:36:38,840 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:39,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-03-11 00:36:39,033 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-03-11 00:36:39,081 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-03-11 00:36:39,081 [ scc.git] DEBUG Resetting... 2025-03-11 00:36:39,081 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-03-11 00:36:39,088 [ scc.git] DEBUG HEAD is now at c01af3e merge master -Dorg -Snone 2025-03-11 00:36:39,088 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-03-11 00:36:39,151 [ scc.git] DEBUG Check current status 2025-03-11 00:36:39,151 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-03-11 00:36:39,155 [ scc.git] DEBUG c01af3e merge master -Dorg -Snone 2025-03-11 00:36:39,156 [ scc.git] DEBUG Calling 'git submodule status' 2025-03-11 00:36:39,204 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-03-11 00:36:39,208 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-03-11 00:36:39,219 [ scc.git] DEBUG 05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412) 2025-03-11 00:36:39,224 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755) 2025-03-11 00:36:39,229 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-03-11 00:36:39,230 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-03-11 00:36:39,231 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-03-11 00:36:39,231 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-03-11 00:36:39,231 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-03-11 00:36:39,231 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-03-11 00:36:39,231 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-03-11 00:36:39,231 [ scc.repo] DEBUG ## PRs found: 2025-03-11 00:36:39,285 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:39,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-03-11 00:36:39,468 [ scc.repo] DEBUG ## Branches found: 2025-03-11 00:36:39,468 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:36:39,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:36:39,474 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-03-11 00:36:39,478 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-03-11 00:36:39,478 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-03-11 00:36:39,484 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-03-11 00:36:39,490 [ scc.git] DEBUG Already up to date. 2025-03-11 00:36:39,490 [ scc.git] DEBUG ## Unique users: [] 2025-03-11 00:36:39,490 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:36:39,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:36:39,495 [ scc.git] DEBUG Calling 'git submodule update' 2025-03-11 00:36:39,545 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:36:39,545 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:36:39,550 [ scc.repo] DEBUG ## PRs found: 2025-03-11 00:36:39,721 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:39,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-03-11 00:36:40,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:40,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-03-11 00:36:40,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:41,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-03-11 00:36:41,256 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:41,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-03-11 00:36:41,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:42,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:36:42,305 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:42,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-03-11 00:36:42,892 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:43,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-03-11 00:36:43,077 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-03-11 00:36:43,078 [ scc.repo] DEBUG ## Branches found: 2025-03-11 00:36:43,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-03-11 00:36:43,078 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:36:43,078 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:36:43,083 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-03-11 00:36:43,088 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-03-11 00:36:43,088 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-03-11 00:36:43,094 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-03-11 00:36:43,099 [ scc.git] DEBUG Already up to date. 2025-03-11 00:36:43,100 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-03-11 00:36:43,466 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-03-11 00:36:43,466 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-03-11 00:36:43,471 [ scc.git] DEBUG ## Unique users: [] 2025-03-11 00:36:43,471 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:36:43,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:36:43,476 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-03-11 00:36:43,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:36:43,487 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-03-11 00:36:43,666 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-03-11 00:36:43,666 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-03-11 00:36:43,666 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-03-11 00:36:43,666 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-03-11 00:36:43,666 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-03-11 00:36:43,666 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-03-11 00:36:43,666 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-03-11 00:36:43,666 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-03-11 00:36:43,666 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-03-11 00:36:43,667 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:36:43,672 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-03-11 00:36:43,672 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-03-11 00:36:43,672 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-03-11 00:36:43,672 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-03-11 00:36:43,672 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-03-11 00:36:43,672 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-03-11 00:36:43,672 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-03-11 00:36:43,672 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-03-11 00:36:43,673 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-03-11 00:36:43,676 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:43,676 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-03-11 00:36:43,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:36:43,850 [ scc.git] DEBUG Calling 'git submodule update' 2025-03-11 00:36:43,895 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:36:43,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:36:43,900 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-03-11 00:36:43,945 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-03-11 00:36:43,952 [ scc.git] DEBUG has no local changes 2025-03-11 00:36:43,953 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#344 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/344/)' 2025-03-11 00:36:43,965 [ scc.git] DEBUG [detached HEAD 0dca5a4] merge master -Dorg -Ssuccess-only 2025-03-11 00:36:43,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-03-11 00:36:43,966 [ scc.repo] DEBUG ## PRs found: 2025-03-11 00:36:44,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:44,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-03-11 00:36:44,698 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:44,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-03-11 00:36:45,169 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:45,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-03-11 00:36:45,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:45,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-03-11 00:36:46,159 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:46,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-03-11 00:36:46,756 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:46,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:36:47,238 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:47,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-03-11 00:36:47,848 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:48,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-03-11 00:36:48,048 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-03-11 00:36:48,299 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:48,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-03-11 00:36:48,785 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:49,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-03-11 00:36:49,301 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:49,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-03-11 00:36:49,771 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:49,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-03-11 00:36:49,990 [ scc.repo] DEBUG ## Branches found: 2025-03-11 00:36:49,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-03-11 00:36:49,991 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:36:49,991 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:36:49,996 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-03-11 00:36:50,001 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-03-11 00:36:50,001 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-03-11 00:36:50,007 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-03-11 00:36:50,012 [ scc.git] DEBUG Already up to date. 2025-03-11 00:36:50,012 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-03-11 00:36:50,394 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-03-11 00:36:50,394 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-03-11 00:36:50,399 [ scc.git] DEBUG ## Unique users: [] 2025-03-11 00:36:50,399 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:36:50,399 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:36:50,405 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-03-11 00:36:50,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:36:50,417 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-03-11 00:36:50,429 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-03-11 00:36:50,430 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:36:50,433 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-03-11 00:36:50,433 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-03-11 00:36:50,434 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-03-11 00:36:50,436 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:50,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:36:50,611 [ scc.git] DEBUG Calling 'git submodule update' 2025-03-11 00:36:50,659 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:36:50,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:36:50,664 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-03-11 00:36:50,710 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-03-11 00:36:50,717 [ scc.git] DEBUG has no local changes 2025-03-11 00:36:50,717 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#344 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/344/)' 2025-03-11 00:36:50,726 [ scc.git] DEBUG [detached HEAD add0e50] merge master -Dorg -Ssuccess-only 2025-03-11 00:36:50,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-03-11 00:36:50,727 [ scc.repo] DEBUG ## PRs found: 2025-03-11 00:36:50,863 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:51,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-03-11 00:36:51,570 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:51,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/449 HTTP/1.1" 200 None 2025-03-11 00:36:52,113 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:52,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/449/comments HTTP/1.1" 200 None 2025-03-11 00:36:52,605 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:52,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e6c72898bd37920897ce8f06f3b28445d9d4ea88 HTTP/1.1" 200 None 2025-03-11 00:36:53,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:53,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e6c72898bd37920897ce8f06f3b28445d9d4ea88/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:36:53,622 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:53,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e6c72898bd37920897ce8f06f3b28445d9d4ea88/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:36:54,093 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:54,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e6c72898bd37920897ce8f06f3b28445d9d4ea88 HTTP/1.1" 200 None 2025-03-11 00:36:54,541 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:54,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/e6c72898bd37920897ce8f06f3b28445d9d4ea88?per_page=1 HTTP/1.1" 200 None 2025-03-11 00:36:54,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:55,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e6c72898bd37920897ce8f06f3b28445d9d4ea88 HTTP/1.1" 200 None 2025-03-11 00:36:55,467 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:55,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e6c72898bd37920897ce8f06f3b28445d9d4ea88/status HTTP/1.1" 200 None 2025-03-11 00:36:55,691 [ scc.repo] DEBUG - PR 449 will-moore 'getQueryString includes externalInfo' 2025-03-11 00:36:55,942 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:56,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/447 HTTP/1.1" 200 None 2025-03-11 00:36:56,421 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:56,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/447/comments HTTP/1.1" 200 None 2025-03-11 00:36:56,632 [ scc.repo] DEBUG # ... Include label: include 2025-03-11 00:36:56,884 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:57,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/84690ac11bf275bdc07d80dd74ff3fc8fc2577b1 HTTP/1.1" 200 None 2025-03-11 00:36:57,430 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:57,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/84690ac11bf275bdc07d80dd74ff3fc8fc2577b1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:36:57,940 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:58,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/84690ac11bf275bdc07d80dd74ff3fc8fc2577b1/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:36:58,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:58,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/84690ac11bf275bdc07d80dd74ff3fc8fc2577b1 HTTP/1.1" 200 None 2025-03-11 00:36:58,956 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:59,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/84690ac11bf275bdc07d80dd74ff3fc8fc2577b1?per_page=1 HTTP/1.1" 200 None 2025-03-11 00:36:59,392 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:36:59,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/84690ac11bf275bdc07d80dd74ff3fc8fc2577b1 HTTP/1.1" 200 None 2025-03-11 00:36:59,857 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:00,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/84690ac11bf275bdc07d80dd74ff3fc8fc2577b1/status HTTP/1.1" 200 None 2025-03-11 00:37:00,077 [ scc.repo] DEBUG - PR 447 jmuhlich 'Change ignoreExeptions default to empty tuple' 2025-03-11 00:37:00,328 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:00,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/445 HTTP/1.1" 200 None 2025-03-11 00:37:00,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:01,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/445/comments HTTP/1.1" 200 None 2025-03-11 00:37:01,305 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:01,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1b8c6f6bef2c3eb802692d41cb4f716af5644d10 HTTP/1.1" 200 None 2025-03-11 00:37:01,862 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:02,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1b8c6f6bef2c3eb802692d41cb4f716af5644d10/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:37:02,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:02,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1b8c6f6bef2c3eb802692d41cb4f716af5644d10/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:37:02,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:03,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1b8c6f6bef2c3eb802692d41cb4f716af5644d10 HTTP/1.1" 200 None 2025-03-11 00:37:03,549 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:03,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/1b8c6f6bef2c3eb802692d41cb4f716af5644d10?per_page=1 HTTP/1.1" 200 None 2025-03-11 00:37:03,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:04,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1b8c6f6bef2c3eb802692d41cb4f716af5644d10 HTTP/1.1" 200 None 2025-03-11 00:37:04,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:04,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/1b8c6f6bef2c3eb802692d41cb4f716af5644d10/status HTTP/1.1" 200 None 2025-03-11 00:37:04,630 [ scc.repo] DEBUG - PR 445 sbesson 'Remove numpy<2 capping' 2025-03-11 00:37:04,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:05,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/444 HTTP/1.1" 200 None 2025-03-11 00:37:05,366 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:05,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/4dbfb0b8633085571fc5317ee6189bbe39e3c8d4 HTTP/1.1" 200 None 2025-03-11 00:37:06,001 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:06,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/4dbfb0b8633085571fc5317ee6189bbe39e3c8d4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:37:06,507 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:06,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/4dbfb0b8633085571fc5317ee6189bbe39e3c8d4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:37:06,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:07,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/4dbfb0b8633085571fc5317ee6189bbe39e3c8d4 HTTP/1.1" 200 None 2025-03-11 00:37:07,423 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:07,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/4dbfb0b8633085571fc5317ee6189bbe39e3c8d4?per_page=1 HTTP/1.1" 200 None 2025-03-11 00:37:07,876 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:08,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/4dbfb0b8633085571fc5317ee6189bbe39e3c8d4 HTTP/1.1" 200 None 2025-03-11 00:37:08,337 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:08,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/4dbfb0b8633085571fc5317ee6189bbe39e3c8d4/status HTTP/1.1" 200 None 2025-03-11 00:37:08,535 [ scc.repo] DEBUG - PR 444 sbesson 'omero.util.populate_metadata: only log column types from HeaderResolver' 2025-03-11 00:37:08,786 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:09,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-03-11 00:37:09,301 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:09,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-03-11 00:37:09,553 [ scc.repo] DEBUG # ... 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Include label: include 2025-03-11 00:37:10,800 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:11,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2025-03-11 00:37:11,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:11,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:37:11,832 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:12,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:37:12,302 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:12,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2025-03-11 00:37:12,829 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:13,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None 2025-03-11 00:37:13,271 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:13,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2025-03-11 00:37:13,730 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:13,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None 2025-03-11 00:37:13,970 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation' 2025-03-11 00:37:14,222 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:14,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-03-11 00:37:14,695 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:14,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-03-11 00:37:15,163 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:15,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-03-11 00:37:15,709 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:15,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:37:16,206 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:16,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:37:16,711 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:16,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-03-11 00:37:17,249 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:17,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2025-03-11 00:37:17,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:17,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-03-11 00:37:18,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:18,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2025-03-11 00:37:18,347 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-03-11 00:37:18,599 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:18,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-03-11 00:37:19,065 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:19,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-03-11 00:37:19,532 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:19,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-03-11 00:37:20,063 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:20,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:37:20,572 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:20,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:37:21,057 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:21,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-03-11 00:37:21,572 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:21,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-03-11 00:37:22,101 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:22,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:37:22,646 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:22,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:37:23,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:23,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-03-11 00:37:23,676 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:23,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2025-03-11 00:37:24,233 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:24,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-03-11 00:37:24,699 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:24,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2025-03-11 00:37:24,901 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-03-11 00:37:25,152 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:25,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2025-03-11 00:37:25,381 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-03-11 00:37:25,632 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:25,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2025-03-11 00:37:26,107 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:26,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2025-03-11 00:37:26,568 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:26,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2025-03-11 00:37:27,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:27,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:37:27,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:27,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2025-03-11 00:37:28,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:28,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2025-03-11 00:37:28,348 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2025-03-11 00:37:28,600 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:28,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-03-11 00:37:29,103 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:29,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-03-11 00:37:29,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:29,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-03-11 00:37:30,157 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:30,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:37:30,702 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:30,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET 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api.github.com:443 2025-03-11 00:37:32,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2025-03-11 00:37:32,782 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-03-11 00:37:33,034 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:33,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2025-03-11 00:37:33,542 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:33,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2025-03-11 00:37:34,037 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:34,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-03-11 00:37:34,532 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:34,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-03-11 00:37:35,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:35,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2025-03-11 00:37:35,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:35,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:37:36,062 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:36,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a 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00:37:38,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:37:38,568 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:38,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2025-03-11 00:37:39,178 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:39,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2025-03-11 00:37:39,350 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2025-03-11 00:37:39,602 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:39,834 [urllib3.conn] DEBUG 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00:37:41,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2025-03-11 00:37:42,037 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:42,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2025-03-11 00:37:42,206 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2025-03-11 00:37:42,457 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:42,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-03-11 00:37:42,945 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:43,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-03-11 00:37:43,414 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:43,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-03-11 00:37:43,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:44,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:37:44,419 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:44,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-03-11 00:37:44,970 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:45,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-03-11 00:37:45,150 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-03-11 00:37:45,402 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:45,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2025-03-11 00:37:45,883 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:46,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2025-03-11 00:37:46,435 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:46,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2025-03-11 00:37:46,942 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:47,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2025-03-11 00:37:47,209 [ scc.repo] DEBUG ## Branches found: 2025-03-11 00:37:47,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-03-11 00:37:47,210 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:37:47,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:37:47,215 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-03-11 00:37:47,219 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-03-11 00:37:47,219 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-03-11 00:37:47,224 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-03-11 00:37:47,229 [ scc.git] DEBUG Already up to date. 2025-03-11 00:37:47,229 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-03-11 00:37:49,142 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-03-11 00:37:49,143 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-03-11 00:37:49,150 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2025-03-11 00:37:49,461 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-03-11 00:37:49,461 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2025-03-11 00:37:49,467 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2025-03-11 00:37:49,793 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-03-11 00:37:49,794 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2025-03-11 00:37:49,800 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2025-03-11 00:37:50,104 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-03-11 00:37:50,104 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2025-03-11 00:37:50,109 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-03-11 00:37:50,563 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-03-11 00:37:50,563 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-03-11 00:37:50,569 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2025-03-11 00:37:50,873 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-03-11 00:37:50,874 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2025-03-11 00:37:50,879 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-03-11 00:37:51,199 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-03-11 00:37:51,199 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-03-11 00:37:51,205 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-03-11 00:37:51,576 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-03-11 00:37:51,576 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-03-11 00:37:51,581 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head' 2025-03-11 00:37:52,288 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-03-11 00:37:52,289 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD 2025-03-11 00:37:52,294 [ scc.git] DEBUG Calling 'git fetch origin pull/444/head' 2025-03-11 00:37:52,856 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-03-11 00:37:52,856 [ scc.git] DEBUG * branch refs/pull/444/head -> FETCH_HEAD 2025-03-11 00:37:52,863 [ scc.git] DEBUG Calling 'git fetch origin pull/445/head' 2025-03-11 00:37:53,268 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-03-11 00:37:53,268 [ scc.git] DEBUG * branch refs/pull/445/head -> FETCH_HEAD 2025-03-11 00:37:53,274 [ scc.git] DEBUG Calling 'git fetch origin pull/447/head' 2025-03-11 00:37:53,868 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-03-11 00:37:53,868 [ scc.git] DEBUG * branch refs/pull/447/head -> FETCH_HEAD 2025-03-11 00:37:53,874 [ scc.git] DEBUG Calling 'git fetch origin pull/449/head' 2025-03-11 00:37:54,390 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-03-11 00:37:54,390 [ scc.git] DEBUG * branch refs/pull/449/head -> FETCH_HEAD 2025-03-11 00:37:54,395 [ scc.git] DEBUG ## Unique users: [] 2025-03-11 00:37:54,395 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:37:54,395 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:37:54,400 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-03-11 00:37:54,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:37:54,419 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-03-11 00:37:54,762 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-03-11 00:37:54,762 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-03-11 00:37:54,764 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:37:54,769 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-03-11 00:37:54,769 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-03-11 00:37:54,769 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-03-11 00:37:54,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:54,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:37:54,933 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2025-03-11 00:37:54,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:37:54,951 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2025-03-11 00:37:55,300 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-03-11 00:37:55,300 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2025-03-11 00:37:55,301 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:37:55,309 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2025-03-11 00:37:55,309 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2025-03-11 00:37:55,309 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2025-03-11 00:37:55,312 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:55,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:37:55,481 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2025-03-11 00:37:55,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:37:55,499 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2025-03-11 00:37:55,665 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2025-03-11 00:37:55,666 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:37:55,670 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2025-03-11 00:37:55,670 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2025-03-11 00:37:55,733 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:55,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:37:55,898 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2025-03-11 00:37:55,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:37:55,918 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2025-03-11 00:37:56,168 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2025-03-11 00:37:56,168 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2025-03-11 00:37:56,170 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:37:56,175 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2025-03-11 00:37:56,175 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2025-03-11 00:37:56,175 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2025-03-11 00:37:56,177 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:56,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:37:56,358 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-03-11 00:37:56,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:37:56,377 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-03-11 00:37:56,405 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:37:56,408 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-03-11 00:37:56,408 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-03-11 00:37:56,409 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-03-11 00:37:56,409 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-03-11 00:37:56,409 [ scc.git] DEBUG create mode 100644 connect.py 2025-03-11 00:37:56,610 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:56,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:37:56,773 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2025-03-11 00:37:56,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:37:56,791 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2025-03-11 00:37:56,935 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2025-03-11 00:37:56,937 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:37:56,941 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2025-03-11 00:37:56,941 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-03-11 00:37:57,025 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:57,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:37:57,192 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-03-11 00:37:57,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:37:57,211 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-03-11 00:37:57,311 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-03-11 00:37:57,312 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:37:57,317 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-03-11 00:37:57,317 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-03-11 00:37:57,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:57,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:37:57,607 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-03-11 00:37:57,623 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:37:57,628 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-03-11 00:37:57,740 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-03-11 00:37:57,741 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:37:57,749 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-03-11 00:37:57,749 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-03-11 00:37:57,859 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:58,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:37:58,020 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1' 2025-03-11 00:37:58,035 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:37:58,039 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1' 2025-03-11 00:37:58,161 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:37:58,164 [ scc.git] DEBUG .gitignore | 1 + 2025-03-11 00:37:58,165 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++----- 2025-03-11 00:37:58,165 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-) 2025-03-11 00:37:58,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:58,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:37:58,435 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4dbfb0b8633085571fc5317ee6189bbe39e3c8d4' 2025-03-11 00:37:58,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:37:58,457 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 444 (omero.util.populate_metadata: only log column types from HeaderResolver) 4dbfb0b8633085571fc5317ee6189bbe39e3c8d4' 2025-03-11 00:37:58,550 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:37:58,555 [ scc.git] DEBUG .github/workflows/codeql.yml | 48 +++++++++++++++++++++++++++++++++++++ 2025-03-11 00:37:58,555 [ scc.git] DEBUG src/omero/util/populate_metadata.py | 2 +- 2025-03-11 00:37:58,555 [ scc.git] DEBUG 2 files changed, 49 insertions(+), 1 deletion(-) 2025-03-11 00:37:58,555 [ scc.git] DEBUG create mode 100644 .github/workflows/codeql.yml 2025-03-11 00:37:58,688 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:58,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:37:58,860 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1b8c6f6bef2c3eb802692d41cb4f716af5644d10' 2025-03-11 00:37:58,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:37:58,879 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 445 (Remove numpy<2 capping) 1b8c6f6bef2c3eb802692d41cb4f716af5644d10' 2025-03-11 00:37:58,911 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:37:58,914 [ scc.git] DEBUG setup.py | 3 ++- 2025-03-11 00:37:58,914 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 1 deletion(-) 2025-03-11 00:37:59,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:59,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:37:59,269 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...84690ac11bf275bdc07d80dd74ff3fc8fc2577b1' 2025-03-11 00:37:59,284 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:37:59,288 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 447 (Change ignoreExeptions default to empty tuple) 84690ac11bf275bdc07d80dd74ff3fc8fc2577b1' 2025-03-11 00:37:59,642 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-03-11 00:37:59,644 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:37:59,653 [ scc.git] DEBUG src/omero/gateway/__init__.py | 2 +- 2025-03-11 00:37:59,653 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-03-11 00:37:59,656 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:37:59,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:37:59,822 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e6c72898bd37920897ce8f06f3b28445d9d4ea88' 2025-03-11 00:37:59,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:37:59,842 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 449 (getQueryString includes externalInfo) e6c72898bd37920897ce8f06f3b28445d9d4ea88' 2025-03-11 00:37:59,894 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-03-11 00:37:59,895 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:37:59,903 [ scc.git] DEBUG src/omero/gateway/__init__.py | 1 + 2025-03-11 00:37:59,903 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2025-03-11 00:38:00,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:00,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:38:00,233 [ scc.git] DEBUG Calling 'git submodule update' 2025-03-11 00:38:00,280 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:38:00,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:38:00,286 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-03-11 00:38:00,333 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-03-11 00:38:00,343 [ scc.git] DEBUG has no local changes 2025-03-11 00:38:00,343 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 427 Rdornier 'Add fileset folder creation' - PR 444 sbesson 'omero.util.populate_metadata: only log column types from HeaderResolver' - PR 445 sbesson 'Remove numpy<2 capping' - PR 447 jmuhlich 'Change ignoreExeptions default to empty tuple' - PR 449 will-moore 'getQueryString includes externalInfo' Generated by OMERO-python-superbuild-push#344 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/344/)' 2025-03-11 00:38:00,353 [ scc.git] DEBUG [detached HEAD b5ff3810] merge master -Dorg -Ssuccess-only 2025-03-11 00:38:00,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-03-11 00:38:00,354 [ scc.git] INFO Overriding base-branch from master to develop 2025-03-11 00:38:00,354 [ scc.repo] DEBUG ## PRs found: 2025-03-11 00:38:00,485 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:00,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-03-11 00:38:01,105 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:01,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-03-11 00:38:01,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:01,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-03-11 00:38:02,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:02,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-03-11 00:38:02,559 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:02,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:03,082 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:03,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:38:03,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:03,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-03-11 00:38:04,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:04,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-03-11 00:38:04,314 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-03-11 00:38:04,566 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:04,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-03-11 00:38:05,069 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:05,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-03-11 00:38:05,559 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:05,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-03-11 00:38:06,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:06,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:06,577 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:06,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-03-11 00:38:07,103 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:07,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-03-11 00:38:07,288 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-03-11 00:38:07,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:07,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-03-11 00:38:08,055 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:08,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-03-11 00:38:08,583 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:08,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-03-11 00:38:09,068 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:09,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-03-11 00:38:09,352 [ scc.repo] DEBUG ## Branches found: 2025-03-11 00:38:09,352 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-03-11 00:38:09,353 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:38:09,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:38:09,358 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-03-11 00:38:09,363 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-03-11 00:38:09,363 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-03-11 00:38:09,369 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-03-11 00:38:09,375 [ scc.git] DEBUG Already up to date. 2025-03-11 00:38:09,375 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-03-11 00:38:10,133 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-03-11 00:38:10,134 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-03-11 00:38:10,139 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-03-11 00:38:11,031 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-03-11 00:38:11,031 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-03-11 00:38:11,037 [ scc.git] DEBUG ## Unique users: [] 2025-03-11 00:38:11,037 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:38:11,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:38:11,042 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-03-11 00:38:11,049 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:38:11,054 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-03-11 00:38:11,123 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-03-11 00:38:11,124 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-03-11 00:38:11,124 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-03-11 00:38:11,129 [ scc.git] DEBUG Calling 'git reset --hard 4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-03-11 00:38:11,135 [ scc.git] DEBUG HEAD is now at 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2025-03-11 00:38:11,138 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:11,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:38:11,321 [ scc.git] DEBUG Calling 'git merge-base 4b4c755af4ccf8a5e709548d1f8415fab48a4867 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-03-11 00:38:11,329 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-03-11 00:38:11,335 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#344](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/344/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/344/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-03-11 00:38:11,339 [ scc.config] DEBUG Found github.token 2025-03-11 00:38:11,340 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-03-11 00:38:11,340 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-03-11 00:38:11,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:38:11,352 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-03-11 00:38:11,364 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:38:11,367 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-03-11 00:38:11,367 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-03-11 00:38:11,573 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:11,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:38:11,757 [ scc.git] DEBUG Calling 'git submodule update' 2025-03-11 00:38:11,805 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:38:11,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:38:11,810 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-03-11 00:38:11,857 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-03-11 00:38:11,863 [ scc.git] DEBUG has no local changes 2025-03-11 00:38:11,863 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#344 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/344/)' 2025-03-11 00:38:11,873 [ scc.git] DEBUG [detached HEAD c2a80a0] merge master -Dorg -Ssuccess-only 2025-03-11 00:38:11,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-03-11 00:38:11,874 [ scc.repo] DEBUG ## PRs found: 2025-03-11 00:38:12,009 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:12,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-03-11 00:38:12,670 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:12,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None 2025-03-11 00:38:13,188 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:13,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None 2025-03-11 00:38:13,649 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:13,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-03-11 00:38:14,196 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:14,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:14,666 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:14,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:38:15,136 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:15,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-03-11 00:38:15,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:15,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:16,064 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:16,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-03-11 00:38:16,524 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:16,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None 2025-03-11 00:38:16,732 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates' 2025-03-11 00:38:16,984 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:17,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-03-11 00:38:17,486 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:17,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-03-11 00:38:17,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:18,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-03-11 00:38:18,490 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:18,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-03-11 00:38:19,065 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:19,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:19,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:19,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:38:20,097 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:20,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-03-11 00:38:20,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:20,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:21,054 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:21,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-03-11 00:38:21,585 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:21,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-03-11 00:38:21,776 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-03-11 00:38:22,028 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:22,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/606 HTTP/1.1" 200 None 2025-03-11 00:38:22,516 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:22,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-03-11 00:38:23,047 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:23,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:23,563 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:23,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:38:24,101 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:24,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-03-11 00:38:24,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:24,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b360c3125f9471bf4001447f35c732507c2f2022?per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:25,091 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:25,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-03-11 00:38:25,548 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:25,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/status HTTP/1.1" 200 None 2025-03-11 00:38:25,749 [ scc.repo] DEBUG - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-03-11 00:38:26,000 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:26,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-03-11 00:38:26,481 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:26,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-03-11 00:38:27,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:27,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:27,515 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:27,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:38:28,027 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:28,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-03-11 00:38:28,487 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:28,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:28,939 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:29,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-03-11 00:38:29,470 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:29,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-03-11 00:38:29,664 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-03-11 00:38:29,915 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:30,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-03-11 00:38:30,167 [ scc.repo] DEBUG # ... Include label: include 2025-03-11 00:38:30,419 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:30,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-03-11 00:38:30,946 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:31,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:31,469 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:31,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:38:31,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:32,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-03-11 00:38:32,527 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:32,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:32,987 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:33,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-03-11 00:38:33,498 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:33,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-03-11 00:38:33,694 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-03-11 00:38:33,946 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:34,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-03-11 00:38:34,443 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:34,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-03-11 00:38:34,921 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:35,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-03-11 00:38:35,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:35,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:35,922 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:36,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:38:36,445 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:36,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-03-11 00:38:36,904 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:37,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:37,352 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:37,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-03-11 00:38:37,898 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:38,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-03-11 00:38:38,133 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-03-11 00:38:38,384 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:38,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-03-11 00:38:38,884 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:39,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-03-11 00:38:39,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:39,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-03-11 00:38:39,888 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:40,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:40,390 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:40,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:38:40,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:41,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-03-11 00:38:41,403 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:41,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:41,857 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:42,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-03-11 00:38:42,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:42,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-03-11 00:38:42,528 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-03-11 00:38:42,779 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:43,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-03-11 00:38:43,262 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:43,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-03-11 00:38:43,754 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:43,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-03-11 00:38:44,224 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:44,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-03-11 00:38:44,704 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:44,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-03-11 00:38:45,213 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:45,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:45,719 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:45,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:38:46,210 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:46,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-03-11 00:38:46,700 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:46,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:47,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:47,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-03-11 00:38:47,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:47,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2025-03-11 00:38:47,868 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-03-11 00:38:48,119 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:48,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-03-11 00:38:48,610 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:48,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-03-11 00:38:49,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:49,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-03-11 00:38:49,798 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:50,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:50,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:50,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:38:50,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:51,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-03-11 00:38:51,264 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:51,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-03-11 00:38:51,466 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-03-11 00:38:51,717 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:51,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-03-11 00:38:52,206 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:52,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-03-11 00:38:52,728 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:52,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-03-11 00:38:53,241 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:53,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-03-11 00:38:53,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:38:53,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-03-11 00:38:53,988 [ scc.repo] DEBUG ## Branches found: 2025-03-11 00:38:53,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-03-11 00:38:53,989 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:38:53,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:38:53,994 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-03-11 00:38:53,999 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-03-11 00:38:53,999 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-03-11 00:38:54,005 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-03-11 00:38:54,011 [ scc.git] DEBUG Already up to date. 2025-03-11 00:38:54,012 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-03-11 00:38:56,275 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-03-11 00:38:56,275 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-03-11 00:38:56,281 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-03-11 00:38:56,607 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-03-11 00:38:56,607 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-03-11 00:38:56,613 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-03-11 00:38:57,353 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-03-11 00:38:57,353 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-03-11 00:38:57,359 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-03-11 00:38:58,118 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-03-11 00:38:58,118 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-03-11 00:38:58,124 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-03-11 00:38:58,541 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-03-11 00:38:58,542 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-03-11 00:38:58,547 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-03-11 00:38:59,413 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-03-11 00:38:59,414 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-03-11 00:38:59,419 [ scc.git] DEBUG Calling 'git fetch origin pull/606/head' 2025-03-11 00:38:59,757 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-03-11 00:38:59,757 [ scc.git] DEBUG * branch refs/pull/606/head -> FETCH_HEAD 2025-03-11 00:38:59,763 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-03-11 00:39:00,238 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-03-11 00:39:00,238 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-03-11 00:39:00,244 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head' 2025-03-11 00:39:00,747 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-03-11 00:39:00,747 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD 2025-03-11 00:39:00,753 [ scc.git] DEBUG ## Unique users: [] 2025-03-11 00:39:00,753 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:39:00,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:39:00,760 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-03-11 00:39:00,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:39:00,774 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-03-11 00:39:00,899 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-03-11 00:39:00,900 [ scc.git] DEBUG Auto-merging setup.py 2025-03-11 00:39:00,901 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:39:00,906 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-03-11 00:39:00,906 [ scc.git] DEBUG setup.py | 1 + 2025-03-11 00:39:00,906 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-03-11 00:39:00,910 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:39:01,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:39:01,088 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-03-11 00:39:01,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:39:01,104 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-03-11 00:39:01,195 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-03-11 00:39:01,195 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-03-11 00:39:01,196 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:39:01,202 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-03-11 00:39:01,202 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-03-11 00:39:01,202 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-03-11 00:39:01,340 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:39:01,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:39:01,520 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-03-11 00:39:01,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:39:01,536 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-03-11 00:39:01,633 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:39:01,638 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-03-11 00:39:01,638 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-03-11 00:39:01,773 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:39:01,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:39:01,952 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-03-11 00:39:01,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:39:01,968 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-03-11 00:39:02,044 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:39:02,048 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-03-11 00:39:02,048 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-03-11 00:39:02,204 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:39:02,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:39:02,362 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-03-11 00:39:02,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:39:02,378 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-03-11 00:39:02,651 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:39:02,660 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-03-11 00:39:02,661 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-03-11 00:39:02,661 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-03-11 00:39:02,661 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-03-11 00:39:02,661 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-03-11 00:39:02,661 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-03-11 00:39:02,661 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-03-11 00:39:02,661 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-03-11 00:39:02,661 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-03-11 00:39:02,661 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-03-11 00:39:02,661 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-03-11 00:39:02,662 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-03-11 00:39:02,663 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:39:02,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:39:02,827 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-03-11 00:39:02,838 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:39:02,843 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-03-11 00:39:02,917 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-03-11 00:39:02,918 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:39:02,926 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-03-11 00:39:02,926 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-03-11 00:39:02,926 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-03-11 00:39:02,926 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-03-11 00:39:03,079 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:39:03,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:39:03,241 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b360c3125f9471bf4001447f35c732507c2f2022' 2025-03-11 00:39:03,252 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:39:03,258 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 606 (Fix issues related to images with very high channel count) b360c3125f9471bf4001447f35c732507c2f2022' 2025-03-11 00:39:03,326 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:39:03,332 [ scc.git] DEBUG .../webgateway/static/webgateway/js/ome.viewport.js | 17 +++++++++++++++-- 2025-03-11 00:39:03,332 [ scc.git] DEBUG 1 file changed, 15 insertions(+), 2 deletions(-) 2025-03-11 00:39:03,493 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:39:03,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:39:03,657 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-03-11 00:39:03,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:39:03,673 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-03-11 00:39:03,700 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:39:03,705 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-03-11 00:39:03,705 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-03-11 00:39:03,705 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-03-11 00:39:03,909 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:39:04,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:39:04,081 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-03-11 00:39:04,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:39:04,098 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-03-11 00:39:04,123 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-03-11 00:39:04,126 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++---------------------------- 2025-03-11 00:39:04,126 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-) 2025-03-11 00:39:04,333 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:39:04,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:39:04,500 [ scc.git] DEBUG Calling 'git submodule update' 2025-03-11 00:39:04,549 [ scc.git] DEBUG Get sha1 of %s 2025-03-11 00:39:04,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-03-11 00:39:04,554 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-03-11 00:39:04,599 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-03-11 00:39:04,610 [ scc.git] DEBUG has no local changes 2025-03-11 00:39:04,610 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 613 will-moore 'Add /webclient/extinfo/image/ID/ for extInfo as JSON' (stage: draft) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 614 sbesson 'CodeQL workflow updates' Generated by OMERO-python-superbuild-push#344 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/344/)' 2025-03-11 00:39:04,624 [ scc.git] DEBUG [detached HEAD 792b07b15] merge master -Dorg -Ssuccess-only 2025-03-11 00:39:04,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-03-11 00:39:04,624 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-03-11 00:39:04,682 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-03-11 00:39:04,751 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:39:04,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:39:04,933 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-03-11 00:39:05,171 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:39:05,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:39:05,349 [ scc.config] DEBUG Found submodule.omero-py.url 2025-03-11 00:39:05,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:39:05,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:39:05,852 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-03-11 00:39:06,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:39:06,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:39:06,268 [ scc.config] DEBUG Found submodule.omero-web.url 2025-03-11 00:39:06,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-03-11 00:39:06,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-03-11 00:39:06,675 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-03-11 00:39:06,714 [ scc.git] DEBUG has local changes 2025-03-11 00:39:06,715 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 427 Rdornier 'Add fileset folder creation' - PR 444 sbesson 'omero.util.populate_metadata: only log column types from HeaderResolver' - PR 445 sbesson 'Remove numpy<2 capping' - PR 447 jmuhlich 'Change ignoreExeptions default to empty tuple' - PR 449 will-moore 'getQueryString includes externalInfo' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 613 will-moore 'Add /webclient/extinfo/image/ID/ for extInfo as JSON' (stage: draft) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 614 sbesson 'CodeQL workflow updates' Generated by OMERO-python-superbuild-push#344 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/344/)' 2025-03-11 00:39:06,726 [ scc.git] DEBUG [detached HEAD 40bc2ed] merge master -Dorg -Ssuccess-only 2025-03-11 00:39:06,727 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-03-11 00:39:06,727 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-03-11 00:39:06,727 [ scc.merge] INFO Already up to date. 2025-03-11 00:39:06,727 [ scc.merge] INFO 2025-03-11 00:39:06,727 [ scc.merge] INFO 2025-03-11 00:39:06,727 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-03-11 00:39:06,727 [ scc.merge] INFO Already up to date. 2025-03-11 00:39:06,727 [ scc.merge] INFO 2025-03-11 00:39:06,727 [ scc.merge] INFO Merged PRs: 2025-03-11 00:39:06,727 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-03-11 00:39:06,727 [ scc.merge] INFO 2025-03-11 00:39:06,727 [ scc.merge] INFO Repository: ome/omero-marshal 2025-03-11 00:39:06,727 [ scc.merge] INFO Excluded PRs: 2025-03-11 00:39:06,727 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-03-11 00:39:06,727 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-03-11 00:39:06,727 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-03-11 00:39:06,727 [ scc.merge] INFO Already up to date. 2025-03-11 00:39:06,727 [ scc.merge] INFO 2025-03-11 00:39:06,727 [ scc.merge] INFO Merged PRs: 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-03-11 00:39:06,728 [ scc.merge] INFO 2025-03-11 00:39:06,728 [ scc.merge] INFO Repository: ome/omero-py 2025-03-11 00:39:06,728 [ scc.merge] INFO Excluded PRs: 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2025-03-11 00:39:06,728 [ scc.merge] INFO Already up to date. 2025-03-11 00:39:06,728 [ scc.merge] INFO 2025-03-11 00:39:06,728 [ scc.merge] INFO Merged PRs: 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation' 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 444 sbesson 'omero.util.populate_metadata: only log column types from HeaderResolver' 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 445 sbesson 'Remove numpy<2 capping' 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 447 jmuhlich 'Change ignoreExeptions default to empty tuple' 2025-03-11 00:39:06,728 [ scc.merge] INFO - PR 449 will-moore 'getQueryString includes externalInfo' 2025-03-11 00:39:06,729 [ scc.merge] INFO 2025-03-11 00:39:06,729 [ scc.merge] INFO Repository: ome/omero-scripts 2025-03-11 00:39:06,729 [ scc.merge] INFO Excluded PRs: 2025-03-11 00:39:06,729 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-03-11 00:39:06,729 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-03-11 00:39:06,729 [ scc.merge] INFO Already up to date. 2025-03-11 00:39:06,729 [ scc.merge] INFO 2025-03-11 00:39:06,729 [ scc.merge] INFO Merged PRs: 2025-03-11 00:39:06,729 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-03-11 00:39:06,729 [ scc.merge] INFO 2025-03-11 00:39:06,729 [ scc.merge] INFO Conflicting PRs (not included): 2025-03-11 00:39:06,729 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-03-11 00:39:06,729 [ scc.merge] INFO 2025-03-11 00:39:06,729 [ scc.merge] INFO Repository: ome/omero-web 2025-03-11 00:39:06,729 [ scc.merge] INFO Excluded PRs: 2025-03-11 00:39:06,729 [ scc.merge] INFO - PR 613 will-moore 'Add /webclient/extinfo/image/ID/ for extInfo as JSON' (stage: draft) 2025-03-11 00:39:06,729 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-03-11 00:39:06,729 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2025-03-11 00:39:06,729 [ scc.merge] INFO Already up to date. 2025-03-11 00:39:06,729 [ scc.merge] INFO 2025-03-11 00:39:06,729 [ scc.merge] INFO Merged PRs: 2025-03-11 00:39:06,729 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-03-11 00:39:06,729 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-03-11 00:39:06,729 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-03-11 00:39:06,729 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-03-11 00:39:06,729 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-03-11 00:39:06,729 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-03-11 00:39:06,729 [ scc.merge] INFO - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-03-11 00:39:06,729 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-03-11 00:39:06,729 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates' 2025-03-11 00:39:06,730 [ scc.merge] INFO 2025-03-11 00:39:06,730 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-03-11 00:39:06,730 [ scc.git] DEBUG Calling 'git remote' 2025-03-11 00:39:06,736 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-03-11 00:39:06,737 [ scc.git] DEBUG Calling 'git remote' 2025-03-11 00:39:06,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-03-11 00:39:06,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-03-11 00:39:06,742 [ scc.git] DEBUG Calling 'git remote' 2025-03-11 00:39:06,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-03-11 00:39:06,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-03-11 00:39:06,747 [ scc.git] DEBUG Calling 'git remote' 2025-03-11 00:39:06,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-03-11 00:39:06,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-03-11 00:39:06,752 [ scc.git] DEBUG Calling 'git remote' 2025-03-11 00:39:06,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-03-11 00:39:06,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-03-11 00:39:06,756 [ scc.git] DEBUG Calling 'git remote' 2025-03-11 00:39:06,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 05d52412 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 4b979f847 nothing to commit, working tree clean HEAD detached from 1c829a1 nothing to commit, working tree clean 2025-03-11 00:39:35,964 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS