22:02:19 Started by user devspace 22:02:19 Running as SYSTEM 22:02:19 Building remotely on omero (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-server 22:02:19 [OMERO-server] $ /bin/bash -xe /tmp/jenkins10322431005349170463.sh 22:02:19 + source /home/settings.env 22:02:19 ++ OMERO_DB_HOST=pg 22:02:19 ++ OMERO_DB_USER=postgres 22:02:19 ++ OMERO_DB_PASS= 22:02:19 ++ OMERO_ROOT_PASS=omero 22:02:19 ++ OMERO_DATA_DIR=/OMERO 22:02:19 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR 22:02:19 + OMERO_DB_NAME=OMERO-server 22:02:19 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server 22:02:19 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server 22:02:19 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server 22:02:19 + OMERO_DATA_DIR=/home/omero/omero-server-data 22:02:19 + '[' -e /home/omero/workspace/OMERO-server/OMERO.server ']' 22:02:19 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate 22:02:19 ++ deactivate nondestructive 22:02:19 ++ '[' -n '' ']' 22:02:19 ++ '[' -n '' ']' 22:02:19 ++ '[' -n /bin/bash -o -n '' ']' 22:02:19 ++ hash -r 22:02:19 ++ '[' -n '' ']' 22:02:19 ++ unset VIRTUAL_ENV 22:02:19 ++ '[' '!' nondestructive = nondestructive ']' 22:02:19 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3 22:02:19 ++ export VIRTUAL_ENV 22:02:19 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 22:02:19 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 22:02:19 ++ export PATH 22:02:19 ++ '[' -n '' ']' 22:02:19 ++ '[' -z '' ']' 22:02:19 ++ _OLD_VIRTUAL_PS1= 22:02:19 ++ PS1='(.venv3) ' 22:02:19 ++ export PS1 22:02:19 ++ '[' -n /bin/bash -o -n '' ']' 22:02:19 ++ hash -r 22:02:19 + omero admin stop 22:02:22 Waiting on shutdown. Use CTRL-C to exit 22:02:22 .+ sleep 5 22:02:38 + deactivate 22:02:38 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']' 22:02:38 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 22:02:38 + export PATH 22:02:38 + unset _OLD_VIRTUAL_PATH 22:02:38 + '[' -n '' ']' 22:02:38 + '[' -n /bin/bash -o -n '' ']' 22:02:38 + hash -r 22:02:38 + '[' -n '' ']' 22:02:38 + unset VIRTUAL_ENV 22:02:38 + '[' '!' '' = nondestructive ']' 22:02:38 + unset -f deactivate 22:02:38 + rm -rf /home/omero/workspace/OMERO-server/.venv3 22:02:38 + python3 -m venv /home/omero/workspace/OMERO-server/.venv3 22:02:41 + '[' false = true ']' 22:02:41 + echo 'Skipping PURGE_DATA:CleanDbAndRepo' 22:02:41 Skipping PURGE_DATA:CleanDbAndRepo 22:02:41 + rm -rf /home/omero/workspace/OMERO-server/Figure_To_Pdf.py /home/omero/workspace/OMERO-server/idr0021-experimentA-bulk.yml /home/omero/workspace/OMERO-server/idr0021-experimentA-filePaths.tsv /home/omero/workspace/OMERO-server/idr0079-experimentA-bulk.yml /home/omero/workspace/OMERO-server/idr0079-experimentA-filePaths.tsv /home/omero/workspace/OMERO-server/omero-blitz-5.7.3-SNAPSHOT-python.zip /home/omero/workspace/OMERO-server/omero-dropbox-5.6.3.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_marshal-0.9.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero-py-5.19.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero-scripts-5.8.1.dev0.tar.gz /home/omero/workspace/OMERO-server/OMERO.server /home/omero/workspace/OMERO-server/omero-web-5.25.1.dev0.tar.gz /home/omero/workspace/OMERO-server/version.properties 22:02:44 Copied 1 artifact from "OMERO-build" build number 7 22:02:45 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 7 22:02:45 Copied 2 artifacts from "OMERO-build-build" build number 7 22:02:45 [OMERO-server] $ /bin/bash -xe /tmp/jenkins3224940208636677255.sh 22:02:45 + source /home/settings.env 22:02:45 ++ OMERO_DB_HOST=pg 22:02:45 ++ OMERO_DB_USER=postgres 22:02:45 ++ OMERO_DB_PASS= 22:02:45 ++ OMERO_ROOT_PASS=omero 22:02:45 ++ OMERO_DATA_DIR=/OMERO 22:02:45 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR 22:02:45 + OMERO_DB_NAME=OMERO-server 22:02:45 + OMERO_DATA_DIR=/home/omero/omero-server-data 22:02:45 + mkdir -p /home/omero/omero-server-data 22:02:45 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server 22:02:45 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server 22:02:45 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server 22:02:45 + export ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip 22:02:45 + ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip 22:02:45 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties 22:02:45 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties 22:02:45 ++ ls OMERO.server-5.6.3-437-854b934e23-ice36.zip 22:02:45 + ZIP=OMERO.server-5.6.3-437-854b934e23-ice36.zip 22:02:45 + '[' '!' -z '' ']' 22:02:45 + DIST=OMERO.server-5.6.3-437-854b934e23-ice36 22:02:45 + unzip OMERO.server-5.6.3-437-854b934e23-ice36.zip 22:02:45 Archive: OMERO.server-5.6.3-437-854b934e23-ice36.zip 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/blitz/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/grid/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/profiles/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/templates/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/templates/error/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/templates/grid/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/scripts/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/scripts/luts/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/scripts/luts/janelia/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/scripts/luts/ncsa_paledit/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/scripts/luts/wcif/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/scripts/omero/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/scripts/omero/analysis_scripts/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/scripts/omero/annotation_scripts/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/scripts/omero/export_scripts/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/scripts/omero/figure_scripts/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/scripts/omero/import_scripts/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/scripts/omero/util_scripts/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/server/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/share/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/share/licenses/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/misc/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__1/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__10/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__11/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__2/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__3/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__4/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__5/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__6/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__7/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__8/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__9/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3__4/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3__5/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3__6/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3__7/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO4.1__0/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO4.2__0/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO4.2__0/t/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO4.3__0/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO4.4__0/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO4__0/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.0__0/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.1__1/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.2__0/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.3__0/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4DEV__1/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4DEV__2/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4DEV__3/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4__0/ 22:02:45 creating: OMERO.server-5.6.3-437-854b934e23-ice36/var/ 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/LICENSE.txt 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/backup.cfg 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/blitz/mail-senders.example 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/blitz/mail-server.example 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/build.properties 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/env.bat 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/env.sh 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/hibernate.properties 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/ice.config 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/logback-cli.xml 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/logback-indexing-cli.xml 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/logback-indexing.xml 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/logback.xml 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/mime.types 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/node1.cfg 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/node2.cfg 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/omero.properties 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/profiles/psql 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/rollover.cfg 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/templates/Windows.cfg 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/templates/error/maintainance.html 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/templates/grid/README 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/templates/grid/default.xml 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/templates/grid/templates.xml 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/templates/grid/windefault.xml 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/templates/ice.config 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/templates/internal.cfg 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/templates/master.cfg 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/templates/robot.template 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/etc/testdropbox.config 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/history.rst 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/OMEZarrReader.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/activation.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/aggdesigner-algorithm.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/aircompressor.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/annotations.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/antlr.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/aopalliance.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/apache-client.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/arns.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/auth.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/avatica-core.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/avatica-metrics.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/aws-core.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/aws-query-protocol.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/aws-xml-protocol.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/base.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/batik-all.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/batik-anim.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/batik-awt-util.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/batik-bridge.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/batik-codec.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/batik-constants.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/batik-css.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/batik-dom.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/batik-ext.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/batik-extension.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/batik-gui-util.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/batik-gvt.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/batik-i18n.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/batik-parser.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/batik-rasterizer-ext.jar 22:02:45 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/lib/client/batik-rasterizer.jar 22:02:45 inflating: 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OMERO.server-5.6.3-437-854b934e23-ice36/share/licenses/mit.txt 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/share/licenses/mpl-v1_0.htm 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/share/licenses/npl-1_1.txt 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/share/licenses/path.txt 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/share/licenses/pil.txt 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/share/licenses/postgresql.txt 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/share/licenses/psf-v2.0.txt 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/share/licenses/psf-v2.5.txt 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/share/licenses/scons.txt 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/share/licenses/slf4j.txt 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/share/licenses/tablelayout.txt 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/share/licenses/which.txt 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/share/licenses/zlib-libpng.txt 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/share/licenses/zpl-v2.1.txt 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/README.txt 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/misc/Makefile 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/misc/current.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/misc/enums.py 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__1/OMERO3__7.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__10/OMERO3A__9.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__11/OMERO3A__10.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__11/OMERO3A__5.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__2/OMERO3A__1.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__3/OMERO3A__2.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__3/OMERO3__5.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__4/OMERO3A__3.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__4/OMERO3__5.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__5/OMERO3A__4.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__6/OMERO3A__5.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__7/OMERO3A__6.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__8/OMERO3A__6.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3A__9/OMERO3A__8.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3__4/OMERO3__1.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3__5/OMERO3__4.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3__6/OMERO3__5.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO3__7/OMERO3__6.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO4.1__0/OMERO4__0.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO4.2__0/OMERO4.1__0.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO4.3__0/OMERO4.2__0.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO4.4__0/OMERO4.1__0.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO4.4__0/OMERO4.3__0.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO4__0/OMERO3A__11.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.0__0/OMERO4.4__0.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.1__1/OMERO5.0__0.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.1__1/OMERO5.1__0.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.2__0/OMERO5.1__1.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.3__0/OMERO5.2__0.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.3__0/delete-ns-orphans.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4__0/OMERO5.3__0.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4__0/OMERO5.3__1.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4__0/psql-footer.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4__0/psql-header.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4__0/schema.sql 22:02:47 inflating: OMERO.server-5.6.3-437-854b934e23-ice36/sql/psql/OMERO5.4__0/views.sql 22:02:47 + rm -f OMERO.server-5.6.3-437-854b934e23-ice36.zip 22:02:47 + mv /home/omero/workspace/OMERO-server/OMERO.server-5.6.3-437-854b934e23-ice36 /home/omero/workspace/OMERO-server/OMERO.server 22:02:47 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate 22:02:47 ++ deactivate nondestructive 22:02:47 ++ '[' -n '' ']' 22:02:47 ++ '[' -n '' ']' 22:02:47 ++ '[' -n /bin/bash -o -n '' ']' 22:02:47 ++ hash -r 22:02:47 ++ '[' -n '' ']' 22:02:47 ++ unset VIRTUAL_ENV 22:02:47 ++ '[' '!' nondestructive = nondestructive ']' 22:02:47 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3 22:02:47 ++ export VIRTUAL_ENV 22:02:47 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 22:02:47 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 22:02:47 ++ export PATH 22:02:47 ++ '[' -n '' ']' 22:02:47 ++ '[' -z '' ']' 22:02:47 ++ _OLD_VIRTUAL_PS1= 22:02:47 ++ PS1='(.venv3) ' 22:02:47 ++ export PS1 22:02:47 ++ '[' -n /bin/bash -o -n '' ']' 22:02:47 ++ hash -r 22:02:47 + pip install https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl 22:02:48 Collecting zeroc-ice==3.6.5 22:02:49 Downloading https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl (31.3 MB) 22:02:51 Installing collected packages: zeroc-ice 22:02:52 Successfully installed zeroc-ice-3.6.5 22:02:52 WARNING: You are using pip version 21.2.3; however, version 24.0 is available. 22:02:52 You should consider upgrading via the '/home/omero/workspace/OMERO-server/.venv3/bin/python3 -m pip install --upgrade pip' command. 22:02:52 + pip install -U pip future 22:02:52 Requirement already satisfied: pip in ./.venv3/lib/python3.9/site-packages (21.2.3) 22:02:52 Collecting pip 22:02:52 Using cached pip-24.0-py3-none-any.whl (2.1 MB) 22:02:52 Collecting future 22:02:53 Using cached future-1.0.0-py3-none-any.whl (491 kB) 22:02:53 Installing collected packages: pip, future 22:02:53 Attempting uninstall: pip 22:02:53 Found existing installation: pip 21.2.3 22:02:53 Uninstalling pip-21.2.3: 22:02:53 Successfully uninstalled pip-21.2.3 22:02:54 Successfully installed future-1.0.0 pip-24.0 22:02:54 + pip install markdown 22:02:55 Collecting markdown 22:02:55 Using cached Markdown-3.6-py3-none-any.whl.metadata (7.0 kB) 22:02:55 Collecting importlib-metadata>=4.4 (from markdown) 22:02:55 Using cached importlib_metadata-7.1.0-py3-none-any.whl.metadata (4.7 kB) 22:02:55 Collecting zipp>=0.5 (from importlib-metadata>=4.4->markdown) 22:02:55 Using cached zipp-3.18.1-py3-none-any.whl.metadata (3.5 kB) 22:02:55 Using cached Markdown-3.6-py3-none-any.whl (105 kB) 22:02:55 Using cached importlib_metadata-7.1.0-py3-none-any.whl (24 kB) 22:02:55 Using cached zipp-3.18.1-py3-none-any.whl (8.2 kB) 22:02:56 Installing collected packages: zipp, importlib-metadata, markdown 22:02:56 Successfully installed importlib-metadata-7.1.0 markdown-3.6 zipp-3.18.1 22:02:56 + pip install reportlab 22:02:57 Collecting reportlab 22:02:57 Using cached reportlab-4.1.0-py3-none-any.whl.metadata (1.4 kB) 22:02:57 Collecting pillow>=9.0.0 (from reportlab) 22:02:57 Using cached pillow-10.2.0-cp39-cp39-manylinux_2_28_x86_64.whl.metadata (9.7 kB) 22:02:57 Collecting chardet (from reportlab) 22:02:57 Using cached chardet-5.2.0-py3-none-any.whl.metadata (3.4 kB) 22:02:57 Using cached reportlab-4.1.0-py3-none-any.whl (1.9 MB) 22:02:57 Using cached pillow-10.2.0-cp39-cp39-manylinux_2_28_x86_64.whl (4.5 MB) 22:02:57 Using cached chardet-5.2.0-py3-none-any.whl (199 kB) 22:02:57 Installing collected packages: pillow, chardet, reportlab 22:02:59 Successfully installed chardet-5.2.0 pillow-10.2.0 reportlab-4.1.0 22:02:59 + pip install omego 22:02:59 Collecting omego 22:02:59 Using cached omego-0.7.0-py3-none-any.whl 22:02:59 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omego) (1.0.0) 22:02:59 Collecting yaclifw>=0.1.1 (from omego) 22:02:59 Using cached yaclifw-0.2.0-py3-none-any.whl 22:02:59 Collecting six (from yaclifw>=0.1.1->omego) 22:02:59 Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) 22:02:59 Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) 22:02:59 Installing collected packages: six, yaclifw, omego 22:03:00 Successfully installed omego-0.7.0 six-1.16.0 yaclifw-0.2.0 22:03:00 + pip install tables 22:03:00 Collecting tables 22:03:00 Using cached tables-3.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.3 kB) 22:03:01 Collecting numpy>=1.19.0 (from tables) 22:03:01 Using cached numpy-1.26.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (61 kB) 22:03:01 Collecting numexpr>=2.6.2 (from tables) 22:03:01 Using cached numexpr-2.9.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (7.9 kB) 22:03:01 Collecting packaging (from tables) 22:03:01 Using cached packaging-24.0-py3-none-any.whl.metadata (3.2 kB) 22:03:01 Collecting py-cpuinfo (from tables) 22:03:01 Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes) 22:03:01 Collecting blosc2>=2.3.0 (from tables) 22:03:01 Using cached blosc2-2.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (9.2 kB) 22:03:01 Collecting ndindex>=1.4 (from blosc2>=2.3.0->tables) 22:03:01 Using cached ndindex-1.8-py3-none-any.whl.metadata (3.4 kB) 22:03:01 Collecting msgpack (from blosc2>=2.3.0->tables) 22:03:01 Using cached msgpack-1.0.8-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (9.1 kB) 22:03:01 Using cached tables-3.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (7.5 MB) 22:03:01 Using cached blosc2-2.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (4.4 MB) 22:03:01 Using cached numexpr-2.9.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (374 kB) 22:03:01 Using cached numpy-1.26.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (18.2 MB) 22:03:01 Using cached packaging-24.0-py3-none-any.whl (53 kB) 22:03:01 Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB) 22:03:01 Using cached ndindex-1.8-py3-none-any.whl (91 kB) 22:03:01 Using cached msgpack-1.0.8-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (385 kB) 22:03:02 Installing collected packages: py-cpuinfo, packaging, numpy, ndindex, msgpack, numexpr, blosc2, tables 22:03:05 Successfully installed blosc2-2.5.1 msgpack-1.0.8 ndindex-1.8 numexpr-2.9.0 numpy-1.26.4 packaging-24.0 py-cpuinfo-9.0.0 tables-3.9.2 22:03:05 + pip install jinja2 22:03:05 Collecting jinja2 22:03:05 Using cached Jinja2-3.1.3-py3-none-any.whl.metadata (3.3 kB) 22:03:05 Collecting MarkupSafe>=2.0 (from jinja2) 22:03:05 Using cached MarkupSafe-2.1.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.0 kB) 22:03:05 Using cached Jinja2-3.1.3-py3-none-any.whl (133 kB) 22:03:05 Using cached MarkupSafe-2.1.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (25 kB) 22:03:05 Installing collected packages: MarkupSafe, jinja2 22:03:06 Successfully installed MarkupSafe-2.1.5 jinja2-3.1.3 22:03:06 + pip install omero-py 22:03:06 Collecting omero-py 22:03:06 Using cached omero_py-5.19.0-py3-none-any.whl.metadata (6.6 kB) 22:03:06 Collecting urllib3<2 (from omero-py) 22:03:06 Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) 22:03:06 Collecting appdirs (from omero-py) 22:03:06 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB) 22:03:06 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py) (1.0.0) 22:03:06 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py) (1.26.4) 22:03:06 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py) (10.2.0) 22:03:06 Collecting PyYAML (from omero-py) 22:03:06 Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) 22:03:06 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py) (3.6.5) 22:03:06 Collecting requests (from omero-py) 22:03:06 Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) 22:03:06 Collecting portalocker (from omero-py) 22:03:06 Using cached portalocker-2.8.2-py3-none-any.whl.metadata (8.5 kB) 22:03:07 Collecting charset-normalizer<4,>=2 (from requests->omero-py) 22:03:07 Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) 22:03:07 Collecting idna<4,>=2.5 (from requests->omero-py) 22:03:07 Using cached idna-3.6-py3-none-any.whl.metadata (9.9 kB) 22:03:07 Collecting certifi>=2017.4.17 (from requests->omero-py) 22:03:07 Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) 22:03:07 Using cached omero_py-5.19.0-py3-none-any.whl (2.8 MB) 22:03:07 Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) 22:03:07 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB) 22:03:07 Using cached portalocker-2.8.2-py3-none-any.whl (17 kB) 22:03:07 Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) 22:03:07 Using cached requests-2.31.0-py3-none-any.whl (62 kB) 22:03:07 Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) 22:03:07 Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) 22:03:07 Using cached idna-3.6-py3-none-any.whl (61 kB) 22:03:08 Installing collected packages: appdirs, urllib3, PyYAML, portalocker, idna, charset-normalizer, certifi, requests, omero-py 22:03:10 Successfully installed PyYAML-6.0.1 appdirs-1.4.4 certifi-2024.2.2 charset-normalizer-3.3.2 idna-3.6 omero-py-5.19.0 portalocker-2.8.2 requests-2.31.0 urllib3-1.26.18 22:03:10 + pip install git+https://github.com/snoopycrimecop/omero-metadata.git@merge_ci#egg=omero-metadata 22:03:10 Collecting omero-metadata 22:03:10 Cloning https://github.com/snoopycrimecop/omero-metadata.git (to revision merge_ci) to /tmp/pip-install-dgqsw9xw/omero-metadata_811fd80c1f5e42539bb4603c849f5034 22:03:10 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-metadata.git /tmp/pip-install-dgqsw9xw/omero-metadata_811fd80c1f5e42539bb4603c849f5034 22:03:11 Resolved https://github.com/snoopycrimecop/omero-metadata.git to commit 1d3d76cb73401efbb04e5efafc7c7e04aa91a5bc 22:03:11 Installing build dependencies: started 22:03:13 Installing build dependencies: finished with status 'done' 22:03:13 Getting requirements to build wheel: started 22:03:13 Getting requirements to build wheel: finished with status 'done' 22:03:13 Installing backend dependencies: started 22:03:14 Installing backend dependencies: finished with status 'done' 22:03:14 Preparing metadata (pyproject.toml): started 22:03:14 Preparing metadata (pyproject.toml): finished with status 'done' 22:03:14 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-metadata) (5.19.0) 22:03:14 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-metadata) (6.0.1) 22:03:14 Requirement already satisfied: jinja2 in ./.venv3/lib/python3.9/site-packages (from omero-metadata) (3.1.3) 22:03:14 Collecting pandas (from omero-metadata) 22:03:15 Using cached pandas-2.2.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (19 kB) 22:03:15 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.26.18) 22:03:15 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.4.4) 22:03:15 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.0.0) 22:03:15 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.26.4) 22:03:15 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (10.2.0) 22:03:15 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (3.6.5) 22:03:15 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (2.31.0) 22:03:15 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (2.8.2) 22:03:15 Requirement already satisfied: MarkupSafe>=2.0 in ./.venv3/lib/python3.9/site-packages (from jinja2->omero-metadata) (2.1.5) 22:03:15 Collecting python-dateutil>=2.8.2 (from pandas->omero-metadata) 22:03:15 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB) 22:03:15 Collecting pytz>=2020.1 (from pandas->omero-metadata) 22:03:15 Using cached pytz-2024.1-py2.py3-none-any.whl.metadata (22 kB) 22:03:15 Collecting tzdata>=2022.7 (from pandas->omero-metadata) 22:03:15 Using cached tzdata-2024.1-py2.py3-none-any.whl.metadata (1.4 kB) 22:03:15 Requirement already satisfied: six>=1.5 in ./.venv3/lib/python3.9/site-packages (from python-dateutil>=2.8.2->pandas->omero-metadata) (1.16.0) 22:03:15 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.3.2) 22:03:15 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.6) 22:03:15 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2024.2.2) 22:03:15 Using cached pandas-2.2.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (13.0 MB) 22:03:15 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB) 22:03:15 Using cached pytz-2024.1-py2.py3-none-any.whl (505 kB) 22:03:16 Using cached tzdata-2024.1-py2.py3-none-any.whl (345 kB) 22:03:16 Building wheels for collected packages: omero-metadata 22:03:16 Building wheel for omero-metadata (pyproject.toml): started 22:03:16 Building wheel for omero-metadata (pyproject.toml): finished with status 'done' 22:03:16 Created wheel for omero-metadata: filename=omero_metadata-0.12.1.dev0-py3-none-any.whl size=39111 sha256=b547410a923bf5747e44602fb294a1c7a08fcaabf46b45970b02de1a485cce1b 22:03:16 Stored in directory: /tmp/pip-ephem-wheel-cache-081uixr8/wheels/64/09/47/3b86b706f8f6f4bec1b7fd6641d2e4a09814e754fa4c85c82d 22:03:16 Successfully built omero-metadata 22:03:16 Installing collected packages: pytz, tzdata, python-dateutil, pandas, omero-metadata 22:03:22 Successfully installed omero-metadata-0.12.1.dev0 pandas-2.2.1 python-dateutil-2.9.0.post0 pytz-2024.1 tzdata-2024.1 22:03:22 + pip install git+https://github.com/snoopycrimecop/omero-cli-render.git@merge_ci#egg=omero-cli-render 22:03:22 Collecting omero-cli-render 22:03:22 Cloning https://github.com/snoopycrimecop/omero-cli-render.git (to revision merge_ci) to /tmp/pip-install-_33hx88_/omero-cli-render_90660d53b4a8473998913be771c73ebb 22:03:22 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-render.git /tmp/pip-install-_33hx88_/omero-cli-render_90660d53b4a8473998913be771c73ebb 22:03:23 Running command git checkout -b merge_ci --track origin/merge_ci 22:03:24 Switched to a new branch 'merge_ci' 22:03:24 branch 'merge_ci' set up to track 'origin/merge_ci'. 22:03:24 Resolved https://github.com/snoopycrimecop/omero-cli-render.git to commit c9d362b6f278aecfcdf112f038624c6b0dae202d 22:03:24 Installing build dependencies: started 22:03:25 Installing build dependencies: finished with status 'done' 22:03:25 Getting requirements to build wheel: started 22:03:26 Getting requirements to build wheel: finished with status 'done' 22:03:26 Installing backend dependencies: started 22:03:26 Installing backend dependencies: finished with status 'done' 22:03:26 Preparing metadata (pyproject.toml): started 22:03:27 Preparing metadata (pyproject.toml): finished with status 'done' 22:03:27 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-cli-render) (6.0.1) 22:03:27 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-cli-render) (5.19.0) 22:03:27 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-cli-render) (1.0.0) 22:03:27 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.26.18) 22:03:27 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.4.4) 22:03:27 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.26.4) 22:03:27 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (10.2.0) 22:03:27 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.6.5) 22:03:27 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.31.0) 22:03:27 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.8.2) 22:03:27 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.3.2) 22:03:27 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.6) 22:03:27 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2024.2.2) 22:03:27 Building wheels for collected packages: omero-cli-render 22:03:27 Building wheel for omero-cli-render (pyproject.toml): started 22:03:27 Building wheel for omero-cli-render (pyproject.toml): finished with status 'done' 22:03:27 Created wheel for omero-cli-render: filename=omero_cli_render-0.8.1.dev0-py3-none-any.whl size=18018 sha256=d2b706f05cecadaf6605ed9975c72d1a34766e2fa81eb4b38966a2590e6aa1e7 22:03:27 Stored in directory: /tmp/pip-ephem-wheel-cache-ut0_th0g/wheels/58/32/1b/746489b3c7c17a98c6cd7195bdd3b426dd4137caeb1045a994 22:03:27 Successfully built omero-cli-render 22:03:27 Installing collected packages: omero-cli-render 22:03:27 Successfully installed omero-cli-render-0.8.1.dev0 22:03:27 + pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate 22:03:28 Collecting omero-cli-duplicate 22:03:28 Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-v919kjo8/omero-cli-duplicate_f891349da4eb477aa80dc639a975dc9f 22:03:28 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-v919kjo8/omero-cli-duplicate_f891349da4eb477aa80dc639a975dc9f 22:03:29 Running command git checkout -b merge_ci --track origin/merge_ci 22:03:29 Switched to a new branch 'merge_ci' 22:03:29 branch 'merge_ci' set up to track 'origin/merge_ci'. 22:03:29 Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit 6a0c1d0cb6c23071709dfe245393cb37747601b9 22:03:29 Installing build dependencies: started 22:03:31 Installing build dependencies: finished with status 'done' 22:03:31 Getting requirements to build wheel: started 22:03:31 Getting requirements to build wheel: finished with status 'done' 22:03:31 Installing backend dependencies: started 22:03:32 Installing backend dependencies: finished with status 'done' 22:03:32 Preparing metadata (pyproject.toml): started 22:03:32 Preparing metadata (pyproject.toml): finished with status 'done' 22:03:32 Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib/python3.9/site-packages (from omero-cli-duplicate) (5.19.0) 22:03:32 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.26.18) 22:03:32 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4) 22:03:32 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0) 22:03:32 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.26.4) 22:03:32 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (10.2.0) 22:03:32 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.1) 22:03:32 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5) 22:03:32 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.31.0) 22:03:32 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.8.2) 22:03:32 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.3.2) 22:03:32 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.6) 22:03:32 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2024.2.2) 22:03:32 Building wheels for collected packages: omero-cli-duplicate 22:03:32 Building wheel for omero-cli-duplicate (pyproject.toml): started 22:03:32 Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done' 22:03:32 Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11443 sha256=fe2ab8ef8494578aefd84debe380ac21bf3321990c3d0e77a15a905c801571a5 22:03:32 Stored in directory: /tmp/pip-ephem-wheel-cache-5u0i7eco/wheels/f1/55/ac/0cb8b093a4c417e5157143839711e7613efa64eaa21c29ef84 22:03:32 Successfully built omero-cli-duplicate 22:03:32 Installing collected packages: omero-cli-duplicate 22:03:32 Successfully installed omero-cli-duplicate-0.4.1.dev0 22:03:33 + pip install omero-certificates 22:03:33 Collecting omero-certificates 22:03:33 Using cached omero_certificates-0.3.2-py3-none-any.whl.metadata (3.7 kB) 22:03:33 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-certificates) (5.19.0) 22:03:33 Collecting distro==1.8.0 (from omero-certificates) 22:03:33 Using cached distro-1.8.0-py3-none-any.whl.metadata (6.9 kB) 22:03:33 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.26.18) 22:03:33 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4) 22:03:33 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0) 22:03:33 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.26.4) 22:03:33 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (10.2.0) 22:03:33 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.1) 22:03:33 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5) 22:03:33 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (2.31.0) 22:03:33 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (2.8.2) 22:03:33 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.3.2) 22:03:33 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.6) 22:03:33 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2024.2.2) 22:03:33 Using cached omero_certificates-0.3.2-py3-none-any.whl (13 kB) 22:03:33 Using cached distro-1.8.0-py3-none-any.whl (20 kB) 22:03:34 Installing collected packages: distro, omero-certificates 22:03:34 Successfully installed distro-1.8.0 omero-certificates-0.3.2 22:03:34 + for x in *.tar.gz 22:03:34 + pip install -U omero-dropbox-5.6.3.dev0.tar.gz 22:03:34 Processing ./omero-dropbox-5.6.3.dev0.tar.gz 22:03:34 Installing build dependencies: started 22:03:36 Installing build dependencies: finished with status 'done' 22:03:36 Getting requirements to build wheel: started 22:03:36 Getting requirements to build wheel: finished with status 'done' 22:03:36 Installing backend dependencies: started 22:03:37 Installing backend dependencies: finished with status 'done' 22:03:37 Preparing metadata (pyproject.toml): started 22:03:37 Preparing metadata (pyproject.toml): finished with status 'done' 22:03:37 Requirement already satisfied: omero-py in ./.venv3/lib/python3.9/site-packages (from omero-dropbox==5.6.3.dev0) (5.19.0) 22:03:37 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (1.26.18) 22:03:37 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (1.4.4) 22:03:37 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (1.0.0) 22:03:37 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (1.26.4) 22:03:37 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (10.2.0) 22:03:37 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (6.0.1) 22:03:37 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (3.6.5) 22:03:37 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (2.31.0) 22:03:37 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (2.8.2) 22:03:37 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.6.3.dev0) (3.3.2) 22:03:37 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.6.3.dev0) (3.6) 22:03:37 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.6.3.dev0) (2024.2.2) 22:03:37 Building wheels for collected packages: omero-dropbox 22:03:37 Building wheel for omero-dropbox (pyproject.toml): started 22:03:37 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done' 22:03:37 Created wheel for omero-dropbox: filename=omero_dropbox-5.6.3.dev0-py3-none-any.whl size=49057 sha256=21adfbc64aae6149e8d71bc321a350f43f32d34761427e48a2649ddcc605779d 22:03:37 Stored in directory: /home/omero/.cache/pip/wheels/a5/63/29/4452e52704e5ad491f397a0013b20ebb9d413ceb110f8101d1 22:03:37 Successfully built omero-dropbox 22:03:38 Installing collected packages: omero-dropbox 22:03:38 Successfully installed omero-dropbox-5.6.3.dev0 22:03:38 + for x in *.tar.gz 22:03:38 + pip install -U omero_marshal-0.9.1.dev0.tar.gz 22:03:38 Processing ./omero_marshal-0.9.1.dev0.tar.gz 22:03:38 Installing build dependencies: started 22:03:40 Installing build dependencies: finished with status 'done' 22:03:40 Getting requirements to build wheel: started 22:03:40 Getting requirements to build wheel: finished with status 'done' 22:03:40 Installing backend dependencies: started 22:03:41 Installing backend dependencies: finished with status 'done' 22:03:41 Preparing metadata (pyproject.toml): started 22:03:41 Preparing metadata (pyproject.toml): finished with status 'done' 22:03:41 Building wheels for collected packages: omero_marshal 22:03:41 Building wheel for omero_marshal (pyproject.toml): started 22:03:41 Building wheel for omero_marshal (pyproject.toml): finished with status 'done' 22:03:41 Created wheel for omero_marshal: filename=omero_marshal-0.9.1.dev0-py3-none-any.whl size=88031 sha256=3e650baf9e2c93704fbe41a81b2e9eebef840637c915f8a48172453228da3320 22:03:41 Stored in directory: /home/omero/.cache/pip/wheels/8b/40/f1/dbed071eff57c96e0824ead2a420a7a1a080f7fbdfe0431d7f 22:03:41 Successfully built omero_marshal 22:03:41 Installing collected packages: omero_marshal 22:03:42 Successfully installed omero_marshal-0.9.1.dev0 22:03:42 + for x in *.tar.gz 22:03:42 + pip install -U omero-py-5.19.1.dev0.tar.gz 22:03:42 Processing ./omero-py-5.19.1.dev0.tar.gz 22:03:42 Installing build dependencies: started 22:03:44 Installing build dependencies: finished with status 'done' 22:03:44 Getting requirements to build wheel: started 22:03:44 Getting requirements to build wheel: finished with status 'done' 22:03:44 Installing backend dependencies: started 22:03:45 Installing backend dependencies: finished with status 'done' 22:03:45 Preparing metadata (pyproject.toml): started 22:03:45 Preparing metadata (pyproject.toml): finished with status 'done' 22:03:45 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (1.26.18) 22:03:45 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (1.4.4) 22:03:45 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (1.0.0) 22:03:45 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (1.26.4) 22:03:45 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (10.2.0) 22:03:45 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (6.0.1) 22:03:45 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (3.6.5) 22:03:45 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (2.31.0) 22:03:45 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (2.8.2) 22:03:45 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.1.dev0) (3.3.2) 22:03:45 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.1.dev0) (3.6) 22:03:45 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.1.dev0) (2024.2.2) 22:03:45 Building wheels for collected packages: omero-py 22:03:45 Building wheel for omero-py (pyproject.toml): started 22:03:46 Building wheel for omero-py (pyproject.toml): finished with status 'done' 22:03:46 Created wheel for omero-py: filename=omero_py-5.19.1.dev0-py3-none-any.whl size=2781680 sha256=e1abee2ec05aab471fbdca3acdcc0115c6978db606080751962edac32670a2a2 22:03:46 Stored in directory: /home/omero/.cache/pip/wheels/52/ce/ea/f5d1427ab67c2783e3f124f0ebf8311109c5ac331893a591ad 22:03:46 Successfully built omero-py 22:03:47 Installing collected packages: omero-py 22:03:47 Attempting uninstall: omero-py 22:03:47 Found existing installation: omero-py 5.19.0 22:03:47 Uninstalling omero-py-5.19.0: 22:03:47 Successfully uninstalled omero-py-5.19.0 22:03:49 Successfully installed omero-py-5.19.1.dev0 22:03:49 + for x in *.tar.gz 22:03:49 + pip install -U omero-scripts-5.8.1.dev0.tar.gz 22:03:49 Processing ./omero-scripts-5.8.1.dev0.tar.gz 22:03:50 Installing build dependencies: started 22:03:51 Installing build dependencies: finished with status 'done' 22:03:51 Getting requirements to build wheel: started 22:03:51 Getting requirements to build wheel: finished with status 'done' 22:03:51 Installing backend dependencies: started 22:03:52 Installing backend dependencies: finished with status 'done' 22:03:52 Preparing metadata (pyproject.toml): started 22:03:52 Preparing metadata (pyproject.toml): finished with status 'done' 22:03:52 Building wheels for collected packages: omero-scripts 22:03:52 Building wheel for omero-scripts (pyproject.toml): started 22:03:53 Building wheel for omero-scripts (pyproject.toml): finished with status 'done' 22:03:53 Created wheel for omero-scripts: filename=omero_scripts-5.8.1.dev0-py3-none-any.whl size=116570 sha256=146ac9f31b2bda93bcb412cf0fa4cd74aae4821dbc8a9841861ecae64b37ad00 22:03:53 Stored in directory: /home/omero/.cache/pip/wheels/ef/a0/80/e3393129cedc64a3ad2b8c2fa437d83a3d318cba65d425f5cf 22:03:53 Successfully built omero-scripts 22:03:53 Installing collected packages: omero-scripts 22:03:53 Successfully installed omero-scripts-5.8.1.dev0 22:03:53 + for x in *.tar.gz 22:03:53 + pip install -U omero-web-5.25.1.dev0.tar.gz 22:03:53 Processing ./omero-web-5.25.1.dev0.tar.gz 22:03:54 Installing build dependencies: started 22:03:55 Installing build dependencies: finished with status 'done' 22:03:55 Getting requirements to build wheel: started 22:03:55 Getting requirements to build wheel: finished with status 'done' 22:03:55 Installing backend dependencies: started 22:03:56 Installing backend dependencies: finished with status 'done' 22:03:56 Preparing metadata (pyproject.toml): started 22:03:57 Preparing metadata (pyproject.toml): finished with status 'done' 22:03:57 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (5.19.1.dev0) 22:03:57 Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.25.1.dev0) 22:03:57 Using cached concurrent_log_handler-0.9.25-py3-none-any.whl.metadata (17 kB) 22:03:57 Collecting Django<4.3,>=4.2.3 (from omero-web==5.25.1.dev0) 22:03:57 Using cached Django-4.2.11-py3-none-any.whl.metadata (4.2 kB) 22:03:57 Collecting django-pipeline==2.1.0 (from omero-web==5.25.1.dev0) 22:03:57 Using cached django_pipeline-2.1.0-py3-none-any.whl.metadata (12 kB) 22:03:57 Collecting django-cors-headers==3.7.0 (from omero-web==5.25.1.dev0) 22:03:57 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB) 22:03:57 Collecting django-csp (from omero-web==5.25.1.dev0) 22:03:57 Using cached django_csp-3.8-py3-none-any.whl.metadata (2.7 kB) 22:03:57 Collecting whitenoise>=5.3.0 (from omero-web==5.25.1.dev0) 22:03:57 Using cached whitenoise-6.6.0-py3-none-any.whl.metadata (3.7 kB) 22:03:57 Collecting gunicorn>=19.3 (from omero-web==5.25.1.dev0) 22:03:57 Using cached gunicorn-21.2.0-py3-none-any.whl.metadata (4.1 kB) 22:03:57 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (0.9.1.dev0) 22:03:57 Requirement already satisfied: Pillow in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (10.2.0) 22:03:57 Requirement already satisfied: pytz in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (2024.1) 22:03:57 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (2.8.2) 22:03:57 Requirement already satisfied: packaging in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (24.0) 22:03:58 Collecting asgiref<4,>=3.6.0 (from Django<4.3,>=4.2.3->omero-web==5.25.1.dev0) 22:03:58 Using cached asgiref-3.8.0-py3-none-any.whl.metadata (9.3 kB) 22:03:58 Collecting sqlparse>=0.3.1 (from Django<4.3,>=4.2.3->omero-web==5.25.1.dev0) 22:03:58 Using cached sqlparse-0.4.4-py3-none-any.whl.metadata (4.0 kB) 22:03:58 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (1.26.18) 22:03:58 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (1.4.4) 22:03:58 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (1.0.0) 22:03:58 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (1.26.4) 22:03:58 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (6.0.1) 22:03:58 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (3.6.5) 22:03:58 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (2.31.0) 22:03:58 Collecting typing-extensions>=4 (from asgiref<4,>=3.6.0->Django<4.3,>=4.2.3->omero-web==5.25.1.dev0) 22:03:58 Using cached typing_extensions-4.10.0-py3-none-any.whl.metadata (3.0 kB) 22:03:58 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.25.1.dev0) (3.3.2) 22:03:58 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.25.1.dev0) (3.6) 22:03:58 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.25.1.dev0) (2024.2.2) 22:03:58 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB) 22:03:58 Using cached django_pipeline-2.1.0-py3-none-any.whl (38 kB) 22:03:58 Using cached concurrent_log_handler-0.9.25-py3-none-any.whl (25 kB) 22:03:58 Using cached Django-4.2.11-py3-none-any.whl (8.0 MB) 22:03:59 Using cached gunicorn-21.2.0-py3-none-any.whl (80 kB) 22:03:59 Using cached whitenoise-6.6.0-py3-none-any.whl (19 kB) 22:03:59 Using cached django_csp-3.8-py3-none-any.whl (17 kB) 22:03:59 Using cached asgiref-3.8.0-py3-none-any.whl (23 kB) 22:03:59 Using cached sqlparse-0.4.4-py3-none-any.whl (41 kB) 22:03:59 Using cached typing_extensions-4.10.0-py3-none-any.whl (33 kB) 22:03:59 Building wheels for collected packages: omero-web 22:03:59 Building wheel for omero-web (pyproject.toml): started 22:04:00 Building wheel for omero-web (pyproject.toml): finished with status 'done' 22:04:00 Created wheel for omero-web: filename=omero_web-5.25.1.dev0-py3-none-any.whl size=2769903 sha256=c30881892efc009d6046aaa1bdc8d6be8d11814bc372ea7c65fd5c4332b0f797 22:04:00 Stored in directory: /home/omero/.cache/pip/wheels/c5/4f/aa/011f4ecfdcda915571d213b068a736fbddf1b36b2e590de11a 22:04:00 Successfully built omero-web 22:04:00 Installing collected packages: django-pipeline, whitenoise, typing-extensions, sqlparse, gunicorn, concurrent-log-handler, asgiref, Django, django-csp, django-cors-headers, omero-web 22:04:03 Successfully installed Django-4.2.11 asgiref-3.8.0 concurrent-log-handler-0.9.25 django-cors-headers-3.7.0 django-csp-3.8 django-pipeline-2.1.0 gunicorn-21.2.0 omero-web-5.25.1.dev0 sqlparse-0.4.4 typing-extensions-4.10.0 whitenoise-6.6.0 22:04:04 + wget https://github.com/snoopycrimecop/omero-figure/blob/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 22:04:04 --2024-03-21 22:04:04-- https://github.com/snoopycrimecop/omero-figure/blob/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 22:04:04 Resolving github.com (github.com)... 140.82.121.3 22:04:04 Connecting to github.com (github.com)|140.82.121.3|:443... connected. 22:04:04 HTTP request sent, awaiting response... 200 OK 22:04:04 Length: 532795 (520K) [text/plain] 22:04:04 Saving to: ‘Figure_To_Pdf.py’ 22:04:04 22:04:04 0K .......... .......... .......... .......... .......... 9% 1020K 0s 22:04:04 50K .......... .......... .......... .......... .......... 19% 2.01M 0s 22:04:04 100K .......... .......... .......... .......... .......... 28% 2.08M 0s 22:04:04 150K .......... .......... .......... .......... .......... 38% 45.8M 0s 22:04:04 200K .......... .......... .......... .......... .......... 48% 46.1M 0s 22:04:04 250K .......... .......... .......... .......... .......... 57% 56.6M 0s 22:04:04 300K .......... .......... .......... .......... .......... 67% 2.21M 0s 22:04:05 350K .......... .......... .......... .......... .......... 76% 41.2M 0s 22:04:05 400K .......... .......... .......... .......... .......... 86% 37.5M 0s 22:04:05 450K .......... .......... .......... .......... .......... 96% 55.7M 0s 22:04:05 500K .......... .......... 100% 55.5M=0.1s 22:04:05 22:04:05 2024-03-21 22:04:05 (4.05 MB/s) - ‘Figure_To_Pdf.py’ saved [532795/532795] 22:04:05 22:04:05 + mv Figure_To_Pdf.py /home/omero/workspace/OMERO-server/OMERO.server/lib/scripts/omero/figure_scripts/ 22:04:05 + omero config set omero.db.name OMERO-server 22:04:06 + omero config set omero.db.host pg 22:04:07 + omero config set omero.db.user postgres 22:04:08 + omero config set omero.data.dir /home/omero/omero-server-data 22:04:10 + omero config set omero.fs.repo.path %user%_%userId%/%thread%//%year%-%month%/%day%/%time% 22:04:11 + omero config set omero.db.poolsize 25 22:04:12 + omero config set omero.security.trustStore /etc/pki/ca-trust/extracted/java/cacerts 22:04:14 + omero config set omero.security.trustStorePassword changeit 22:04:15 + omero config set omero.mail.config true 22:04:16 + omero config set omero.mail.from qa@openmicroscopy.org.uk 22:04:17 + omero config set omero.mail.host smtp.dundee.ac.uk 22:04:19 + omero certificates 22:04:20 OpenSSL 3.0.7 1 Nov 2022 (Library: OpenSSL 3.0.7 1 Nov 2022) 22:04:20 certificates created: /home/omero/omero-server-data/certs/server.pem /home/omero/omero-server-data/certs/server.p12 22:04:20 + '[' false = true ']' 22:04:20 + echo 'Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade' 22:04:20 Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade 22:04:20 + omego db -vvv upgrade --serverdir /home/omero/workspace/OMERO-server/OMERO.server --dbname OMERO-server 22:04:20 2024-03-21 22:04:20,641 [ omego.db] DEBUG dbcommand => upgrade 22:04:20 2024-03-21 22:04:20,641 [ omego.db] DEBUG dbhost => localhost 22:04:20 2024-03-21 22:04:20,641 [ omego.db] DEBUG dbname => OMERO-server 22:04:20 2024-03-21 22:04:20,641 [ omego.db] DEBUG dbpass => omero 22:04:20 2024-03-21 22:04:20,641 [ omego.db] DEBUG dbuser => omero 22:04:20 2024-03-21 22:04:20,641 [ omego.db] DEBUG rootpass => omero 22:04:20 2024-03-21 22:04:20,641 [ omego.db] DEBUG serverdir => /home/omero/workspace/OMERO-server/OMERO.server 22:04:20 2024-03-21 22:04:20,642 [omego.extern] INFO Executing : omero version 22:04:21 OMERO.py version: 22:04:21 OMERO.server version: 22:04:21 5.6.3-437-854b934e23-ice36 22:04:21 5.19.1.dev0 22:04:22 2024-03-21 22:04:22,013 [omego.extern] INFO Completed [1.371 s] 22:04:22 2024-03-21 22:04:22,013 [omego.extern] DEBUG Using omero CLI from omero 22:04:22 2024-03-21 22:04:22,013 [ omego.db] INFO DbAdmin: DbAdmin /home/omero/workspace/OMERO-server/OMERO.server ... 22:04:22 2024-03-21 22:04:22,013 [omego.extern] INFO Running [current environment]: omero config get --show-password 22:04:22 2024-03-21 22:04:22,013 [omego.extern] INFO Executing : omero config get --show-password 22:04:23 2024-03-21 22:04:23,325 [omego.extern] INFO Completed [1.312 s] 22:04:23 2024-03-21 22:04:23,326 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero 22:04:23 2024-03-21 22:04:23,326 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t --version 22:04:23 2024-03-21 22:04:23,387 [omego.extern] INFO Completed [0.061 s] 22:04:23 2024-03-21 22:04:23,388 [ omego.db] DEBUG stdout: b'psql (PostgreSQL) 16.2\n' 22:04:23 2024-03-21 22:04:23,388 [ omego.db] INFO psql version: psql (PostgreSQL) 16.2 22:04:23 22:04:23 2024-03-21 22:04:23,388 [omego.extern] INFO Running [current environment]: omero config get --show-password 22:04:23 2024-03-21 22:04:23,388 [omego.extern] INFO Executing : omero config get --show-password 22:04:24 2024-03-21 22:04:24,655 [omego.extern] INFO Completed [1.267 s] 22:04:24 2024-03-21 22:04:24,655 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero 22:04:24 2024-03-21 22:04:24,655 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c \conninfo 22:04:24 2024-03-21 22:04:24,689 [omego.extern] INFO Completed [0.034 s] 22:04:24 2024-03-21 22:04:24,690 [ omego.db] DEBUG stdout: b'You are connected to database "OMERO-server" as user "postgres" on host "pg" (address "172.18.0.4") at port "5432".\n' 22:04:24 2024-03-21 22:04:24,690 [ omego.db] DEBUG Executing query: SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1 22:04:24 2024-03-21 22:04:24,690 [omego.extern] INFO Running [current environment]: omero config get --show-password 22:04:24 2024-03-21 22:04:24,690 [omego.extern] INFO Executing : omero config get --show-password 22:04:25 2024-03-21 22:04:25,946 [omego.extern] INFO Completed [1.256 s] 22:04:25 2024-03-21 22:04:25,946 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero 22:04:25 2024-03-21 22:04:25,947 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1 22:04:25 2024-03-21 22:04:25,958 [omego.extern] INFO Completed [0.011 s] 22:04:25 2024-03-21 22:04:25,958 [ omego.db] DEBUG stdout: b'OMERO5.4|0\n' 22:04:25 2024-03-21 22:04:25,958 [ omego.db] INFO Current omero db version: ('OMERO5.4', '0') 22:04:25 2024-03-21 22:04:25,960 [ omego.db] INFO Database is already at OMERO5.4__0 22:04:25 + export LANG=en_US.UTF-8 22:04:25 + LANG=en_US.UTF-8 22:04:25 + export LANGUAGE=en_US:en 22:04:25 + LANGUAGE=en_US:en 22:04:25 + export LC_ALL=en_US.UTF-8 22:04:25 + LC_ALL=en_US.UTF-8 22:04:25 + BUILD_ID=DONT_KILL_ME 22:04:25 + omero admin start 22:04:35 No descriptor given. Using etc/grid/default.xml 22:04:44 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/master 22:04:44 Initializing /home/omero/workspace/OMERO-server/OMERO.server/var/log 22:04:44 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/registry 22:04:44 Waiting on startup. Use CTRL-C to exit 22:04:44 + omero admin waitup 22:04:45 Waiting on startup. Use CTRL-C to exit 22:04:45 + omero admin diagnostics 22:04:46 22:04:46 ================================================================================ 22:04:46 OMERO Diagnostics (admin) 22:04:46 ================================================================================ 22:04:46 22:04:46 Commands: java -version 11.0.22 (/usr/bin/java) 22:04:47 Commands: python -V 3.9.18 (/home/omero/workspace/OMERO-server/.venv3/bin/python) 22:04:47 Commands: icegridnode --version 3.6.5 (/opt/ice-3.6.5/bin/icegridnode) 22:04:47 Commands: icegridadmin --version 3.6.5 (/opt/ice-3.6.5/bin/icegridadmin) 22:04:47 Commands: psql --version 16.2 (/usr/bin/psql) 22:04:47 Commands: openssl version 3.0.71 (/usr/bin/openssl) 22:04:47 22:04:47 Component: OMERO.py 5.19.1.dev0 22:04:47 Component: OMERO.server 5.6.3-437-854b934e23-ice36 22:04:47 22:04:47 Server: icegridnode running 22:04:47 Server: Blitz-0 active (pid = 226022, enabled) 22:04:47 Server: DropBox activating (enabled) 22:04:47 Server: FileServer active (pid = 226119, enabled) 22:04:47 Server: Indexer-0 activating (enabled) 22:04:47 Server: MonitorServer active (pid = 226058, enabled) 22:04:47 Server: OMERO.Glacier2 active (pid = 226077, enabled) 22:04:47 Server: OMERO.IceStorm active (pid = 226103, enabled) 22:04:47 Server: PixelData-0 activating (enabled) 22:04:47 Server: Processor-0 activating (enabled) 22:04:47 Server: Tables-0 activating (enabled) 22:04:47 Server: TestDropBox inactive (enabled) 22:04:47 22:04:47 Log dir: /home/omero/workspace/OMERO-server/OMERO.server/var/log exists 22:04:47 Log files: Blitz-0.log 31.1 KB errors=0 warnings=5 22:04:47 Log files: DropBox.log 1.2 KB 22:04:47 Log files: FileServer.log 114 B 22:04:47 Log files: Indexer-0.log 114 B 22:04:47 Log files: MonitorServer.log 1.1 KB 22:04:47 Log files: PixelData-0.log 114 B 22:04:47 Log files: Processor-0.log 281 B 22:04:47 Log files: Tables-0.log 281 B 22:04:47 Log files: TestDropBox.log n/a 22:04:47 Log files: master.err 869 B 22:04:47 Log files: master.out 41.5 KB 22:04:47 Log files: Total size 0.08 MB 22:04:47 22:04:47 22:04:47 Environment:OMERO_HOME=(unset) 22:04:47 Environment:OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server 22:04:47 Environment:OMERO_NODE=(unset) 22:04:47 Environment:OMERO_MASTER=(unset) 22:04:47 Environment:OMERO_USERDIR=(unset) 22:04:47 Environment:OMERO_TMPDIR=(unset) 22:04:47 Environment:PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 22:04:47 Environment:PYTHONPATH=(unset) 22:04:47 Environment:ICE_HOME=/opt/ice-3.6.5 22:04:47 Environment:LD_LIBRARY_PATH=(unset) 22:04:47 Environment:DYLD_LIBRARY_PATH=(unset) 22:04:47 22:04:47 OMERO SSL port:4064 22:04:47 OMERO TCP port:4063 22:04:47 OMERO data dir:'/home/omero/omero-server-data' Exists? True Is writable? True 22:04:47 OMERO temp dir:'/home/omero/omero/tmp' Exists? True Is writable? True (Size: 0) 22:04:47 22:04:47 JVM settings: Blitz-${index} -Xmx7200m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions 22:04:47 JVM settings: Indexer-${index} -Xmx4800m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions 22:04:47 JVM settings: PixelData-${index} -Xmx7200m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions 22:04:47 JVM settings: Repository-${index} -Xmx4800m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions 22:04:47 22:04:47 Jar: lib/server/formats-api.jar Bio-Formats API 8.0.0-SNAPSHOT 21 March 2024 5c6c3e1ca3aac5f8e55dd5c5693604d128be5965 22:04:47 Jar: lib/server/formats-bsd.jar BSD Bio-Formats readers and writers 8.0.0-SNAPSHOT 21 March 2024 5c6c3e1ca3aac5f8e55dd5c5693604d128be5965 22:04:47 Jar: lib/server/formats-gpl.jar Bio-Formats library 8.0.0-SNAPSHOT 21 March 2024 5c6c3e1ca3aac5f8e55dd5c5693604d128be5965 22:04:47 Jar: lib/server/ome-codecs.jar OME Codecs 1.0.1 8 December 2023 4f6bf7551ed2d1dfe8e74c857f6a694da40d1d97 22:04:47 Jar: lib/server/ome-common.jar OME Common Java 6.0.21 7 December 2023 fdace3279d4f6b682c5ba47ae4c49daac687459b 22:04:47 Jar: lib/server/ome-jai.jar OME JAI 0.1.3 3 August 2018 489959cb7d24c279249bc08181aa9f734158ca4e 22:04:47 Jar: lib/server/ome-mdbtools.jar MDB Tools (Java port) 5.3.2 7 August 2018 68ffca2a95750cbb96f0d11785851aa4a554c0a4 22:04:47 Jar: lib/server/ome-poi.jar OME POI 5.3.7 5 July 2022 79a44040fa896a7c78b4e25da6ba7f4dda204c8e 22:04:47 Jar: lib/server/ome-xml.jar OME XML library 6.3.4 7 December 2023 b4c6f4490d762138453225e0499346a6334f00e5 22:04:47 Jar: lib/server/omero-blitz.jar jar 5.7.3-SNAPSHOT 22:04:47 Jar: lib/server/omero-common.jar jar 5.6.5-SNAPSHOT 22:04:47 Jar: lib/server/omero-gateway.jar jar 5.9.1-SNAPSHOT 22:04:47 Jar: lib/server/omero-model.jar jar 5.6.14-SNAPSHOT 22:04:47 Jar: lib/server/omero-renderer.jar jar 5.5.16-SNAPSHOT 22:04:47 Jar: lib/server/omero-romio.jar jar 5.7.6-SNAPSHOT 22:04:47 Jar: lib/server/omero-server.jar jar 5.6.11-SNAPSHOT 22:04:47 + deactivate 22:04:47 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']' 22:04:47 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 22:04:47 + export PATH 22:04:47 + unset _OLD_VIRTUAL_PATH 22:04:47 + '[' -n '' ']' 22:04:47 + '[' -n /bin/bash -o -n '' ']' 22:04:47 + hash -r 22:04:47 + '[' -n '' ']' 22:04:47 + unset VIRTUAL_ENV 22:04:47 + '[' '!' '' = nondestructive ']' 22:04:47 + unset -f deactivate 22:04:47 Finished: SUCCESS