Started by upstream project "Trigger" build number 411
originally caused by:
 Started by timer
Running as SYSTEM
Building remotely on omero (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-server
[OMERO-server] $ /bin/bash -xe /tmp/jenkins7521099179621837973.sh
+ source /home/settings.env
++ OMERO_DB_HOST=pg
++ OMERO_DB_USER=postgres
++ OMERO_DB_PASS=
++ OMERO_ROOT_PASS=omero
++ OMERO_DATA_DIR=/OMERO
++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
+ OMERO_DB_NAME=OMERO-server
+ OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
+ export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
+ OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
+ OMERO_DATA_DIR=/home/omero/omero-server-data
+ '[' -e /home/omero/workspace/OMERO-server/OMERO.server ']'
+ source /home/omero/workspace/OMERO-server/.venv3/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(.venv3) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ omero admin stop
Server not running
+ echo not running
not running
+ sleep 5
+ deactivate
+ '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
+ PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
+ export PATH
+ unset _OLD_VIRTUAL_PATH
+ '[' -n '' ']'
+ '[' -n /bin/bash -o -n '' ']'
+ hash -r
+ '[' -n '' ']'
+ unset VIRTUAL_ENV
+ '[' '!' '' = nondestructive ']'
+ unset -f deactivate
+ rm -rf /home/omero/workspace/OMERO-server/.venv3
+ python3 -m venv /home/omero/workspace/OMERO-server/.venv3
+ '[' false = true ']'
+ echo 'Skipping PURGE_DATA:CleanDbAndRepo'
Skipping PURGE_DATA:CleanDbAndRepo
+ rm -rf /home/omero/workspace/OMERO-server/omero-blitz-5.8.2-SNAPSHOT-python.zip /home/omero/workspace/OMERO-server/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_marshal-0.9.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_py-5.19.7.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_scripts-5.9.1.dev0.tar.gz /home/omero/workspace/OMERO-server/OMERO.server /home/omero/workspace/OMERO-server/omero_web-5.29.1.dev0.tar.gz /home/omero/workspace/OMERO-server/version.properties
Copied 1 artifact from "OMERO-build" build number 351
Copied 5 artifacts from "OMERO-python-superbuild-build" build number 347
Copied 2 artifacts from "OMERO-build-build" build number 374
[OMERO-server] $ /bin/bash -xe /tmp/jenkins16697347634134061295.sh
+ source /home/settings.env
++ OMERO_DB_HOST=pg
++ OMERO_DB_USER=postgres
++ OMERO_DB_PASS=
++ OMERO_ROOT_PASS=omero
++ OMERO_DATA_DIR=/OMERO
++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
+ OMERO_DB_NAME=OMERO-server
+ OMERO_DATA_DIR=/home/omero/omero-server-data
+ mkdir -p /home/omero/omero-server-data
+ OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
+ export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
+ OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
+ export ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
+ ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
+ export VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
+ VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
++ ls OMERO.server-5.6.3-548-19eb338847-ice36.zip
+ ZIP=OMERO.server-5.6.3-548-19eb338847-ice36.zip
+ '[' '!' -z '' ']'
+ DIST=OMERO.server-5.6.3-548-19eb338847-ice36
+ unzip OMERO.server-5.6.3-548-19eb338847-ice36.zip
Archive:  OMERO.server-5.6.3-548-19eb338847-ice36.zip
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  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/bsd.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/cddl-v1.0.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/cpl-v10.html  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/crystalclear.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/django.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/dom4j.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/epl-v1.0.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/fbsd.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/freemarker.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/gpl-v2.0.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/gpl.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/gtest.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/iconsweets_license.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/jamon.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/jmock.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/jquery.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/jtidy.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/lgpl-3.0.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/lgpl-v2.0.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/lgpl-v2.1.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/lgpl-v3.0.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/lgpl.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/matplotlib.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/mit.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/mpl-v1_0.htm  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/npl-1_1.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/path.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/pil.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/postgresql.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/psf-v2.0.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/psf-v2.5.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/scons.txt  
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  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/tablelayout.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/which.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/zlib-libpng.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/share/licenses/zpl-v2.1.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/README.txt  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/misc/Makefile  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/misc/current.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/misc/enums.py  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO3A__1/OMERO3__7.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO3A__10/OMERO3A__9.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO3A__11/OMERO3A__10.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO3A__11/OMERO3A__5.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO3A__2/OMERO3A__1.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO3A__3/OMERO3A__2.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO3A__3/OMERO3__5.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO3A__4/OMERO3A__3.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO3A__4/OMERO3__5.sql  
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  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO3A__6/OMERO3A__5.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO3A__7/OMERO3A__6.sql  
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  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO3A__9/OMERO3A__8.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO3__4/OMERO3__1.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO3__5/OMERO3__4.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO3__6/OMERO3__5.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO3__7/OMERO3__6.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO4.1__0/OMERO4__0.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO4.2__0/OMERO4.1__0.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO4.3__0/OMERO4.2__0.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO4.4__0/OMERO4.1__0.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO4.4__0/OMERO4.3__0.sql  
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  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO5.1__1/OMERO5.1__0.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO5.2__0/OMERO5.1__1.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO5.3__0/OMERO5.2__0.sql  
  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql  
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  inflating: OMERO.server-5.6.3-548-19eb338847-ice36/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql  
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+ rm -f OMERO.server-5.6.3-548-19eb338847-ice36.zip
+ mv /home/omero/workspace/OMERO-server/OMERO.server-5.6.3-548-19eb338847-ice36 /home/omero/workspace/OMERO-server/OMERO.server
+ source /home/omero/workspace/OMERO-server/.venv3/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(.venv3) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ pip install https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl
Collecting zeroc-ice==3.6.5
  Downloading https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl (31.3 MB)
Installing collected packages: zeroc-ice
Successfully installed zeroc-ice-3.6.5
+ pip install -U pip future
Requirement already satisfied: pip in ./.venv3/lib/python3.9/site-packages (21.2.3)
Collecting pip
  Using cached pip-25.0.1-py3-none-any.whl (1.8 MB)
Collecting future
  Using cached future-1.0.0-py3-none-any.whl (491 kB)
Installing collected packages: pip, future
  Attempting uninstall: pip
    Found existing installation: pip 21.2.3
    Uninstalling pip-21.2.3:
      Successfully uninstalled pip-21.2.3
Successfully installed future-1.0.0 pip-25.0.1
+ pip install markdown
Collecting markdown
  Using cached Markdown-3.7-py3-none-any.whl.metadata (7.0 kB)
Collecting importlib-metadata>=4.4 (from markdown)
  Using cached importlib_metadata-8.6.1-py3-none-any.whl.metadata (4.7 kB)
Collecting zipp>=3.20 (from importlib-metadata>=4.4->markdown)
  Using cached zipp-3.21.0-py3-none-any.whl.metadata (3.7 kB)
Using cached Markdown-3.7-py3-none-any.whl (106 kB)
Using cached importlib_metadata-8.6.1-py3-none-any.whl (26 kB)
Using cached zipp-3.21.0-py3-none-any.whl (9.6 kB)
Installing collected packages: zipp, importlib-metadata, markdown
Successfully installed importlib-metadata-8.6.1 markdown-3.7 zipp-3.21.0
+ pip install reportlab
Collecting reportlab
  Using cached reportlab-4.3.1-py3-none-any.whl.metadata (1.7 kB)
Collecting pillow>=9.0.0 (from reportlab)
  Using cached pillow-11.1.0-cp39-cp39-manylinux_2_28_x86_64.whl.metadata (9.1 kB)
Collecting chardet (from reportlab)
  Using cached chardet-5.2.0-py3-none-any.whl.metadata (3.4 kB)
Using cached reportlab-4.3.1-py3-none-any.whl (1.9 MB)
Using cached pillow-11.1.0-cp39-cp39-manylinux_2_28_x86_64.whl (4.5 MB)
Using cached chardet-5.2.0-py3-none-any.whl (199 kB)
Installing collected packages: pillow, chardet, reportlab
Successfully installed chardet-5.2.0 pillow-11.1.0 reportlab-4.3.1
+ pip install omego
Collecting omego
  Using cached omego-0.7.0-py3-none-any.whl
Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omego) (1.0.0)
Collecting yaclifw>=0.1.1 (from omego)
  Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting six (from yaclifw>=0.1.1->omego)
  Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Installing collected packages: six, yaclifw, omego
Successfully installed omego-0.7.0 six-1.17.0 yaclifw-0.2.0
+ pip install tables
Collecting tables
  Using cached tables-3.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.3 kB)
Collecting numpy>=1.19.0 (from tables)
  Using cached numpy-2.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (60 kB)
Collecting numexpr>=2.6.2 (from tables)
  Using cached numexpr-2.10.2-cp39-cp39-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (8.1 kB)
Collecting packaging (from tables)
  Using cached packaging-24.2-py3-none-any.whl.metadata (3.2 kB)
Collecting py-cpuinfo (from tables)
  Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes)
Collecting blosc2>=2.3.0 (from tables)
  Using cached blosc2-2.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (9.2 kB)
Collecting ndindex>=1.4 (from blosc2>=2.3.0->tables)
  Using cached ndindex-1.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.4 kB)
Collecting msgpack (from blosc2>=2.3.0->tables)
  Using cached msgpack-1.1.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (8.4 kB)
Using cached tables-3.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (7.5 MB)
Using cached blosc2-2.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (4.4 MB)
Using cached numexpr-2.10.2-cp39-cp39-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (396 kB)
Using cached numpy-2.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (19.5 MB)
Using cached packaging-24.2-py3-none-any.whl (65 kB)
Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB)
Using cached ndindex-1.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (478 kB)
Using cached msgpack-1.1.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (377 kB)
Installing collected packages: py-cpuinfo, packaging, numpy, ndindex, msgpack, numexpr, blosc2, tables
Successfully installed blosc2-2.5.1 msgpack-1.1.0 ndindex-1.9.2 numexpr-2.10.2 numpy-2.0.2 packaging-24.2 py-cpuinfo-9.0.0 tables-3.9.2
+ pip install jinja2
Collecting jinja2
  Using cached jinja2-3.1.6-py3-none-any.whl.metadata (2.9 kB)
Collecting MarkupSafe>=2.0 (from jinja2)
  Using cached MarkupSafe-3.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (4.0 kB)
Using cached jinja2-3.1.6-py3-none-any.whl (134 kB)
Using cached MarkupSafe-3.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (20 kB)
Installing collected packages: MarkupSafe, jinja2
Successfully installed MarkupSafe-3.0.2 jinja2-3.1.6
+ pip install omero-py
Collecting omero-py
  Using cached omero_py-5.19.6-py3-none-any.whl.metadata (6.4 kB)
Collecting urllib3<2 (from omero-py)
  Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting appdirs (from omero-py)
  Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py) (1.0.0)
Collecting numpy<2 (from omero-py)
  Using cached numpy-1.26.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (61 kB)
Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py) (11.1.0)
Collecting PyYAML (from omero-py)
  Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py) (3.6.5)
Collecting requests (from omero-py)
  Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
Collecting portalocker (from omero-py)
  Using cached portalocker-3.1.1-py3-none-any.whl.metadata (8.6 kB)
Collecting charset-normalizer<4,>=2 (from requests->omero-py)
  Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB)
Collecting idna<4,>=2.5 (from requests->omero-py)
  Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
Collecting certifi>=2017.4.17 (from requests->omero-py)
  Using cached certifi-2025.1.31-py3-none-any.whl.metadata (2.5 kB)
Using cached omero_py-5.19.6-py3-none-any.whl (2.8 MB)
Using cached numpy-1.26.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (18.2 MB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
Using cached portalocker-3.1.1-py3-none-any.whl (19 kB)
Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB)
Using cached requests-2.32.3-py3-none-any.whl (64 kB)
Using cached certifi-2025.1.31-py3-none-any.whl (166 kB)
Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (146 kB)
Using cached idna-3.10-py3-none-any.whl (70 kB)
Installing collected packages: appdirs, urllib3, PyYAML, portalocker, numpy, idna, charset-normalizer, certifi, requests, omero-py
  Attempting uninstall: numpy
    Found existing installation: numpy 2.0.2
    Uninstalling numpy-2.0.2:
      Successfully uninstalled numpy-2.0.2
Successfully installed PyYAML-6.0.2 appdirs-1.4.4 certifi-2025.1.31 charset-normalizer-3.4.1 idna-3.10 numpy-1.26.4 omero-py-5.19.6 portalocker-3.1.1 requests-2.32.3 urllib3-1.26.20
+ pip install git+https://github.com/snoopycrimecop/omero-metadata.git@merge_ci#egg=omero-metadata
Collecting omero-metadata
  Cloning https://github.com/snoopycrimecop/omero-metadata.git (to revision merge_ci) to /tmp/pip-install-voo5iv3e/omero-metadata_4701abd74dbf41e29a9fed5743860433
  Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-metadata.git /tmp/pip-install-voo5iv3e/omero-metadata_4701abd74dbf41e29a9fed5743860433
  Resolved https://github.com/snoopycrimecop/omero-metadata.git to commit 7d3023c6f566fd30066dacd0ebd3a07abf71992f
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-metadata) (5.19.6)
Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-metadata) (6.0.2)
Requirement already satisfied: jinja2 in ./.venv3/lib/python3.9/site-packages (from omero-metadata) (3.1.6)
Collecting pandas (from omero-metadata)
  Using cached pandas-2.2.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (89 kB)
Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.26.20)
Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.4.4)
Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.0.0)
Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.26.4)
Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (11.1.0)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (3.6.5)
Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (2.32.3)
Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (3.1.1)
Requirement already satisfied: MarkupSafe>=2.0 in ./.venv3/lib/python3.9/site-packages (from jinja2->omero-metadata) (3.0.2)
Collecting python-dateutil>=2.8.2 (from pandas->omero-metadata)
  Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB)
Collecting pytz>=2020.1 (from pandas->omero-metadata)
  Using cached pytz-2025.1-py2.py3-none-any.whl.metadata (22 kB)
Collecting tzdata>=2022.7 (from pandas->omero-metadata)
  Using cached tzdata-2025.1-py2.py3-none-any.whl.metadata (1.4 kB)
Requirement already satisfied: six>=1.5 in ./.venv3/lib/python3.9/site-packages (from python-dateutil>=2.8.2->pandas->omero-metadata) (1.17.0)
Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.4.1)
Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.10)
Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2025.1.31)
Using cached pandas-2.2.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (13.1 MB)
Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB)
Using cached pytz-2025.1-py2.py3-none-any.whl (507 kB)
Using cached tzdata-2025.1-py2.py3-none-any.whl (346 kB)
Building wheels for collected packages: omero-metadata
  Building wheel for omero-metadata (pyproject.toml): started
  Building wheel for omero-metadata (pyproject.toml): finished with status 'done'
  Created wheel for omero-metadata: filename=omero_metadata-0.13.1.dev0-py3-none-any.whl size=39281 sha256=e3f518b953a75d9f680782ba32ec452a0c7abc7282459de1e692192c87f246a3
  Stored in directory: /tmp/pip-ephem-wheel-cache-u2enxpks/wheels/64/09/47/3b86b706f8f6f4bec1b7fd6641d2e4a09814e754fa4c85c82d
Successfully built omero-metadata
Installing collected packages: pytz, tzdata, python-dateutil, pandas, omero-metadata
Successfully installed omero-metadata-0.13.1.dev0 pandas-2.2.3 python-dateutil-2.9.0.post0 pytz-2025.1 tzdata-2025.1
+ pip install git+https://github.com/snoopycrimecop/omero-cli-render.git@merge_ci#egg=omero-cli-render
Collecting omero-cli-render
  Cloning https://github.com/snoopycrimecop/omero-cli-render.git (to revision merge_ci) to /tmp/pip-install-jj05r383/omero-cli-render_b4b759f15f1f4d78a932f9301c428679
  Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-render.git /tmp/pip-install-jj05r383/omero-cli-render_b4b759f15f1f4d78a932f9301c428679
  Running command git checkout -b merge_ci --track origin/merge_ci
  Switched to a new branch 'merge_ci'
  branch 'merge_ci' set up to track 'origin/merge_ci'.
  Resolved https://github.com/snoopycrimecop/omero-cli-render.git to commit 97f77d1d41134457d7ed92a6ed99ebd627133996
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-cli-render) (6.0.2)
Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-cli-render) (5.19.6)
Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.26.20)
Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.4.4)
Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.0.0)
Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.26.4)
Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (11.1.0)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.6.5)
Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.32.3)
Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.1.1)
Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.4.1)
Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.10)
Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2025.1.31)
Building wheels for collected packages: omero-cli-render
  Building wheel for omero-cli-render (pyproject.toml): started
  Building wheel for omero-cli-render (pyproject.toml): finished with status 'done'
  Created wheel for omero-cli-render: filename=omero_cli_render-0.8.2.dev0-py3-none-any.whl size=19594 sha256=b3252b887c6d57153e9558501f898dece5c0417c42e87d21474f9d6eb94b5728
  Stored in directory: /tmp/pip-ephem-wheel-cache-1y37klpf/wheels/58/32/1b/746489b3c7c17a98c6cd7195bdd3b426dd4137caeb1045a994
Successfully built omero-cli-render
Installing collected packages: omero-cli-render
Successfully installed omero-cli-render-0.8.2.dev0
+ pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate
Collecting omero-cli-duplicate
  Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-xae4rcwf/omero-cli-duplicate_97e40a3565a84f23b5e557cddd703e6a
  Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-xae4rcwf/omero-cli-duplicate_97e40a3565a84f23b5e557cddd703e6a
  Running command git checkout -b merge_ci --track origin/merge_ci
  Switched to a new branch 'merge_ci'
  branch 'merge_ci' set up to track 'origin/merge_ci'.
  Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit 54fb16ea1f489fe4ca82094792a53db79b8bc1a3
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib/python3.9/site-packages (from omero-cli-duplicate) (5.19.6)
Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.26.20)
Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4)
Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0)
Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.26.4)
Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (11.1.0)
Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.2)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5)
Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.32.3)
Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.1.1)
Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.4.1)
Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.10)
Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2025.1.31)
Building wheels for collected packages: omero-cli-duplicate
  Building wheel for omero-cli-duplicate (pyproject.toml): started
  Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done'
  Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11540 sha256=c268d5e35c18b0fd2f8a95cca12929835a3d7b27076a0b7af0b0e603ea4f6edf
  Stored in directory: /tmp/pip-ephem-wheel-cache-yxx0nw8a/wheels/f1/55/ac/0cb8b093a4c417e5157143839711e7613efa64eaa21c29ef84
Successfully built omero-cli-duplicate
Installing collected packages: omero-cli-duplicate
Successfully installed omero-cli-duplicate-0.4.1.dev0
+ pip install omero-certificates
Collecting omero-certificates
  Using cached omero_certificates-0.4.0-py3-none-any.whl.metadata (3.3 kB)
Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-certificates) (5.19.6)
Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.26.20)
Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4)
Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0)
Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.26.4)
Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (11.1.0)
Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.2)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5)
Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (2.32.3)
Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (3.1.1)
Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.4.1)
Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.10)
Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2025.1.31)
Using cached omero_certificates-0.4.0-py3-none-any.whl (11 kB)
Installing collected packages: omero-certificates
Successfully installed omero-certificates-0.4.0
+ for x in *.tar.gz
+ pip install -U omero_dropbox-5.7.1.dev0.tar.gz
Processing ./omero_dropbox-5.7.1.dev0.tar.gz
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: omero-py in ./.venv3/lib/python3.9/site-packages (from omero-dropbox==5.7.1.dev0) (5.19.6)
Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.26.20)
Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.26.4)
Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (11.1.0)
Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.2)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.32.3)
Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.1.1)
Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.1)
Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.10)
Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2025.1.31)
Building wheels for collected packages: omero-dropbox
  Building wheel for omero-dropbox (pyproject.toml): started
  Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
  Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49138 sha256=ff293f355ab90e40b7466a348d85ee7bcb3a008eb0ae4a500df929981bd2a6cf
  Stored in directory: /home/omero/.cache/pip/wheels/eb/76/85/58476368b176f793423899407c96293c22f9c9edc28cf54079
Successfully built omero-dropbox
Installing collected packages: omero-dropbox
Successfully installed omero-dropbox-5.7.1.dev0
+ for x in *.tar.gz
+ pip install -U omero_marshal-0.9.1.dev0.tar.gz
Processing ./omero_marshal-0.9.1.dev0.tar.gz
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Building wheels for collected packages: omero_marshal
  Building wheel for omero_marshal (pyproject.toml): started
  Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
  Created wheel for omero_marshal: filename=omero_marshal-0.9.1.dev0-py3-none-any.whl size=88126 sha256=99fc971829ee6f94279e0666747618202d2a07ef1247681e1069ab247335859c
  Stored in directory: /home/omero/.cache/pip/wheels/8b/40/f1/dbed071eff57c96e0824ead2a420a7a1a080f7fbdfe0431d7f
Successfully built omero_marshal
Installing collected packages: omero_marshal
Successfully installed omero_marshal-0.9.1.dev0
+ for x in *.tar.gz
+ pip install -U omero_py-5.19.7.dev0.tar.gz
Processing ./omero_py-5.19.7.dev0.tar.gz
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (1.26.20)
Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (1.4.4)
Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (1.0.0)
Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (1.26.4)
Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (11.1.0)
Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (6.0.2)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (3.6.5)
Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (2.32.3)
Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.7.dev0) (3.1.1)
Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.7.dev0) (3.4.1)
Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.7.dev0) (3.10)
Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.7.dev0) (2025.1.31)
Building wheels for collected packages: omero-py
  Building wheel for omero-py (pyproject.toml): started
  Building wheel for omero-py (pyproject.toml): finished with status 'done'
  Created wheel for omero-py: filename=omero_py-5.19.7.dev0-py3-none-any.whl size=2783224 sha256=be7316a77b51b565b0c1bdca95dea32a1afac073342e7fce0f0b21f2de7aab93
  Stored in directory: /home/omero/.cache/pip/wheels/f7/4b/64/80f70975ab0fd7430ae6a8e09a093688abe603abcb5090fc1b
Successfully built omero-py
Installing collected packages: omero-py
  Attempting uninstall: omero-py
    Found existing installation: omero-py 5.19.6
    Uninstalling omero-py-5.19.6:
      Successfully uninstalled omero-py-5.19.6
Successfully installed omero-py-5.19.7.dev0
+ for x in *.tar.gz
+ pip install -U omero_scripts-5.9.1.dev0.tar.gz
Processing ./omero_scripts-5.9.1.dev0.tar.gz
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Building wheels for collected packages: omero-scripts
  Building wheel for omero-scripts (pyproject.toml): started
  Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
  Created wheel for omero-scripts: filename=omero_scripts-5.9.1.dev0-py3-none-any.whl size=136849 sha256=e53d80592dfbe84a059a89dda26f3517f3046606d853b3ebd8e4d4913e31f433
  Stored in directory: /home/omero/.cache/pip/wheels/4d/ea/13/654c1b7c00351342c84d3e545702a0063ab8e12d260d83323c
Successfully built omero-scripts
Installing collected packages: omero-scripts
Successfully installed omero-scripts-5.9.1.dev0
+ for x in *.tar.gz
+ pip install -U omero_web-5.29.1.dev0.tar.gz
Processing ./omero_web-5.29.1.dev0.tar.gz
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.29.1.dev0) (5.19.7.dev0)
Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.29.1.dev0)
  Using cached concurrent_log_handler-0.9.25-py3-none-any.whl.metadata (17 kB)
Collecting Django<4.3,>=4.2.3 (from omero-web==5.29.1.dev0)
  Using cached Django-4.2.20-py3-none-any.whl.metadata (4.1 kB)
Collecting django-pipeline (from omero-web==5.29.1.dev0)
  Using cached django_pipeline-4.0.0-py3-none-any.whl.metadata (5.8 kB)
Collecting django-cors-headers==3.7.0 (from omero-web==5.29.1.dev0)
  Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
Collecting django-csp (from omero-web==5.29.1.dev0)
  Using cached django_csp-3.8-py3-none-any.whl.metadata (2.7 kB)
Collecting whitenoise>=5.3.0 (from omero-web==5.29.1.dev0)
  Using cached whitenoise-6.9.0-py3-none-any.whl.metadata (3.6 kB)
Collecting gunicorn>=19.3 (from omero-web==5.29.1.dev0)
  Using cached gunicorn-23.0.0-py3-none-any.whl.metadata (4.4 kB)
Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.29.1.dev0) (0.9.1.dev0)
Requirement already satisfied: Pillow in ./.venv3/lib/python3.9/site-packages (from omero-web==5.29.1.dev0) (11.1.0)
Requirement already satisfied: pytz in ./.venv3/lib/python3.9/site-packages (from omero-web==5.29.1.dev0) (2025.1)
Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-web==5.29.1.dev0) (3.1.1)
Requirement already satisfied: packaging in ./.venv3/lib/python3.9/site-packages (from omero-web==5.29.1.dev0) (24.2)
Collecting importlib-resources (from omero-web==5.29.1.dev0)
  Using cached importlib_resources-6.5.2-py3-none-any.whl.metadata (3.9 kB)
Collecting asgiref<4,>=3.6.0 (from Django<4.3,>=4.2.3->omero-web==5.29.1.dev0)
  Using cached asgiref-3.8.1-py3-none-any.whl.metadata (9.3 kB)
Collecting sqlparse>=0.3.1 (from Django<4.3,>=4.2.3->omero-web==5.29.1.dev0)
  Using cached sqlparse-0.5.3-py3-none-any.whl.metadata (3.9 kB)
Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.29.1.dev0) (1.26.20)
Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.29.1.dev0) (1.4.4)
Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.29.1.dev0) (1.0.0)
Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.29.1.dev0) (1.26.4)
Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.29.1.dev0) (6.0.2)
Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.29.1.dev0) (3.6.5)
Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.29.1.dev0) (2.32.3)
Requirement already satisfied: setuptools in ./.venv3/lib/python3.9/site-packages (from django-pipeline->omero-web==5.29.1.dev0) (53.0.0)
Collecting wheel (from django-pipeline->omero-web==5.29.1.dev0)
  Using cached wheel-0.45.1-py3-none-any.whl.metadata (2.3 kB)
Requirement already satisfied: zipp>=3.1.0 in ./.venv3/lib/python3.9/site-packages (from importlib-resources->omero-web==5.29.1.dev0) (3.21.0)
Collecting typing-extensions>=4 (from asgiref<4,>=3.6.0->Django<4.3,>=4.2.3->omero-web==5.29.1.dev0)
  Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.1.dev0) (3.4.1)
Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.1.dev0) (3.10)
Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.1.dev0) (2025.1.31)
Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
Using cached concurrent_log_handler-0.9.25-py3-none-any.whl (25 kB)
Using cached Django-4.2.20-py3-none-any.whl (8.0 MB)
Using cached gunicorn-23.0.0-py3-none-any.whl (85 kB)
Using cached whitenoise-6.9.0-py3-none-any.whl (20 kB)
Using cached django_csp-3.8-py3-none-any.whl (17 kB)
Using cached django_pipeline-4.0.0-py3-none-any.whl (75 kB)
Using cached importlib_resources-6.5.2-py3-none-any.whl (37 kB)
Using cached asgiref-3.8.1-py3-none-any.whl (23 kB)
Using cached sqlparse-0.5.3-py3-none-any.whl (44 kB)
Using cached wheel-0.45.1-py3-none-any.whl (72 kB)
Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
Building wheels for collected packages: omero-web
  Building wheel for omero-web (pyproject.toml): started
  Building wheel for omero-web (pyproject.toml): finished with status 'done'
  Created wheel for omero-web: filename=omero_web-5.29.1.dev0-py3-none-any.whl size=2817949 sha256=10917b9fed28583e90f4d45b175435efb46eed97f73dabcea2b449d8bbddf022
  Stored in directory: /home/omero/.cache/pip/wheels/20/6a/be/a0eb92c362960a201e1b2f293382a92507134b48bed64ccadd
Successfully built omero-web
Installing collected packages: whitenoise, wheel, typing-extensions, sqlparse, importlib-resources, gunicorn, concurrent-log-handler, django-pipeline, asgiref, Django, django-csp, django-cors-headers, omero-web
Successfully installed Django-4.2.20 asgiref-3.8.1 concurrent-log-handler-0.9.25 django-cors-headers-3.7.0 django-csp-3.8 django-pipeline-4.0.0 gunicorn-23.0.0 importlib-resources-6.5.2 omero-web-5.29.1.dev0 sqlparse-0.5.3 typing-extensions-4.12.2 wheel-0.45.1 whitenoise-6.9.0
+ wget https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
--2025-03-23 00:54:44--  https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.111.133, 185.199.109.133, 185.199.108.133, ...
Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.111.133|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: 115659 (113K) [text/plain]
Saving to: ‘Figure_To_Pdf.py’

     0K .......... .......... .......... .......... .......... 44% 3.48M 0s
    50K .......... .......... .......... .......... .......... 88% 5.10M 0s
   100K .......... ..                                         100%  169M=0.02s

2025-03-23 00:54:45 (4.66 MB/s) - ‘Figure_To_Pdf.py’ saved [115659/115659]

+ chmod 755 Figure_To_Pdf.py
+ mv Figure_To_Pdf.py /home/omero/workspace/OMERO-server/OMERO.server/lib/scripts/omero/figure_scripts
+ omero config set omero.db.name OMERO-server
+ omero config set omero.db.host pg
+ omero config set omero.db.user postgres
+ omero config set omero.data.dir /home/omero/omero-server-data
+ omero config set omero.fs.repo.path %user%_%userId%/%thread%//%year%-%month%/%day%/%time%
+ omero config set omero.db.poolsize 25
+ omero config set omero.security.trustStore /etc/pki/ca-trust/extracted/java/cacerts
+ omero config set omero.security.trustStorePassword changeit
+ omero config set omero.mail.config true
+ omero config set omero.mail.from qa@openmicroscopy.org.uk
+ omero config set omero.mail.host smtp.dundee.ac.uk
+ omero config set omero.server.nodedescriptors master:Blitz-0,Indexer-0,Processor-0,Storm,Tables-0
+ omero config set omero.jvmcfg.append '--add-opens java.base/java.lang=ALL-UNNAMED --add-exports java.naming/com.sun.jndi.ldap=ALL-UNNAMED'
+ omero certificates
OpenSSL 3.0.7 1 Nov 2022 (Library: OpenSSL 3.0.7 1 Nov 2022)
certificates created: /home/omero/omero-server-data/certs/server.pem /home/omero/omero-server-data/certs/server.p12
+ '[' false = true ']'
+ echo 'Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade'
Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade
+ omego db -vvv upgrade --serverdir /home/omero/workspace/OMERO-server/OMERO.server --dbname OMERO-server
2025-03-23 00:55:06,363 [    omego.db] DEBUG            dbcommand => upgrade
2025-03-23 00:55:06,363 [    omego.db] DEBUG               dbhost => localhost
2025-03-23 00:55:06,363 [    omego.db] DEBUG               dbname => OMERO-server
2025-03-23 00:55:06,363 [    omego.db] DEBUG               dbpass => omero
2025-03-23 00:55:06,363 [    omego.db] DEBUG               dbuser => omero
2025-03-23 00:55:06,363 [    omego.db] DEBUG             rootpass => omero
2025-03-23 00:55:06,363 [    omego.db] DEBUG            serverdir => /home/omero/workspace/OMERO-server/OMERO.server
2025-03-23 00:55:06,363 [omego.extern] INFO  Executing : omero version
OMERO.py version:
OMERO.server version:
5.6.3-548-19eb338847-ice36
5.19.7.dev0
2025-03-23 00:55:07,825 [omego.extern] INFO  Completed [1.462 s]
2025-03-23 00:55:07,826 [omego.extern] DEBUG Using omero CLI from omero
2025-03-23 00:55:07,826 [    omego.db] INFO  DbAdmin: DbAdmin /home/omero/workspace/OMERO-server/OMERO.server ...
2025-03-23 00:55:07,826 [omego.extern] INFO  Running [current environment]: omero config get --show-password
2025-03-23 00:55:07,826 [omego.extern] INFO  Executing : omero config get --show-password
2025-03-23 00:55:09,174 [omego.extern] INFO  Completed [1.348 s]
2025-03-23 00:55:09,175 [    omego.db] INFO  Failed to lookup parameter omero.db.pass, using omero
2025-03-23 00:55:09,175 [omego.extern] INFO  Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t --version
2025-03-23 00:55:09,511 [omego.extern] INFO  Completed [0.336 s]
2025-03-23 00:55:09,511 [    omego.db] DEBUG stdout: b'psql (PostgreSQL) 16.4\n'
2025-03-23 00:55:09,511 [    omego.db] INFO  psql version: psql (PostgreSQL) 16.4

2025-03-23 00:55:09,511 [omego.extern] INFO  Running [current environment]: omero config get --show-password
2025-03-23 00:55:09,511 [omego.extern] INFO  Executing : omero config get --show-password
2025-03-23 00:55:10,956 [omego.extern] INFO  Completed [1.445 s]
2025-03-23 00:55:10,956 [    omego.db] INFO  Failed to lookup parameter omero.db.pass, using omero
2025-03-23 00:55:10,957 [omego.extern] INFO  Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c \conninfo
2025-03-23 00:55:11,169 [omego.extern] INFO  Completed [0.212 s]
2025-03-23 00:55:11,169 [    omego.db] DEBUG stdout: b'You are connected to database "OMERO-server" as user "postgres" on host "pg" (address "172.18.0.4") at port "5432".\n'
2025-03-23 00:55:11,169 [    omego.db] DEBUG Executing query: SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
2025-03-23 00:55:11,169 [omego.extern] INFO  Running [current environment]: omero config get --show-password
2025-03-23 00:55:11,169 [omego.extern] INFO  Executing : omero config get --show-password
2025-03-23 00:55:12,623 [omego.extern] INFO  Completed [1.454 s]
2025-03-23 00:55:12,624 [    omego.db] INFO  Failed to lookup parameter omero.db.pass, using omero
2025-03-23 00:55:12,624 [omego.extern] INFO  Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
2025-03-23 00:55:13,609 [omego.extern] INFO  Completed [0.984 s]
2025-03-23 00:55:13,609 [    omego.db] DEBUG stdout: b'OMERO5.4|0\n'
2025-03-23 00:55:13,609 [    omego.db] INFO  Current omero db version: ('OMERO5.4', '0')
2025-03-23 00:55:13,611 [    omego.db] INFO  Database is already at OMERO5.4__0
+ export LANG=en_US.UTF-8
+ LANG=en_US.UTF-8
+ export LANGUAGE=en_US:en
+ LANGUAGE=en_US:en
+ export LC_ALL=en_US.UTF-8
+ LC_ALL=en_US.UTF-8
+ BUILD_ID=DONT_KILL_ME
+ omero admin start
WARNING: lock files in /home/omero/omero-server-data
----------------------------------------
/home/omero/omero-server-data/.omero/repository/7097ab62-1c9f-4ba2-a5e5-d5b1f868081e/.lock
----------------------------------------

You may want to stop all server processes and remove
these files manually. Lock files can remain after an
abrupt server outage and are especially frequent on
remotely mounted filesystems like NFS.

No descriptor given. Using etc/grid/default.xml
Creating /home/omero/workspace/OMERO-server/OMERO.server/var/master
Initializing /home/omero/workspace/OMERO-server/OMERO.server/var/log
Creating /home/omero/workspace/OMERO-server/OMERO.server/var/registry
Waiting on startup. Use CTRL-C to exit
+ omero admin waitup
Waiting on startup. Use CTRL-C to exit
+ omero admin diagnostics

================================================================================
OMERO Diagnostics (admin)
================================================================================
        
Commands:   java -version                  11.0.24   (/usr/bin/java)
Commands:   python -V                      3.9.18    (/home/omero/workspace/OMERO-server/.venv3/bin/python)
Commands:   icegridnode --version          3.6.5     (/opt/ice-3.6.5/bin/icegridnode)
Commands:   icegridadmin --version         3.6.5     (/opt/ice-3.6.5/bin/icegridadmin)
Commands:   psql --version                 16.4      (/usr/bin/psql)
Commands:   openssl version                3.0.71    (/usr/bin/openssl)

Component:  OMERO.py                       5.19.7.dev0
Component:  OMERO.server                   5.6.3-548-19eb338847-ice36

Server:     icegridnode                    running
Server:     Blitz-0                        active (pid = 2625, enabled)
Server:     Indexer-0                      activating (enabled)
Server:     OMERO.Glacier2                 active (pid = 2651, enabled)
Server:     OMERO.IceStorm                 active (pid = 2678, enabled)
Server:     Processor-0                    activating (enabled)
Server:     Tables-0                       activating (enabled)

Log dir:    /home/omero/workspace/OMERO-server/OMERO.server/var/log exists
Log files:  Blitz-0.log                    16.6 KB       errors=0    warnings=1   
Log files:  DropBox.log                    n/a
Log files:  FileServer.log                 n/a
Log files:  Indexer-0.log                  2.1 KB       
Log files:  MonitorServer.log              n/a
Log files:  Processor-0.log                592 B        
Log files:  Tables-0.log                   841 B        
Log files:  TestDropBox.log                n/a
Log files:  master.err                     25.8 KB      
Log files:  master.out                     30.5 KB      
Log files:  Total size                     0.08 MB


Environment:OMERO_HOME=(unset)             
Environment:OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server 
Environment:OMERO_NODE=(unset)             
Environment:OMERO_MASTER=(unset)           
Environment:OMERO_USERDIR=(unset)          
Environment:OMERO_TMPDIR=(unset)           
Environment:PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 
Environment:PYTHONPATH=(unset)             
Environment:ICE_HOME=/opt/ice-3.6.5        
Environment:LD_LIBRARY_PATH=(unset)        
Environment:DYLD_LIBRARY_PATH=(unset)      

OMERO SSL port:4064                           
OMERO TCP port:4063                           
OMERO data dir:'/home/omero/omero-server-data' Exists? True	Is writable? True
OMERO temp dir:'/home/omero/omero/tmp'        Exists? True	Is writable? True   (Size: 0)

JVM settings: Blitz-${index}                -Xmx7200m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions
JVM settings: Indexer-${index}              -Xmx4800m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions
JVM settings: PixelData-${index}            -Xmx7200m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions
JVM settings: Repository-${index}           -Xmx4800m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions

Jar:        lib/server/formats-api.jar     Bio-Formats API	8.2.0-SNAPSHOT	23 March 2025	ac4a4024ba712b24b4c7fd0bd4eb47bdddc20367
Jar:        lib/server/formats-bsd.jar     BSD Bio-Formats readers and writers	8.2.0-SNAPSHOT	23 March 2025	ac4a4024ba712b24b4c7fd0bd4eb47bdddc20367
Jar:        lib/server/formats-gpl.jar     Bio-Formats library	8.2.0-SNAPSHOT	23 March 2025	ac4a4024ba712b24b4c7fd0bd4eb47bdddc20367
Jar:        lib/server/ome-codecs.jar      OME Codecs	1.1.1-SNAPSHOT	23 March 2025	2fa6d8c668d3e87633f799a8157aa39e4e771263
Jar:        lib/server/ome-common.jar      OME Common Java	6.0.26-SNAPSHOT	23 March 2025	2fa6d8c668d3e87633f799a8157aa39e4e771263
Jar:        lib/server/ome-jai.jar         OME JAI	0.1.5-SNAPSHOT	23 March 2025	2fa6d8c668d3e87633f799a8157aa39e4e771263
Jar:        lib/server/ome-mdbtools.jar    MDB Tools (Java port)	5.3.4-SNAPSHOT	23 March 2025	2fa6d8c668d3e87633f799a8157aa39e4e771263
Jar:        lib/server/ome-poi.jar         OME POI	5.3.10-SNAPSHOT	23 March 2025	2fa6d8c668d3e87633f799a8157aa39e4e771263
Jar:        lib/server/ome-xml.jar         OME XML library	6.5.0-SNAPSHOT	23 March 2025	2fa6d8c668d3e87633f799a8157aa39e4e771263
Jar:        lib/server/omero-blitz.jar     jar	5.8.2-SNAPSHOT		
Jar:        lib/server/omero-common.jar    jar	5.7.2-SNAPSHOT		
Jar:        lib/server/omero-gateway.jar   jar	5.10.2-SNAPSHOT		
Jar:        lib/server/omero-model.jar     jar	5.7.2-SNAPSHOT		
Jar:        lib/server/omero-renderer.jar  jar	5.6.2-SNAPSHOT		
Jar:        lib/server/omero-romio.jar     jar	5.8.2-SNAPSHOT		
Jar:        lib/server/omero-server.jar    jar	5.7.2-SNAPSHOT		
+ deactivate
+ '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
+ PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
+ export PATH
+ unset _OLD_VIRTUAL_PATH
+ '[' -n '' ']'
+ '[' -n /bin/bash -o -n '' ']'
+ hash -r
+ '[' -n '' ']'
+ unset VIRTUAL_ENV
+ '[' '!' '' = nondestructive ']'
+ unset -f deactivate
Finished: SUCCESS