08:23:03 Started by upstream project "Trigger" build number 95 08:23:03 originally caused by: 08:23:03 Started by user devspace 08:23:03 Running as SYSTEM 08:23:03 Building remotely on omero (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-server 08:23:03 [OMERO-server] $ /bin/bash -xe /tmp/jenkins12839139139168511995.sh 08:23:03 + source /home/settings.env 08:23:03 ++ OMERO_DB_HOST=pg 08:23:03 ++ OMERO_DB_USER=postgres 08:23:03 ++ OMERO_DB_PASS= 08:23:03 ++ OMERO_ROOT_PASS=omero 08:23:03 ++ OMERO_DATA_DIR=/OMERO 08:23:03 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR 08:23:03 + OMERO_DB_NAME=OMERO-server 08:23:03 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server 08:23:03 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server 08:23:03 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server 08:23:03 + OMERO_DATA_DIR=/home/omero/omero-server-data 08:23:03 + '[' -e /home/omero/workspace/OMERO-server/OMERO.server ']' 08:23:03 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate 08:23:03 ++ deactivate nondestructive 08:23:03 ++ '[' -n '' ']' 08:23:03 ++ '[' -n '' ']' 08:23:03 ++ '[' -n /bin/bash -o -n '' ']' 08:23:03 ++ hash -r 08:23:03 ++ '[' -n '' ']' 08:23:03 ++ unset VIRTUAL_ENV 08:23:03 ++ '[' '!' nondestructive = nondestructive ']' 08:23:03 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3 08:23:03 ++ export VIRTUAL_ENV 08:23:03 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 08:23:03 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 08:23:03 ++ export PATH 08:23:03 ++ '[' -n '' ']' 08:23:03 ++ '[' -z '' ']' 08:23:03 ++ _OLD_VIRTUAL_PS1= 08:23:03 ++ PS1='(.venv3) ' 08:23:03 ++ export PS1 08:23:03 ++ '[' -n /bin/bash -o -n '' ']' 08:23:03 ++ hash -r 08:23:03 + omero admin stop 08:23:11 Waiting on shutdown. Use CTRL-C to exit 08:23:11 .+ sleep 5 08:23:26 + deactivate 08:23:26 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']' 08:23:26 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 08:23:26 + export PATH 08:23:26 + unset _OLD_VIRTUAL_PATH 08:23:26 + '[' -n '' ']' 08:23:26 + '[' -n /bin/bash -o -n '' ']' 08:23:26 + hash -r 08:23:26 + '[' -n '' ']' 08:23:26 + unset VIRTUAL_ENV 08:23:26 + '[' '!' '' = nondestructive ']' 08:23:26 + unset -f deactivate 08:23:26 + rm -rf /home/omero/workspace/OMERO-server/.venv3 08:23:27 + python3 -m venv /home/omero/workspace/OMERO-server/.venv3 08:23:31 + '[' false = true ']' 08:23:31 + echo 'Skipping PURGE_DATA:CleanDbAndRepo' 08:23:31 Skipping PURGE_DATA:CleanDbAndRepo 08:23:31 + rm -rf /home/omero/workspace/OMERO-server/omero-blitz-5.7.4-SNAPSHOT-python.zip /home/omero/workspace/OMERO-server/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_marshal-0.9.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_py-5.19.3.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_scripts-5.8.3.dev0.tar.gz /home/omero/workspace/OMERO-server/OMERO.server /home/omero/workspace/OMERO-server/omero_web-5.26.1.dev0.tar.gz /home/omero/workspace/OMERO-server/version.properties 08:23:38 Copied 1 artifact from "OMERO-build" build number 83 08:23:38 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 82 08:23:38 Copied 2 artifacts from "OMERO-build-build" build number 83 08:23:38 [OMERO-server] $ /bin/bash -xe /tmp/jenkins8787402194563964069.sh 08:23:38 + source /home/settings.env 08:23:38 ++ OMERO_DB_HOST=pg 08:23:38 ++ OMERO_DB_USER=postgres 08:23:38 ++ OMERO_DB_PASS= 08:23:38 ++ OMERO_ROOT_PASS=omero 08:23:38 ++ OMERO_DATA_DIR=/OMERO 08:23:38 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR 08:23:38 + OMERO_DB_NAME=OMERO-server 08:23:38 + OMERO_DATA_DIR=/home/omero/omero-server-data 08:23:38 + mkdir -p /home/omero/omero-server-data 08:23:38 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server 08:23:38 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server 08:23:38 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server 08:23:38 + export ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip 08:23:38 + ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip 08:23:38 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties 08:23:38 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties 08:23:38 ++ ls OMERO.server-5.6.3-469-db8274c741-ice36.zip 08:23:38 + ZIP=OMERO.server-5.6.3-469-db8274c741-ice36.zip 08:23:38 + '[' '!' -z '' ']' 08:23:38 + DIST=OMERO.server-5.6.3-469-db8274c741-ice36 08:23:38 + unzip OMERO.server-5.6.3-469-db8274c741-ice36.zip 08:23:38 Archive: OMERO.server-5.6.3-469-db8274c741-ice36.zip 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/blitz/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/grid/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/profiles/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/templates/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/templates/error/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/templates/grid/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/janelia/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ncsa_paledit/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/wcif/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/analysis_scripts/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/annotation_scripts/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/export_scripts/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/figure_scripts/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/import_scripts/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/util_scripts/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/share/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/misc/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__1/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__10/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__11/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__2/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__3/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__4/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__5/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__6/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__7/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__8/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__9/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3__4/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3__5/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3__6/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3__7/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO4.1__0/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO4.2__0/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO4.2__0/t/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO4.3__0/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO4.4__0/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO4__0/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.0__0/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.1__1/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.2__0/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.3__0/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4DEV__1/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4DEV__2/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4DEV__3/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4__0/ 08:23:38 creating: OMERO.server-5.6.3-469-db8274c741-ice36/var/ 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/LICENSE.txt 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/backup.cfg 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/blitz/mail-senders.example 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/blitz/mail-server.example 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/build.properties 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/env.bat 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/env.sh 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/hibernate.properties 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/ice.config 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/logback-cli.xml 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/logback-indexing-cli.xml 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/logback-indexing.xml 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/logback.xml 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/mime.types 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/node1.cfg 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/node2.cfg 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/omero.properties 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/profiles/psql 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/rollover.cfg 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/templates/Windows.cfg 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/templates/error/maintainance.html 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/templates/grid/README 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/templates/grid/default.xml 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/templates/grid/templates.xml 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/templates/grid/windefault.xml 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/templates/ice.config 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/templates/internal.cfg 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/templates/master.cfg 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/templates/robot.template 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/etc/testdropbox.config 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/history.rst 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/OMEZarrReader.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/activation.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/aggdesigner-algorithm.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/aircompressor.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/annotations.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/antlr.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/aopalliance.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/avatica-core.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/avatica-metrics.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/aws-java-sdk-core.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/aws-java-sdk-kms.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/aws-java-sdk-s3.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/base.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-all.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-anim.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-awt-util.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-bridge.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-codec.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-constants.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-css.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-dom.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-ext.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-extension.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-gui-util.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-gvt.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-i18n.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-parser.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-rasterizer-ext.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-rasterizer.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-script.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-slideshow.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-squiggle-ext.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-squiggle.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-svg-dom.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-svgbrowser.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-svggen.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-svgpp.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-svgrasterizer.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-swing.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-transcoder.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-ttf2svg.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-util.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/batik-xml.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/btm.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/bufr.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/byte-buddy-agent.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/byte-buddy.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/c3p0.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/calcite-core.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/calcite-linq4j.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/cdm-core.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/checker-qual.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/commons-beanutils.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/commons-codec.jar 08:23:38 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/commons-collections.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/commons-collections4.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/commons-compiler.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/commons-dbcp2.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/commons-io.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/commons-lang.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/commons-lang3.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/commons-logging.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/commons-pool2.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/dom4j.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/ehcache.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/error_prone_annotations.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/esri-geometry-api.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/failureaccess.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/filters.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/fontbox.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/formats-api.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/formats-bsd.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/formats-gpl.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/glacier2.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/google-http-client-xml.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/google-http-client.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/guava.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/hamcrest-core.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/hazelcast-all.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/hibernate-commons-annotations.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/hibernate-core.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/hibernate-jpa-2.0-api.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/hibernate-search-analyzers.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/hibernate-search.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/httpclient.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/httpcore.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/httpmime.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/httpservices.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/ice.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/icegrid.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/icestorm.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/ini4j.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/j2objc-annotations.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jackson-annotations.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jackson-core.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jackson-databind.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jackson-dataformat-cbor.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jackson-dataformat-yaml.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jamon.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/janino.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/java-getopt.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/java-image-scaling.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/javassist.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/javax.activation.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/javax.mail.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jblosc.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jcip-annotations.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jcl-over-slf4j.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jcommander.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jgoodies-common.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jgoodies-forms.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jhdf5.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jmespath-java.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jna.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/joda-time.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/json-path.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/json.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jta.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jul-to-slf4j.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/junit.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jxrlib-all.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jython.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/jzarr.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/kryo.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/listenablefuture.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/logback-classic.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/logback-core.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/lucene-analyzers.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/lucene-core.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/lucene-highlighter.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/lucene-memory.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/lucene-misc.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/lucene-smartcn.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/lucene-spatial.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/lucene-spellchecker.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/lucene-stempel.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/memory.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/metadata-extractor.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/metakit.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/metrics-core.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/metrics-graphite.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/metrics-jvm.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/metrics-logback.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/minio.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/minlog.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/mockito-core.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/mockito-inline.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/native-lib-loader.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/objenesis.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/okhttp.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/okio.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/ome-codecs.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/ome-common.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/ome-jai.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/ome-mdbtools.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/ome-poi.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/ome-xml.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/omero-blitz.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/omero-common.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/omero-gateway.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/omero-model.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/omero-renderer.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/omero-romio.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/omero-server.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/pdfbox.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/perf4j.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/postgresql.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/protobuf-java.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/quartz.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/re2j.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/reflectasm.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/rhino.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/serializer.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/sketches-core.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/slf4j-api.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/snakeyaml.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/solr-analysis-extras.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/solr-commons-csv.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/solr-core.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/solr-solrj.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/specification.jar 08:23:39 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/spring-aop.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/spring-beans.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/spring-context-support.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/spring-context.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/spring-core.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/spring-expression.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/spring-jdbc.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/spring-jms.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/spring-ldap-core.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/spring-messaging.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/spring-orm.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/spring-security-core.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/spring-security-ldap.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/spring-tx.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/sqlite-jdbc.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/subethasmtp.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/testng.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/turbojpeg.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/udunits.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/xalan.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/xercesImpl.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/xml-apis-ext.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/xml-apis.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/xmlgraphics-commons.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/xmpcore.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/client/xpp3.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/README.rst 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/3-3-2_rgb.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/fire.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/glasbey.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/glasbey_inverted.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/glow.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/grays.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ice.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/janelia/pup_br.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/janelia/pup_nr.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ncsa_paledit/16_colors.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ncsa_paledit/5_ramps.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ncsa_paledit/6_shades.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ncsa_paledit/blue_orange_icb.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ncsa_paledit/brgbcmyw.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ncsa_paledit/cool.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ncsa_paledit/edges.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ncsa_paledit/gem.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ncsa_paledit/phase.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ncsa_paledit/royal.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ncsa_paledit/sepia.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ncsa_paledit/smart.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ncsa_paledit/thal.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ncsa_paledit/thallium.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/ncsa_paledit/unionjack.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/physics.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/red-green.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/spectrum.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/thermal.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/wcif/cyan_hot.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/wcif/green_fire_blue.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/wcif/hilo.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/wcif/ica.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/wcif/ica2.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/wcif/ica3.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/wcif/magenta_hot.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/wcif/orange_hot.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/wcif/rainbow_rgb.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/wcif/red_hot.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/luts/wcif/yellow_hot.lut 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/analysis_scripts/Kymograph.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/analysis_scripts/Kymograph_Analysis.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/analysis_scripts/Plot_Profile.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/analysis_scripts/__init__.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/annotation_scripts/KeyVal_from_csv.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/annotation_scripts/KeyVal_to_csv.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/annotation_scripts/Remove_KeyVal.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/annotation_scripts/__init__.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/export_scripts/Batch_Image_Export.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/export_scripts/Batch_ROI_Export.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/export_scripts/Make_Movie.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/export_scripts/__init__.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/figure_scripts/Movie_Figure.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/figure_scripts/Movie_ROI_Figure.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/figure_scripts/ROI_Split_Figure.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/figure_scripts/Split_View_Figure.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/figure_scripts/Thumbnail_Figure.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/figure_scripts/__init__.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/import_scripts/Populate_Metadata.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/import_scripts/Populate_ROI.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/import_scripts/__init__.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/util_scripts/Channel_Offsets.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/util_scripts/Combine_Images.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/util_scripts/Dataset_To_Plate.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/util_scripts/Images_From_ROIs.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/util_scripts/Move_Annotations.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/scripts/omero/util_scripts/__init__.py 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/OMEZarrReader.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/activation.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/aggdesigner-algorithm.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/aircompressor.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/annotations.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/antlr.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/aopalliance.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/avatica-core.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/avatica-metrics.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/aws-java-sdk-core.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/aws-java-sdk-kms.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/aws-java-sdk-s3.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/base.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-all.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-anim.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-awt-util.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-bridge.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-codec.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-constants.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-css.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-dom.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-ext.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-extension.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-gui-util.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-gvt.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-i18n.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-parser.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-rasterizer-ext.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-rasterizer.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-script.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-slideshow.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-squiggle-ext.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-squiggle.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-svg-dom.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-svgbrowser.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-svggen.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-svgpp.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-svgrasterizer.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-swing.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-transcoder.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-ttf2svg.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-util.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/batik-xml.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/btm.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/bufr.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/byte-buddy-agent.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/byte-buddy.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/c3p0.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/calcite-core.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/calcite-linq4j.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/cdm-core.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/checker-qual.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/commons-beanutils.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/commons-codec.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/commons-collections.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/commons-collections4.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/commons-compiler.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/commons-dbcp2.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/commons-io.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/commons-lang.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/commons-lang3.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/commons-logging.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/commons-pool2.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/dom4j.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/ehcache.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/error_prone_annotations.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/esri-geometry-api.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/failureaccess.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/filters.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/fontbox.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/formats-api.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/formats-bsd.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/formats-gpl.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/glacier2.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/google-http-client-xml.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/google-http-client.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/guava.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/hamcrest-core.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/hazelcast-all.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/hibernate-commons-annotations.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/hibernate-core.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/hibernate-jpa-2.0-api.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/hibernate-search-analyzers.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/hibernate-search.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/httpclient.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/httpcore.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/httpmime.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/httpservices.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/ice.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/icegrid.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/icestorm.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/ini4j.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/j2objc-annotations.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jackson-annotations.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jackson-core.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jackson-databind.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jackson-dataformat-cbor.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jackson-dataformat-yaml.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jamon.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/janino.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/java-getopt.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/java-image-scaling.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/javassist.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/javax.activation.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/javax.mail.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jblosc.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jcip-annotations.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jcl-over-slf4j.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jcommander.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jgoodies-common.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jgoodies-forms.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jhdf5.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jmespath-java.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jna.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/joda-time.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/json-path.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/json.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jta.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jul-to-slf4j.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/junit.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jxrlib-all.jar 08:23:40 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jython.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/jzarr.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/kryo.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/listenablefuture.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/logback-classic.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/logback-core.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/lucene-analyzers.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/lucene-core.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/lucene-highlighter.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/lucene-memory.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/lucene-misc.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/lucene-smartcn.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/lucene-spatial.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/lucene-spellchecker.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/lucene-stempel.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/memory.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/metadata-extractor.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/metakit.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/metrics-core.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/metrics-graphite.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/metrics-jvm.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/metrics-logback.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/minio.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/minlog.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/mockito-core.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/mockito-inline.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/native-lib-loader.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/objenesis.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/okhttp.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/okio.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/ome-codecs.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/ome-common.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/ome-jai.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/ome-mdbtools.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/ome-poi.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/ome-xml.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/omero-blitz.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/omero-common.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/omero-gateway.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/omero-model.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/omero-renderer.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/omero-romio.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/omero-server.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/pdfbox.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/perf4j.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/postgresql.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/protobuf-java.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/quartz.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/re2j.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/reflectasm.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/rhino.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/serializer.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/sketches-core.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/slf4j-api.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/snakeyaml.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/solr-analysis-extras.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/solr-commons-csv.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/solr-core.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/solr-solrj.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/specification.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/spring-aop.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/spring-beans.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/spring-context-support.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/spring-context.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/spring-core.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/spring-expression.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/spring-jdbc.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/spring-jms.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/spring-ldap-core.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/spring-messaging.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/spring-orm.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/spring-security-core.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/spring-security-ldap.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/spring-tx.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/sqlite-jdbc.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/subethasmtp.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/testng.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/turbojpeg.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/udunits.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/xalan.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/xercesImpl.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/xml-apis-ext.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/xml-apis.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/xmlgraphics-commons.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/xmpcore.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/lib/server/xpp3.jar 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/README 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/agpl.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/antlr.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/apache-v1.1.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/apache-v2.0.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/asm.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/bouncy_castle_license.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/bsd.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/cddl-v1.0.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/cpl-v10.html 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/crystalclear.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/django.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/dom4j.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/epl-v1.0.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/fbsd.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/freemarker.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/gpl-v2.0.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/gpl.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/gtest.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/iconsweets_license.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/jamon.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/jmock.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/jquery.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/jtidy.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/lgpl-3.0.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/lgpl-v2.0.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/lgpl-v2.1.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/lgpl-v3.0.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/lgpl.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/matplotlib.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/mit.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/mpl-v1_0.htm 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/npl-1_1.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/path.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/pil.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/postgresql.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/psf-v2.0.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/psf-v2.5.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/scons.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/slf4j.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/tablelayout.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/which.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/zlib-libpng.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/share/licenses/zpl-v2.1.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/README.txt 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/misc/Makefile 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/misc/current.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/misc/enums.py 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__1/OMERO3__7.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__10/OMERO3A__9.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__11/OMERO3A__10.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__11/OMERO3A__5.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__2/OMERO3A__1.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__3/OMERO3A__2.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__3/OMERO3__5.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__4/OMERO3A__3.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__4/OMERO3__5.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__5/OMERO3A__4.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__6/OMERO3A__5.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__7/OMERO3A__6.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__8/OMERO3A__6.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3A__9/OMERO3A__8.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3__4/OMERO3__1.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3__5/OMERO3__4.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3__6/OMERO3__5.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO3__7/OMERO3__6.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO4.1__0/OMERO4__0.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO4.2__0/OMERO4.1__0.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO4.3__0/OMERO4.2__0.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO4.4__0/OMERO4.1__0.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO4.4__0/OMERO4.3__0.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO4__0/OMERO3A__11.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.0__0/OMERO4.4__0.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.1__1/OMERO5.0__0.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.1__1/OMERO5.1__0.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.2__0/OMERO5.1__1.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.3__0/OMERO5.2__0.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.3__0/delete-ns-orphans.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4__0/OMERO5.3__0.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4__0/OMERO5.3__1.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4__0/psql-footer.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4__0/psql-header.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4__0/schema.sql 08:23:41 inflating: OMERO.server-5.6.3-469-db8274c741-ice36/sql/psql/OMERO5.4__0/views.sql 08:23:41 + rm -f OMERO.server-5.6.3-469-db8274c741-ice36.zip 08:23:41 + mv /home/omero/workspace/OMERO-server/OMERO.server-5.6.3-469-db8274c741-ice36 /home/omero/workspace/OMERO-server/OMERO.server 08:23:41 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate 08:23:41 ++ deactivate nondestructive 08:23:41 ++ '[' -n '' ']' 08:23:41 ++ '[' -n '' ']' 08:23:41 ++ '[' -n /bin/bash -o -n '' ']' 08:23:41 ++ hash -r 08:23:41 ++ '[' -n '' ']' 08:23:41 ++ unset VIRTUAL_ENV 08:23:41 ++ '[' '!' nondestructive = nondestructive ']' 08:23:41 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3 08:23:41 ++ export VIRTUAL_ENV 08:23:41 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 08:23:41 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 08:23:41 ++ export PATH 08:23:41 ++ '[' -n '' ']' 08:23:41 ++ '[' -z '' ']' 08:23:41 ++ _OLD_VIRTUAL_PS1= 08:23:41 ++ PS1='(.venv3) ' 08:23:41 ++ export PS1 08:23:41 ++ '[' -n /bin/bash -o -n '' ']' 08:23:41 ++ hash -r 08:23:41 + pip install https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl 08:23:42 Collecting zeroc-ice==3.6.5 08:23:42 Downloading https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl (31.3 MB) 08:23:44 Installing collected packages: zeroc-ice 08:23:45 Successfully installed zeroc-ice-3.6.5 08:23:45 + pip install -U pip future 08:23:45 Requirement already satisfied: pip in ./.venv3/lib/python3.9/site-packages (21.2.3) 08:23:46 Collecting pip 08:23:46 Using cached pip-24.0-py3-none-any.whl (2.1 MB) 08:23:46 Collecting future 08:23:46 Using cached future-1.0.0-py3-none-any.whl (491 kB) 08:23:46 Installing collected packages: pip, future 08:23:46 Attempting uninstall: pip 08:23:46 Found existing installation: pip 21.2.3 08:23:46 Uninstalling pip-21.2.3: 08:23:46 Successfully uninstalled pip-21.2.3 08:23:48 Successfully installed future-1.0.0 pip-24.0 08:23:48 + pip install markdown 08:23:49 Collecting markdown 08:23:49 Using cached Markdown-3.6-py3-none-any.whl.metadata (7.0 kB) 08:23:49 Collecting importlib-metadata>=4.4 (from markdown) 08:23:49 Using cached importlib_metadata-7.1.0-py3-none-any.whl.metadata (4.7 kB) 08:23:49 Collecting zipp>=0.5 (from importlib-metadata>=4.4->markdown) 08:23:49 Using cached zipp-3.19.2-py3-none-any.whl.metadata (3.6 kB) 08:23:49 Using cached Markdown-3.6-py3-none-any.whl (105 kB) 08:23:50 Using cached importlib_metadata-7.1.0-py3-none-any.whl (24 kB) 08:23:50 Using cached zipp-3.19.2-py3-none-any.whl (9.0 kB) 08:23:50 Installing collected packages: zipp, importlib-metadata, markdown 08:23:50 Successfully installed importlib-metadata-7.1.0 markdown-3.6 zipp-3.19.2 08:23:50 + pip install reportlab 08:23:51 Collecting reportlab 08:23:51 Using cached reportlab-4.2.0-py3-none-any.whl.metadata (1.4 kB) 08:23:51 Collecting pillow>=9.0.0 (from reportlab) 08:23:51 Using cached pillow-10.3.0-cp39-cp39-manylinux_2_28_x86_64.whl.metadata (9.2 kB) 08:23:51 Collecting chardet (from reportlab) 08:23:51 Using cached chardet-5.2.0-py3-none-any.whl.metadata (3.4 kB) 08:23:52 Using cached reportlab-4.2.0-py3-none-any.whl (1.9 MB) 08:23:52 Using cached pillow-10.3.0-cp39-cp39-manylinux_2_28_x86_64.whl (4.5 MB) 08:23:52 Using cached chardet-5.2.0-py3-none-any.whl (199 kB) 08:23:52 Installing collected packages: pillow, chardet, reportlab 08:23:54 Successfully installed chardet-5.2.0 pillow-10.3.0 reportlab-4.2.0 08:23:54 + pip install omego 08:23:55 Collecting omego 08:23:55 Using cached omego-0.7.0-py3-none-any.whl 08:23:55 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omego) (1.0.0) 08:23:55 Collecting yaclifw>=0.1.1 (from omego) 08:23:55 Using cached yaclifw-0.2.0-py3-none-any.whl 08:23:55 Collecting six (from yaclifw>=0.1.1->omego) 08:23:55 Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) 08:23:55 Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) 08:23:55 Installing collected packages: six, yaclifw, omego 08:23:55 Successfully installed omego-0.7.0 six-1.16.0 yaclifw-0.2.0 08:23:55 + pip install tables 08:23:56 Collecting tables 08:23:56 Using cached tables-3.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.3 kB) 08:23:57 Collecting numpy>=1.19.0 (from tables) 08:23:57 Using cached numpy-1.26.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (61 kB) 08:23:57 Collecting numexpr>=2.6.2 (from tables) 08:23:57 Using cached numexpr-2.10.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (7.9 kB) 08:23:57 Collecting packaging (from tables) 08:23:57 Using cached packaging-24.0-py3-none-any.whl.metadata (3.2 kB) 08:23:57 Collecting py-cpuinfo (from tables) 08:23:57 Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes) 08:23:57 Collecting blosc2>=2.3.0 (from tables) 08:23:57 Using cached blosc2-2.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (9.2 kB) 08:23:57 Collecting ndindex>=1.4 (from blosc2>=2.3.0->tables) 08:23:57 Using cached ndindex-1.8-py3-none-any.whl.metadata (3.4 kB) 08:23:57 Collecting msgpack (from blosc2>=2.3.0->tables) 08:23:58 Using cached msgpack-1.0.8-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (9.1 kB) 08:23:58 Using cached tables-3.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (7.5 MB) 08:23:58 Using cached blosc2-2.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (4.4 MB) 08:23:58 Using cached numexpr-2.10.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (375 kB) 08:23:58 Using cached numpy-1.26.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (18.2 MB) 08:23:58 Using cached packaging-24.0-py3-none-any.whl (53 kB) 08:23:58 Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB) 08:23:58 Using cached ndindex-1.8-py3-none-any.whl (91 kB) 08:23:58 Using cached msgpack-1.0.8-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (385 kB) 08:23:58 Installing collected packages: py-cpuinfo, packaging, numpy, ndindex, msgpack, numexpr, blosc2, tables 08:24:02 Successfully installed blosc2-2.5.1 msgpack-1.0.8 ndindex-1.8 numexpr-2.10.0 numpy-1.26.4 packaging-24.0 py-cpuinfo-9.0.0 tables-3.9.2 08:24:03 + pip install jinja2 08:24:03 Collecting jinja2 08:24:03 Using cached jinja2-3.1.4-py3-none-any.whl.metadata (2.6 kB) 08:24:03 Collecting MarkupSafe>=2.0 (from jinja2) 08:24:03 Using cached MarkupSafe-2.1.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.0 kB) 08:24:03 Using cached jinja2-3.1.4-py3-none-any.whl (133 kB) 08:24:03 Using cached MarkupSafe-2.1.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (25 kB) 08:24:04 Installing collected packages: MarkupSafe, jinja2 08:24:04 Successfully installed MarkupSafe-2.1.5 jinja2-3.1.4 08:24:04 + pip install omero-py 08:24:05 Collecting omero-py 08:24:05 Using cached omero_py-5.19.2-py3-none-any.whl.metadata (6.6 kB) 08:24:05 Collecting urllib3<2 (from omero-py) 08:24:05 Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) 08:24:05 Collecting appdirs (from omero-py) 08:24:05 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB) 08:24:05 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py) (1.0.0) 08:24:05 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py) (1.26.4) 08:24:05 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py) (10.3.0) 08:24:05 Collecting PyYAML (from omero-py) 08:24:05 Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) 08:24:05 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py) (3.6.5) 08:24:05 Collecting requests (from omero-py) 08:24:05 Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) 08:24:05 Collecting portalocker (from omero-py) 08:24:05 Using cached portalocker-2.8.2-py3-none-any.whl.metadata (8.5 kB) 08:24:05 Collecting charset-normalizer<4,>=2 (from requests->omero-py) 08:24:05 Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) 08:24:05 Collecting idna<4,>=2.5 (from requests->omero-py) 08:24:05 Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) 08:24:06 Collecting certifi>=2017.4.17 (from requests->omero-py) 08:24:06 Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB) 08:24:06 Using cached omero_py-5.19.2-py3-none-any.whl (2.8 MB) 08:24:06 Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) 08:24:06 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB) 08:24:06 Using cached portalocker-2.8.2-py3-none-any.whl (17 kB) 08:24:06 Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) 08:24:06 Using cached requests-2.32.3-py3-none-any.whl (64 kB) 08:24:06 Using cached certifi-2024.6.2-py3-none-any.whl (164 kB) 08:24:06 Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) 08:24:06 Using cached idna-3.7-py3-none-any.whl (66 kB) 08:24:06 Installing collected packages: appdirs, urllib3, PyYAML, portalocker, idna, charset-normalizer, certifi, requests, omero-py 08:24:09 Successfully installed PyYAML-6.0.1 appdirs-1.4.4 certifi-2024.6.2 charset-normalizer-3.3.2 idna-3.7 omero-py-5.19.2 portalocker-2.8.2 requests-2.32.3 urllib3-1.26.18 08:24:09 + pip install git+https://github.com/snoopycrimecop/omero-metadata.git@merge_ci#egg=omero-metadata 08:24:10 Collecting omero-metadata 08:24:10 Cloning https://github.com/snoopycrimecop/omero-metadata.git (to revision merge_ci) to /tmp/pip-install-vuoh4cl7/omero-metadata_e454c9c7fc774d6ab7f0b4060dda29e2 08:24:10 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-metadata.git /tmp/pip-install-vuoh4cl7/omero-metadata_e454c9c7fc774d6ab7f0b4060dda29e2 08:24:11 Resolved https://github.com/snoopycrimecop/omero-metadata.git to commit 2fa62c385f564ed11168f870a855a8006755b0f7 08:24:11 Installing build dependencies: started 08:24:13 Installing build dependencies: finished with status 'done' 08:24:13 Getting requirements to build wheel: started 08:24:14 Getting requirements to build wheel: finished with status 'done' 08:24:14 Installing backend dependencies: started 08:24:15 Installing backend dependencies: finished with status 'done' 08:24:15 Preparing metadata (pyproject.toml): started 08:24:15 Preparing metadata (pyproject.toml): finished with status 'done' 08:24:15 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-metadata) (5.19.2) 08:24:15 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-metadata) (6.0.1) 08:24:15 Requirement already satisfied: jinja2 in ./.venv3/lib/python3.9/site-packages (from omero-metadata) (3.1.4) 08:24:16 Collecting pandas (from omero-metadata) 08:24:16 Using cached pandas-2.2.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (19 kB) 08:24:16 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.26.18) 08:24:16 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.4.4) 08:24:16 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.0.0) 08:24:16 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.26.4) 08:24:16 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (10.3.0) 08:24:16 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (3.6.5) 08:24:16 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (2.32.3) 08:24:16 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (2.8.2) 08:24:16 Requirement already satisfied: MarkupSafe>=2.0 in ./.venv3/lib/python3.9/site-packages (from jinja2->omero-metadata) (2.1.5) 08:24:16 Collecting python-dateutil>=2.8.2 (from pandas->omero-metadata) 08:24:16 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB) 08:24:16 Collecting pytz>=2020.1 (from pandas->omero-metadata) 08:24:16 Using cached pytz-2024.1-py2.py3-none-any.whl.metadata (22 kB) 08:24:16 Collecting tzdata>=2022.7 (from pandas->omero-metadata) 08:24:16 Using cached tzdata-2024.1-py2.py3-none-any.whl.metadata (1.4 kB) 08:24:16 Requirement already satisfied: six>=1.5 in ./.venv3/lib/python3.9/site-packages (from python-dateutil>=2.8.2->pandas->omero-metadata) (1.16.0) 08:24:16 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.3.2) 08:24:16 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.7) 08:24:16 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2024.6.2) 08:24:16 Using cached pandas-2.2.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (13.1 MB) 08:24:16 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB) 08:24:16 Using cached pytz-2024.1-py2.py3-none-any.whl (505 kB) 08:24:16 Using cached tzdata-2024.1-py2.py3-none-any.whl (345 kB) 08:24:16 Building wheels for collected packages: omero-metadata 08:24:16 Building wheel for omero-metadata (pyproject.toml): started 08:24:17 Building wheel for omero-metadata (pyproject.toml): finished with status 'done' 08:24:17 Created wheel for omero-metadata: filename=omero_metadata-0.12.1.dev0-py3-none-any.whl size=39111 sha256=be12652ac2083ad4c12b3d4961ce7b3f43df6339e9d3d1cc775a737f9bbebe26 08:24:17 Stored in directory: /tmp/pip-ephem-wheel-cache-pwd8vh4o/wheels/64/09/47/3b86b706f8f6f4bec1b7fd6641d2e4a09814e754fa4c85c82d 08:24:17 Successfully built omero-metadata 08:24:17 Installing collected packages: pytz, tzdata, python-dateutil, pandas, omero-metadata 08:24:23 Successfully installed omero-metadata-0.12.1.dev0 pandas-2.2.2 python-dateutil-2.9.0.post0 pytz-2024.1 tzdata-2024.1 08:24:23 + pip install git+https://github.com/snoopycrimecop/omero-cli-render.git@merge_ci#egg=omero-cli-render 08:24:24 Collecting omero-cli-render 08:24:24 Cloning https://github.com/snoopycrimecop/omero-cli-render.git (to revision merge_ci) to /tmp/pip-install-dy6pjjg8/omero-cli-render_b2955f977c8c461d8db1bad9c6048c52 08:24:24 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-render.git /tmp/pip-install-dy6pjjg8/omero-cli-render_b2955f977c8c461d8db1bad9c6048c52 08:24:25 Running command git checkout -b merge_ci --track origin/merge_ci 08:24:25 Switched to a new branch 'merge_ci' 08:24:25 branch 'merge_ci' set up to track 'origin/merge_ci'. 08:24:25 Resolved https://github.com/snoopycrimecop/omero-cli-render.git to commit 426a1f91b2f89cd6d1d94ae7ab3c783024cf61a3 08:24:25 Installing build dependencies: started 08:24:27 Installing build dependencies: finished with status 'done' 08:24:27 Getting requirements to build wheel: started 08:24:27 Getting requirements to build wheel: finished with status 'done' 08:24:27 Installing backend dependencies: started 08:24:28 Installing backend dependencies: finished with status 'done' 08:24:28 Preparing metadata (pyproject.toml): started 08:24:29 Preparing metadata (pyproject.toml): finished with status 'done' 08:24:29 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-cli-render) (6.0.1) 08:24:29 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-cli-render) (5.19.2) 08:24:29 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.26.18) 08:24:29 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.4.4) 08:24:29 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.0.0) 08:24:29 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.26.4) 08:24:29 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (10.3.0) 08:24:29 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.6.5) 08:24:29 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.32.3) 08:24:29 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.8.2) 08:24:29 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.3.2) 08:24:29 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.7) 08:24:29 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2024.6.2) 08:24:29 Building wheels for collected packages: omero-cli-render 08:24:29 Building wheel for omero-cli-render (pyproject.toml): started 08:24:29 Building wheel for omero-cli-render (pyproject.toml): finished with status 'done' 08:24:29 Created wheel for omero-cli-render: filename=omero_cli_render-0.8.1.dev0-py3-none-any.whl size=18032 sha256=66d05155b5c4bbd5e47a0928f719cbd484c20c88045d62d15222cc361cfe7095 08:24:29 Stored in directory: /tmp/pip-ephem-wheel-cache-9e1i257i/wheels/58/32/1b/746489b3c7c17a98c6cd7195bdd3b426dd4137caeb1045a994 08:24:29 Successfully built omero-cli-render 08:24:29 Installing collected packages: omero-cli-render 08:24:29 Successfully installed omero-cli-render-0.8.1.dev0 08:24:29 + pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate 08:24:30 Collecting omero-cli-duplicate 08:24:30 Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-jbmbxri5/omero-cli-duplicate_ccf58cd3aed74fd791ed1f4349d5d1ac 08:24:30 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-jbmbxri5/omero-cli-duplicate_ccf58cd3aed74fd791ed1f4349d5d1ac 08:24:31 Running command git checkout -b merge_ci --track origin/merge_ci 08:24:31 Switched to a new branch 'merge_ci' 08:24:31 branch 'merge_ci' set up to track 'origin/merge_ci'. 08:24:31 Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit 883967f3445d4a3da0a0f428023417b46aa69331 08:24:31 Installing build dependencies: started 08:24:33 Installing build dependencies: finished with status 'done' 08:24:33 Getting requirements to build wheel: started 08:24:34 Getting requirements to build wheel: finished with status 'done' 08:24:34 Installing backend dependencies: started 08:24:35 Installing backend dependencies: finished with status 'done' 08:24:35 Preparing metadata (pyproject.toml): started 08:24:35 Preparing metadata (pyproject.toml): finished with status 'done' 08:24:35 Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib/python3.9/site-packages (from omero-cli-duplicate) (5.19.2) 08:24:35 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.26.18) 08:24:35 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4) 08:24:35 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0) 08:24:35 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.26.4) 08:24:35 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (10.3.0) 08:24:35 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.1) 08:24:35 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5) 08:24:35 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.32.3) 08:24:35 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.8.2) 08:24:35 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.3.2) 08:24:35 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.7) 08:24:35 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2024.6.2) 08:24:35 Building wheels for collected packages: omero-cli-duplicate 08:24:35 Building wheel for omero-cli-duplicate (pyproject.toml): started 08:24:35 Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done' 08:24:35 Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11443 sha256=8e58e2ad01b37a6d4526a175b2fb4bac131141254155cdaa334426f549e5bc3c 08:24:35 Stored in directory: /tmp/pip-ephem-wheel-cache-0m9j4uv3/wheels/f1/55/ac/0cb8b093a4c417e5157143839711e7613efa64eaa21c29ef84 08:24:35 Successfully built omero-cli-duplicate 08:24:36 Installing collected packages: omero-cli-duplicate 08:24:36 Successfully installed omero-cli-duplicate-0.4.1.dev0 08:24:36 + pip install omero-certificates 08:24:36 Collecting omero-certificates 08:24:36 Using cached omero_certificates-0.3.2-py3-none-any.whl.metadata (3.7 kB) 08:24:36 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-certificates) (5.19.2) 08:24:36 Collecting distro==1.8.0 (from omero-certificates) 08:24:36 Using cached distro-1.8.0-py3-none-any.whl.metadata (6.9 kB) 08:24:36 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.26.18) 08:24:36 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4) 08:24:36 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0) 08:24:36 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.26.4) 08:24:36 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (10.3.0) 08:24:36 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.1) 08:24:36 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5) 08:24:36 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (2.32.3) 08:24:36 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (2.8.2) 08:24:37 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.3.2) 08:24:37 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.7) 08:24:37 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2024.6.2) 08:24:37 Using cached omero_certificates-0.3.2-py3-none-any.whl (13 kB) 08:24:37 Using cached distro-1.8.0-py3-none-any.whl (20 kB) 08:24:37 Installing collected packages: distro, omero-certificates 08:24:37 Successfully installed distro-1.8.0 omero-certificates-0.3.2 08:24:37 + for x in *.tar.gz 08:24:37 + pip install -U omero_dropbox-5.7.1.dev0.tar.gz 08:24:37 Processing ./omero_dropbox-5.7.1.dev0.tar.gz 08:24:37 Installing build dependencies: started 08:24:40 Installing build dependencies: finished with status 'done' 08:24:40 Getting requirements to build wheel: started 08:24:40 Getting requirements to build wheel: finished with status 'done' 08:24:40 Installing backend dependencies: started 08:24:41 Installing backend dependencies: finished with status 'done' 08:24:41 Preparing metadata (pyproject.toml): started 08:24:41 Preparing metadata (pyproject.toml): finished with status 'done' 08:24:41 Requirement already satisfied: omero-py in ./.venv3/lib/python3.9/site-packages (from omero-dropbox==5.7.1.dev0) (5.19.2) 08:24:41 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.26.18) 08:24:41 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4) 08:24:41 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0) 08:24:41 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.26.4) 08:24:41 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (10.3.0) 08:24:41 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.1) 08:24:41 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5) 08:24:41 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.32.3) 08:24:41 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.8.2) 08:24:41 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.3.2) 08:24:41 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.7) 08:24:41 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2024.6.2) 08:24:41 Building wheels for collected packages: omero-dropbox 08:24:41 Building wheel for omero-dropbox (pyproject.toml): started 08:24:42 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done' 08:24:42 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49057 sha256=b857b89b7926e8df9ac3af62651fd4a677d4b590cd824a0390d154cf6f7cae3a 08:24:42 Stored in directory: /home/omero/.cache/pip/wheels/eb/76/85/58476368b176f793423899407c96293c22f9c9edc28cf54079 08:24:42 Successfully built omero-dropbox 08:24:42 Installing collected packages: omero-dropbox 08:24:42 Successfully installed omero-dropbox-5.7.1.dev0 08:24:42 + for x in *.tar.gz 08:24:42 + pip install -U omero_marshal-0.9.1.dev0.tar.gz 08:24:43 Processing ./omero_marshal-0.9.1.dev0.tar.gz 08:24:43 Installing build dependencies: started 08:24:45 Installing build dependencies: finished with status 'done' 08:24:45 Getting requirements to build wheel: started 08:24:45 Getting requirements to build wheel: finished with status 'done' 08:24:45 Installing backend dependencies: started 08:24:46 Installing backend dependencies: finished with status 'done' 08:24:46 Preparing metadata (pyproject.toml): started 08:24:47 Preparing metadata (pyproject.toml): finished with status 'done' 08:24:47 Building wheels for collected packages: omero_marshal 08:24:47 Building wheel for omero_marshal (pyproject.toml): started 08:24:47 Building wheel for omero_marshal (pyproject.toml): finished with status 'done' 08:24:47 Created wheel for omero_marshal: filename=omero_marshal-0.9.1.dev0-py3-none-any.whl size=88031 sha256=d2310b37df11b0a1aac00c9fbf6f5b9f6ea47ccceff57015f4707150ae492545 08:24:47 Stored in directory: /home/omero/.cache/pip/wheels/8b/40/f1/dbed071eff57c96e0824ead2a420a7a1a080f7fbdfe0431d7f 08:24:47 Successfully built omero_marshal 08:24:47 Installing collected packages: omero_marshal 08:24:47 Successfully installed omero_marshal-0.9.1.dev0 08:24:47 + for x in *.tar.gz 08:24:47 + pip install -U omero_py-5.19.3.dev0.tar.gz 08:24:48 Processing ./omero_py-5.19.3.dev0.tar.gz 08:24:48 Installing build dependencies: started 08:24:51 Installing build dependencies: finished with status 'done' 08:24:51 Getting requirements to build wheel: started 08:24:51 Getting requirements to build wheel: finished with status 'done' 08:24:51 Installing backend dependencies: started 08:24:52 Installing backend dependencies: finished with status 'done' 08:24:52 Preparing metadata (pyproject.toml): started 08:24:52 Preparing metadata (pyproject.toml): finished with status 'done' 08:24:52 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.3.dev0) (1.26.18) 08:24:52 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.3.dev0) (1.4.4) 08:24:52 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.3.dev0) (1.0.0) 08:24:52 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.3.dev0) (1.26.4) 08:24:52 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.3.dev0) (10.3.0) 08:24:52 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.3.dev0) (6.0.1) 08:24:52 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.3.dev0) (3.6.5) 08:24:52 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.3.dev0) (2.32.3) 08:24:52 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.3.dev0) (2.8.2) 08:24:52 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.3.dev0) (3.3.2) 08:24:52 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.3.dev0) (3.7) 08:24:52 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.3.dev0) (2024.6.2) 08:24:52 Building wheels for collected packages: omero-py 08:24:52 Building wheel for omero-py (pyproject.toml): started 08:24:53 Building wheel for omero-py (pyproject.toml): finished with status 'done' 08:24:53 Created wheel for omero-py: filename=omero_py-5.19.3.dev0-py3-none-any.whl size=2782728 sha256=91f0aa8002f556e2949ef521022a503042e0125b709995e8083cc2bdb0ae9390 08:24:53 Stored in directory: /home/omero/.cache/pip/wheels/da/30/d3/f2a83bdd6a0fbad84aa00dad9eb9431eedebb0e1310be5dd41 08:24:53 Successfully built omero-py 08:24:54 Installing collected packages: omero-py 08:24:54 Attempting uninstall: omero-py 08:24:54 Found existing installation: omero-py 5.19.2 08:24:54 Uninstalling omero-py-5.19.2: 08:24:54 Successfully uninstalled omero-py-5.19.2 08:24:56 Successfully installed omero-py-5.19.3.dev0 08:24:56 + for x in *.tar.gz 08:24:56 + pip install -U omero_scripts-5.8.3.dev0.tar.gz 08:24:57 Processing ./omero_scripts-5.8.3.dev0.tar.gz 08:24:57 Installing build dependencies: started 08:24:59 Installing build dependencies: finished with status 'done' 08:24:59 Getting requirements to build wheel: started 08:24:59 Getting requirements to build wheel: finished with status 'done' 08:24:59 Installing backend dependencies: started 08:25:00 Installing backend dependencies: finished with status 'done' 08:25:00 Preparing metadata (pyproject.toml): started 08:25:00 Preparing metadata (pyproject.toml): finished with status 'done' 08:25:00 Building wheels for collected packages: omero-scripts 08:25:00 Building wheel for omero-scripts (pyproject.toml): started 08:25:01 Building wheel for omero-scripts (pyproject.toml): finished with status 'done' 08:25:01 Created wheel for omero-scripts: filename=omero_scripts-5.8.3.dev0-py3-none-any.whl size=116568 sha256=1bc59e0cbc6d74ead3b37817c704dce9f674c0fd80a97b1b86e7992d4392a06c 08:25:01 Stored in directory: /home/omero/.cache/pip/wheels/73/b0/4e/389698a580647ec1c43b5854d9aab45dff88e4662759ee2446 08:25:01 Successfully built omero-scripts 08:25:01 Installing collected packages: omero-scripts 08:25:01 Successfully installed omero-scripts-5.8.3.dev0 08:25:01 + for x in *.tar.gz 08:25:01 + pip install -U omero_web-5.26.1.dev0.tar.gz 08:25:02 Processing ./omero_web-5.26.1.dev0.tar.gz 08:25:02 Installing build dependencies: started 08:25:04 Installing build dependencies: finished with status 'done' 08:25:04 Getting requirements to build wheel: started 08:25:04 Getting requirements to build wheel: finished with status 'done' 08:25:04 Installing backend dependencies: started 08:25:06 Installing backend dependencies: finished with status 'done' 08:25:06 Preparing metadata (pyproject.toml): started 08:25:06 Preparing metadata (pyproject.toml): finished with status 'done' 08:25:06 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.26.1.dev0) (5.19.3.dev0) 08:25:06 Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.26.1.dev0) 08:25:06 Using cached concurrent_log_handler-0.9.25-py3-none-any.whl.metadata (17 kB) 08:25:06 Collecting Django<4.3,>=4.2.3 (from omero-web==5.26.1.dev0) 08:25:06 Using cached Django-4.2.13-py3-none-any.whl.metadata (4.1 kB) 08:25:06 Collecting django-pipeline==2.1.0 (from omero-web==5.26.1.dev0) 08:25:07 Using cached django_pipeline-2.1.0-py3-none-any.whl.metadata (12 kB) 08:25:07 Collecting django-cors-headers==3.7.0 (from omero-web==5.26.1.dev0) 08:25:07 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB) 08:25:07 Collecting django-csp (from omero-web==5.26.1.dev0) 08:25:07 Using cached django_csp-3.8-py3-none-any.whl.metadata (2.7 kB) 08:25:07 Collecting whitenoise>=5.3.0 (from omero-web==5.26.1.dev0) 08:25:07 Using cached whitenoise-6.6.0-py3-none-any.whl.metadata (3.7 kB) 08:25:07 Collecting gunicorn>=19.3 (from omero-web==5.26.1.dev0) 08:25:07 Using cached gunicorn-22.0.0-py3-none-any.whl.metadata (4.4 kB) 08:25:07 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.26.1.dev0) (0.9.1.dev0) 08:25:07 Requirement already satisfied: Pillow in ./.venv3/lib/python3.9/site-packages (from omero-web==5.26.1.dev0) (10.3.0) 08:25:07 Requirement already satisfied: pytz in ./.venv3/lib/python3.9/site-packages (from omero-web==5.26.1.dev0) (2024.1) 08:25:07 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-web==5.26.1.dev0) (2.8.2) 08:25:07 Requirement already satisfied: packaging in ./.venv3/lib/python3.9/site-packages (from omero-web==5.26.1.dev0) (24.0) 08:25:07 Collecting asgiref<4,>=3.6.0 (from Django<4.3,>=4.2.3->omero-web==5.26.1.dev0) 08:25:07 Using cached asgiref-3.8.1-py3-none-any.whl.metadata (9.3 kB) 08:25:07 Collecting sqlparse>=0.3.1 (from Django<4.3,>=4.2.3->omero-web==5.26.1.dev0) 08:25:07 Using cached sqlparse-0.5.0-py3-none-any.whl.metadata (3.9 kB) 08:25:07 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.26.1.dev0) (1.26.18) 08:25:07 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.26.1.dev0) (1.4.4) 08:25:07 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.26.1.dev0) (1.0.0) 08:25:07 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.26.1.dev0) (1.26.4) 08:25:07 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.26.1.dev0) (6.0.1) 08:25:07 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.26.1.dev0) (3.6.5) 08:25:07 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.26.1.dev0) (2.32.3) 08:25:07 Collecting typing-extensions>=4 (from asgiref<4,>=3.6.0->Django<4.3,>=4.2.3->omero-web==5.26.1.dev0) 08:25:07 Using cached typing_extensions-4.12.1-py3-none-any.whl.metadata (3.0 kB) 08:25:07 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.26.1.dev0) (3.3.2) 08:25:07 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.26.1.dev0) (3.7) 08:25:07 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.26.1.dev0) (2024.6.2) 08:25:07 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB) 08:25:07 Using cached django_pipeline-2.1.0-py3-none-any.whl (38 kB) 08:25:07 Using cached concurrent_log_handler-0.9.25-py3-none-any.whl (25 kB) 08:25:07 Using cached Django-4.2.13-py3-none-any.whl (8.0 MB) 08:25:08 Using cached gunicorn-22.0.0-py3-none-any.whl (84 kB) 08:25:08 Using cached whitenoise-6.6.0-py3-none-any.whl (19 kB) 08:25:08 Using cached django_csp-3.8-py3-none-any.whl (17 kB) 08:25:08 Using cached asgiref-3.8.1-py3-none-any.whl (23 kB) 08:25:08 Using cached sqlparse-0.5.0-py3-none-any.whl (43 kB) 08:25:08 Using cached typing_extensions-4.12.1-py3-none-any.whl (37 kB) 08:25:08 Building wheels for collected packages: omero-web 08:25:08 Building wheel for omero-web (pyproject.toml): started 08:25:09 Building wheel for omero-web (pyproject.toml): finished with status 'done' 08:25:09 Created wheel for omero-web: filename=omero_web-5.26.1.dev0-py3-none-any.whl size=2763290 sha256=337225278fdfef2f98d13310369ca0f1d09df8fb43ce25ac5b198c18effc827d 08:25:09 Stored in directory: /home/omero/.cache/pip/wheels/39/0a/67/1d8a66c1c2b5dc08464077685312666fac69440af8767d0453 08:25:09 Successfully built omero-web 08:25:10 Installing collected packages: django-pipeline, whitenoise, typing-extensions, sqlparse, gunicorn, concurrent-log-handler, asgiref, Django, django-csp, django-cors-headers, omero-web 08:25:13 Successfully installed Django-4.2.13 asgiref-3.8.1 concurrent-log-handler-0.9.25 django-cors-headers-3.7.0 django-csp-3.8 django-pipeline-2.1.0 gunicorn-22.0.0 omero-web-5.26.1.dev0 sqlparse-0.5.0 typing-extensions-4.12.1 whitenoise-6.6.0 08:25:14 + wget https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 08:25:14 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file. 08:25:14 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled. 08:25:14 --2024-06-06 08:25:14-- https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 08:25:14 Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.110.133, 185.199.108.133, 185.199.109.133, ... 08:25:14 Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.110.133|:443... connected. 08:25:14 HTTP request sent, awaiting response... 200 OK 08:25:15 Length: 95703 (93K) [text/plain] 08:25:15 Saving to: ‘Figure_To_Pdf.py’ 08:25:15 08:25:15 0K .......... .......... .......... .......... .......... 53% 2.83M 0s 08:25:15 50K .......... .......... .......... .......... ... 100% 7.90M=0.02s 08:25:15 08:25:15 2024-06-06 08:25:15 (4.04 MB/s) - ‘Figure_To_Pdf.py’ saved [95703/95703] 08:25:15 08:25:15 + chmod 755 Figure_To_Pdf.py 08:25:15 + mv Figure_To_Pdf.py /home/omero/workspace/OMERO-server/OMERO.server/lib/scripts/omero/figure_scripts 08:25:15 + omero config set omero.db.name OMERO-server 08:25:17 + omero config set omero.db.host pg 08:25:19 + omero config set omero.db.user postgres 08:25:22 + omero config set omero.data.dir /home/omero/omero-server-data 08:25:24 + omero config set omero.fs.repo.path %user%_%userId%/%thread%//%year%-%month%/%day%/%time% 08:25:26 + omero config set omero.db.poolsize 25 08:25:29 + omero config set omero.security.trustStore /etc/pki/ca-trust/extracted/java/cacerts 08:25:31 + omero config set omero.security.trustStorePassword changeit 08:25:33 + omero config set omero.mail.config true 08:25:36 + omero config set omero.mail.from qa@openmicroscopy.org.uk 08:25:38 + omero config set omero.mail.host smtp.dundee.ac.uk 08:25:40 + omero config set omero.server.nodedescriptors master:Blitz-0,Indexer-0,Processor-0,Storm,Tables-0 08:25:43 + omero config set omero.jvmcfg.append '--add-opens java.base/java.lang=ALL-UNNAMED --add-exports java.naming/com.sun.jndi.ldap=ALL-UNNAMED' 08:25:45 + omero certificates 08:25:48 OpenSSL 3.0.7 1 Nov 2022 (Library: OpenSSL 3.0.7 1 Nov 2022) 08:25:48 certificates created: /home/omero/omero-server-data/certs/server.pem /home/omero/omero-server-data/certs/server.p12 08:25:48 + '[' false = true ']' 08:25:48 + echo 'Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade' 08:25:48 Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade 08:25:48 + omego db -vvv upgrade --serverdir /home/omero/workspace/OMERO-server/OMERO.server --dbname OMERO-server 08:25:48 2024-06-06 08:25:48,752 [ omego.db] DEBUG dbcommand => upgrade 08:25:48 2024-06-06 08:25:48,752 [ omego.db] DEBUG dbhost => localhost 08:25:48 2024-06-06 08:25:48,752 [ omego.db] DEBUG dbname => OMERO-server 08:25:48 2024-06-06 08:25:48,752 [ omego.db] DEBUG dbpass => omero 08:25:48 2024-06-06 08:25:48,753 [ omego.db] DEBUG dbuser => omero 08:25:48 2024-06-06 08:25:48,753 [ omego.db] DEBUG rootpass => omero 08:25:48 2024-06-06 08:25:48,753 [ omego.db] DEBUG serverdir => /home/omero/workspace/OMERO-server/OMERO.server 08:25:48 2024-06-06 08:25:48,753 [omego.extern] INFO Executing : omero version 08:25:50 OMERO.py version: 08:25:50 OMERO.server version: 08:25:50 5.6.3-469-db8274c741-ice36 08:25:50 5.19.3.dev0 08:25:51 2024-06-06 08:25:51,142 [omego.extern] INFO Completed [2.389 s] 08:25:51 2024-06-06 08:25:51,143 [omego.extern] DEBUG Using omero CLI from omero 08:25:51 2024-06-06 08:25:51,143 [ omego.db] INFO DbAdmin: DbAdmin /home/omero/workspace/OMERO-server/OMERO.server ... 08:25:51 2024-06-06 08:25:51,143 [omego.extern] INFO Running [current environment]: omero config get --show-password 08:25:51 2024-06-06 08:25:51,143 [omego.extern] INFO Executing : omero config get --show-password 08:25:54 2024-06-06 08:25:54,043 [omego.extern] INFO Completed [2.900 s] 08:25:54 2024-06-06 08:25:54,043 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero 08:25:54 2024-06-06 08:25:54,044 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t --version 08:25:54 2024-06-06 08:25:54,228 [omego.extern] INFO Completed [0.184 s] 08:25:54 2024-06-06 08:25:54,228 [ omego.db] DEBUG stdout: b'psql (PostgreSQL) 16.2\n' 08:25:54 2024-06-06 08:25:54,229 [ omego.db] INFO psql version: psql (PostgreSQL) 16.2 08:25:54 08:25:54 2024-06-06 08:25:54,229 [omego.extern] INFO Running [current environment]: omero config get --show-password 08:25:54 2024-06-06 08:25:54,229 [omego.extern] INFO Executing : omero config get --show-password 08:25:56 2024-06-06 08:25:56,589 [omego.extern] INFO Completed [2.360 s] 08:25:56 2024-06-06 08:25:56,590 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero 08:25:56 2024-06-06 08:25:56,590 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c \conninfo 08:25:56 2024-06-06 08:25:56,697 [omego.extern] INFO Completed [0.107 s] 08:25:56 2024-06-06 08:25:56,698 [ omego.db] DEBUG stdout: b'You are connected to database "OMERO-server" as user "postgres" on host "pg" (address "172.19.0.7") at port "5432".\n' 08:25:56 2024-06-06 08:25:56,698 [ omego.db] DEBUG Executing query: SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1 08:25:56 2024-06-06 08:25:56,698 [omego.extern] INFO Running [current environment]: omero config get --show-password 08:25:56 2024-06-06 08:25:56,698 [omego.extern] INFO Executing : omero config get --show-password 08:25:59 2024-06-06 08:25:59,049 [omego.extern] INFO Completed [2.351 s] 08:25:59 2024-06-06 08:25:59,050 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero 08:25:59 2024-06-06 08:25:59,050 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1 08:25:59 2024-06-06 08:25:59,139 [omego.extern] INFO Completed [0.089 s] 08:25:59 2024-06-06 08:25:59,139 [ omego.db] DEBUG stdout: b'OMERO5.4|0\n' 08:25:59 2024-06-06 08:25:59,139 [ omego.db] INFO Current omero db version: ('OMERO5.4', '0') 08:25:59 2024-06-06 08:25:59,143 [ omego.db] INFO Database is already at OMERO5.4__0 08:25:59 + export LANG=en_US.UTF-8 08:25:59 + LANG=en_US.UTF-8 08:25:59 + export LANGUAGE=en_US:en 08:25:59 + LANGUAGE=en_US:en 08:25:59 + export LC_ALL=en_US.UTF-8 08:25:59 + LC_ALL=en_US.UTF-8 08:25:59 + BUILD_ID=DONT_KILL_ME 08:25:59 + omero admin start 08:26:13 No descriptor given. Using etc/grid/default.xml 08:26:30 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/master 08:26:30 Initializing /home/omero/workspace/OMERO-server/OMERO.server/var/log 08:26:30 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/registry 08:26:30 Waiting on startup. Use CTRL-C to exit 08:26:30 + omero admin waitup 08:26:33 Waiting on startup. Use CTRL-C to exit 08:26:33 + omero admin diagnostics 08:26:35 08:26:35 ================================================================================ 08:26:35 OMERO Diagnostics (admin) 08:26:35 ================================================================================ 08:26:35 08:26:35 Commands: java -version 17.0.11 (/usr/bin/java) 08:26:35 Commands: python -V 3.9.18 (/home/omero/workspace/OMERO-server/.venv3/bin/python) 08:26:35 Commands: icegridnode --version 3.6.5 (/opt/ice-3.6.5/bin/icegridnode) 08:26:35 Commands: icegridadmin --version 3.6.5 (/opt/ice-3.6.5/bin/icegridadmin) 08:26:35 Commands: psql --version 16.2 (/usr/bin/psql) 08:26:35 Commands: openssl version 3.0.71 (/usr/bin/openssl) 08:26:35 08:26:35 Component: OMERO.py 5.19.3.dev0 08:26:35 Component: OMERO.server 5.6.3-469-db8274c741-ice36 08:26:35 08:26:35 Server: icegridnode running 08:26:35 Server: Blitz-0 active (pid = 13404, enabled) 08:26:35 Server: Indexer-0 active (pid = 13428, enabled) 08:26:35 Server: OMERO.Glacier2 active (pid = 13432, enabled) 08:26:35 Server: OMERO.IceStorm active (pid = 13462, enabled) 08:26:35 Server: Processor-0 activating (enabled) 08:26:35 Server: Tables-0 activating (enabled) 08:26:35 08:26:35 Log dir: /home/omero/workspace/OMERO-server/OMERO.server/var/log exists 08:26:35 Log files: Blitz-0.log 21.7 KB errors=0 warnings=1 08:26:35 Log files: DropBox.log n/a 08:26:35 Log files: FileServer.log n/a 08:26:35 Log files: Indexer-0.log 2.6 KB 08:26:35 Log files: MonitorServer.log n/a 08:26:35 Log files: Processor-0.log 592 B 08:26:35 Log files: Tables-0.log 841 B 08:26:35 Log files: TestDropBox.log n/a 08:26:35 Log files: master.err empty 08:26:35 Log files: master.out 30.1 KB 08:26:35 Log files: Total size 0.06 MB 08:26:35 08:26:35 08:26:35 Environment:OMERO_HOME=(unset) 08:26:35 Environment:OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server 08:26:35 Environment:OMERO_NODE=(unset) 08:26:35 Environment:OMERO_MASTER=(unset) 08:26:35 Environment:OMERO_USERDIR=(unset) 08:26:35 Environment:OMERO_TMPDIR=(unset) 08:26:35 Environment:PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 08:26:35 Environment:PYTHONPATH=(unset) 08:26:35 Environment:ICE_HOME=/opt/ice-3.6.5 08:26:35 Environment:LD_LIBRARY_PATH=(unset) 08:26:35 Environment:DYLD_LIBRARY_PATH=(unset) 08:26:35 08:26:35 OMERO SSL port:4064 08:26:35 OMERO TCP port:4063 08:26:35 OMERO data dir:'/home/omero/omero-server-data' Exists? True Is writable? True 08:26:35 OMERO temp dir:'/home/omero/omero/tmp' Exists? True Is writable? True (Size: 0) 08:26:35 08:26:35 JVM settings: Blitz-${index} -Xmx7200m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions 08:26:35 JVM settings: Indexer-${index} -Xmx4800m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions 08:26:35 JVM settings: PixelData-${index} -Xmx7200m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions 08:26:35 JVM settings: Repository-${index} -Xmx4800m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions 08:26:35 08:26:35 Jar: lib/server/formats-api.jar Bio-Formats API 8.0.0-SNAPSHOT 6 June 2024 4b635bb58553ff405996eddfab5d7123981f4e78 08:26:35 Jar: lib/server/formats-bsd.jar BSD Bio-Formats readers and writers 8.0.0-SNAPSHOT 6 June 2024 4b635bb58553ff405996eddfab5d7123981f4e78 08:26:35 Jar: lib/server/formats-gpl.jar Bio-Formats library 8.0.0-SNAPSHOT 6 June 2024 4b635bb58553ff405996eddfab5d7123981f4e78 08:26:35 Jar: lib/server/ome-codecs.jar OME Codecs 1.0.4-SNAPSHOT 6 June 2024 9bb5310d7974e82c2e4a9f0455649e99f50b7354 08:26:35 Jar: lib/server/ome-common.jar OME Common Java 6.0.23-SNAPSHOT 6 June 2024 9bb5310d7974e82c2e4a9f0455649e99f50b7354 08:26:35 Jar: lib/server/ome-jai.jar OME JAI 0.1.5-SNAPSHOT 6 June 2024 9bb5310d7974e82c2e4a9f0455649e99f50b7354 08:26:35 Jar: lib/server/ome-mdbtools.jar MDB Tools (Java port) 5.3.4-SNAPSHOT 6 June 2024 9bb5310d7974e82c2e4a9f0455649e99f50b7354 08:26:35 Jar: lib/server/ome-poi.jar OME POI 5.3.10-SNAPSHOT 6 June 2024 9bb5310d7974e82c2e4a9f0455649e99f50b7354 08:26:35 Jar: lib/server/ome-xml.jar OME XML library 6.3.7-SNAPSHOT 6 June 2024 9bb5310d7974e82c2e4a9f0455649e99f50b7354 08:26:35 Jar: lib/server/omero-blitz.jar jar 5.7.4-SNAPSHOT 08:26:35 Jar: lib/server/omero-common.jar jar 5.6.7-SNAPSHOT 08:26:35 Jar: lib/server/omero-gateway.jar jar 5.9.2-SNAPSHOT 08:26:35 Jar: lib/server/omero-model.jar jar 5.6.15-SNAPSHOT 08:26:35 Jar: lib/server/omero-renderer.jar jar 5.5.17-SNAPSHOT 08:26:35 Jar: lib/server/omero-romio.jar jar 5.7.7-SNAPSHOT 08:26:35 Jar: lib/server/omero-server.jar jar 5.6.12-SNAPSHOT 08:26:35 + deactivate 08:26:35 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']' 08:26:35 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 08:26:35 + export PATH 08:26:35 + unset _OLD_VIRTUAL_PATH 08:26:35 + '[' -n '' ']' 08:26:35 + '[' -n /bin/bash -o -n '' ']' 08:26:35 + hash -r 08:26:35 + '[' -n '' ']' 08:26:35 + unset VIRTUAL_ENV 08:26:35 + '[' '!' '' = nondestructive ']' 08:26:35 + unset -f deactivate 08:26:35 Finished: SUCCESS