Started by upstream project "Trigger" build number 3
originally caused by:
 Started by user devspace
Running as SYSTEM
Building remotely on omero (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-server
[OMERO-server] $ /bin/bash -xe /tmp/jenkins15386582388157533021.sh
+ source /home/settings.env
++ OMERO_DB_HOST=pg
++ OMERO_DB_USER=postgres
++ OMERO_DB_PASS=
++ OMERO_ROOT_PASS=omero
++ OMERO_DATA_DIR=/OMERO
++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
+ OMERO_DB_NAME=OMERO-server
+ OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
+ export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
+ OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
+ OMERO_DATA_DIR=/home/omero/omero-server-data
+ '[' -e /home/omero/workspace/OMERO-server/OMERO.server ']'
+ rm -rf /home/omero/workspace/OMERO-server/.venv3
+ python3.11 -m venv /home/omero/workspace/OMERO-server/.venv3
+ '[' false = true ']'
+ echo 'Skipping PURGE_DATA:CleanDbAndRepo'
Skipping PURGE_DATA:CleanDbAndRepo
+ rm -rf '/home/omero/workspace/OMERO-server/*'
Copied 1 artifact from "OMERO-build" build number 1
Copied 5 artifacts from "OMERO-python-superbuild-build" build number 1
Copied 2 artifacts from "OMERO-build-build" build number 4
[OMERO-server] $ /bin/bash -xe /tmp/jenkins18148053956739660956.sh
+ source /home/settings.env
++ OMERO_DB_HOST=pg
++ OMERO_DB_USER=postgres
++ OMERO_DB_PASS=
++ OMERO_ROOT_PASS=omero
++ OMERO_DATA_DIR=/OMERO
++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
+ OMERO_DB_NAME=OMERO-server
+ OMERO_DATA_DIR=/home/omero/omero-server-data
+ mkdir -p /home/omero/omero-server-data
+ OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
+ export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
+ OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
+ export ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
+ ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
+ export VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
+ VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
++ ls OMERO.server-5.6.3-576-82ef22269e-ice36-b1.zip
+ ZIP=OMERO.server-5.6.3-576-82ef22269e-ice36-b1.zip
+ '[' '!' -z '' ']'
+ DIST=OMERO.server-5.6.3-576-82ef22269e-ice36-b1
+ unzip OMERO.server-5.6.3-576-82ef22269e-ice36-b1.zip
Archive:  OMERO.server-5.6.3-576-82ef22269e-ice36-b1.zip
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   creating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/etc/grid/
   creating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/etc/profiles/
   creating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/etc/templates/
   creating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/etc/templates/error/
   creating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/etc/templates/grid/
   creating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/lib/
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   creating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/lib/scripts/omero/util_scripts/
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  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/share/licenses/iconsweets_license.txt  
  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/share/licenses/jamon.txt  
  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/share/licenses/jmock.txt  
  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/share/licenses/jquery.txt  
  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/share/licenses/jtidy.txt  
  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/share/licenses/lgpl-3.0.txt  
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  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/share/licenses/matplotlib.txt  
  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/share/licenses/mit.txt  
  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/share/licenses/mpl-v1_0.htm  
  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/share/licenses/npl-1_1.txt  
  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/share/licenses/path.txt  
  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/share/licenses/pil.txt  
  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/share/licenses/postgresql.txt  
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  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/sql/README.txt  
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  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py  
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  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql  
  inflating: OMERO.server-5.6.3-576-82ef22269e-ice36-b1/sql/psql/OMERO5.3__0/delete-ns-orphans.sql  
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+ rm -f OMERO.server-5.6.3-576-82ef22269e-ice36-b1.zip
+ mv /home/omero/workspace/OMERO-server/OMERO.server-5.6.3-576-82ef22269e-ice36-b1 /home/omero/workspace/OMERO-server/OMERO.server
+ source /home/omero/workspace/OMERO-server/.venv3/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(.venv3) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(.venv3) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ pip install -U pip
Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (22.3.1)
Collecting pip
  Downloading pip-25.3-py3-none-any.whl (1.8 MB)
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Installing collected packages: pip
  Attempting uninstall: pip
    Found existing installation: pip 22.3.1
    Uninstalling pip-22.3.1:
      Successfully uninstalled pip-22.3.1
Successfully installed pip-25.3
+ pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
Collecting zeroc-ice==3.6.5
  Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
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Installing collected packages: zeroc-ice
Successfully installed zeroc-ice-3.6.5
+ pip install markdown
Collecting markdown
  Downloading markdown-3.10-py3-none-any.whl.metadata (5.1 kB)
Downloading markdown-3.10-py3-none-any.whl (107 kB)
Installing collected packages: markdown
Successfully installed markdown-3.10
+ pip install reportlab
Collecting reportlab
  Downloading reportlab-4.4.6-py3-none-any.whl.metadata (1.7 kB)
Collecting pillow>=9.0.0 (from reportlab)
  Downloading pillow-12.0.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (8.8 kB)
Collecting charset-normalizer (from reportlab)
  Downloading charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB)
Downloading reportlab-4.4.6-py3-none-any.whl (2.0 MB)
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Downloading pillow-12.0.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (7.0 MB)
   ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 7.0/7.0 MB 23.2 MB/s  0:00:00
Downloading charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB)
Installing collected packages: pillow, charset-normalizer, reportlab

Successfully installed charset-normalizer-3.4.4 pillow-12.0.0 reportlab-4.4.6
+ pip install omego
Collecting omego
  Downloading omego-0.7.0.tar.gz (31 kB)
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Collecting future (from omego)
  Downloading future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting yaclifw>=0.1.1 (from omego)
  Downloading yaclifw-0.2.0.tar.gz (13 kB)
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Collecting six (from yaclifw>=0.1.1->omego)
  Downloading six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Downloading future-1.0.0-py3-none-any.whl (491 kB)
Downloading six-1.17.0-py2.py3-none-any.whl (11 kB)
Building wheels for collected packages: omego, yaclifw
  Building wheel for omego (pyproject.toml): started
  Building wheel for omego (pyproject.toml): finished with status 'done'
  Created wheel for omego: filename=omego-0.7.0-py3-none-any.whl size=35933 sha256=a66ca447ff67d7fa142b991e2b4900387ca67f43ce3b4b259b14eb83611e2c5a
  Stored in directory: /home/omero/.cache/pip/wheels/b2/03/f4/41da37f9fd03492f25c76713ad3afb5039979f91de90c3cea4
  Building wheel for yaclifw (pyproject.toml): started
  Building wheel for yaclifw (pyproject.toml): finished with status 'done'
  Created wheel for yaclifw: filename=yaclifw-0.2.0-py3-none-any.whl size=14689 sha256=c90cefc1546ee439741600094c32e6c2ffe8c7a90646dd5618d3c54bd17b1a96
  Stored in directory: /home/omero/.cache/pip/wheels/65/14/90/3ee93d92964646dc1f6990630191b41765be2582811bce72ac
Successfully built omego yaclifw
Installing collected packages: six, future, yaclifw, omego

Successfully installed future-1.0.0 omego-0.7.0 six-1.17.0 yaclifw-0.2.0
+ pip install tables
Collecting tables
  Downloading tables-3.10.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.0 kB)
Collecting numpy>=1.20.0 (from tables)
  Downloading numpy-2.3.5-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (62 kB)
Collecting numexpr>=2.6.2 (from tables)
  Downloading numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.0 kB)
Collecting packaging (from tables)
  Downloading packaging-25.0-py3-none-any.whl.metadata (3.3 kB)
Collecting py-cpuinfo (from tables)
  Downloading py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes)
Collecting blosc2>=2.3.0 (from tables)
  Downloading blosc2-3.12.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (7.1 kB)
Collecting typing-extensions>=4.4.0 (from tables)
  Downloading typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
Collecting ndindex (from blosc2>=2.3.0->tables)
  Downloading ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (3.6 kB)
Collecting msgpack (from blosc2>=2.3.0->tables)
  Downloading msgpack-1.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.1 kB)
Collecting platformdirs (from blosc2>=2.3.0->tables)
  Downloading platformdirs-4.5.1-py3-none-any.whl.metadata (12 kB)
Collecting requests (from blosc2>=2.3.0->tables)
  Downloading requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->blosc2>=2.3.0->tables) (3.4.4)
Collecting idna<4,>=2.5 (from requests->blosc2>=2.3.0->tables)
  Downloading idna-3.11-py3-none-any.whl.metadata (8.4 kB)
Collecting urllib3<3,>=1.21.1 (from requests->blosc2>=2.3.0->tables)
  Downloading urllib3-2.6.2-py3-none-any.whl.metadata (6.6 kB)
Collecting certifi>=2017.4.17 (from requests->blosc2>=2.3.0->tables)
  Downloading certifi-2025.11.12-py3-none-any.whl.metadata (2.5 kB)
Downloading tables-3.10.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (7.5 MB)
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Downloading blosc2-3.12.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (4.5 MB)
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Downloading numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (442 kB)
Downloading numpy-2.3.5-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
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Downloading typing_extensions-4.15.0-py3-none-any.whl (44 kB)
Downloading msgpack-1.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (426 kB)
Downloading ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (516 kB)
Downloading packaging-25.0-py3-none-any.whl (66 kB)
Downloading platformdirs-4.5.1-py3-none-any.whl (18 kB)
Downloading py_cpuinfo-9.0.0-py3-none-any.whl (22 kB)
Downloading requests-2.32.5-py3-none-any.whl (64 kB)
Downloading idna-3.11-py3-none-any.whl (71 kB)
Downloading urllib3-2.6.2-py3-none-any.whl (131 kB)
Downloading certifi-2025.11.12-py3-none-any.whl (159 kB)
Installing collected packages: py-cpuinfo, urllib3, typing-extensions, platformdirs, packaging, numpy, ndindex, msgpack, idna, certifi, requests, numexpr, blosc2, tables

Successfully installed blosc2-3.12.2 certifi-2025.11.12 idna-3.11 msgpack-1.1.2 ndindex-1.10.1 numexpr-2.14.1 numpy-2.3.5 packaging-25.0 platformdirs-4.5.1 py-cpuinfo-9.0.0 requests-2.32.5 tables-3.10.2 typing-extensions-4.15.0 urllib3-2.6.2
+ pip install jinja2
Collecting jinja2
  Downloading jinja2-3.1.6-py3-none-any.whl.metadata (2.9 kB)
Collecting MarkupSafe>=2.0 (from jinja2)
  Downloading markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.7 kB)
Downloading jinja2-3.1.6-py3-none-any.whl (134 kB)
Downloading markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (22 kB)
Installing collected packages: MarkupSafe, jinja2

Successfully installed MarkupSafe-3.0.3 jinja2-3.1.6
+ pip install omero-py
Collecting omero-py
  Downloading omero_py-5.21.3-py3-none-any.whl.metadata (6.5 kB)
Collecting appdirs (from omero-py)
  Downloading appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py) (1.0.0)
Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.3.5)
Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (12.0.0)
Collecting PyYAML (from omero-py)
  Downloading pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (3.6.5)
Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.32.5)
Collecting portalocker (from omero-py)
  Downloading portalocker-3.2.0-py3-none-any.whl.metadata (8.7 kB)
Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.4.4)
Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.11)
Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2.6.2)
Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2025.11.12)
Downloading omero_py-5.21.3-py3-none-any.whl (2.8 MB)
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Downloading appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
Downloading portalocker-3.2.0-py3-none-any.whl (22 kB)
Downloading pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
   ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 806.6/806.6 kB 20.3 MB/s  0:00:00
Installing collected packages: appdirs, PyYAML, portalocker, omero-py

Successfully installed PyYAML-6.0.3 appdirs-1.4.4 omero-py-5.21.3 portalocker-3.2.0
+ pip install git+https://github.com/snoopycrimecop/omero-metadata.git@merge_ci#egg=omero-metadata
Collecting omero-metadata
  Cloning https://github.com/snoopycrimecop/omero-metadata.git (to revision merge_ci) to /tmp/pip-install-ftfdg2z6/omero-metadata_cd72e6f6e7e342b1911f65c3f606187e
  Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-metadata.git /tmp/pip-install-ftfdg2z6/omero-metadata_cd72e6f6e7e342b1911f65c3f606187e
  Resolved https://github.com/snoopycrimecop/omero-metadata.git to commit 55360552a4c7ee5a639da7e23376fa6008d4322d
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (5.21.3)
Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (6.0.3)
Requirement already satisfied: jinja2 in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (3.1.6)
Collecting pandas (from omero-metadata)
  Downloading pandas-2.3.3-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (91 kB)
Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (1.4.4)
Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (1.0.0)
Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (2.3.5)
Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (12.0.0)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (3.6.5)
Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (2.32.5)
Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (3.2.0)
Requirement already satisfied: MarkupSafe>=2.0 in ./.venv3/lib64/python3.11/site-packages (from jinja2->omero-metadata) (3.0.3)
Collecting python-dateutil>=2.8.2 (from pandas->omero-metadata)
  Downloading python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB)
Collecting pytz>=2020.1 (from pandas->omero-metadata)
  Downloading pytz-2025.2-py2.py3-none-any.whl.metadata (22 kB)
Collecting tzdata>=2022.7 (from pandas->omero-metadata)
  Downloading tzdata-2025.3-py2.py3-none-any.whl.metadata (1.4 kB)
Requirement already satisfied: six>=1.5 in ./.venv3/lib64/python3.11/site-packages (from python-dateutil>=2.8.2->pandas->omero-metadata) (1.17.0)
Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.4.4)
Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.11)
Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2.6.2)
Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2025.11.12)
Downloading pandas-2.3.3-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (12.8 MB)
   ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 12.8/12.8 MB 23.3 MB/s  0:00:00
Downloading python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB)
Downloading pytz-2025.2-py2.py3-none-any.whl (509 kB)
Downloading tzdata-2025.3-py2.py3-none-any.whl (348 kB)
Building wheels for collected packages: omero-metadata
  Building wheel for omero-metadata (pyproject.toml): started
  Building wheel for omero-metadata (pyproject.toml): finished with status 'done'
  Created wheel for omero-metadata: filename=omero_metadata-0.13.1.dev0-py3-none-any.whl size=39282 sha256=98d3b3f0199b275c1532e6bfb4234b83f11ea56bde64e25d6ee0514ece71d237
  Stored in directory: /tmp/pip-ephem-wheel-cache-edmxp4rk/wheels/6b/49/26/d56ff0fc3b918823c05ff86cc0686c3a577289ddc39151269b
Successfully built omero-metadata
Installing collected packages: pytz, tzdata, python-dateutil, pandas, omero-metadata

Successfully installed omero-metadata-0.13.1.dev0 pandas-2.3.3 python-dateutil-2.9.0.post0 pytz-2025.2 tzdata-2025.3
+ pip install git+https://github.com/snoopycrimecop/omero-cli-render.git@merge_ci#egg=omero-cli-render
Collecting omero-cli-render
  Cloning https://github.com/snoopycrimecop/omero-cli-render.git (to revision merge_ci) to /tmp/pip-install-_x30ihyc/omero-cli-render_b9c096f8580543b4848e940baf5170eb
  Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-render.git /tmp/pip-install-_x30ihyc/omero-cli-render_b9c096f8580543b4848e940baf5170eb
  Running command git checkout -b merge_ci --track origin/merge_ci
  Switched to a new branch 'merge_ci'
  branch 'merge_ci' set up to track 'origin/merge_ci'.
  Resolved https://github.com/snoopycrimecop/omero-cli-render.git to commit 907b17fcd50e173beaad4eca82cee6da42015710
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-cli-render) (6.0.3)
Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-render) (5.21.3)
Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.4.4)
Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.0.0)
Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.3.5)
Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (12.0.0)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.6.5)
Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.32.5)
Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.2.0)
Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.4.4)
Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.11)
Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2.6.2)
Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2025.11.12)
Building wheels for collected packages: omero-cli-render
  Building wheel for omero-cli-render (pyproject.toml): started
  Building wheel for omero-cli-render (pyproject.toml): finished with status 'done'
  Created wheel for omero-cli-render: filename=omero_cli_render-0.8.2.dev0-py3-none-any.whl size=19840 sha256=b10e73bb763ba278e5b4f5729827a31b56c57ee8546d17c31d7b109f1095362f
  Stored in directory: /tmp/pip-ephem-wheel-cache-v1qq4cj8/wheels/cc/67/86/ff54ee10a8ea8ae7a21cceb878741010ef1de4a7d93df129ee
Successfully built omero-cli-render
Installing collected packages: omero-cli-render
Successfully installed omero-cli-render-0.8.2.dev0
+ pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate
Collecting omero-cli-duplicate
  Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-pi3icide/omero-cli-duplicate_af78aa4af3c8441596b05fb59d6859e3
  Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-pi3icide/omero-cli-duplicate_af78aa4af3c8441596b05fb59d6859e3
  Running command git checkout -b merge_ci --track origin/merge_ci
  Switched to a new branch 'merge_ci'
  branch 'merge_ci' set up to track 'origin/merge_ci'.
  Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit 96bebeac456f9d52fcbfd37e3a4d803ef81dbb4e
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-duplicate) (5.21.3)
Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4)
Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0)
Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.3.5)
Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (12.0.0)
Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.3)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5)
Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.32.5)
Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.2.0)
Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.4.4)
Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.11)
Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2.6.2)
Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2025.11.12)
Building wheels for collected packages: omero-cli-duplicate
  Building wheel for omero-cli-duplicate (pyproject.toml): started
  Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done'
  Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11541 sha256=a35a6c598aaa27f4a2e378b6528022159008eb7fecdf1bf41bc4ffe1a96faeca
  Stored in directory: /tmp/pip-ephem-wheel-cache-n8pl_377/wheels/28/e4/77/20667ec1be487a1994d60f59ce11eeba2ac0c8c34aea209b46
Successfully built omero-cli-duplicate
Installing collected packages: omero-cli-duplicate
Successfully installed omero-cli-duplicate-0.4.1.dev0
+ pip install omero-certificates
Collecting omero-certificates
  Downloading omero_certificates-0.4.0-py3-none-any.whl.metadata (3.3 kB)
Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-certificates) (5.21.3)
Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4)
Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0)
Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.3.5)
Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (12.0.0)
Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.3)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5)
Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.32.5)
Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.2.0)
Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.4.4)
Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.11)
Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2.6.2)
Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2025.11.12)
Downloading omero_certificates-0.4.0-py3-none-any.whl (11 kB)
Installing collected packages: omero-certificates
Successfully installed omero-certificates-0.4.0
+ for x in *.tar.gz
+ pip install -U omero_dropbox-5.7.1.dev0.tar.gz
Processing ./omero_dropbox-5.7.1.dev0.tar.gz
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: omero-py in ./.venv3/lib64/python3.11/site-packages (from omero-dropbox==5.7.1.dev0) (5.21.3)
Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.3.5)
Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (12.0.0)
Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.3)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.32.5)
Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.2.0)
Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.4)
Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.11)
Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.6.2)
Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2025.11.12)
Building wheels for collected packages: omero-dropbox
  Building wheel for omero-dropbox (pyproject.toml): started
  Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
  Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49138 sha256=9b80df2b52ed47e64c2246bd25427a54269a667376220a2e4e2b5658cd7e8956
  Stored in directory: /home/omero/.cache/pip/wheels/97/54/5f/8dccf5c24b891c9bef25978dac72ee622eda35946855e06c92
Successfully built omero-dropbox
Installing collected packages: omero-dropbox
Successfully installed omero-dropbox-5.7.1.dev0
+ for x in *.tar.gz
+ pip install -U omero_marshal-0.9.2.dev0.tar.gz
Processing ./omero_marshal-0.9.2.dev0.tar.gz
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Building wheels for collected packages: omero_marshal
  Building wheel for omero_marshal (pyproject.toml): started
  Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
  Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88122 sha256=9fe624099e575e04a7f3a428d322ea18288b6fb31b60d285a6af041f2b54d742
  Stored in directory: /home/omero/.cache/pip/wheels/38/19/f8/b7cbc5aa44dc10bd3c24777f40a22cf6ed1baeac622bbf8230
Successfully built omero_marshal
Installing collected packages: omero_marshal
Successfully installed omero_marshal-0.9.2.dev0
+ for x in *.tar.gz
+ pip install -U omero_py-5.22.0.dev0.tar.gz
Processing ./omero_py-5.22.0.dev0.tar.gz
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (1.4.4)
Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (1.0.0)
Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (2.3.5)
Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (12.0.0)
Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (6.0.3)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (3.6.5)
Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (2.32.5)
Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (3.2.0)
Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (3.4.4)
Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (3.11)
Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (2.6.2)
Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (2025.11.12)
Building wheels for collected packages: omero-py
  Building wheel for omero-py (pyproject.toml): started
  Building wheel for omero-py (pyproject.toml): finished with status 'done'
  Created wheel for omero-py: filename=omero_py-5.22.0.dev0-py3-none-any.whl size=2786250 sha256=21dd5645f63395c80952fee84b011e53f1d0cae7f6283da81470bc6400d70aca
  Stored in directory: /home/omero/.cache/pip/wheels/b2/dd/fb/0f3c8a08eddbfe6a2bff7fe7d61ee876973c474d282bc441e3
Successfully built omero-py
Installing collected packages: omero-py
  Attempting uninstall: omero-py
    Found existing installation: omero-py 5.21.3
    Uninstalling omero-py-5.21.3:
      Successfully uninstalled omero-py-5.21.3
Successfully installed omero-py-5.22.0.dev0
+ for x in *.tar.gz
+ pip install -U omero_scripts-5.9.2.dev0.tar.gz
Processing ./omero_scripts-5.9.2.dev0.tar.gz
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Building wheels for collected packages: omero-scripts
  Building wheel for omero-scripts (pyproject.toml): started
  Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
  Created wheel for omero-scripts: filename=omero_scripts-5.9.2.dev0-py3-none-any.whl size=136991 sha256=a1cfb37d71aaf1c4eeab1be12fdf242f1bf4c342d6e129e1029cc70aefa04115
  Stored in directory: /home/omero/.cache/pip/wheels/e3/db/94/c7ed73401c8459f3935212f514ee953d11b520ca8c20333850
Successfully built omero-scripts
Installing collected packages: omero-scripts
Successfully installed omero-scripts-5.9.2.dev0
+ for x in *.tar.gz
+ pip install -U omero_web-5.30.1.dev0.tar.gz
Processing ./omero_web-5.30.1.dev0.tar.gz
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.1.dev0) (5.22.0.dev0)
Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.30.1.dev0)
  Downloading concurrent_log_handler-0.9.28-py3-none-any.whl.metadata (23 kB)
Collecting Django<5.3,>=5.2.9 (from omero-web==5.30.1.dev0)
  Downloading django-5.2.9-py3-none-any.whl.metadata (4.1 kB)
Collecting django-pipeline (from omero-web==5.30.1.dev0)
  Downloading django_pipeline-4.1.0-py3-none-any.whl.metadata (5.9 kB)
Collecting django-cors-headers==3.7.0 (from omero-web==5.30.1.dev0)
  Downloading django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
Collecting whitenoise>=5.3.0 (from omero-web==5.30.1.dev0)
  Downloading whitenoise-6.11.0-py3-none-any.whl.metadata (3.7 kB)
Collecting gunicorn>=19.3 (from omero-web==5.30.1.dev0)
  Downloading gunicorn-23.0.0-py3-none-any.whl.metadata (4.4 kB)
Requirement already satisfied: omero-marshal>=0.9.1 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.1.dev0) (0.9.2.dev0)
Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.1.dev0) (12.0.0)
Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.1.dev0) (2025.2)
Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.1.dev0) (3.2.0)
Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.1.dev0) (25.0)
Collecting importlib-resources (from omero-web==5.30.1.dev0)
  Downloading importlib_resources-6.5.2-py3-none-any.whl.metadata (3.9 kB)
Collecting asgiref>=3.8.1 (from Django<5.3,>=5.2.9->omero-web==5.30.1.dev0)
  Downloading asgiref-3.11.0-py3-none-any.whl.metadata (9.3 kB)
Collecting sqlparse>=0.3.1 (from Django<5.3,>=5.2.9->omero-web==5.30.1.dev0)
  Downloading sqlparse-0.5.4-py3-none-any.whl.metadata (4.7 kB)
Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.1.dev0) (1.4.4)
Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.1.dev0) (1.0.0)
Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.1.dev0) (2.3.5)
Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.1.dev0) (6.0.3)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.1.dev0) (3.6.5)
Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.1.dev0) (2.32.5)
Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web==5.30.1.dev0) (65.5.1)
Collecting wheel (from django-pipeline->omero-web==5.30.1.dev0)
  Downloading wheel-0.45.1-py3-none-any.whl.metadata (2.3 kB)
Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.1.dev0) (3.4.4)
Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.1.dev0) (3.11)
Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.1.dev0) (2.6.2)
Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.1.dev0) (2025.11.12)
Downloading django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
Downloading django-5.2.9-py3-none-any.whl (8.3 MB)
   ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 8.3/8.3 MB 19.8 MB/s  0:00:00
Downloading asgiref-3.11.0-py3-none-any.whl (24 kB)
Downloading concurrent_log_handler-0.9.28-py3-none-any.whl (28 kB)
Downloading gunicorn-23.0.0-py3-none-any.whl (85 kB)
Downloading sqlparse-0.5.4-py3-none-any.whl (45 kB)
Downloading whitenoise-6.11.0-py3-none-any.whl (20 kB)
Downloading django_pipeline-4.1.0-py3-none-any.whl (75 kB)
Downloading importlib_resources-6.5.2-py3-none-any.whl (37 kB)
Downloading wheel-0.45.1-py3-none-any.whl (72 kB)
Building wheels for collected packages: omero-web
  Building wheel for omero-web (pyproject.toml): started
  Building wheel for omero-web (pyproject.toml): finished with status 'done'
  Created wheel for omero-web: filename=omero_web-5.30.1.dev0-py3-none-any.whl size=2819190 sha256=87e30ddfc0284a9f1c7a13c386698d36eb073465b43fdbda946b5d12b14b1596
  Stored in directory: /home/omero/.cache/pip/wheels/55/56/8c/76994afd7450bff12c009b26528517ee8944f8f2e1a40edc6c
Successfully built omero-web
Installing collected packages: whitenoise, wheel, sqlparse, importlib-resources, gunicorn, concurrent-log-handler, asgiref, django-pipeline, Django, django-cors-headers, omero-web

Successfully installed Django-5.2.9 asgiref-3.11.0 concurrent-log-handler-0.9.28 django-cors-headers-3.7.0 django-pipeline-4.1.0 gunicorn-23.0.0 importlib-resources-6.5.2 omero-web-5.30.1.dev0 sqlparse-0.5.4 wheel-0.45.1 whitenoise-6.11.0
+ wget https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
--2025-12-17 21:12:47--  https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.110.133, 185.199.111.133, 185.199.108.133, ...
Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.110.133|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 126482 (124K) [text/plain]
Saving to: ‘Figure_To_Pdf.py’

     0K .......... .......... .......... .......... .......... 40% 3.94M 0s
    50K .......... .......... .......... .......... .......... 80% 5.85M 0s
   100K .......... .......... ...                             100% 62.2M=0.02s

2025-12-17 21:12:47 (5.72 MB/s) - ‘Figure_To_Pdf.py’ saved [126482/126482]

+ chmod 755 Figure_To_Pdf.py
+ mv Figure_To_Pdf.py /home/omero/workspace/OMERO-server/OMERO.server/lib/scripts/omero/figure_scripts
+ omero config set omero.db.name OMERO-server
+ omero config set omero.db.host pg
+ omero config set omero.db.user postgres
+ omero config set omero.data.dir /home/omero/omero-server-data
+ omero config set omero.fs.repo.path %user%_%userId%/%thread%//%year%-%month%/%day%/%time%
+ omero config set omero.db.poolsize 25
+ omero config set omero.security.trustStore /etc/pki/ca-trust/extracted/java/cacerts
+ omero config set omero.security.trustStorePassword changeit
+ omero config set omero.mail.config true
+ omero config set omero.server.nodedescriptors master:Blitz-0,Indexer-0,Processor-0,Storm,Tables-0
+ omero config set omero.jvmcfg.append '--add-opens java.base/java.lang=ALL-UNNAMED --add-exports java.naming/com.sun.jndi.ldap=ALL-UNNAMED'
+ omero certificates
OpenSSL 3.5.1 1 Jul 2025 (Library: OpenSSL 3.5.1 1 Jul 2025)
certificates created: /home/omero/omero-server-data/certs/server.key /home/omero/omero-server-data/certs/server.pem /home/omero/omero-server-data/certs/server.p12
+ '[' false = true ']'
+ echo 'Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade'
Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade
+ omego db -vvv upgrade --serverdir /home/omero/workspace/OMERO-server/OMERO.server --dbname OMERO-server
2025-12-17 21:13:01,476 [    omego.db] DEBUG            dbcommand => upgrade
2025-12-17 21:13:01,476 [    omego.db] DEBUG               dbhost => localhost
2025-12-17 21:13:01,476 [    omego.db] DEBUG               dbname => OMERO-server
2025-12-17 21:13:01,476 [    omego.db] DEBUG               dbpass => omero
2025-12-17 21:13:01,476 [    omego.db] DEBUG               dbuser => omero
2025-12-17 21:13:01,476 [    omego.db] DEBUG             rootpass => omero
2025-12-17 21:13:01,476 [    omego.db] DEBUG            serverdir => /home/omero/workspace/OMERO-server/OMERO.server
2025-12-17 21:13:01,476 [omego.extern] INFO  Executing : omero version
OMERO.py version:
OMERO.server version:
5.6.3-576-82ef22269e-ice36-b1
5.22.0.dev0
2025-12-17 21:13:02,649 [omego.extern] INFO  Completed [1.173 s]
2025-12-17 21:13:02,650 [omego.extern] DEBUG Using omero CLI from omero
2025-12-17 21:13:02,650 [    omego.db] INFO  DbAdmin: DbAdmin /home/omero/workspace/OMERO-server/OMERO.server ...
2025-12-17 21:13:02,650 [omego.extern] INFO  Running [current environment]: omero config get --show-password
2025-12-17 21:13:02,650 [omego.extern] INFO  Executing : omero config get --show-password
2025-12-17 21:13:03,768 [omego.extern] INFO  Completed [1.118 s]
2025-12-17 21:13:03,768 [    omego.db] INFO  Failed to lookup parameter omero.db.pass, using omero
2025-12-17 21:13:03,768 [omego.extern] INFO  Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t --version
2025-12-17 21:13:03,773 [omego.extern] INFO  Completed [0.006 s]
2025-12-17 21:13:03,774 [    omego.db] DEBUG stdout: b'psql (PostgreSQL) 16.11\n'
2025-12-17 21:13:03,774 [    omego.db] INFO  psql version: psql (PostgreSQL) 16.11

2025-12-17 21:13:03,774 [omego.extern] INFO  Running [current environment]: omero config get --show-password
2025-12-17 21:13:03,774 [omego.extern] INFO  Executing : omero config get --show-password
2025-12-17 21:13:04,931 [omego.extern] INFO  Completed [1.157 s]
2025-12-17 21:13:04,931 [    omego.db] INFO  Failed to lookup parameter omero.db.pass, using omero
2025-12-17 21:13:04,931 [omego.extern] INFO  Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c \conninfo
2025-12-17 21:13:04,939 [omego.extern] ERROR Failed [0.008 s]
2025-12-17 21:13:04,939 [    omego.db] ERROR Non-zero return code
command: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c \conninfo
return code: 2
stdout: b''
stderr: b'psql: error: connection to server at "pg" (172.18.0.12), port 5432 failed: FATAL:  database "OMERO-server" does not exist\n'
ERROR: Database connection check failed
Build step 'Execute shell' marked build as failure
Finished: FAILURE